View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0294_low_5 (Length: 364)
Name: NF0294_low_5
Description: NF0294
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0294_low_5 |
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Alignment Details
Target: chr8 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 98 - 339
Target Start/End: Complemental strand, 2097284 - 2097042
Alignment:
| Q |
98 |
attctgaagattaatcatgtgggagtttcaaaggctctttatctgaaggagtttttgaggnnnnnnnacgagttttaggtctaagaaaaaccaaggtttg |
197 |
Q |
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| T |
2097284 |
attctgaagattaatcatgtgggagtttcaaaggctctttatctgaaggagtttttgagttttttttacgagtcttaggtctaagaaaaaccaaagtttg |
2097185 |
T |
|
| Q |
198 |
gtctggcttt-agtttggcacgttgttgtgtggaccatttggaatttctgcaatgaaatgatttaatttctccaggggtcttggtttggctgtatcattg |
296 |
Q |
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|||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2097184 |
gtctggcttttagtttggcacgttgttgtgtgaaccatttggaatttctgcaatgaaatgatttaatttctccaggggtcttggtttggctgtatcattg |
2097085 |
T |
|
| Q |
297 |
gttctctctgatgttgggggttctgtggggggtttctctgctg |
339 |
Q |
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| T |
2097084 |
gttctctctgatgttgggggttctgtggggggtttctctgctg |
2097042 |
T |
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