View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0294_low_10 (Length: 236)

Name: NF0294_low_10
Description: NF0294
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0294_low_10
NF0294_low_10
[»] chr4 (19 HSPs)
chr4 (1-157)||(10104337-10104494)
chr4 (1-110)||(15675176-15675286)
chr4 (1-111)||(13246495-13246606)
chr4 (1-74)||(121992-122065)
chr4 (1-110)||(31115695-31115805)
chr4 (1-110)||(54118331-54118441)
chr4 (1-112)||(47357718-47357831)
chr4 (101-157)||(10644219-10644275)
chr4 (38-157)||(40885678-40885798)
chr4 (1-112)||(10644283-10644396)
chr4 (101-157)||(47357654-47357710)
chr4 (1-112)||(13048308-13048421)
chr4 (99-157)||(111395-111453)
chr4 (113-157)||(26680201-26680245)
chr4 (113-157)||(54118463-54118507)
chr4 (108-149)||(13048436-13048477)
chr4 (113-157)||(13246430-13246474)
chr4 (113-157)||(15675308-15675352)
chr4 (113-157)||(31115629-31115673)
[»] chr1 (25 HSPs)
chr1 (1-153)||(45051446-45051599)
chr1 (2-110)||(41394288-41394397)
chr1 (1-112)||(22227873-22227985)
chr1 (1-112)||(22232570-22232682)
chr1 (1-111)||(20931410-20931521)
chr1 (1-112)||(20893713-20893825)
chr1 (1-111)||(2116319-2116431)
chr1 (1-111)||(20913102-20913206)
chr1 (1-111)||(20445744-20445855)
chr1 (1-111)||(20531509-20531620)
chr1 (99-157)||(22227809-22227867)
chr1 (99-157)||(22232506-22232564)
chr1 (1-112)||(5072463-5072576)
chr1 (1-112)||(18601193-18601306)
chr1 (1-111)||(37844537-37844649)
chr1 (113-157)||(20913037-20913081)
chr1 (116-157)||(5072599-5072640)
chr1 (116-157)||(18601329-18601370)
chr1 (99-157)||(37844656-37844714)
chr1 (113-153)||(2116258-2116298)
chr1 (113-157)||(20445679-20445723)
chr1 (113-157)||(20531444-20531488)
chr1 (113-157)||(20931345-20931389)
chr1 (113-157)||(41394222-41394266)
chr1 (113-157)||(20893845-20893889)
[»] scaffold0413 (1 HSPs)
scaffold0413 (1-157)||(6151-6326)
[»] scaffold0266 (4 HSPs)
scaffold0266 (1-111)||(1189-1300)
scaffold0266 (1-111)||(3669-3780)
scaffold0266 (110-155)||(3798-3843)
scaffold0266 (113-157)||(1124-1168)
[»] scaffold0025 (4 HSPs)
scaffold0025 (1-111)||(148786-148897)
scaffold0025 (1-110)||(8915-9025)
scaffold0025 (113-157)||(8849-8893)
scaffold0025 (113-157)||(148721-148765)
[»] chr5 (29 HSPs)
chr5 (1-111)||(23507030-23507141)
chr5 (1-111)||(29188359-29188470)
chr5 (1-110)||(22053920-22054030)
chr5 (1-111)||(27182634-27182745)
chr5 (1-110)||(18531154-18531264)
chr5 (4-110)||(34939344-34939450)
chr5 (101-157)||(12374-12430)
chr5 (101-157)||(18778188-18778244)
chr5 (101-157)||(21073791-21073847)
chr5 (101-157)||(22366677-22366733)
chr5 (101-157)||(25426628-25426684)
chr5 (1-112)||(27009905-27010018)
chr5 (101-157)||(43443591-43443647)
chr5 (1-112)||(19499963-19500076)
chr5 (1-112)||(43443470-43443583)
chr5 (101-157)||(19499899-19499955)
chr5 (1-100)||(18778067-18778168)
chr5 (101-157)||(4200181-4200237)
chr5 (113-157)||(23506965-23507009)
chr5 (101-157)||(27009841-27009897)
chr5 (1-100)||(21073670-21073771)
chr5 (1-100)||(22366556-22366657)
chr5 (1-100)||(25426704-25426805)
chr5 (1-100)||(12450-12551)
chr5 (1-112)||(4200060-4200173)
chr5 (113-157)||(27182766-27182810)
chr5 (113-153)||(29190482-29190522)
chr5 (116-157)||(17471803-17471844)
chr5 (113-157)||(22054052-22054096)
[»] scaffold0498 (2 HSPs)
scaffold0498 (1-111)||(8943-9054)
scaffold0498 (110-157)||(8878-8925)
[»] chr8 (28 HSPs)
chr8 (1-111)||(43373555-43373666)
chr8 (1-111)||(16193803-16193914)
chr8 (1-110)||(6774333-6774443)
chr8 (1-111)||(24549047-24549158)
chr8 (1-110)||(16405062-16405169)
chr8 (4-110)||(17345636-17345742)
chr8 (1-112)||(21844647-21844760)
chr8 (1-112)||(21852040-21852153)
chr8 (1-112)||(30120786-30120899)
chr8 (101-157)||(222887-222943)
chr8 (101-157)||(736510-736566)
chr8 (101-157)||(860405-860461)
chr8 (1-72)||(24928878-24928949)
chr8 (1-112)||(16674467-16674580)
chr8 (107-157)||(30120722-30120772)
chr8 (1-100)||(222766-222867)
chr8 (1-100)||(736389-736490)
chr8 (1-100)||(860284-860385)
chr8 (113-157)||(43373687-43373731)
chr8 (99-146)||(24928996-24929043)
chr8 (107-157)||(21844774-21844824)
chr8 (107-157)||(21852167-21852217)
chr8 (108-157)||(16674595-16674644)
chr8 (113-157)||(22907432-22907476)
chr8 (113-158)||(16193935-16193980)
chr8 (113-153)||(24548986-24549026)
chr8 (113-153)||(6774465-6774505)
chr8 (113-157)||(16405191-16405235)
[»] chr7 (27 HSPs)
chr7 (1-111)||(18253922-18254033)
chr7 (5-111)||(16211831-16211938)
chr7 (1-110)||(47481118-47481228)
chr7 (1-108)||(36052735-36052840)
chr7 (1-111)||(11580826-11580937)
chr7 (1-110)||(16479037-16479147)
chr7 (1-112)||(3060030-3060142)
chr7 (5-112)||(13037105-13037213)
chr7 (1-112)||(2437521-2437634)
chr7 (1-112)||(13572740-13572853)
chr7 (1-112)||(10989474-10989586)
chr7 (107-157)||(10989410-10989460)
chr7 (101-157)||(13911221-13911277)
chr7 (38-110)||(13321080-13321154)
chr7 (107-157)||(2437457-2437507)
chr7 (1-112)||(25292425-25292537)
chr7 (113-157)||(36052667-36052711)
chr7 (110-157)||(18254051-18254098)
chr7 (1-112)||(13911099-13911213)
chr7 (113-157)||(7293017-7293061)
chr7 (113-157)||(16479169-16479213)
chr7 (113-157)||(47481250-47481294)
chr7 (5-108)||(296057-296162)
chr7 (101-151)||(25292545-25292595)
chr7 (116-157)||(13572676-13572717)
chr7 (113-157)||(3059966-3060010)
chr7 (113-157)||(13037233-13037277)
[»] chr3 (39 HSPs)
chr3 (1-111)||(51158105-51158216)
chr3 (1-111)||(15936714-15936825)
chr3 (1-111)||(15938556-15938667)
chr3 (5-111)||(14842652-14842759)
chr3 (1-111)||(15859111-15859222)
chr3 (1-111)||(2049875-2049986)
chr3 (1-111)||(12030234-12030345)
chr3 (1-111)||(15614899-15615010)
chr3 (1-111)||(13838959-13839070)
chr3 (99-157)||(14842766-14842824)
chr3 (1-112)||(41270139-41270252)
chr3 (1-112)||(55316283-55316396)
chr3 (101-157)||(16821139-16821195)
chr3 (1-112)||(13975808-13975921)
chr3 (1-112)||(16821203-16821316)
chr3 (1-112)||(45860869-45860982)
chr3 (110-157)||(15936843-15936890)
chr3 (108-157)||(13955104-13955153)
chr3 (108-157)||(13975936-13975985)
chr3 (116-157)||(41270075-41270116)
chr3 (108-157)||(45860805-45860854)
chr3 (116-157)||(55316219-55316260)
chr3 (113-157)||(2049810-2049854)
chr3 (113-157)||(12030366-12030410)
chr3 (113-157)||(15859243-15859287)
chr3 (110-154)||(15938685-15938729)
chr3 (99-157)||(17912686-17912744)
chr3 (1-112)||(13954976-13955089)
chr3 (116-157)||(15468555-15468596)
chr3 (113-158)||(51158237-51158282)
chr3 (113-153)||(15614838-15614878)
chr3 (113-157)||(16744333-16744377)
chr3 (1-110)||(17912569-17912678)
chr3 (99-157)||(47984650-47984708)
chr3 (99-157)||(48003224-48003282)
chr3 (116-157)||(22275209-22275250)
chr3 (38-74)||(11986291-11986327)
chr3 (113-157)||(47993937-47993981)
chr3 (113-157)||(48012510-48012554)
[»] scaffold0175 (1 HSPs)
scaffold0175 (1-157)||(1043-1218)
[»] scaffold0026 (4 HSPs)
scaffold0026 (1-111)||(107812-107923)
scaffold0026 (1-112)||(64603-64716)
scaffold0026 (110-157)||(107747-107794)
scaffold0026 (116-157)||(64739-64780)
[»] chr2 (22 HSPs)
chr2 (1-111)||(462803-462914)
chr2 (1-110)||(36982528-36982638)
chr2 (1-111)||(8891307-8891418)
chr2 (1-110)||(19794791-19794901)
chr2 (1-110)||(24341476-24341586)
chr2 (1-111)||(20627400-20627511)
chr2 (1-110)||(7507931-7508041)
chr2 (1-74)||(25265477-25265550)
chr2 (101-157)||(19886857-19886913)
chr2 (1-106)||(43643044-43643150)
chr2 (1-112)||(17396739-17396852)
chr2 (113-157)||(19794923-19794967)
chr2 (113-157)||(7508063-7508107)
chr2 (101-157)||(17396860-17396916)
chr2 (110-152)||(462743-462785)
chr2 (1-100)||(19886736-19886837)
chr2 (113-157)||(8891242-8891286)
chr2 (113-157)||(24341608-24341652)
chr2 (113-157)||(36982660-36982704)
chr2 (113-157)||(43643176-43643220)
chr2 (99-157)||(25265595-25265653)
chr2 (113-157)||(20627532-20627576)
[»] scaffold0195 (4 HSPs)
scaffold0195 (1-110)||(19272-19382)
scaffold0195 (1-110)||(21356-21466)
scaffold0195 (113-157)||(19206-19250)
scaffold0195 (113-157)||(21290-21334)
[»] scaffold0049 (2 HSPs)
scaffold0049 (1-110)||(48253-48363)
scaffold0049 (110-157)||(48187-48234)
[»] scaffold0022 (2 HSPs)
scaffold0022 (1-112)||(5291-5403)
scaffold0022 (116-157)||(5426-5466)
[»] scaffold0302 (2 HSPs)
scaffold0302 (3-112)||(12179-12287)
scaffold0302 (116-157)||(12115-12156)
[»] scaffold0218 (2 HSPs)
scaffold0218 (3-111)||(5150-5259)
scaffold0218 (110-157)||(5277-5324)
[»] scaffold0162 (3 HSPs)
scaffold0162 (3-111)||(26504-26613)
scaffold0162 (1-74)||(8267-8340)
scaffold0162 (110-157)||(26631-26678)
[»] scaffold0215 (4 HSPs)
scaffold0215 (1-111)||(9424-9535)
scaffold0215 (1-111)||(16322-16433)
scaffold0215 (113-153)||(9556-9596)
scaffold0215 (113-153)||(16454-16494)
[»] scaffold0106 (1 HSPs)
scaffold0106 (1-111)||(41794-41905)
[»] scaffold0023 (4 HSPs)
scaffold0023 (1-111)||(48663-48774)
scaffold0023 (108-157)||(36093-36142)
scaffold0023 (1-112)||(36157-36270)
scaffold0023 (113-157)||(48598-48642)
[»] chr6 (17 HSPs)
chr6 (1-110)||(1650180-1650290)
chr6 (1-111)||(14626205-14626316)
chr6 (1-111)||(23153512-23153623)
chr6 (4-110)||(1657838-1657944)
chr6 (1-74)||(35009526-35009599)
chr6 (101-157)||(25175563-25175619)
chr6 (38-157)||(29665892-29666012)
chr6 (101-157)||(27654179-27654235)
chr6 (4-99)||(15862549-15862644)
chr6 (1-112)||(27654058-27654171)
chr6 (102-157)||(16825951-16826006)
chr6 (38-107)||(27740907-27740977)
chr6 (1-112)||(16825829-16825942)
chr6 (1-100)||(25175639-25175740)
chr6 (99-157)||(35009644-35009702)
chr6 (113-153)||(14626337-14626377)
chr6 (113-153)||(1650312-1650352)
[»] scaffold0139 (4 HSPs)
scaffold0139 (1-112)||(21191-21303)
scaffold0139 (1-112)||(14136-14248)
scaffold0139 (101-157)||(14256-14312)
scaffold0139 (101-157)||(21311-21367)
[»] scaffold0011 (2 HSPs)
scaffold0011 (1-111)||(123251-123362)
scaffold0011 (113-157)||(123383-123427)
[»] scaffold0008 (4 HSPs)
scaffold0008 (1-111)||(128256-128366)
scaffold0008 (107-157)||(31878-31928)
scaffold0008 (110-157)||(128384-128431)
scaffold0008 (1-112)||(31750-31864)
[»] scaffold0369 (2 HSPs)
scaffold0369 (1-112)||(3786-3899)
scaffold0369 (99-157)||(3722-3780)
[»] scaffold0012 (2 HSPs)
scaffold0012 (5-112)||(247533-247641)
scaffold0012 (113-146)||(247661-247694)
[»] scaffold0529 (1 HSPs)
scaffold0529 (1-110)||(3028-3139)
[»] scaffold0077 (2 HSPs)
scaffold0077 (1-111)||(37000-37111)
scaffold0077 (113-157)||(37132-37176)
[»] scaffold0420 (1 HSPs)
scaffold0420 (1-80)||(13400-13479)
[»] scaffold0001 (2 HSPs)
scaffold0001 (1-111)||(171970-172081)
scaffold0001 (1-111)||(177673-177784)
[»] scaffold1560 (1 HSPs)
scaffold1560 (99-157)||(57-115)
[»] scaffold0104 (1 HSPs)
scaffold0104 (99-157)||(48514-48572)
[»] scaffold0009 (2 HSPs)
scaffold0009 (1-110)||(272091-272201)
scaffold0009 (113-151)||(272031-272069)
[»] scaffold0132 (1 HSPs)
scaffold0132 (1-74)||(13609-13682)
[»] scaffold0125 (2 HSPs)
scaffold0125 (1-74)||(41751-41824)
scaffold0125 (113-157)||(41648-41692)
[»] scaffold0361 (1 HSPs)
scaffold0361 (38-155)||(3210-3328)
[»] scaffold0772 (1 HSPs)
scaffold0772 (1-112)||(5592-5705)
[»] scaffold0116 (2 HSPs)
scaffold0116 (1-112)||(99-212)
scaffold0116 (101-157)||(35-91)
[»] scaffold0076 (2 HSPs)
scaffold0076 (1-112)||(43061-43174)
scaffold0076 (101-157)||(42997-43053)
[»] scaffold1542 (2 HSPs)
scaffold1542 (1-111)||(621-732)
scaffold1542 (99-157)||(739-797)
[»] scaffold0075 (2 HSPs)
scaffold0075 (1-110)||(34547-34658)
scaffold0075 (113-157)||(34680-34724)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-60)||(51269-51328)
[»] scaffold0622 (1 HSPs)
scaffold0622 (99-157)||(9382-9440)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-74)||(89541-89614)
[»] scaffold1711 (1 HSPs)
scaffold1711 (1-61)||(1379-1439)
[»] scaffold0078 (1 HSPs)
scaffold0078 (113-157)||(37284-37328)
[»] scaffold0084 (1 HSPs)
scaffold0084 (38-74)||(56224-56260)


Alignment Details
Target: chr4 (Bit Score: 98; Significance: 2e-48; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 10104337 - 10104494
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggt-aattgaggtttgattcttgttca 99  Q
    ||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||||| | ||||||| | |||||| ||||||    
T  10104337 attacatgttcaattatgtaaaaatgtgaagttgtgaaaattgtgctcaattggtgaattttgctaagttgttgttgaattgagatatgattcatgttca 10104436  T
Q  100 attgatgttatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||||||| |  ||||||||| ||||||||||||| |||||||||| ||||||||||    
T  10104437 attgatgttgttgttgatgaatcattgcttgggtatacatattcatgaattgatgatg 10104494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 15675176 - 15675286
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggt-aattgaggtttgattcttgttca 99  Q
    ||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||||| | ||||||| | |||||| ||||||    
T  15675176 attacatgttcaattatgtaaaaatgtgaagttgtgaaaattgtgctcaattggtgaattttgctaagttgttgttgaattgagatatgattcatgttca 15675275  T
Q  100 attgatgttat 110  Q
    |||||||||||    
T  15675276 attgatgttat 15675286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 13246606 - 13246495
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggta-attgaggtttgattcttgttca 99  Q
    ||||||||||||| || | | |||||||||||||| |||||||||||||||||||||||||||||||||||||| || |||||| | |||||||||||||    
T  13246606 attacatgttcaaataggaacaaatgataagttgtgaaaattgtgctcaattggtgaattttgctaagttgttgttagattgagttatgattcttgttca 13246507  T
Q  100 attgatgttatg 111  Q
    ||||||||||||    
T  13246506 attgatgttatg 13246495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 122065 - 121992
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttg 74  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  122065 attacatgttcaaatatgtaaaaatgataagttgtgaaaattgtgctcaattggtgaattttgctaagttgttg 121992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 31115805 - 31115695
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggt-aattgaggtttgattcttgttca 99  Q
    ||||||||||| ||||||||||||||  ||||||| |||||| ||||||||||||||||||| ||||||||||| | ||||||| | |||||| ||||||    
T  31115805 attacatgttccattatgtaaaaatgtgaagttgtgaaaattatgctcaattggtgaattttcctaagttgttgttgaattgagatatgattcatgttca 31115706  T
Q  100 attgatgttat 110  Q
    |||||||||||    
T  31115705 attgatgttat 31115695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 54118331 - 54118441
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggta-attgaggtttgattcttgttca 99  Q
    ||||||||||||| || | | || ||||||||||| |||||||||||||||||||||||||||||||||||||| || ||| || | |||||||||||||    
T  54118331 attacatgttcaaataggaacaattgataagttgtgaaaattgtgctcaattggtgaattttgctaagttgttgttagatttagttatgattcttgttca 54118430  T
Q  100 attgatgttat 110  Q
    |||||||||||    
T  54118431 attgatgttat 54118441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 47357831 - 47357718
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattt-tgctaagttgttggtaa-ttgaggtttgattcttgttc 98  Q
    ||||||||||||  |||| |||||||||||||| | || |||||||| ||||||||||||| | ||||||||||| ||| ||||| | ||||||||||||    
T  47357831 attacatgttcatatatgcaaaaatgataagttatgaagattgtgctaaattggtgaatttctcctaagttgttgttaatttgagttgtgattcttgttc 47357732  T
Q  99 aattgatgttatga 112  Q
    || |||||||||||    
T  47357731 aaatgatgttatga 47357718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 157
Target Start/End: Complemental strand, 10644275 - 10644219
Alignment:
Q  101 ttgatgttatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  10644275 ttgatattatgattgatgaataattgcttgggtttgcatattcatggattgatgatg 10644219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 38 - 157
Target Start/End: Original strand, 40885678 - 40885798
Alignment:
Q  38 aaattgtgctcaattggtgaattttgctaagttgttggt-aattgaggtttgattcttgttcaattgatgttatgattgatgaataattgcttgggtatg 136  Q
    ||||| ||||||||||||||| ||||||||||| ||| | ||||||| | |||||| ||||||||||||||| |  ||||||||| || |||| ||||||    
T  40885678 aaattatgctcaattggtgaactttgctaagttattgttgaattgagatatgattcatgttcaattgatgttgttgttgatgaatcatggcttaggtatg 40885777  T
Q  137 catattcatggattgatgatg 157  Q
    ||||||| || |||| |||||    
T  40885778 catattcttgaattggtgatg 40885798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 10644396 - 10644283
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattt-tgctaagttgttggt-aattgaggtttgattcttgttc 98  Q
    ||||||||||||| |||||||||||| |||||| | |  |||||||| ||||||||||||| | ||||||||||| | | ||||| | |||||| |||||    
T  10644396 attacatgttcaaatatgtaaaaatgttaagttatgagtattgtgctaaattggtgaatttctcctaagttgttgttgatttgagatgtgattcatgttc 10644297  T
Q  99 aattgatgttatga 112  Q
    ||||||||||||||    
T  10644296 aattgatgttatga 10644283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 157
Target Start/End: Complemental strand, 47357710 - 47357654
Alignment:
Q  101 ttgatgttatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  47357710 ttgatattatgattgatgaataattgattgggtatgtatattcatggattgatgatg 47357654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 13048308 - 13048421
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattt-tgctaagttgttggta-attgaggtttgattcttgttc 98  Q
    |||||||||| || |||||||||| |||||||| | || |||||||||||||| ||||||| | ||||||||||| ||  ||||| | |||| |||||||    
T  13048308 attacatgtttaaatatgtaaaaaggataagttatgaatattgtgctcaattgatgaatttctcctaagttgttgttagtttgagatgtgatgcttgttc 13048407  T
Q  99 aattgatgttatga 112  Q
    || |||||||||||    
T  13048408 aaatgatgttatga 13048421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 157
Target Start/End: Complemental strand, 111453 - 111395
Alignment:
Q  99 aattgatgttatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    |||||||||| || ||||||||| |||||||||||||||||||||||| ||||| ||||    
T  111453 aattgatgttgtggttgatgaatcattgcttgggtatgcatattcatgaattgaggatg 111395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 157
Target Start/End: Complemental strand, 26680245 - 26680201
Alignment:
Q  113 ttgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||    
T  26680245 ttgatgaatcattgcttgggtatacatattcatggattgatgatg 26680201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 157
Target Start/End: Original strand, 54118463 - 54118507
Alignment:
Q  113 ttgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||    
T  54118463 ttgatgaatcattgcttgggtatgcatattcatgaattgatgatg 54118507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 149
Target Start/End: Original strand, 13048436 - 13048477
Alignment:
Q  108 tatgattgatgaataattgcttgggtatgcatattcatggat 149  Q
    ||||||| |||||||||||||||||| |||||||||||||||    
T  13048436 tatgattaatgaataattgcttgggtttgcatattcatggat 13048477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 157
Target Start/End: Complemental strand, 13246474 - 13246430
Alignment:
Q  113 ttgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||||||| |||||||||||||||||||||||| ||||| ||||    
T  13246474 ttgatgaatcattgcttgggtatgcatattcatgaattgaggatg 13246430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 157
Target Start/End: Original strand, 15675308 - 15675352
Alignment:
Q  113 ttgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||||||| ||||||||||||| |||||||||| ||||||||||    
T  15675308 ttgatgaatcattgcttgggtatacatattcatgaattgatgatg 15675352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 157
Target Start/End: Complemental strand, 31115673 - 31115629
Alignment:
Q  113 ttgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||||||| ||||||||||||| |||||||||| ||||||||||    
T  31115673 ttgatgaatcattgcttgggtatacatattcatgaattgatgatg 31115629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 98; Significance: 2e-48; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 45051599 - 45051446
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggtaa-ttgaggtttgattcttgttca 99  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | | ||| ||||| ||||||||||| |||    
T  45051599 attacatgttcaaatatgtaaaaatgataagttgtgaaaattgtgctcaattggtgaattttgctaagttatggttaatttgagatttgattcttgctca 45051500  T
Q  100 attgatgttatgattgatgaataattgcttgggtatgcatattcatggattgat 153  Q
    |||||||||||  ||||||||| | |||||||||||||||||||||| ||||||    
T  45051499 attgatgttattgttgatgaatcactgcttgggtatgcatattcatgaattgat 45051446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 41394397 - 41394288
Alignment:
Q  2 ttacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggta-attgaggtttgattcttgttcaa 100  Q
    |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||  ||||| ||||||||||| ||||    
T  41394397 ttacatgttcaaatatgtaaaaatgataagttgtgaaaattgtgctcaattggtgaattttgctaagttattgttatgttgagatttgattcttgctcaa 41394298  T
Q  101 ttgatgttat 110  Q
    ||||||||||    
T  41394297 ttgatgttat 41394288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 22227985 - 22227873
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggtaa-ttgaggtttgattcttgttca 99  Q
    ||||||||||||| ||||||||||||||||||| | |||||||||  |||||| |||||||||||||||||||| ||| ||||| |||||||||||||||    
T  22227985 attacatgttcaaatatgtaaaaatgataagttatgaaaattgtgtccaattgttgaattttgctaagttgttgttaatttgagatttgattcttgttca 22227886  T
Q  100 attgatgttatga 112  Q
    |||||||||||||    
T  22227885 attgatgttatga 22227873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 22232682 - 22232570
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggtaa-ttgaggtttgattcttgttca 99  Q
    ||||||||||||| ||||||||||||||||||| | |||||||||  |||||| |||||||||||||||||||| ||| ||||| |||||||||||||||    
T  22232682 attacatgttcaaatatgtaaaaatgataagttatgaaaattgtgtccaattgttgaattttgctaagttgttgttaatttgagatttgattcttgttca 22232583  T
Q  100 attgatgttatga 112  Q
    |||||||||||||    
T  22232582 attgatgttatga 22232570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 20931521 - 20931410
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggtaa-ttgaggtttgattcttgttca 99  Q
    ||||||||||||  ||||||||||||||||||| | ||||||||||| ||||||||||||||||||| |||||| ||| ||||| |||||||||||||||    
T  20931521 attacatgttcatatatgtaaaaatgataagttatgaaaattgtgctaaattggtgaattttgctaaattgttgttaatttgagatttgattcttgttca 20931422  T
Q  100 attgatgttatg 111  Q
    ||||||||||||    
T  20931421 attgatgttatg 20931410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 20893713 - 20893825
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggta-attgaggtttgattcttgttca 99  Q
    ||||||||||||| || | | |||||||||||||| |||||||||||||||||||||||||||||||||||||| || |||||  | |||||||||||||    
T  20893713 attacatgttcaaataggaacaaatgataagttgtgaaaattgtgctcaattggtgaattttgctaagttgttgttagattgatttatgattcttgttca 20893812  T
Q  100 attgatgttatga 112  Q
    |||||||||||||    
T  20893813 attgatgttatga 20893825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 2116431 - 2116319
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggtaa-ttga-ggtttgattcttgttc 98  Q
    ||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||| ||| ||||   ||||||||||| ||    
T  2116431 attacatgttcaaatatgtaaaaatgataagttgtgaaaatggtgctcaattggtgaattttgctaagttattgttaatttgatattttgattcttgctc 2116332  T
Q  99 aattgatgttatg 111  Q
    |||||||||||||    
T  2116331 aattgatgttatg 2116319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 20913206 - 20913102
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggtaattgaggtttgattcttgttcaa 100  Q
    ||||||||||||  ||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||| |||      ||||||||||||||||    
T  20913206 attacatgttcatatatgtaaaaatgataagttatgaaaattgtgctcaattggtgaattttgcaaagttgttgttaa------tttgattcttgttcaa 20913113  T
Q  101 ttgatgttatg 111  Q
    |||||||||||    
T  20913112 ttgatgttatg 20913102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 20445855 - 20445744
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggt-aattgaggtttgattcttgttca 99  Q
    ||||||||||||| || | | ||||||||||| || |||||||||||||||||||||||||||||||||||||| | ||||| | | ||||||||| |||    
T  20445855 attacatgttcaagtaggaacaaatgataagtggtgaaaattgtgctcaattggtgaattttgctaagttgttgttgaattgtgttatgattcttgatca 20445756  T
Q  100 attgatgttatg 111  Q
    ||||||||||||    
T  20445755 attgatgttatg 20445744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 20531620 - 20531509
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggt-aattgaggtttgattcttgttca 99  Q
    ||||||||||||| || | | ||||||||||| || |||||||||||||||||||||||||||||||||||||| | ||||| | | ||||||||| |||    
T  20531620 attacatgttcaagtaggaacaaatgataagtggtgaaaattgtgctcaattggtgaattttgctaagttgttgttgaattgtgttatgattcttgatca 20531521  T
Q  100 attgatgttatg 111  Q
    ||||||||||||    
T  20531520 attgatgttatg 20531509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 99 - 157
Target Start/End: Complemental strand, 22227867 - 22227809
Alignment:
Q  99 aattgatgttatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  22227867 aattgatgttatgattgatgaataattgcttgggtttgcatattcatggattgatgatg 22227809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 99 - 157
Target Start/End: Complemental strand, 22232564 - 22232506
Alignment:
Q  99 aattgatgttatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  22232564 aattgatgttatgattgatgaataattgcttgggtttgcatattcatggattgatgatg 22232506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 5072463 - 5072576
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattt-tgctaagttgttggtaa-ttgaggtttgattcttgttc 98  Q
    ||||||||||||  |||| |||||||||||||| | || |||||||||||||||||||||| | ||||||||||| ||| ||||| | |||| |||||||    
T  5072463 attacatgttcatatatgcaaaaatgataagttatgaatattgtgctcaattggtgaatttctcctaagttgttgttaagttgagatgtgatgcttgttc 5072562  T
Q  99 aattgatgttatga 112  Q
    || |||||||||||    
T  5072563 aaatgatgttatga 5072576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 18601193 - 18601306
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattt-tgctaagttgttggtaa-ttgaggtttgattcttgttc 98  Q
    ||||||||||||  |||| |||||||||||||| | || |||||||||||||||||||||| | ||||||||||| ||| ||||| | |||| |||||||    
T  18601193 attacatgttcatatatgcaaaaatgataagttatgaatattgtgctcaattggtgaatttctcctaagttgttgttaagttgagatgtgatgcttgttc 18601292  T
Q  99 aattgatgttatga 112  Q
    || |||||||||||    
T  18601293 aaatgatgttatga 18601306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 37844537 - 37844649
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagtt-gtaaaaattgtgctcaattggtgaattttgctaagttgttggta-attgaggtttgattcttgttc 98  Q
    ||||||||||||| || | | |||||||||  | || ||||||||||||||||  |||||||||||||||||||| || |||||| | ||||||||||||    
T  37844537 attacatgttcaagtaggaacaaatgataaaatagtgaaaattgtgctcaattaatgaattttgctaagttgttgttagattgagttatgattcttgttc 37844636  T
Q  99 aattgatgttatg 111  Q
    |||||||||||||    
T  37844637 aattgatgttatg 37844649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 113 - 157
Target Start/End: Complemental strand, 20913081 - 20913037
Alignment:
Q  113 ttgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    |||||||||||||||||||||||||||||||||| ||||||||||    
T  20913081 ttgatgaataattgcttgggtatgcatattcatgaattgatgatg 20913037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 116 - 157
Target Start/End: Original strand, 5072599 - 5072640
Alignment:
Q  116 atgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  5072599 atgaataattgcttgggtttgcatattcatggattgatgatg 5072640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 116 - 157
Target Start/End: Original strand, 18601329 - 18601370
Alignment:
Q  116 atgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  18601329 atgaataattgcttgggtttgcatattcatggattgatgatg 18601370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 157
Target Start/End: Original strand, 37844656 - 37844714
Alignment:
Q  99 aattgatgttatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    |||||||||| || ||||||| | |||||||||||||||||||||||| ||||| ||||    
T  37844656 aattgatgttgtggttgatgagtcattgcttgggtatgcatattcatgaattgaggatg 37844714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 153
Target Start/End: Complemental strand, 2116298 - 2116258
Alignment:
Q  113 ttgatgaataattgcttgggtatgcatattcatggattgat 153  Q
    ||||||||| |||||||||||||||||||||||| ||||||    
T  2116298 ttgatgaatcattgcttgggtatgcatattcatgaattgat 2116258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 157
Target Start/End: Complemental strand, 20445723 - 20445679
Alignment:
Q  113 ttgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||||||| |||||||||||||||||||||||| ||||| ||||    
T  20445723 ttgatgaatcattgcttgggtatgcatattcatgaattgaggatg 20445679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 157
Target Start/End: Complemental strand, 20531488 - 20531444
Alignment:
Q  113 ttgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||||||| |||||||||||||||||||||||| ||||| ||||    
T  20531488 ttgatgaatcattgcttgggtatgcatattcatgaattgaggatg 20531444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 157
Target Start/End: Complemental strand, 20931389 - 20931345
Alignment:
Q  113 ttgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||||||||||| |||||||||||||||||||| ||| ||||||    
T  20931389 ttgatgaataatttcttgggtatgcatattcatgaattaatgatg 20931345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 157
Target Start/End: Complemental strand, 41394266 - 41394222
Alignment:
Q  113 ttgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||||||| | || ||||||||||||||||||||||||||||||    
T  41394266 ttgatgaatcactgattgggtatgcatattcatggattgatgatg 41394222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 157
Target Start/End: Original strand, 20893845 - 20893889
Alignment:
Q  113 ttgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||||||| |||| ||||||||||||||||||  ||||||||||    
T  20893845 ttgatgaatcattgtttgggtatgcatattcataaattgatgatg 20893889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 6151 - 6326
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggtaattgaggtttgattcttgttcaa 100  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  6151 attacatgttcaaatatgtaaaaataataagttgtaaaaattgtgctgaattggtgaattttgctaagttgttgttaattgagatttgattcttgttcaa 6250  T
Q  101 ttga-------------------tgttatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
     |||                   |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6251 gtgatgttatggatgttaatttttgttatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 6326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 88; Significance: 2e-42; HSPs: 4)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 1300 - 1189
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggtaa-ttgaggtttgattcttgttca 99  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||    
T  1300 attacatgttcaaatatgtaaaaatgataagttgtgaaaattgtgctcaattggtgaattttgctaagttgttgttaatttgagatttgattcttgttca 1201  T
Q  100 attgatgttatg 111  Q
    ||||||||||||    
T  1200 attgatgttatg 1189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 3669 - 3780
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggtaa-ttgaggtttgattcttgttca 99  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||| ||||| |||||||||||||||    
T  3669 attacatgttcaaatatgtaaaaatgataagttgtgaaaattgtgctcaattggtaaattttgctaagttgttgttaatttgagatttgattcttgttca 3768  T
Q  100 attgatgttatg 111  Q
    ||||||||||||    
T  3769 attgatgttatg 3780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 155
Target Start/End: Original strand, 3798 - 3843
Alignment:
Q  110 tgattgatgaataattgcttgggtatgcatattcatggattgatga 155  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||    
T  3798 tgattgaggaataattgcttgggtatgcatattgatggattgatga 3843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 157
Target Start/End: Complemental strand, 1168 - 1124
Alignment:
Q  113 ttgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||    
T  1168 ttgatgaataattgcttgggtgtgcatattcatgaattgatgatg 1124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 88; Significance: 2e-42; HSPs: 4)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 148897 - 148786
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggtaa-ttgaggtttgattcttgttca 99  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||    
T  148897 attacatgttcaaatatgtaaaaatgataagttgtgaaaattgtgctcaattggtgaattttgctaagttgttgttaatttgagatttgattcttgttca 148798  T
Q  100 attgatgttatg 111  Q
    ||||||||||||    
T  148797 attgatgttatg 148786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 9025 - 8915
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggt-aattgaggtttgattcttgttca 99  Q
    ||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||||| | ||||||| | |||||  ||||||    
T  9025 attacatgttcaattatgtaaaaatgtgaagttgtgaaaattgtgctcaattggtgaattttgctaagttgttgttgaattgagatatgattaatgttca 8926  T
Q  100 attgatgttat 110  Q
    |||||||||||    
T  8925 attgatgttat 8915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 157
Target Start/End: Complemental strand, 8893 - 8849
Alignment:
Q  113 ttgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||||||| ||||||||||||| |||||||||| ||||||||||    
T  8893 ttgatgaatcattgcttgggtatacatattcatgaattgatgatg 8849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 157
Target Start/End: Complemental strand, 148765 - 148721
Alignment:
Q  113 ttgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||||||| |||||||||||||| ||||||||| ||||||||||    
T  148765 ttgatgaatcattgcttgggtatgtatattcatgaattgatgatg 148721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 88; Significance: 2e-42; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 23507141 - 23507030
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggtaa-ttgaggtttgattcttgttca 99  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||    
T  23507141 attacatgttcaaatatgtaaaaatgataagttgtgaaaattgtgctcaattggtgaattttgctaagttgttgttaatttgagatttgattcttgttca 23507042  T
Q  100 attgatgttatg 111  Q
    ||||||||||||    
T  23507041 attgatgttatg 23507030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 29188359 - 29188470
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggtaa-ttgaggtttgattcttgttca 99  Q
    ||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||| ||| ||||| ||||||||||| |||    
T  29188359 attacatgttcaaatatgtaaaaatgataagttgtgaaaatggtgctcaattggtgaattttgctaagttattgttaatttgagatttgattcttgctca 29188458  T
Q  100 attgatgttatg 111  Q
    ||||||||||||    
T  29188459 attgatgttatg 29188470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 22053920 - 22054030
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggt-aattgaggtttgattcttgttca 99  Q
    ||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||||| | ||||||| | |||||| ||||||    
T  22053920 attacatgttcaattatgtaaaaatgtgaagttgtgaaaattgtgctcaattggtgaattttgctaagttgttgttgaattgagatatgattcatgttca 22054019  T
Q  100 attgatgttat 110  Q
    |||||||||||    
T  22054020 attgatgttat 22054030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 27182634 - 27182745
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggta-attgaggtttgattcttgttca 99  Q
    ||||||||||||| || | | |||||||||||||| |||||||||||||||||||||||||||||||||||||| || |||||| | |||||||||||||    
T  27182634 attacatgttcaaataggaacaaatgataagttgtgaaaattgtgctcaattggtgaattttgctaagttgttgttagattgagttatgattcttgttca 27182733  T
Q  100 attgatgttatg 111  Q
    ||||||||||||    
T  27182734 attgatgttatg 27182745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 18531154 - 18531264
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggt-aattgaggtttgattcttgttca 99  Q
    ||||||||||||||||||||||||||  ||||||| ||||||||| |||||||||||||||||||||||||||| | ||||||| | |||||| ||||||    
T  18531154 attacatgttcaattatgtaaaaatgtgaagttgtgaaaattgtgttcaattggtgaattttgctaagttgttgttgaattgagatatgattcatgttca 18531253  T
Q  100 attgatgttat 110  Q
    |||||||||||    
T  18531254 attgatgttat 18531264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 110
Target Start/End: Complemental strand, 34939450 - 34939344
Alignment:
Q  4 acatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggtaattgaggtttgattcttgttcaattg 103  Q
    |||||||||||||||||||||||  ||||| | ||||||||||||||||| || ||||||||||||  |||  ||||||| | ||||||||||||| |||    
T  34939450 acatgttcaattatgtaaaaatgtgaagttatgaaaattgtgctcaattgatggattttgctaagtcattgtgaattgagttatgattcttgttcagttg 34939351  T
Q  104 atgttat 110  Q
    |||||||    
T  34939350 atgttat 34939344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 101 - 157
Target Start/End: Complemental strand, 12430 - 12374
Alignment:
Q  101 ttgatgttatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12430 ttgatattatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 12374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 101 - 157
Target Start/End: Original strand, 18778188 - 18778244
Alignment:
Q  101 ttgatgttatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18778188 ttgatattatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 18778244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 101 - 157
Target Start/End: Original strand, 21073791 - 21073847
Alignment:
Q  101 ttgatgttatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21073791 ttgatattatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 21073847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 101 - 157
Target Start/End: Original strand, 22366677 - 22366733
Alignment:
Q  101 ttgatgttatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22366677 ttgatattatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 22366733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 101 - 157
Target Start/End: Complemental strand, 25426684 - 25426628
Alignment:
Q  101 ttgatgttatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25426684 ttgatattatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 25426628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 27010018 - 27009905
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattt-tgctaagttgttggtaa-ttgaggtttgattcttgttc 98  Q
    |||||||||| || ||||||||||||||||||| | || ||||| |||||||||||||||| | ||||||||||| ||| ||||| | |||| |||||||    
T  27010018 attacatgtttaaatatgtaaaaatgataagttatgaatattgtactcaattggtgaatttctcctaagttgttgttaatttgagatgtgatgcttgttc 27009919  T
Q  99 aattgatgttatga 112  Q
    || |||||||||||    
T  27009918 aaatgatgttatga 27009905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 157
Target Start/End: Original strand, 43443591 - 43443647
Alignment:
Q  101 ttgatgttatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  43443591 ttgatattatgattgatgaataattgcttgggtttgcatattcatggattgatgatg 43443647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 19500076 - 19499963
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattt-tgctaagttgttggtaa-ttgaggtttgattcttgttc 98  Q
    ||||||||||||  |||| |||||||||||||| | || |||||||| || |||||||||| | ||||||||||| ||| ||||| | ||||||||||||    
T  19500076 attacatgttcatatatgcaaaaatgataagttatgaagattgtgctaaagtggtgaatttctcctaagttgttgttaatttgagttgtgattcttgttc 19499977  T
Q  99 aattgatgttatga 112  Q
    || |||||||||||    
T  19499976 aaatgatgttatga 19499963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 43443470 - 43443583
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattt-tgctaagttgttggt-aattgaggtttgattcttgttc 98  Q
    ||||||||||||  |||| |||||||||||||| | || |||||||||||||||||||||| | ||||||||||| | | ||||| | ||| ||||||||    
T  43443470 attacatgttcatatatgcaaaaatgataagttatgaatattgtgctcaattggtgaatttcttctaagttgttgttgatttgagatgtgagtcttgttc 43443569  T
Q  99 aattgatgttatga 112  Q
    || |||||||||||    
T  43443570 aaatgatgttatga 43443583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 157
Target Start/End: Complemental strand, 19499955 - 19499899
Alignment:
Q  101 ttgatgttatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  19499955 ttgatattatgattgattaataattgctttggtatgcatattcatggattgatgatg 19499899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 18778067 - 18778168
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattt-tgctaagttgttggtaa-ttgaggtttgattcttgttc 98  Q
    ||||||||||||  |||| |||||||||||||| | || |||||||| ||||||||||||| | ||||||||||| ||| ||||| | ||||||||||||    
T  18778067 attacatgttcatatatgcaaaaatgataagttatgaagattgtgctaaattggtgaatttctcctaagttgttgttaatttgagttgtgattcttgttc 18778166  T
Q  99 aa 100  Q
    ||    
T  18778167 aa 18778168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 157
Target Start/End: Original strand, 4200181 - 4200237
Alignment:
Q  101 ttgatgttatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||| |||||||||    
T  4200181 ttgatattatgattgatgaatgattgcttgggtttgcatattcatgggttgatgatg 4200237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 113 - 157
Target Start/End: Complemental strand, 23507009 - 23506965
Alignment:
Q  113 ttgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    |||||||||||||||||||||||||||||||||| ||||||||||    
T  23507009 ttgatgaataattgcttgggtatgcatattcatgaattgatgatg 23506965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 157
Target Start/End: Complemental strand, 27009897 - 27009841
Alignment:
Q  101 ttgatgttatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||| |||||||| |||||||||||||||||| ||||||||||||||||| |||||    
T  27009897 ttgatattatgattaatgaataattgcttgggtttgcatattcatggattgttgatg 27009841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 21073670 - 21073771
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattt-tgctaagttgttggtaa-ttgaggtttgattcttgttc 98  Q
    ||||||||||||  |||| |||||||||||||| | || |||||||| || |||||||||| | ||||||||||| ||| ||||| | ||||||||||||    
T  21073670 attacatgttcatatatgcaaaaatgataagttatgaagattgtgctaaagtggtgaatttcttctaagttgttgttaatttgagttgtgattcttgttc 21073769  T
Q  99 aa 100  Q
    ||    
T  21073770 aa 21073771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 22366556 - 22366657
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattt-tgctaagttgttggtaa-ttgaggtttgattcttgttc 98  Q
    ||||||||||||  |||| |||||||||||||| | || |||||||| ||||||||||||| | ||||||||||| ||| ||||| | |||| |||||||    
T  22366556 attacatgttcatatatgcaaaaatgataagttatgaagattgtgctaaattggtgaatttctcctaagttgttgttaatttgagttgtgatgcttgttc 22366655  T
Q  99 aa 100  Q
    ||    
T  22366656 aa 22366657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 25426805 - 25426704
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattt-tgctaagttgttggtaa-ttgaggtttgattcttgttc 98  Q
    ||||||||||||  |||| |||||||||||||| | || |||||||| || |||||||||| | ||||||||||| ||| ||||| | ||||||||||||    
T  25426805 attacatgttcatatatgcaaaaatgataagttatgaagattgtgctaaagtggtgaatttctcctaagttgttgttaatttgagttgtgattcttgttc 25426706  T
Q  99 aa 100  Q
    ||    
T  25426705 aa 25426704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 12551 - 12450
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattt-tgctaagttgttggtaa-ttgaggtttgattcttgttc 98  Q
    ||||||||||||  |||| |||| ||||||||| | || |||||||| || |||||||||| | ||||||||||| ||| ||||| | ||||||||||||    
T  12551 attacatgttcatatatgcaaaagtgataagttatgaagattgtgctaaagtggtgaatttctcctaagttgttgttaatttgagttgtgattcttgttc 12452  T
Q  99 aa 100  Q
    ||    
T  12451 aa 12450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 4200060 - 4200173
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattt-tgctaagttgttggt-aattgaggtttgattcttgttc 98  Q
    ||||||||||||  |||| |||||||||||||| | || ||| |||| ||||||||||||| |  || ||||||| | | ||||| | |||||| |||||    
T  4200060 attacatgttcatatatgcaaaaatgataagttatgaatattatgctaaattggtgaatttctcttatgttgttgttgatttgagatgtgattcatgttc 4200159  T
Q  99 aattgatgttatga 112  Q
    ||||||||||||||    
T  4200160 aattgatgttatga 4200173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 157
Target Start/End: Original strand, 27182766 - 27182810
Alignment:
Q  113 ttgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||||||| |||||||| ||||||||||||||| ||||||||||    
T  27182766 ttgatgaatcattgcttgagtatgcatattcatgaattgatgatg 27182810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 153
Target Start/End: Original strand, 29190482 - 29190522
Alignment:
Q  113 ttgatgaataattgcttgggtatgcatattcatggattgat 153  Q
    ||||||||| |||||||||||||||||||||||| ||||||    
T  29190482 ttgatgaatcattgcttgggtatgcatattcatgaattgat 29190522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 157
Target Start/End: Original strand, 17471803 - 17471844
Alignment:
Q  116 atgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    |||||| |||||||||||| ||||||||||| ||||||||||    
T  17471803 atgaatcattgcttgggtacgcatattcatgaattgatgatg 17471844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 157
Target Start/End: Original strand, 22054052 - 22054096
Alignment:
Q  113 ttgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||||||| ||||||||||| | |||||||||| ||||||||||    
T  22054052 ttgatgaatcattgcttgggtctacatattcatgaattgatgatg 22054096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 84; Significance: 5e-40; HSPs: 2)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 9054 - 8943
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggtaa-ttgaggtttgattcttgttca 99  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||||||||| ||| ||||| |||||||||||||||    
T  9054 attacatgttcaattatgtaaaaatgttaagttgtgaaaattgtgctcaattggtgaattttgttaagttgttgttaatttgagatttgattcttgttca 8955  T
Q  100 attgatgttatg 111  Q
    ||||||||||||    
T  8954 attgatgttatg 8943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 110 - 157
Target Start/End: Complemental strand, 8925 - 8878
Alignment:
Q  110 tgattgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  8925 tgattgatgaataattgcttgggtatgcatattcatgtattgatgatg 8878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 84; Significance: 5e-40; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 43373555 - 43373666
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggtaa-ttgaggtttgattcttgttca 99  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||    
T  43373555 attacatgttcaaatatgtaaaaatgataagttgtgaaaattgtgctcaattggtgaattttgctaagttgttgttaatttgagatttgattcttgttca 43373654  T
Q  100 attgatgttatg 111  Q
    ||||||| ||||    
T  43373655 attgatgctatg 43373666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 16193803 - 16193914
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggtaa-ttgaggtttgattcttgttca 99  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| || |||||| ||| ||||| |||||||||||||||    
T  16193803 attacatgttcaaatatgtaaaaatgataagttgtgaaaattgtgctcaattggtgaattttgccaaattgttgttaatttgagatttgattcttgttca 16193902  T
Q  100 attgatgttatg 111  Q
    ||||||||||||    
T  16193903 attgatgttatg 16193914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 6774333 - 6774443
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggtaa-ttgaggtttgattcttgttca 99  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||| ||||| ||||||||||| |||    
T  6774333 attacatgttcaaatatgtaaaaatgataagttgtgaaaattgtgctcaattggtgaattttgctaagttattgttaatttgagatttgattcttgctca 6774432  T
Q  100 attgatgttat 110  Q
    |||||||||||    
T  6774433 attgatgttat 6774443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 24549158 - 24549047
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggtaa-ttgaggtttgattcttgttca 99  Q
    ||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||| ||| ||| | ||||||||||| |||    
T  24549158 attacatgttcaaatatgtaaaaatgataagttgtgaaaatggtgctcaattggtgaattttgctaagttattgttaatttgggatttgattcttgctca 24549059  T
Q  100 attgatgttatg 111  Q
    ||||||||||||    
T  24549058 attgatgttatg 24549047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 16405062 - 16405169
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggtaattgaggtttgattcttgttcaa 100  Q
    ||||||||||||| || | | ||||| |||||||| |||||||||||||||||||||||||||||||||||||   ||||||  | ||||||||||||||    
T  16405062 attacatgttcaaataggaacaaatgttaagttgtgaaaattgtgctcaattggtgaattttgctaagttgtt--aaattgacatatgattcttgttcaa 16405159  T
Q  101 ttgatgttat 110  Q
    ||||||||||    
T  16405160 ttgatgttat 16405169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 110
Target Start/End: Complemental strand, 17345742 - 17345636
Alignment:
Q  4 acatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggtaattgaggtttgattcttgttcaattg 103  Q
    |||||||||||||||||||||||  ||||| | ||||||||||||||||| || ||||||||||||| |||  ||||||| | ||||||||||||| |||    
T  17345742 acatgttcaattatgtaaaaatgtgaagttatgaaaattgtgctcaattgatggattttgctaagttattgtgaattgagttatgattcttgttcagttg 17345643  T
Q  104 atgttat 110  Q
    || ||||    
T  17345642 atattat 17345636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 21844647 - 21844760
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattt-tgctaagttgttggtaa-ttgaggtttgattcttgttc 98  Q
    |||||||||| || ||||||||||||||||||| | || |||||||||||||||||||||| | ||||||||||| ||| ||||| | ||||| ||||||    
T  21844647 attacatgtttaaatatgtaaaaatgataagttatgaatattgtgctcaattggtgaatttctcctaagttgttgttaatttgagatgtgatttttgttc 21844746  T
Q  99 aattgatgttatga 112  Q
    || |||||||||||    
T  21844747 aaatgatgttatga 21844760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 21852040 - 21852153
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattt-tgctaagttgttggtaa-ttgaggtttgattcttgttc 98  Q
    |||| ||||| || ||||||||||||||||||| | || |||||||||||||||||||||| | ||||||||||| ||| ||||| | ||||||||||||    
T  21852040 attaaatgtttaaatatgtaaaaatgataagttatgaatattgtgctcaattggtgaatttctcctaagttgttgttaatttgagatgtgattcttgttc 21852139  T
Q  99 aattgatgttatga 112  Q
    || |||||||||||    
T  21852140 aaatgatgttatga 21852153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 30120899 - 30120786
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattt-tgctaagttgttggtaa-ttgaggtttgattcttgttc 98  Q
    ||||||||||||  |||| |||||||||||||| | || |||||||||||||||||||||| | ||||||||||| ||| ||||| | |||||| |||||    
T  30120899 attacatgttcatatatgcaaaaatgataagttatgaatattgtgctcaattggtgaatttctcctaagttgttgttaatttgagatgtgattcatgttc 30120800  T
Q  99 aattgatgttatga 112  Q
    ||||||||||||||    
T  30120799 aattgatgttatga 30120786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 101 - 157
Target Start/End: Original strand, 222887 - 222943
Alignment:
Q  101 ttgatgttatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  222887 ttgatattatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 222943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 101 - 157
Target Start/End: Original strand, 736510 - 736566
Alignment:
Q  101 ttgatgttatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  736510 ttgatattatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 736566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 101 - 157
Target Start/End: Original strand, 860405 - 860461
Alignment:
Q  101 ttgatgttatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  860405 ttgatattatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 860461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 24928878 - 24928949
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgt 72  Q
    ||||||||||||| || | | |||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  24928878 attacatgttcaaataggaacaaatgataagttgtgaaaattgtgctcaattggtgaatttcgctaagttgt 24928949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 16674467 - 16674580
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattt-tgctaagttgttggtaa-ttgaggtttgattcttgttc 98  Q
    ||||||||||||  |||| |||||||||||||| | || |||||||| ||||||||||||| | ||||||||||| ||| ||||| | |||| |||||||    
T  16674467 attacatgttcatatatgcaaaaatgataagttatgaatattgtgcttaattggtgaatttctcctaagttgttgttaagttgagatgtgatgcttgttc 16674566  T
Q  99 aattgatgttatga 112  Q
    || |||||||||||    
T  16674567 aaatgatgttatga 16674580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 107 - 157
Target Start/End: Complemental strand, 30120772 - 30120722
Alignment:
Q  107 ttatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  30120772 ttatgattgatgaataattgcttgggtttgcatattcatcgattgatgatg 30120722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 222766 - 222867
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattt-tgctaagttgttggtaa-ttgaggtttgattcttgttc 98  Q
    ||||||||||||  |||| |||||||||||||| | || |||||||| ||||||||||||| | ||||||||||| ||| ||||| | ||||||||||||    
T  222766 attacatgttcatatatgcaaaaatgataagttatgaagattgtgctaaattggtgaatttctcctaagttgttgttaatttgagttgtgattcttgttc 222865  T
Q  99 aa 100  Q
    ||    
T  222866 aa 222867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 736389 - 736490
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattt-tgctaagttgttggtaa-ttgaggtttgattcttgttc 98  Q
    ||||||||||||  |||| |||||||||||||| | || |||||||| ||||||||||||| | ||||||||||| ||| ||||| | ||||||||||||    
T  736389 attacatgttcatatatgcaaaaatgataagttatgaagattgtgctaaattggtgaatttctcctaagttgttgttaatttgagttgtgattcttgttc 736488  T
Q  99 aa 100  Q
    ||    
T  736489 aa 736490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 860284 - 860385
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattt-tgctaagttgttggtaa-ttgaggtttgattcttgttc 98  Q
    ||||||||||||  |||| |||||||||||||| | || |||||||| ||||||||||||| | ||||||||||| ||| ||||| | ||||||||||||    
T  860284 attacatgttcatatatgcaaaaatgataagttatgaagattgtgctaaattggtgaatttctcctaagttgttgttaatttgagttgtgattcttgttc 860383  T
Q  99 aa 100  Q
    ||    
T  860384 aa 860385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 113 - 157
Target Start/End: Original strand, 43373687 - 43373731
Alignment:
Q  113 ttgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    |||||||||||||||||||||||||||||||||| ||||||||||    
T  43373687 ttgatgaataattgcttgggtatgcatattcatgaattgatgatg 43373731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 99 - 146
Target Start/End: Original strand, 24928996 - 24929043
Alignment:
Q  99 aattgatgttatgattgatgaataattgcttgggtatgcatattcatg 146  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||    
T  24928996 aattgatgttgtgattgatgaatcattgcttgggtatgcatattcatg 24929043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 157
Target Start/End: Original strand, 21844774 - 21844824
Alignment:
Q  107 ttatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||| |||||    
T  21844774 ttatgattgatgaataattgcttgggtttgcatattcattgattgttgatg 21844824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 157
Target Start/End: Original strand, 21852167 - 21852217
Alignment:
Q  107 ttatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||| |||||    
T  21852167 ttatgattgatgaataattgcttgggtttgcatattcattgattgttgatg 21852217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 157
Target Start/End: Original strand, 16674595 - 16674644
Alignment:
Q  108 tatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||||| ||||||||||||||| || |||||||||||||||||||||||    
T  16674595 tatgattaatgaataattgcttgagtttgcatattcatggattgatgatg 16674644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 157
Target Start/End: Original strand, 22907432 - 22907476
Alignment:
Q  113 ttgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||    
T  22907432 ttgatgaatcattgcttgggtatacatattcatggattgatgatg 22907476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 16193935 - 16193980
Alignment:
Q  113 ttgatgaataattgcttgggtatgcatattcatggattgatgatgt 158  Q
    ||||||||| |||||||||||||||||||||||| ||||| |||||    
T  16193935 ttgatgaatcattgcttgggtatgcatattcatgaattgaggatgt 16193980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 153
Target Start/End: Complemental strand, 24549026 - 24548986
Alignment:
Q  113 ttgatgaataattgcttgggtatgcatattcatggattgat 153  Q
    ||||||||| |||||||||||||||||||||||| ||||||    
T  24549026 ttgatgaatcattgcttgggtatgcatattcatgaattgat 24548986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 153
Target Start/End: Original strand, 6774465 - 6774505
Alignment:
Q  113 ttgatgaataattgcttgggtatgcatattcatggattgat 153  Q
    ||||||||| | |||||||||||||||||||||| ||||||    
T  6774465 ttgatgaatcactgcttgggtatgcatattcatgaattgat 6774505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 157
Target Start/End: Original strand, 16405191 - 16405235
Alignment:
Q  113 ttgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||||||| | |||||||||||||| ||||||| ||||||||||    
T  16405191 ttgatgaatcactgcttgggtatgcaaattcatgaattgatgatg 16405235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 5e-40; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 18253922 - 18254033
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggtaa-ttgaggtttgattcttgttca 99  Q
    ||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||    
T  18253922 attacatgttcaaatgtgtaaaaatgataagttgtgaaaattgtgctcaattggtgaattttgctaagttgttgttaatttgagatttgattcttgttca 18254021  T
Q  100 attgatgttatg 111  Q
    ||||||||||||    
T  18254022 attgatgttatg 18254033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 5 - 111
Target Start/End: Complemental strand, 16211938 - 16211831
Alignment:
Q  5 catgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggtaa-ttgaggtttgattcttgttcaattg 103  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||| |||||    
T  16211938 catgttcaaatatgtaaaaatgataagttgtgaaaattgtgctcaattggtgaattttgctaagttgttgttaatttgagatttgattcttgttaaattg 16211839  T
Q  104 atgttatg 111  Q
    ||||||||    
T  16211838 atgttatg 16211831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 47481118 - 47481228
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggt-aattgaggtttgattcttgttca 99  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| | ||||||| | |||||||||||||    
T  47481118 attacatgttcaaatatgtaaaaatgataagttgtgaaaattgtgttcaattggtgaattttgctaagttgttgttgaattgagttatgattcttgttca 47481217  T
Q  100 attgatgttat 110  Q
    |||||||||||    
T  47481218 attgatgttat 47481228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 36052840 - 36052735
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggtaattgaggtttgattcttgttcaa 100  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||   | ||||| ||||||||||||||||    
T  36052840 attacatgttcaaatatgtaaaaatgataagttgtgaaaattgtgctcaattggtgaattttgctaagttgtt--aatttgagatttgattcttgttcaa 36052743  T
Q  101 ttgatgtt 108  Q
    ||||||||    
T  36052742 ttgatgtt 36052735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 11580826 - 11580937
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggta-attgaggtttgattcttgttca 99  Q
    ||||||||||||| || | | |||||||||||||| |||||||||||||||||||||||||||||||||||||| || |||||| | |||||||||||||    
T  11580826 attacatgttcaaataggaacaaatgataagttgtgaaaattgtgctcaattggtgaattttgctaagttgttgttagattgagttatgattcttgttca 11580925  T
Q  100 attgatgttatg 111  Q
    ||||||||||||    
T  11580926 attgatgttatg 11580937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 16479037 - 16479147
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggtaa-ttgaggtttgattcttgttca 99  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||  ||| ||||| ||||||||||| |||    
T  16479037 attacatgttcaaatatgtaaaaatgataagttgtgaaaattgtgctcaattggtgaattttgttaagttatttttaatttgagatttgattcttgctca 16479136  T
Q  100 attgatgttat 110  Q
    |||||||||||    
T  16479137 attgatgttat 16479147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 3060142 - 3060030
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggta-attgaggtttgattcttgttca 99  Q
    ||||||||||||| |||||||||||||||| |||| |||||| ||||||| |||||||||||| |||||||||| || |||||| | |||||||||||||    
T  3060142 attacatgttcaaatatgtaaaaatgataaattgtgaaaattatgctcaaatggtgaattttgttaagttgttgttagattgagttatgattcttgttca 3060043  T
Q  100 attgatgttatga 112  Q
    |||||||||||||    
T  3060042 attgatgttatga 3060030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 112
Target Start/End: Original strand, 13037105 - 13037213
Alignment:
Q  5 catgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggta-attgaggtttgattcttgttcaattg 103  Q
    ||||||||| || | | |||||||||||||| |||||||||||||||||||||||||||||||||||||| || |||||| | ||||||||||||||||     
T  13037105 catgttcaaataggaacaaatgataagttgtgaaaattgtgctcaattggtgaattttgctaagttgttgttagattgagttatgattcttgttcaatta 13037204  T
Q  104 atgttatga 112  Q
    |||||||||    
T  13037205 atgttatga 13037213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 2437634 - 2437521
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaa-ttttgctaagttgttggtaat-tgaggtttgattcttgttc 98  Q
    ||||||||||||  |||| |||||||||||||| | || |||||| |||||||||||| |||| ||||||||||| |||| |||| ||||||||||||||    
T  2437634 attacatgttcatatatgcaaaaatgataagttatgaagattgtgttcaattggtgaatttttcctaagttgttgttaatatgagatttgattcttgttc 2437535  T
Q  99 aattgatgttatga 112  Q
    || |||||||||||    
T  2437534 aaatgatgttatga 2437521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 13572853 - 13572740
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattt-tgctaagttgttggtaa-ttgaggtttgattcttgttc 98  Q
    |||||||||| || ||||||||||||||||||| | || |||||||||||||||||||||| | ||||||||||| ||| ||||| | |||| |||||||    
T  13572853 attacatgtttaaatatgtaaaaatgataagttatgaatattgtgctcaattggtgaatttctcctaagttgttgttaatttgagatgtgatgcttgttc 13572754  T
Q  99 aattgatgttatga 112  Q
    || |||||||||||    
T  13572753 aaatgatgttatga 13572740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 10989586 - 10989474
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattt-tgctaagttgttggtaattgaggtttgattcttgttca 99  Q
    ||||||||||||  |||| |||||||||||||| | || |||||||||||||||||||||| | |||||||||||  | ||||| | |||||||||||||    
T  10989586 attacatgttcatatatgcaaaaatgataagttatgaatattgtgctcaattggtgaatttctcctaagttgttgtaatttgagttgtgattcttgttca 10989487  T
Q  100 attgatgttatga 112  Q
    | |||||||||||    
T  10989486 aatgatgttatga 10989474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 107 - 157
Target Start/End: Complemental strand, 10989460 - 10989410
Alignment:
Q  107 ttatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  10989460 ttatgattgatgaataattgcttgggtttgcatattcatggattgatgatg 10989410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 157
Target Start/End: Original strand, 13911221 - 13911277
Alignment:
Q  101 ttgatgttatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  13911221 ttgatattatgattgatgaataatttcttgggtttgcatattcatggattgatgatg 13911277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 38 - 110
Target Start/End: Complemental strand, 13321154 - 13321080
Alignment:
Q  38 aaattgtgctcaattggtgaattttgctaagttgttggt--aattgaggtttgattcttgttcaattgatgttat 110  Q
    |||||||||||||||||||||||||||||||||| | ||  ||||||| | |||||| |||||||||||||||||    
T  13321154 aaattgtgctcaattggtgaattttgctaagttgattgttgaattgagatatgattcatgttcaattgatgttat 13321080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 107 - 157
Target Start/End: Complemental strand, 2437507 - 2437457
Alignment:
Q  107 ttatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||    
T  2437507 ttatgattgatgaataattgcttgagtttgcatattcatggattgatgatg 2437457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 25292425 - 25292537
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggtaa-ttgaggtttgattcttgttca 99  Q
    |||||||||| || |||||||||| |||||| | | || ||||||||||||||||||||| | ||| ||||| | ||| ||||| | |||| ||||||||    
T  25292425 attacatgtttaaatatgtaaaaaggataagctatgaatattgtgctcaattggtgaattctcctaggttgtcgttaatttgagatgtgatgcttgttca 25292524  T
Q  100 attgatgttatga 112  Q
    | |||||||||||    
T  25292525 aatgatgttatga 25292537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 113 - 157
Target Start/End: Complemental strand, 36052711 - 36052667
Alignment:
Q  113 ttgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    |||||||||||||||||||||||||||||||||| ||||||||||    
T  36052711 ttgatgaataattgcttgggtatgcatattcatgaattgatgatg 36052667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 157
Target Start/End: Original strand, 18254051 - 18254098
Alignment:
Q  110 tgattgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||    
T  18254051 tgattgatgaataattgcctgagtatgcatattcatggattgatgatg 18254098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 13911099 - 13911213
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattt-tgct-aagttgttggt-aattgaggtttgattcttgtt 97  Q
    ||||||||||||  |||| |||||||||||||| | || ||| |||||||||||||||||| | || ||||||||| | | ||||| | |||||| ||||    
T  13911099 attacatgttcatatatgcaaaaatgataagttatgaatattatgctcaattggtgaatttctcctaaagttgttgttgatttgagatgtgattcatgtt 13911198  T
Q  98 caattgatgttatga 112  Q
    |||||||||||||||    
T  13911199 caattgatgttatga 13911213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 157
Target Start/End: Complemental strand, 7293061 - 7293017
Alignment:
Q  113 ttgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||    
T  7293061 ttgatgaatcattgcttgggtatacatattcatggattgatgatg 7293017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 157
Target Start/End: Original strand, 16479169 - 16479213
Alignment:
Q  113 ttgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||||||| | |||||||||||||||||||||||||||||||||    
T  16479169 ttgatgaatcactgcttgggtatgcatattcatggattgatgatg 16479213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 157
Target Start/End: Original strand, 47481250 - 47481294
Alignment:
Q  113 ttgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||    
T  47481250 ttgatgaatcattgcttgggtatgcatattcatgaattgatgatg 47481294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 108
Target Start/End: Original strand, 296057 - 296162
Alignment:
Q  5 catgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggt--aattgaggtttgattcttgttcaatt 102  Q
    |||||| |||||||||||||||| ||||| |||||||| |   ||| |||||||||||||||| ||| || |  ||||| | | |||||| |||||||||    
T  296057 catgttgaattatgtaaaaatgagaagttataaaaattatatccaaatggtgaattttgctaaattgatgtttgaattgtgttgtgattcatgttcaatt 296156  T
Q  103 gatgtt 108  Q
    ||||||    
T  296157 gatgtt 296162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 101 - 151
Target Start/End: Original strand, 25292545 - 25292595
Alignment:
Q  101 ttgatgttatgattgatgaataattgcttgggtatgcatattcatggattg 151  Q
    ||||| |||||| | |||||||||||||||||| |||||||||||||||||    
T  25292545 ttgatattatgactaatgaataattgcttgggtttgcatattcatggattg 25292595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 157
Target Start/End: Complemental strand, 13572717 - 13572676
Alignment:
Q  116 atgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    |||||||||||||||||| ||||||||||||||||| |||||    
T  13572717 atgaataattgcttgggtttgcatattcatggattgttgatg 13572676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 157
Target Start/End: Complemental strand, 3060010 - 3059966
Alignment:
Q  113 ttgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||||||| |||||||||||||||||||||||| ||||| ||||    
T  3060010 ttgatgaatcattgcttgggtatgcatattcatgaattgaggatg 3059966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 157
Target Start/End: Original strand, 13037233 - 13037277
Alignment:
Q  113 ttgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||||||| |||||||||||||||||||||||| ||||| ||||    
T  13037233 ttgatgaatcattgcttgggtatgcatattcatgaattgaggatg 13037277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 84; Significance: 5e-40; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 51158105 - 51158216
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggta-attgaggtttgattcttgttca 99  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || |||||| | |||||||||||||    
T  51158105 attacatgttcaaatatgtaaaaatgataagttgtgaaaattgtgctcaattggtgaattttgctaagttgttgttagattgagttatgattcttgttca 51158204  T
Q  100 attgatgttatg 111  Q
    ||||||||||||    
T  51158205 attgatgttatg 51158216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 15936714 - 15936825
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggtaa-ttgaggtttgattcttgttca 99  Q
    ||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||| ||||| |||||||||||||||    
T  15936714 attacatgttcaaatgtgtaaaaatgataagttgtgaaaattgtgctcaattggtgaattttgataagttgttgttaatttgagatttgattcttgttca 15936813  T
Q  100 attgatgttatg 111  Q
    ||||||||||||    
T  15936814 attgatgttatg 15936825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 15938556 - 15938667
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggtaa-ttgaggtttgattcttgttca 99  Q
    ||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||| ||||| |||||||||||||||    
T  15938556 attacatgttcaaatgtgtaaaaatgataagttgtgaaaattgtgctcaattggtgaattttgataagttgttgttaatttgagatttgattcttgttca 15938655  T
Q  100 attgatgttatg 111  Q
    ||||||||||||    
T  15938656 attgatgttatg 15938667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 111
Target Start/End: Original strand, 14842652 - 14842759
Alignment:
Q  5 catgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggtaa-ttgaggtttgattcttgttcaattg 103  Q
    ||||||||| | ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||    
T  14842652 catgttcaaatgtgtaaaaatgataagttatgaaaattgtgctcaattggtgaattttgctaagttgttgttaatttgagatttgattcttgttcaattg 14842751  T
Q  104 atgttatg 111  Q
    ||||||||    
T  14842752 atgttatg 14842759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 15859111 - 15859222
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggt-aattgaggtttgattcttgttca 99  Q
    ||||||||||||| |||| | |||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||| | |||||||||||||    
T  15859111 attacatgttcaaatatgaacaaatgataagttgtgaaaattgtgctcaattggtgaattttgctaagttgttgttgaattgagttatgattcttgttca 15859210  T
Q  100 attgatgttatg 111  Q
    ||||||||||||    
T  15859211 attgatgttatg 15859222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 2049986 - 2049875
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggtaa-ttgaggtttgattcttgttca 99  Q
    ||||||||||||| |||||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||| |||||||    
T  2049986 attacatgttcaaatatgtaaacatgataacttgtgaaaattgtgctcaattggtgaattttgctaagttgttgttaatttgagatttgatttttgttca 2049887  T
Q  100 attgatgttatg 111  Q
    ||||||| ||||    
T  2049886 attgatgctatg 2049875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 12030234 - 12030345
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggtaa-ttgaggtttgattcttgttca 99  Q
    ||||||||||||| ||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||| ||| ||| ||||  |||||||||||||||    
T  12030234 attacatgttcaaatatgtaaaagtgataagttgtgaaagttgtgctcaattggtgaattttgctaagttattgttaatttgatatttgattcttgttca 12030333  T
Q  100 attgatgttatg 111  Q
    ||||||| ||||    
T  12030334 attgatgctatg 12030345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 15615010 - 15614899
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggtaa-ttgaggtttgattcttgttca 99  Q
    ||||||||||||| ||||||||||||||||||||| || || |||||||||||||||||||||||||||| ||| ||| ||| | ||||||||||| |||    
T  15615010 attacatgttcaaatatgtaaaaatgataagttgtgaatatggtgctcaattggtgaattttgctaagttattgttaatttgggatttgattcttgctca 15614911  T
Q  100 attgatgttatg 111  Q
    ||||||||||||    
T  15614910 attgatgttatg 15614899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 13839070 - 13838959
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggt-aattgaggtttgattcttgttca 99  Q
    ||||||||||||| || | | |||||||||||||| |||||||||||||||||||||||||||||||||||| | |  |||||| | |||||||||||||    
T  13839070 attacatgttcaaataggaacaaatgataagttgtgaaaattgtgctcaattggtgaattttgctaagttgtggttggattgagttatgattcttgttca 13838971  T
Q  100 attgatgttatg 111  Q
    ||||||||||||    
T  13838970 attgatgttatg 13838959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 99 - 157
Target Start/End: Original strand, 14842766 - 14842824
Alignment:
Q  99 aattgatgttatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  14842766 aattgatgttatgattgatgaataattgattgggtttgcatattcatggattgatgatg 14842824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 41270252 - 41270139
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattt-tgctaagttgttggtaa-ttgaggtttgattcttgttc 98  Q
    ||||||||||||  |||| |||||||||||||| | || |||||||||||||||||||||| | ||||||||||| ||| ||||| | |||| |||||||    
T  41270252 attacatgttcatatatgcaaaaatgataagttatgaatattgtgctcaattggtgaatttctcctaagttgttgttaagttgagatgtgatgcttgttc 41270153  T
Q  99 aattgatgttatga 112  Q
    || |||||||||||    
T  41270152 aaatgatgttatga 41270139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 55316396 - 55316283
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattt-tgctaagttgttggtaa-ttgaggtttgattcttgttc 98  Q
    ||||||||||||  |||| |||||||||||||| | || |||||||||||||||||||||| | ||||||||||| ||| ||||| | |||| |||||||    
T  55316396 attacatgttcatatatgcaaaaatgataagttatgaatattgtgctcaattggtgaatttctcctaagttgttgttaagttgagatgtgatgcttgttc 55316297  T
Q  99 aattgatgttatga 112  Q
    || |||||||||||    
T  55316296 aaatgatgttatga 55316283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 157
Target Start/End: Complemental strand, 16821195 - 16821139
Alignment:
Q  101 ttgatgttatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  16821195 ttgatattatgattgatgaataattgcttgggtttgcatattcatggattaatgatg 16821139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 13975808 - 13975921
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattt-tgctaagttgttggtaa-ttgaggtttgattcttgttc 98  Q
    |||||||||| || || |||||||||||||||| | || |||||||||||||||||||||| | |||||||||   ||| ||||| | |||| |||||||    
T  13975808 attacatgtttaaataagtaaaaatgataagttatgaatattgtgctcaattggtgaatttctcctaagttgtcattaatttgagatgtgatgcttgttc 13975907  T
Q  99 aattgatgttatga 112  Q
    || |||||||||||    
T  13975908 aaatgatgttatga 13975921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 16821316 - 16821203
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattt-tgctaagttgttggt-aattgaggtttgattcttgttc 98  Q
    ||||||||||||| |||||||||||| |||| | | |  |||||||| ||||||||||||| | ||||||||||| | | ||||| | |||||| |||||    
T  16821316 attacatgttcaaatatgtaaaaatgttaagctatgagtattgtgctaaattggtgaatttctcctaagttgttgttgatttgagatgtgattcatgttc 16821217  T
Q  99 aattgatgttatga 112  Q
    ||||||||||||||    
T  16821216 aattgatgttatga 16821203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 45860982 - 45860869
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattt-tgctaagttgttggtaa-ttgaggtttgattcttgttc 98  Q
    |||||||||| || || |||||||||||||||| | || |||||||||||||||||||||| | |||||||||   ||| ||||| | |||| |||||||    
T  45860982 attacatgtttaaataagtaaaaatgataagttatgaatattgtgctcaattggtgaatttctcctaagttgtcattaatttgagatgtgatgcttgttc 45860883  T
Q  99 aattgatgttatga 112  Q
    || |||||||||||    
T  45860882 aaatgatgttatga 45860869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 157
Target Start/End: Original strand, 15936843 - 15936890
Alignment:
Q  110 tgattgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||    
T  15936843 tgattgatgaataattgcctgagtatgcatattcatggattgatgatg 15936890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 157
Target Start/End: Original strand, 13955104 - 13955153
Alignment:
Q  108 tatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||||| |||||||||||||||||| ||||||||||||||||| |||||    
T  13955104 tatgattaatgaataattgcttgggtttgcatattcatggattgttgatg 13955153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 157
Target Start/End: Original strand, 13975936 - 13975985
Alignment:
Q  108 tatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||||| |||||||||||||||||| ||||||||||||||||| |||||    
T  13975936 tatgattaatgaataattgcttgggtttgcatattcatggattgttgatg 13975985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 116 - 157
Target Start/End: Complemental strand, 41270116 - 41270075
Alignment:
Q  116 atgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  41270116 atgaataattgcttgggtttgcatattcatggattgatgatg 41270075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 157
Target Start/End: Complemental strand, 45860854 - 45860805
Alignment:
Q  108 tatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||||| |||||||||||||||||| ||||||||||||||||| |||||    
T  45860854 tatgattaatgaataattgcttgggtttgcatattcatggattgttgatg 45860805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 116 - 157
Target Start/End: Complemental strand, 55316260 - 55316219
Alignment:
Q  116 atgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  55316260 atgaataattgcttgggtttgcatattcatggattgatgatg 55316219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 157
Target Start/End: Complemental strand, 2049854 - 2049810
Alignment:
Q  113 ttgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||    
T  2049854 ttgatgaatcattgcttgggtatgcatattcatgaattgatgatg 2049810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 157
Target Start/End: Original strand, 12030366 - 12030410
Alignment:
Q  113 ttgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||    
T  12030366 ttgatgaatcattgcttgggtatgcatattcatgaattgatgatg 12030410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 157
Target Start/End: Original strand, 15859243 - 15859287
Alignment:
Q  113 ttgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||    
T  15859243 ttgatgaatcattgcttgggtatgcatattcatgaattgatgatg 15859287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 15938685 - 15938729
Alignment:
Q  110 tgattgatgaataattgcttgggtatgcatattcatggattgatg 154  Q
    |||||||||||||||||| || |||||||||||||||||||||||    
T  15938685 tgattgatgaataattgcctgagtatgcatattcatggattgatg 15938729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 157
Target Start/End: Original strand, 17912686 - 17912744
Alignment:
Q  99 aattgatgttatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    |||||||||| |  ||||||||| | |||||||||||||||||||||| ||||||||||    
T  17912686 aattgatgttgttgttgatgaatcactgcttgggtatgcatattcatgaattgatgatg 17912744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 13954976 - 13955089
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattt-tgctaagttgttggtaa-ttgaggtttgattcttgttc 98  Q
    |||||||||| || || ||||||||||| |||| | || |||||||||||||| ||||||| | |||||||||   ||| ||||| | |||| |||||||    
T  13954976 attacatgtttaaataagtaaaaatgatcagttatgaatattgtgctcaattgatgaatttctcctaagttgtcattaatttgagatgtgatgcttgttc 13955075  T
Q  99 aattgatgttatga 112  Q
    || |||||||||||    
T  13955076 aaatgatgttatga 13955089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 157
Target Start/End: Original strand, 15468555 - 15468596
Alignment:
Q  116 atgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    |||||| |||||||||||||||||||||||| ||||||||||    
T  15468555 atgaatcattgcttgggtatgcatattcatgaattgatgatg 15468596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 51158237 - 51158282
Alignment:
Q  113 ttgatgaataattgcttgggtatgcatattcatggattgatgatgt 158  Q
    ||||||||| |||||||||||||||||||||||| ||||| |||||    
T  51158237 ttgatgaatcattgcttgggtatgcatattcatgaattgaggatgt 51158282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 153
Target Start/End: Complemental strand, 15614878 - 15614838
Alignment:
Q  113 ttgatgaataattgcttgggtatgcatattcatggattgat 153  Q
    ||||||||| |||||||||||||||||||||||| ||||||    
T  15614878 ttgatgaatcattgcttgggtatgcatattcatgaattgat 15614838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 157
Target Start/End: Original strand, 16744333 - 16744377
Alignment:
Q  113 ttgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||||||| ||||||||||||| ||| |||||||||||||||||    
T  16744333 ttgatgaatcattgcttgggtatacatgttcatggattgatgatg 16744377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 17912569 - 17912678
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggt-aattgaggtttgattcttgttca 99  Q
    |||||||||| || ||||||||||||| ||||| | ||||||||||  ||||| |||| |||| || ||||| | | ||||||| | |||||| ||||||    
T  17912569 attacatgtttaaatatgtaaaaatgaaaagttatgaaaattgtgcaaaattgatgaa-tttgatatgttgtagttgaattgagctatgattcatgttca 17912667  T
Q  100 attgatgttat 110  Q
    || ||||||||    
T  17912668 atcgatgttat 17912678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 157
Target Start/End: Complemental strand, 47984708 - 47984650
Alignment:
Q  99 aattgatgttatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    |||||||||| |  ||||||||| ||  |||||||||||||||||||| ||||||||||    
T  47984708 aattgatgttgttgttgatgaatcatgacttgggtatgcatattcatgaattgatgatg 47984650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 157
Target Start/End: Complemental strand, 48003282 - 48003224
Alignment:
Q  99 aattgatgttatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    |||||||||| |  ||||||||| ||  |||||||||||||||||||| ||||||||||    
T  48003282 aattgatgttgttgttgatgaatcatgacttgggtatgcatattcatgaattgatgatg 48003224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 157
Target Start/End: Complemental strand, 22275250 - 22275209
Alignment:
Q  116 atgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    |||||| ||||||| |||||||||||||||| ||||||||||    
T  22275250 atgaatcattgcttaggtatgcatattcatgaattgatgatg 22275209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 11986291 - 11986327
Alignment:
Q  38 aaattgtgctcaattggtgaattttgctaagttgttg 74  Q
    ||||||||||||| | |||||||||||||||||||||    
T  11986291 aaattgtgctcaaatagtgaattttgctaagttgttg 11986327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 157
Target Start/End: Complemental strand, 47993981 - 47993937
Alignment:
Q  113 ttgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||||||| ||  |||||||||||||||||||| ||||||||||    
T  47993981 ttgatgaatcatgacttgggtatgcatattcatgaattgatgatg 47993937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 157
Target Start/End: Complemental strand, 48012554 - 48012510
Alignment:
Q  113 ttgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||||||| ||  |||||||||||||||||||| ||||||||||    
T  48012554 ttgatgaatcatgacttgggtatgcatattcatgaattgatgatg 48012510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 1043 - 1218
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggtaattgaggtttgattcttgttc-- 98  Q
    ||||||||||||| ||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||| ||| ||||||||||      
T  1043 attacatgttcaaatatgtaaaaataataagttgtgaaaattgtgctcaattgatgaattttgctaagttgttgttaattgagattttattcttgttcaa 1142  T
Q  99 -----------------aattgatgttatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
                     |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1143 gtgatgttatggatgttaatttatgttatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 1218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 80; Significance: 1e-37; HSPs: 4)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 107923 - 107812
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggtaa-ttgaggtttgattcttgttca 99  Q
    ||||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||| |||||||||||||||    
T  107923 attacatgttcaaatgtgcaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgataagttgttgttaatttgagatttgattcttgttca 107824  T
Q  100 attgatgttatg 111  Q
    ||||||||||||    
T  107823 attgatgttatg 107812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 64603 - 64716
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattt-tgctaagttgttggtaa-ttgaggtttgattcttgttc 98  Q
    |||||||||| || ||||||||||||||||||| | || |||||||||||||||||||||| | ||||||||||| ||| ||||| | |||| |||||||    
T  64603 attacatgtttaaatatgtaaaaatgataagttatgaatattgtgctcaattggtgaatttctcctaagttgttgttaatttgagatgtgatgcttgttc 64702  T
Q  99 aattgatgttatga 112  Q
    || |||||||||||    
T  64703 aaatgatgttatga 64716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 110 - 157
Target Start/End: Complemental strand, 107794 - 107747
Alignment:
Q  110 tgattgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  107794 tgattgatgaataattgcttgggtttgcatattcatggattgatgatg 107747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 157
Target Start/End: Original strand, 64739 - 64780
Alignment:
Q  116 atgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    |||||||||||||||||| ||||||||||||||||| |||||    
T  64739 atgaataattgcttgggtttgcatattcatggattgttgatg 64780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 1e-37; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 462914 - 462803
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggta-attgaggtttgattcttgttca 99  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| || |||||| | |||||||||||||    
T  462914 attacatgttcaaatatgtaaaaatgataagttgtgaaaattgtgttcaattggtgaattttgctaagttgttgttagattgagttatgattcttgttca 462815  T
Q  100 attgatgttatg 111  Q
    ||||||||||||    
T  462814 attgatgttatg 462803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 36982528 - 36982638
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggt-aattgaggtttgattcttgttca 99  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| | ||||||| | |||||| ||||||    
T  36982528 attacatgttcaaatatgtaaaaatgataagttgtgaaaattgtgctcaattggtgaattttgccaagttgttgttgaattgagttatgattcctgttca 36982627  T
Q  100 attgatgttat 110  Q
    |||||||||||    
T  36982628 attgatgttat 36982638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 8891418 - 8891307
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggta-attgaggtttgattcttgttca 99  Q
    ||||||||||||| || | | |||||||||||||| |||||||||||||||||||||||||||||||||||||| || |||||| | |||||||||||||    
T  8891418 attacatgttcaaataggaacaaatgataagttgtgaaaattgtgctcaattggtgaattttgctaagttgttgttagattgagttatgattcttgttca 8891319  T
Q  100 attgatgttatg 111  Q
    ||||||||||||    
T  8891318 attgatgttatg 8891307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 19794791 - 19794901
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggt-aattgaggtttgattcttgttca 99  Q
    ||||||||||||| || | | |||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||| | |||||||||||||    
T  19794791 attacatgttcaaataggaacaaatgataagttgtgaaaattgtgctcaattggtgaattttgctaagttgttgttgaattgagttatgattcttgttca 19794890  T
Q  100 attgatgttat 110  Q
    |||||||||||    
T  19794891 attgatgttat 19794901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 24341476 - 24341586
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggt-aattgaggtttgattcttgttca 99  Q
    |||| |||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||||| | ||||||| | |||||| ||||||    
T  24341476 attatatgttcaattatgtaaaaatgtgaagttgtgaaaattgtgctcaattggtgaattttgctaagttgttgttgaattgagatatgattcatgttca 24341575  T
Q  100 attgatgttat 110  Q
    |||||||||||    
T  24341576 attgatgttat 24341586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 20627400 - 20627511
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggtaa-ttgaggtttgattcttgttca 99  Q
    ||||||||| ||| |||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||| ||| ||||| ||| |||||||||||    
T  20627400 attacatgtccaaatatgtaaaaatgataacttgtgaaaattgtgctcaattggtgaattttgttaagttgttgttaatttgagatttaattcttgttca 20627499  T
Q  100 attgatgttatg 111  Q
    |||||| |||||    
T  20627500 attgattttatg 20627511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 7507931 - 7508041
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggtaattgaggtttgattcttg-ttca 99  Q
    ||||||||||||| ||||||||||| ||||||| | ||||||||| ||||||||||||||| |||||||||||| |||||||| | |||||| || || |    
T  7507931 attacatgttcaaatatgtaaaaataataagttatgaaaattgtgttcaattggtgaatttggctaagttgttgttaattgagatatgattcatgtttta 7508030  T
Q  100 attgatgttat 110  Q
    |||||||||||    
T  7508031 attgatgttat 7508041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 25265477 - 25265550
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttg 74  Q
    ||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||| |||||||    
T  25265477 attacatgttcaattatgtaaaaatgtgaagttgtgaaaattgtgctcaattggtgaattttgctatgttgttg 25265550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 101 - 157
Target Start/End: Original strand, 19886857 - 19886913
Alignment:
Q  101 ttgatgttatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19886857 ttgatattatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 19886913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 43643044 - 43643150
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggtaa-ttgaggtttgattcttgttca 99  Q
    ||||||||||||| || | | ||||| |||||||| |||||||||||||||||||||||||| || |||||||  ||| ||||| | |||||||||||||    
T  43643044 attacatgttcaaataggaacaaatgttaagttgtgaaaattgtgctcaattggtgaatttttcttagttgttattaatttgagatatgattcttgttca 43643143  T
Q  100 attgatg 106  Q
    |||||||    
T  43643144 attgatg 43643150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 17396739 - 17396852
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattt-tgctaagttgttggtaa-ttgaggtttgattcttgttc 98  Q
    |||||||||| || || |||||||||||||||| | || |||||||||||||||||||||| | |||||||||   ||| ||||| | |||| |||||||    
T  17396739 attacatgtttaaataagtaaaaatgataagttatgaatattgtgctcaattggtgaatttctcctaagttgtcattaatttgagatgtgatgcttgttc 17396838  T
Q  99 aattgatgttatga 112  Q
    || |||||||||||    
T  17396839 aaatgatgttatga 17396852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 113 - 157
Target Start/End: Original strand, 19794923 - 19794967
Alignment:
Q  113 ttgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||||||| |||||||||||||||||||||||||||||||||||    
T  19794923 ttgatgaatcattgcttgggtatgcatattcatggattgatgatg 19794967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 157
Target Start/End: Original strand, 7508063 - 7508107
Alignment:
Q  113 ttgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||||||| | |||||||||||||||||||||||||||||||||    
T  7508063 ttgatgaatcactgcttgggtatgcatattcatggattgatgatg 7508107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 157
Target Start/End: Original strand, 17396860 - 17396916
Alignment:
Q  101 ttgatgttatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||| |||||||| ||| |||||||||||||| ||||||||||||||||| |||||    
T  17396860 ttgatattatgattaatggataattgcttgggtttgcatattcatggattgttgatg 17396916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 152
Target Start/End: Complemental strand, 462785 - 462743
Alignment:
Q  110 tgattgatgaataattgcttgggtatgcatattcatggattga 152  Q
    |||||||||||| |||||||||||||||||||||||| |||||    
T  462785 tgattgatgaatcattgcttgggtatgcatattcatgaattga 462743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 19886736 - 19886837
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattt-tgctaagttgttggtaa-ttgaggtttgattcttgttc 98  Q
    ||||||||||||  |||| |||| ||||||||| | || |||||||| || |||||||||| | ||||||||||| ||| ||||| | ||||||||||||    
T  19886736 attacatgttcatatatgcaaaagtgataagttatgaagattgtgctaaagtggtgaatttctcctaagttgttgttaatttgagttgtgattcttgttc 19886835  T
Q  99 aa 100  Q
    ||    
T  19886836 aa 19886837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 157
Target Start/End: Complemental strand, 8891286 - 8891242
Alignment:
Q  113 ttgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||||||| |||||||||||||||||||||||| ||||| ||||    
T  8891286 ttgatgaatcattgcttgggtatgcatattcatgaattgaggatg 8891242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 157
Target Start/End: Original strand, 24341608 - 24341652
Alignment:
Q  113 ttgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||||||| ||||||||||||| |||||||||| ||||||||||    
T  24341608 ttgatgaatcattgcttgggtatacatattcatgaattgatgatg 24341652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 157
Target Start/End: Original strand, 36982660 - 36982704
Alignment:
Q  113 ttgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||||||| |||| ||||||||||||||||||| ||||||||||    
T  36982660 ttgatgaatcattgtttgggtatgcatattcatgaattgatgatg 36982704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 157
Target Start/End: Original strand, 43643176 - 43643220
Alignment:
Q  113 ttgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||||||| | |||||||||||||||||||||| ||||||||||    
T  43643176 ttgatgaatcactgcttgggtatgcatattcatgaattgatgatg 43643220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 157
Target Start/End: Original strand, 25265595 - 25265653
Alignment:
Q  99 aattgatgttatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    |||||||||| |  || |||||| || ||||||||||||||||||||| ||||||||||    
T  25265595 aattgatgttgttgtttatgaatcatggcttgggtatgcatattcatgaattgatgatg 25265653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 157
Target Start/End: Original strand, 20627532 - 20627576
Alignment:
Q  113 ttgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||||||| |||||||||||||| ||||||||| ||||| ||||    
T  20627532 ttgatgaatcattgcttgggtatggatattcatgaattgaggatg 20627576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 79; Significance: 5e-37; HSPs: 4)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 19382 - 19272
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggt-aattgaggtttgattcttgttca 99  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||| | |||||| ||||||    
T  19382 attacatgttcaaatatgtaaaaatgataagttgtgaaaattgtgctcaattggtgaattttgctaagttgttgttgaattgagttatgattcctgttca 19283  T
Q  100 attgatgttat 110  Q
    |||||||||||    
T  19282 attgatgttat 19272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 21466 - 21356
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggt-aattgaggtttgattcttgttca 99  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||| | |||||| ||||||    
T  21466 attacatgttcaaatatgtaaaaatgataagttgtgaaaattgtgctcaattggtgaattttgctaagttgttgttgaattgagttatgattcctgttca 21367  T
Q  100 attgatgttat 110  Q
    |||||||||||    
T  21366 attgatgttat 21356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 157
Target Start/End: Complemental strand, 19250 - 19206
Alignment:
Q  113 ttgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||    
T  19250 ttgatgaatcattgcttgggtatgcatattcatgaattgatgatg 19206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 157
Target Start/End: Complemental strand, 21334 - 21290
Alignment:
Q  113 ttgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||    
T  21334 ttgatgaatcattgcttgggtatgcatattcatgaattgatgatg 21290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 79; Significance: 5e-37; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 48363 - 48253
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggtaa-ttgaggtttgattcttgttca 99  Q
    ||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||| ||||| |||||||||||||||    
T  48363 attacatgttcaaatgtgtaaaaatgataagttgtgaaaattgtgctcaattggtgaattttgttaagttgttgttaatttgagatttgattcttgttca 48264  T
Q  100 attgatgttat 110  Q
    |||||||||||    
T  48263 attgatgttat 48253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 110 - 157
Target Start/End: Complemental strand, 48234 - 48187
Alignment:
Q  110 tgattgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||    
T  48234 tgattgatgaataattgcctgggtatgcatattcatggattgatgatg 48187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 77; Significance: 7e-36; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 5291 - 5403
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggtaa-ttgaggtttgattcttgttca 99  Q
    ||||||||||||| ||||||||||||||||||| | ||||||||| ||||||||||||||||||| |||||||| ||| ||||| |||||||||||||||    
T  5291 attacatgttcaaatatgtaaaaatgataagttatgaaaattgtgttcaattggtgaattttgctgagttgttgttaatttgagatttgattcttgttca 5390  T
Q  100 attgatgttatga 112  Q
    |||||||||||||    
T  5391 attgatgttatga 5403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 157
Target Start/End: Original strand, 5426 - 5466
Alignment:
Q  116 atgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  5426 atgaataattgcttgggt-tgcatattcatggattgatgatg 5466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 74; Significance: 4e-34; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 12287 - 12179
Alignment:
Q  3 tacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggtaattgaggtttgattcttgttcaatt 102  Q
    |||||||| || | ||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||    
T  12287 tacatgtttaaatgtgtaaaaatgataagttgtgaaaattgtgctaaattggtgaattttgttaagttgtt-gtaattgagatttgattcttgttcaatt 12189  T
Q  103 gatgttatga 112  Q
    ||||||||||    
T  12188 gatgttatga 12179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 116 - 157
Target Start/End: Complemental strand, 12156 - 12115
Alignment:
Q  116 atgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  12156 atgaataattgcttgggtatgcatattcatggattgatgatg 12115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 74; Significance: 4e-34; HSPs: 2)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 5150 - 5259
Alignment:
Q  3 tacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggta-attgaggtttgattcttgttcaat 101  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| || | |||| | |||||||||||||||    
T  5150 tacatgttcaaatatgtaaaaatgataagttgtgaaaattgtgctcaattggtgaattttgcaaagttgttgttagaatgagttatgattcttgttcaat 5249  T
Q  102 tgatgttatg 111  Q
    ||||||||||    
T  5250 tgatgttatg 5259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 157
Target Start/End: Original strand, 5277 - 5324
Alignment:
Q  110 tgattgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    |||||||||||| |||||||||||||||||||||||| ||||| ||||    
T  5277 tgattgatgaatcattgcttgggtatgcatattcatgaattgaggatg 5324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 74; Significance: 4e-34; HSPs: 3)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 26504 - 26613
Alignment:
Q  3 tacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggta-attgaggtttgattcttgttcaat 101  Q
    ||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| || | |||| | |||||||||||||||    
T  26504 tacatgttcaaatatgtaaaaatgataagttgtgaaaattgttctcaattggtgaattttgctaagttgttgttagaatgagttatgattcttgttcaat 26603  T
Q  102 tgatgttatg 111  Q
    ||||||||||    
T  26604 tgatgttatg 26613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 8267 - 8340
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttg 74  Q
    |||||| |||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||| |||||||    
T  8267 attacaggttcaattatgtaaaaatgtgaagttgtgaaaattgtgctcaattggtgaattttgctatgttgttg 8340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 157
Target Start/End: Original strand, 26631 - 26678
Alignment:
Q  110 tgattgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    |||||||||||| |||||||||||||||||||| ||| ||||| ||||    
T  26631 tgattgatgaatcattgcttgggtatgcatattgatgaattgaggatg 26678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 72; Significance: 7e-33; HSPs: 4)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 9424 - 9535
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggtaa-ttgaggtttgattcttgttca 99  Q
    ||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||| ||| ||||| ||||||||||| |||    
T  9424 attacatgttcaaatatgtaaaaatgataagttgtgaaaatggtgctcaattggtgaattttgctaagttattgttaatttgagatttgattcttgctca 9523  T
Q  100 attgatgttatg 111  Q
    | ||||||||||    
T  9524 aatgatgttatg 9535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 16322 - 16433
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggtaa-ttgaggtttgattcttgttca 99  Q
    ||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||| ||| ||||| ||||||||||| |||    
T  16322 attacatgttcaaatatgtaaaaatgataagttgtgaaaatggtgctcaattggtgaattttgctaagttattgttaatttgagatttgattcttgctca 16421  T
Q  100 attgatgttatg 111  Q
    | ||||||||||    
T  16422 aatgatgttatg 16433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 153
Target Start/End: Original strand, 9556 - 9596
Alignment:
Q  113 ttgatgaataattgcttgggtatgcatattcatggattgat 153  Q
    ||||||||| |||||||||||||||||||||||| ||||||    
T  9556 ttgatgaatcattgcttgggtatgcatattcatgaattgat 9596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 153
Target Start/End: Original strand, 16454 - 16494
Alignment:
Q  113 ttgatgaataattgcttgggtatgcatattcatggattgat 153  Q
    ||||||||| |||||||||||||||||||||||| ||||||    
T  16454 ttgatgaatcattgcttgggtatgcatattcatgaattgat 16494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 41905 - 41794
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggta-attgaggtttgattcttgttca 99  Q
    |||||||| |||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| || |||||| | |||||||||||||    
T  41905 attacatgctcaaatatgtaaaaatgataatttgtgaaaattgtgctcaattggtgaattttgctaagttgttgttagattgagttatgattcttgttca 41806  T
Q  100 attgatgttatg 111  Q
    ||||||| ||||    
T  41805 attgatgctatg 41794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 72; Significance: 7e-33; HSPs: 4)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 48774 - 48663
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggta-attgaggtttgattcttgttca 99  Q
    ||||||||||||| || | |||||||||||||||| ||||||||||||| |||||||||||||||||||||||| || |||||| | |||||||||||||    
T  48774 attacatgttcaaataggaaaaaatgataagttgtgaaaattgtgctcagttggtgaattttgctaagttgttgctagattgagttatgattcttgttca 48675  T
Q  100 attgatgttatg 111  Q
    ||||||||||||    
T  48674 attgatgttatg 48663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 157
Target Start/End: Complemental strand, 36142 - 36093
Alignment:
Q  108 tatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  36142 tatgattgatgaataattgcttgggtttgcatattcatggattgatgatg 36093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 36270 - 36157
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattt-tgctaagttgttggtaa-ttgaggtttgattcttgttc 98  Q
    ||||||| ||||  |||| |||||||||||||| | || |||||||| ||||||||||||| | ||||||||||| ||| ||||| | |||||| |||||    
T  36270 attacatattcatatatgcaaaaatgataagttatgaagattgtgctaaattggtgaatttctcctaagttgttgttaatttgagatgtgattcatgttc 36171  T
Q  99 aattgatgttatga 112  Q
    ||| ||||||||||    
T  36170 aatagatgttatga 36157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 157
Target Start/End: Complemental strand, 48642 - 48598
Alignment:
Q  113 ttgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||    
T  48642 ttgatgaatcattgcttgggtatgcatattcatgaattgatgatg 48598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 3e-32; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 1650180 - 1650290
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggtaa-ttgaggtttgattcttgttca 99  Q
    ||||||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| | | ||| ||||| ||||||||||| |||    
T  1650180 attacatgttcaaatatgtaagaatgataagttgtgaaaattgtgctcaattggtgaattttgctaagttatggttaatttgagatttgattcttgctca 1650279  T
Q  100 attgatgttat 110  Q
    |||||||||||    
T  1650280 attgatgttat 1650290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 14626205 - 14626316
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggtaa-ttgaggtttgattcttgttca 99  Q
    ||||||||||||| ||||||||||||||||||| | |||||||||  ||||||||||||| ||||||||||||| ||| ||||| ||||||||||| |||    
T  14626205 attacatgttcaaatatgtaaaaatgataagttatgaaaattgtgtgcaattggtgaattatgctaagttgttgttaacttgagatttgattcttgctca 14626304  T
Q  100 attgatgttatg 111  Q
    ||||||||||||    
T  14626305 attgatgttatg 14626316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 23153623 - 23153512
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggta-attgaggtttgattcttgttca 99  Q
    ||||||||||||| || | | |||||||||||||| |||||||||||||||||||||||||||||||||||||| || |||||| | |||||||||||||    
T  23153623 attacatgttcaaataggaacaaatgataagttgtgaaaattgtgctcaattggtgaattttgctaagttgttgttagattgagttatgattcttgttca 23153524  T
Q  100 attgatgttatg 111  Q
    |||||| |||||    
T  23153523 attgatattatg 23153512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 1657838 - 1657944
Alignment:
Q  4 acatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggtaattgaggtttgattcttgttcaattg 103  Q
    |||||||||||||||||||||||  ||||| | ||||||||||||||||| || ||||||||||||| |||  ||||||| | ||||||||||||| |||    
T  1657838 acatgttcaattatgtaaaaatgtgaagttatgaaaattgtgctcaattgatggattttgctaagttattgtgaattgagttatgattcttgttcagttg 1657937  T
Q  104 atgttat 110  Q
    |||||||    
T  1657938 atgttat 1657944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 35009526 - 35009599
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttg 74  Q
    ||||||||||||||||||||||||||  ||||| | |||||||||||||||||||||||||||||| |||||||    
T  35009526 attacatgttcaattatgtaaaaatgtgaagttttgaaaattgtgctcaattggtgaattttgctatgttgttg 35009599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 101 - 157
Target Start/End: Complemental strand, 25175619 - 25175563
Alignment:
Q  101 ttgatgttatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25175619 ttgatattatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 25175563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 29666012 - 29665892
Alignment:
Q  38 aaattgtgctcaattggtgaattttgctaagttgttggt-aattgaggtttgattcttgttcaattgatgttatgattgatgaataattgcttgggtatg 136  Q
    ||||||| ||||||||||||||||||||||||||||| | || |||| | |||||| ||||||||||||||| |  | | ||||| ||  ||||||||||    
T  29666012 aaattgtactcaattggtgaattttgctaagttgttgttgaaatgagatatgattcatgttcaattgatgttgttgtgggtgaatcatgacttgggtatg 29665913  T
Q  137 catattcatggattgatgatg 157  Q
    ||||||||||||||| |||||    
T  29665912 catattcatggattggtgatg 29665892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 157
Target Start/End: Original strand, 27654179 - 27654235
Alignment:
Q  101 ttgatgttatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  27654179 ttgatattatgattgatgaataattgcttgggtatgcatattcatggattaatgatg 27654235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 4 - 99
Target Start/End: Complemental strand, 15862644 - 15862549
Alignment:
Q  4 acatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggtaattgaggtttgattcttgttca 99  Q
    ||||||||||||||||| |||||  ||||| | ||||||||||||||||| || ||||||||||||| |||  ||||||| | |||||||||||||    
T  15862644 acatgttcaattatgtataaatgtgaagttatgaaaattgtgctcaattgatggattttgctaagttattgtgaattgagttatgattcttgttca 15862549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 27654058 - 27654171
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattt-tgctaagttgttggtaa-ttgaggtttgattcttgttc 98  Q
    ||||||||||||  |||| |||||||||||||| | || |||||||| ||||||||||||| | ||||||||||| ||| ||||| | ||||||||||||    
T  27654058 attacatgttcatatatgcaaaaatgataagttatgaagattgtgctaaattggtgaatttctcctaagttgttgttaatttgagttgtgattcttgttc 27654157  T
Q  99 aattgatgttatga 112  Q
     | |||||||||||    
T  27654158 caatgatgttatga 27654171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 16825951 - 16826006
Alignment:
Q  102 tgatgttatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    |||| ||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  16825951 tgatattatgattgatgaataattgctttgttatgcatattcatggattgatgatg 16826006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 38 - 107
Target Start/End: Complemental strand, 27740977 - 27740907
Alignment:
Q  38 aaattgtgctcaattggtgaattttgctaagttgttggt-aattgaggtttgattcttgttcaattgatgt 107  Q
    |||||||||||||||||||||||||||||||| |||| | ||||||| | |||||| ||||||||||||||    
T  27740977 aaattgtgctcaattggtgaattttgctaagtcgttgttgaattgagatatgattcatgttcaattgatgt 27740907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 16825829 - 16825942
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattt-tgctaagttgttggtaa-ttgaggtttgattcttgttc 98  Q
    ||||||||||||  |||| |||||||||||||| | || |||||||| |||||||| |||| | |||| |||||| ||| ||||| | ||||||||||||    
T  16825829 attacatgttcatatatgcaaaaatgataagttatgaagattgtgctaaattggtggatttctcctaatttgttgttaatttgagttgtgattcttgttc 16825928  T
Q  99 aattgatgttatga 112  Q
    || |||||||||||    
T  16825929 aaatgatgttatga 16825942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 25175740 - 25175639
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattt-tgctaagttgttggtaa-ttgaggtttgattcttgttc 98  Q
    ||||||||||||  |||| |||||||||||||| | || |||||||| ||||||||||||| | ||||||||||| ||| ||||| | ||||||||||||    
T  25175740 attacatgttcatatatgcaaaaatgataagttatgaagattgtgctaaattggtgaatttctcctaagttgttgttaatttgagttgtgattcttgttc 25175641  T
Q  99 aa 100  Q
    ||    
T  25175640 aa 25175639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 157
Target Start/End: Original strand, 35009644 - 35009702
Alignment:
Q  99 aattgatgttatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    |||||||||| |  ||||||||| |||||||||||||||||||||||| ||||||||||    
T  35009644 aattgatgttgttgttgatgaatcattgcttgggtatgcatattcatgaattgatgatg 35009702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 153
Target Start/End: Original strand, 14626337 - 14626377
Alignment:
Q  113 ttgatgaataattgcttgggtatgcatattcatggattgat 153  Q
    ||||||||| |||||||||||||||||||||||| ||||||    
T  14626337 ttgatgaatcattgcttgggtatgcatattcatgaattgat 14626377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 153
Target Start/End: Original strand, 1650312 - 1650352
Alignment:
Q  113 ttgatgaataattgcttgggtatgcatattcatggattgat 153  Q
    ||||||||| | |||||||||||||||||||||| ||||||    
T  1650312 ttgatgaatcactgcttgggtatgcatattcatgaattgat 1650352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 69; Significance: 4e-31; HSPs: 4)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 21191 - 21303
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggtaa-ttgaggtttgattcttgttca 99  Q
    ||||||||||||| ||||||||||||||||||| | || |||| |||||||||||||||||| ||||||||||| ||| ||||| || ||||||||||||    
T  21191 attacatgttcaaatatgtaaaaatgataagttatgaagattgagctcaattggtgaattttcctaagttgttgttaatttgagattggattcttgttca 21290  T
Q  100 attgatgttatga 112  Q
    |||||||||||||    
T  21291 attgatgttatga 21303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 14136 - 14248
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggtaa-ttgaggtttgattcttgttca 99  Q
    |||||||||| || ||||||||||||||||||| | || ||||||||||||||||||||||| ||||||||||| ||| ||||| || ||||||||||||    
T  14136 attacatgttgaaatatgtaaaaatgataagttatgaagattgtgctcaattggtgaattttcctaagttgttgataatttgagattggattcttgttca 14235  T
Q  100 attgatgttatga 112  Q
    ||| |||||||||    
T  14236 attaatgttatga 14248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 157
Target Start/End: Original strand, 14256 - 14312
Alignment:
Q  101 ttgatgttatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  14256 ttgatgttatgattgatgaataattgcttgagtttgcatattcatggattgatgatg 14312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 157
Target Start/End: Original strand, 21311 - 21367
Alignment:
Q  101 ttgatgttatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||| ||||||    
T  21311 ttgatgttatgattgatgaataattgcttgagtttgcatattcatggattaatgatg 21367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 123251 - 123362
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggta-attgaggtttgattcttgttca 99  Q
    ||||||||||||| || | | |||||||||||||| |||||||||||||||||||||||||||||||||||||| || ||| || | |||||||||||||    
T  123251 attacatgttcaaataggaacaaatgataagttgtgaaaattgtgctcaattggtgaattttgctaagttgttgttagattaagttatgattcttgttca 123350  T
Q  100 attgatgttatg 111  Q
    ||||||||||||    
T  123351 attgatgttatg 123362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 157
Target Start/End: Original strand, 123383 - 123427
Alignment:
Q  113 ttgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    |||||||||||| ||||||||||||||||||||| ||||| ||||    
T  123383 ttgatgaataatggcttgggtatgcatattcatgaattgaagatg 123427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 67; Significance: 7e-30; HSPs: 4)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 128256 - 128366
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggtaattgaggtttgattcttgttcaa 100  Q
    ||||||||||||| | ||||||  || |||||||| |||||||||||||||||| |||||||| || ||||||| |||||||| ||||||||||||||||    
T  128256 attacatgttcaaatgtgtaaaggtgttaagttgtgaaaattgtgctcaattggcgaattttgttaggttgttgttaattgagatttgattcttgttcaa 128355  T
Q  101 ttgatgttatg 111  Q
    |||||||||||    
T  128356 ttgatgttatg 128366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 107 - 157
Target Start/End: Original strand, 31878 - 31928
Alignment:
Q  107 ttatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  31878 ttatgattgatgaataattgcttgggtttgcatattcatggattaatgatg 31928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 157
Target Start/End: Original strand, 128384 - 128431
Alignment:
Q  110 tgattgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  128384 tgattgatgaataattgattgggtatgcatattcatgaattgatgatg 128431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 31750 - 31864
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattt-tgct-aagttgttggt-aattgaggtttgattcttgtt 97  Q
    ||||||| ||||  |||| |||||||||||||| | || ||| |||||||||||||||||| | || ||||||||| | | ||||| | |||||| ||||    
T  31750 attacatattcatatatgcaaaaatgataagttatgaatattatgctcaattggtgaatttctcctaaagttgttgttgatttgagatgtgattcatgtt 31849  T
Q  98 caattgatgttatga 112  Q
    |||||||||||||||    
T  31850 caattgatgttatga 31864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 3899 - 3786
Alignment:
Q  1 attacatgttcaattatgtaaaaa-tgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggtaa-ttgaggtttgattcttgttc 98  Q
    ||||||||||||| |||||||||| ||||||||| |  ||||||||  ||||||||||||||||||||||||||| ||| ||||| ||||||||||||||    
T  3899 attacatgttcaaatatgtaaaaaatgataagttatggaaattgtgtccaattggtgaattttgctaagttgttgttaatttgagatttgattcttgttc 3800  T
Q  99 aattgatgttatga 112  Q
    ||||||||||||||    
T  3799 aattgatgttatga 3786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 99 - 157
Target Start/End: Complemental strand, 3780 - 3722
Alignment:
Q  99 aattgatgttatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  3780 aattgatgttatgattgatgaataattacttgggtttgcatattcatggattgatgatg 3722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 112
Target Start/End: Original strand, 247533 - 247641
Alignment:
Q  5 catgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggta-attgaggtttgattcttgttcaattg 103  Q
    ||||||||| || | | |||||||||||||| ||||||||||||||||||| |||||||||||||||||| || |||||| | |||||||||||||||||    
T  247533 catgttcaaataggaacaaatgataagttgtgaaaattgtgctcaattggtaaattttgctaagttgttgttagattgagttatgattcttgttcaattg 247632  T
Q  104 atgttatga 112  Q
    |||||||||    
T  247633 atgttatga 247641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 146
Target Start/End: Original strand, 247661 - 247694
Alignment:
Q  113 ttgatgaataattgcttgggtatgcatattcatg 146  Q
    ||||||||| ||||||||||||||||||||||||    
T  247661 ttgatgaatcattgcttgggtatgcatattcatg 247694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 3139 - 3028
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggt-aattgaggtttgattcttg-ttc 98  Q
    ||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||||| | ||||||| | |||||| || ||     
T  3139 attacatgttcaattatgtaaaaatgtgaagttgtgaaaattgtgctcaattggtgaattttgctaagttgttgttgaattgagatatgattcatgtttt 3040  T
Q  99 aattgatgttat 110  Q
    ||||||||||||    
T  3039 aattgatgttat 3028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 64; Significance: 4e-28; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 37000 - 37111
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggt-aattgaggtttgattcttgttca 99  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| | |  |||||| | ||| |||||||||    
T  37000 attacatgttcaaatatgtaaaaatgataagttgtgaaaattgtgctaaattggtgaattttgctaagttgtggttggattgagttatgaatcttgttca 37099  T
Q  100 attgatgttatg 111  Q
    ||||| ||||||    
T  37100 attgacgttatg 37111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 157
Target Start/End: Original strand, 37132 - 37176
Alignment:
Q  113 ttgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||    
T  37132 ttgatgaatcattgcttgggtatgcatattcatgaattgatgatg 37176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 13400 - 13479
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggtaatt 80  Q
    ||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||| |||||    
T  13400 attacatgttcaaatatgtaaaaatgataagttgtgaaaatggtgctcaattggtgaattttgctaagttattgttaatt 13479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 172081 - 171970
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggt-aattgaggtttgattcttgttca 99  Q
    ||||||||||||| || | | |||||||||||||| ||||||||||| |||||||||||||||||||||||| | | ||||||| |  ||||||||||||    
T  172081 attacatgttcaaataggaacaaatgataagttgtgaaaattgtgctaaattggtgaattttgctaagttgtggttgaattgagttacgattcttgttca 171982  T
Q  100 attgatgttatg 111  Q
    ||||||||||||    
T  171981 attgatgttatg 171970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 177784 - 177673
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggt-aattgaggtttgattcttgttca 99  Q
    ||||||||||||| || | | |||||||||||||| ||||||||||| |||||||||||||||||||||||| | | ||||||| |  ||||||||||||    
T  177784 attacatgttcaaataggaacaaatgataagttgtgaaaattgtgctaaattggtgaattttgctaagttgtggttgaattgagttacgattcttgttca 177685  T
Q  100 attgatgttatg 111  Q
    ||||||||||||    
T  177684 attgatgttatg 177673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1560 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold1560
Description:

Target: scaffold1560; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 99 - 157
Target Start/End: Original strand, 57 - 115
Alignment:
Q  99 aattgatgttatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  57 aattgatgttatgattgatgaataattgcttgggtttgcatattcatggattgatgatg 115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 99 - 157
Target Start/End: Complemental strand, 48572 - 48514
Alignment:
Q  99 aattgatgttatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  48572 aattgatgttatgattgatgaataattgcttgggtttgcatattcatggattgatgatg 48514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 272201 - 272091
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggt-aattgaggtttgattcttgttca 99  Q
    ||||||||||||| || | | |||||||||||||| ||||||||||| |||||||||||||||||||||||| | |  |||||| | |||||||||||||    
T  272201 attacatgttcaaataggaacaaatgataagttgtgaaaattgtgctaaattggtgaattttgctaagttgtggttggattgagttatgattcttgttca 272102  T
Q  100 attgatgttat 110  Q
    |||| ||||||    
T  272101 attggtgttat 272091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 151
Target Start/End: Complemental strand, 272069 - 272031
Alignment:
Q  113 ttgatgaataattgcttgggtatgcatattcatggattg 151  Q
    ||||||||| |||||||||||||||||||||||| ||||    
T  272069 ttgatgaatcattgcttgggtatgcatattcatgaattg 272031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 13682 - 13609
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttg 74  Q
    ||||||||||||||||||||||||||  ||||||| ||||||||||||||||| |||||||||||| |||||||    
T  13682 attacatgttcaattatgtaaaaatgtgaagttgtgaaaattgtgctcaattgatgaattttgctatgttgttg 13609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 41824 - 41751
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttg 74  Q
    ||||||||||||||||||||||||||  ||||||| ||||||||| |||||||||||||||||||| |||||||    
T  41824 attacatgttcaattatgtaaaaatgtgaagttgtgaaaattgtgttcaattggtgaattttgctatgttgttg 41751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 157
Target Start/End: Complemental strand, 41692 - 41648
Alignment:
Q  113 ttgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||    
T  41692 ttgatgaatcattgcttgggtatgcatattcatgaattgatgatg 41648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 38 - 155
Target Start/End: Complemental strand, 3328 - 3210
Alignment:
Q  38 aaattgtgctcaattggtgaattttgctaagttgttggtaattgaggtt---tgattcttgttcaattgatgttatgattgatgaataattgcttgggta 134  Q
    ||||||| ||||| ||||||||||||||||||||||| | |  |||| |   ||||| |||||||||||||||| |||||||||||| |||| |||||||    
T  3328 aaattgtactcaaatggtgaattttgctaagttgttgttga--gaggatatgtgattattgttcaattgatgttgtgattgatgaatcattgtttgggta 3231  T
Q  135 tgcatattcatggattgatga 155  Q
     ||||||||||| ||||||||    
T  3230 ggcatattcatgaattgatga 3210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 5705 - 5592
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattt-tgctaagttgttggtaa-ttgaggtttgattcttgttc 98  Q
    |||||||||| || ||||||||||||||||||  | || |||||||||||||||||||||| | ||||||||||| ||| ||||| | |||| |||||||    
T  5705 attacatgtttaaatatgtaaaaatgataagtcatgaatattgtgctcaattggtgaatttctcctaagttgttgttaatttgagatgtgatgcttgttc 5606  T
Q  99 aattgatgttatga 112  Q
    || |||||||||||    
T  5605 aaatgatgttatga 5592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 50; Significance: 9e-20; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 212 - 99
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattt-tgctaagttgttggtaa-ttgaggtttgattcttgttc 98  Q
    |||||||||| || ||||||||||||||||||| |  | |||||||||||||||||||||| | ||||||||||| ||| ||||| | |||| |||||||    
T  212 attacatgtttaaatatgtaaaaatgataagttatgtatattgtgctcaattggtgaatttctcctaagttgttgttaatttgagatgtgatgcttgttc 113  T
Q  99 aattgatgttatga 112  Q
    || |||||||||||    
T  112 aaatgatgttatga 99  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 157
Target Start/End: Complemental strand, 91 - 35
Alignment:
Q  101 ttgatgttatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||| |||||||| |||||||||||||||||| |||||||||||| |||| |||||    
T  91 ttgatattatgattaatgaataattgcttgggtttgcatattcatgaattgttgatg 35  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 50; Significance: 9e-20; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 43174 - 43061
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattt-tgctaagttgttggtaa-ttgaggtttgattcttgttc 98  Q
    ||||||||||||| |||||||||||| |||||| | || |||||||| ||||||||||||| | ||||||||||| ||| ||||| | |||||| |||||    
T  43174 attacatgttcaaatatgtaaaaatgttaagttatgaagattgtgctaaattggtgaatttctcctaagttgttgttaatttgagatgtgattcgtgttc 43075  T
Q  99 aattgatgttatga 112  Q
    || |||||||||||    
T  43074 aagtgatgttatga 43061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 157
Target Start/End: Complemental strand, 43053 - 42997
Alignment:
Q  101 ttgatgttatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  43053 ttgatattatgattgatgaataattgcttgggtttgcatattcatggattgatgatg 42997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1542 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold1542
Description:

Target: scaffold1542; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 621 - 732
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggta-attgaggtttgattcttgttca 99  Q
    ||||||||||||| || | | ||||||| |||||| |||||||| |||||||||||||||||||||||||  || || ||| || | ||||||||||| |    
T  621 attacatgttcaaataggaacaaatgatgagttgtgaaaattgtactcaattggtgaattttgctaagttactgttagattaagttatgattcttgttta 720  T
Q  100 attgatgttatg 111  Q
    ||||||||||||    
T  721 attgatgttatg 732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1542; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 157
Target Start/End: Original strand, 739 - 797
Alignment:
Q  99 aattgatgttatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    |||||||||| || ||||||||| |||||||||||||||||||||| | ||||| ||||    
T  739 aattgatgttgtggttgatgaatcattgcttgggtatgcatattcaggaattgaggatg 797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 34547 - 34658
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttggt-aattgaggtttgattcttg-ttc 98  Q
    ||||||||||||||| |||||||||   ||||||| |||||||| |||||| |||||||||||||||||||||| | ||||||| | |||||| || ||     
T  34547 attacatgttcaattgtgtaaaaatatgaagttgtgaaaattgttctcaataggtgaattttgctaagttgttgttgaattgagatatgattcatgtttt 34646  T
Q  99 aattgatgttat 110  Q
    ||||||||||||    
T  34647 aattgatgttat 34658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 157
Target Start/End: Original strand, 34680 - 34724
Alignment:
Q  113 ttgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||||||| | | |||||||||||||||||||||||||||||||    
T  34680 ttgatgaatcactacttgggtatgcatattcatggattgatgatg 34724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 51269 - 51328
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaatt 60  Q
    ||||||||||||| || |||||||||||||||||| ||||||||||||||||||||||||    
T  51269 attacatgttcaaataggtaaaaatgataagttgtgaaaattgtgctcaattggtgaatt 51328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 99 - 157
Target Start/End: Complemental strand, 9440 - 9382
Alignment:
Q  99 aattgatgttatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    |||||||||| || ||||||||| |||||||||||||||||||||||| ||||||||||    
T  9440 aattgatgttgtggttgatgaatcattgcttgggtatgcatattcatgaattgatgatg 9382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 89541 - 89614
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattttgctaagttgttg 74  Q
    ||||||||||||| || | | |||| ||||||||| |||||||||||||||||||||||| ||||  |||||||    
T  89541 attacatgttcaaataggaacaaattataagttgtgaaaattgtgctcaattggtgaattatgctttgttgttg 89614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1711 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold1711
Description:

Target: scaffold1711; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 1379 - 1439
Alignment:
Q  1 attacatgttcaattatgtaaaaatgataagttgtaaaaattgtgctcaattggtgaattt 61  Q
    ||||||||||||  |||| |||||||||||||| | || ||||||||||||||||||||||    
T  1379 attacatgttcatatatgcaaaaatgataagttatgaatattgtgctcaattggtgaattt 1439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 157
Target Start/End: Original strand, 37284 - 37328
Alignment:
Q  113 ttgatgaataattgcttgggtatgcatattcatggattgatgatg 157  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||    
T  37284 ttgatgaatcattgcttgggtatacatattcatggattgatgatg 37328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 56224 - 56260
Alignment:
Q  38 aaattgtgctcaattggtgaattttgctaagttgttg 74  Q
    ||||||||||||| |||||||||||||||||||||||    
T  56224 aaattgtgctcaaatggtgaattttgctaagttgttg 56260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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