View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0292_low_3 (Length: 371)
Name: NF0292_low_3
Description: NF0292
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0292_low_3 |
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Alignment Details
Target: chr7 (Bit Score: 319; Significance: 1e-180; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 319; E-Value: 1e-180
Query Start/End: Original strand, 20 - 342
Target Start/End: Original strand, 22121493 - 22121815
Alignment:
| Q |
20 |
ctccttcataagaactagcctcaaaatttgtaactgcttcccttccattgcattttatagcagccttatcatacgctctggaatcatcaatacagcaatt |
119 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22121493 |
ctccttcataagaactagcctcaaaatttgtaactgcttcccttccattgcattttatagcagccttatcatacgctctggaatcatcaatacagcaatt |
22121592 |
T |
|
| Q |
120 |
aagtcaataacacaacatgtagaaaagaaaatataaaagtaaataatccaaaatatttaattaggcatttcatttgagatatcctgatatatatgattga |
219 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
22121593 |
aagtcaataacacaacatgtagaaaagaaaatataaaagtaaataatccaaaatatttaattaggcatttcatttgagatatcctgatatatatgatcga |
22121692 |
T |
|
| Q |
220 |
taaattaaaaccttgcagcatctagctcgctatcaaaaagcccaagatatatatacctacataaacccagaccaatataattaaaaacccagaccaatat |
319 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22121693 |
taaattaaaaccttgcagcatctagctcgctatcaaaaagcccaagatatatatacctacataaacccagaccaatataattaaaaacccagaccaatat |
22121792 |
T |
|
| Q |
320 |
aattaagaactaaatactggttt |
342 |
Q |
| |
|
||||||||||||||||||||||| |
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| T |
22121793 |
aattaagaactaaatactggttt |
22121815 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 319; E-Value: 1e-180
Query Start/End: Original strand, 20 - 342
Target Start/End: Complemental strand, 40512980 - 40512658
Alignment:
| Q |
20 |
ctccttcataagaactagcctcaaaatttgtaactgcttcccttccattgcattttatagcagccttatcatacgctctggaatcatcaatacagcaatt |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
40512980 |
ctccttcataagaactagcctcaaaatttgtaactgcttcccttccattgcattttatagcagccttatcatacgctctggaatcatcaatacagcaatt |
40512881 |
T |
|
| Q |
120 |
aagtcaataacacaacatgtagaaaagaaaatataaaagtaaataatccaaaatatttaattaggcatttcatttgagatatcctgatatatatgattga |
219 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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|
| T |
40512880 |
aagtcaataacacaacatgtagaaaagaaaatataaaagtaaataatccaaaatatttaattaggcatttcatttgagatatcctgatatatatgatcga |
40512781 |
T |
|
| Q |
220 |
taaattaaaaccttgcagcatctagctcgctatcaaaaagcccaagatatatatacctacataaacccagaccaatataattaaaaacccagaccaatat |
319 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40512780 |
taaattaaaaccttgcagcatctagctcgctatcaaaaagcccaagatatatatacctacataaacccagaccaatataattaaaaacccagaccaatat |
40512681 |
T |
|
| Q |
320 |
aattaagaactaaatactggttt |
342 |
Q |
| |
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||||||||||||||||||||||| |
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|
| T |
40512680 |
aattaagaactaaatactggttt |
40512658 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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