View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0295-INSERTION-12 (Length: 441)

Name: NF0295-INSERTION-12
Description: NF0295
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0295-INSERTION-12
NF0295-INSERTION-12
[»] chr8 (1 HSPs)
chr8 (8-441)||(33631192-33631625)


Alignment Details
Target: chr8 (Bit Score: 402; Significance: 0; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 402; E-Value: 0
Query Start/End: Original strand, 8 - 441
Target Start/End: Original strand, 33631192 - 33631625
Alignment:
Q  8 gcatgtcccaactgctgtagctaattttacctacgtcttctttgttacatacatggcaaaagatacctccccgagatcgcttaagagttagtagaactct 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  33631192 gcatgtcccaactgctgtagctaattttacctacgtcttctttgttacatacatggcaaaagatacctccccgagatcgcttaagagttagtggaactct 33631291  T
Q  108 ctacaatattatgttgttgttgcgacacttcttgcttagtattgttatcacttttctcttgatcccatgcactgtgttgctagtaactaaatgctcatcc 207  Q
    ||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33631292 ctaaagtattatgttgttgttgcgacacttcttgcttagtattgttatcgcttttctcttgatcccatgcactgtgttgctagtaactaaatgctcatcc 33631391  T
Q  208 tccttaccaagtaatttcttgatggggaaggcatgttcatcttgcgtagcctttggatgtttctcatgtgcaaaatgcacctcctcaaggtggtcctcat 307  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  33631392 tccttaccaagtaatttctagatggggaaggcatgttcatcttgcgtagcctttggatgtttctcatgtgcaaaatgcacctcctcaaggtggtcatcat 33631491  T
Q  308 gagttcaagagttgatgttatcctcctcatgtatcttatcattatcaacattgaaatttagcataaataacaatcgtattcaaagggagcttaataggtt 407  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  33631492 gagttcaagagttgatgttatcttcctcatgtatcttatcattatcaacattgaaatttagcataaataataatcgtattcaaagggagcttaataggtt 33631591  T
Q  408 acatgttcaagaagttatagataatgtcgtctac 441  Q
    ||||||||||||||||||||||||||||||||||    
T  33631592 acatgttcaagaagttatagataatgtcgtctac 33631625  T

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