View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0298-INSERTION-1 (Length: 621)

Name: NF0298-INSERTION-1
Description: NF0298
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0298-INSERTION-1
NF0298-INSERTION-1
[»] chr5 (67 HSPs)
chr5 (137-619)||(17849734-17850217)
chr5 (8-122)||(17850247-17850361)
chr5 (541-616)||(28574693-28574768)
chr5 (548-619)||(2796731-2796802)
chr5 (531-617)||(39804935-39805021)
chr5 (531-616)||(8943228-8943313)
chr5 (531-616)||(21250620-21250705)
chr5 (549-617)||(6641813-6641881)
chr5 (548-619)||(2802892-2802963)
chr5 (531-621)||(18008475-18008565)
chr5 (531-617)||(27495881-27495967)
chr5 (531-616)||(20429604-20429689)
chr5 (548-617)||(42092244-42092313)
chr5 (543-619)||(29440307-29440383)
chr5 (542-616)||(42092006-42092080)
chr5 (531-616)||(6642087-6642172)
chr5 (548-617)||(27319033-27319102)
chr5 (542-616)||(8942876-8942950)
chr5 (542-616)||(39805006-39805080)
chr5 (531-612)||(5361518-5361599)
chr5 (543-616)||(6642027-6642100)
chr5 (565-617)||(40807972-40808024)
chr5 (561-616)||(40807769-40807824)
chr5 (542-616)||(2796975-2797049)
chr5 (543-616)||(42092185-42092258)
chr5 (571-619)||(1737601-1737649)
chr5 (548-616)||(21250274-21250342)
chr5 (548-616)||(27318974-27319042)
chr5 (541-616)||(1069060-1069134)
chr5 (561-616)||(1737544-1737599)
chr5 (548-619)||(1737661-1737732)
chr5 (561-616)||(2802965-2803020)
chr5 (543-616)||(6641867-6641940)
chr5 (531-616)||(28571039-28571123)
chr5 (548-621)||(30004075-30004148)
chr5 (576-616)||(1069301-1069341)
chr5 (548-616)||(2803076-2803144)
chr5 (548-616)||(2803136-2803204)
chr5 (548-616)||(18008194-18008262)
chr5 (548-616)||(39805167-39805235)
chr5 (548-616)||(42375436-42375504)
chr5 (561-616)||(2796804-2796859)
chr5 (541-616)||(26006369-26006443)
chr5 (549-612)||(42375497-42375560)
chr5 (543-616)||(1069121-1069193)
chr5 (543-616)||(21250560-21250633)
chr5 (543-616)||(42375782-42375855)
chr5 (576-616)||(20429709-20429749)
chr5 (548-616)||(22101691-22101759)
chr5 (548-616)||(29440124-29440192)
chr5 (561-616)||(30004028-30004083)
chr5 (561-616)||(38085351-38085406)
chr5 (543-616)||(27495953-27496024)
chr5 (548-602)||(35171766-35171820)
chr5 (579-616)||(2796915-2796952)
chr5 (543-612)||(27496115-27496184)
chr5 (548-616)||(8943168-8943236)
chr5 (547-603)||(10223467-10223523)
chr5 (531-591)||(30103106-30103166)
chr5 (561-616)||(17849677-17849732)
chr5 (542-588)||(27496170-27496216)
chr5 (564-616)||(1069170-1069224)
chr5 (543-588)||(1069180-1069225)
chr5 (583-616)||(1737425-1737458)
chr5 (561-606)||(27318863-27318908)
chr5 (548-616)||(35171706-35171774)
chr5 (543-615)||(39853868-39853940)
[»] chr8 (102 HSPs)
chr8 (541-616)||(9117512-9117587)
chr8 (531-619)||(24469485-24469573)
chr8 (539-617)||(15891579-15891657)
chr8 (548-619)||(4157594-4157665)
chr8 (531-616)||(6121507-6121592)
chr8 (531-619)||(22780060-22780146)
chr8 (531-616)||(27702618-27702703)
chr8 (548-617)||(29218361-29218430)
chr8 (543-616)||(44728121-44728194)
chr8 (548-616)||(35435602-35435670)
chr8 (543-617)||(24043743-24043817)
chr8 (543-616)||(35435383-35435456)
chr8 (548-616)||(29276637-29276705)
chr8 (548-616)||(31827172-31827240)
chr8 (541-616)||(15315391-15315466)
chr8 (541-616)||(15495760-15495835)
chr8 (541-619)||(1043648-1043726)
chr8 (543-616)||(9779157-9779230)
chr8 (548-617)||(15891862-15891931)
chr8 (531-616)||(28463805-28463890)
chr8 (531-616)||(29457118-29457203)
chr8 (548-616)||(9117794-9117862)
chr8 (543-616)||(23403821-23403894)
chr8 (543-616)||(31826845-31826918)
chr8 (548-616)||(15315176-15315244)
chr8 (548-616)||(15495545-15495613)
chr8 (550-610)||(31618727-31618787)
chr8 (548-616)||(38507079-38507147)
chr8 (541-612)||(23404104-23404175)
chr8 (545-616)||(44318440-44318511)
chr8 (542-616)||(22444615-22444689)
chr8 (542-616)||(31618368-31618442)
chr8 (542-616)||(42691907-42691981)
chr8 (548-616)||(15300598-15300667)
chr8 (543-616)||(15300884-15300957)
chr8 (543-616)||(15315331-15315404)
chr8 (548-616)||(15480967-15481036)
chr8 (543-616)||(15481253-15481326)
chr8 (543-616)||(15495700-15495773)
chr8 (543-616)||(15891643-15891716)
chr8 (543-616)||(15891803-15891876)
chr8 (543-616)||(24043803-24043876)
chr8 (548-617)||(44318499-44318568)
chr8 (548-616)||(6954-7022)
chr8 (548-616)||(9117734-9117802)
chr8 (548-616)||(22444966-22445034)
chr8 (548-616)||(23275381-23275449)
chr8 (548-616)||(23275441-23275509)
chr8 (548-616)||(29276697-29276765)
chr8 (561-616)||(1043728-1043783)
chr8 (561-616)||(22444906-22444961)
chr8 (546-616)||(1691843-1691912)
chr8 (542-616)||(6121870-6121944)
chr8 (542-616)||(15315111-15315184)
chr8 (542-616)||(15495480-15495553)
chr8 (542-616)||(29276901-29276975)
chr8 (570-616)||(31827113-31827159)
chr8 (543-616)||(7169-7242)
chr8 (531-616)||(2250708-2250793)
chr8 (543-616)||(9117574-9117647)
chr8 (571-616)||(15300944-15300989)
chr8 (571-616)||(15481313-15481358)
chr8 (548-616)||(23403765-23403834)
chr8 (567-616)||(23404011-23404060)
chr8 (548-621)||(35435328-35435401)
chr8 (548-616)||(1692192-1692260)
chr8 (548-616)||(23403705-23403773)
chr8 (548-616)||(29457195-29457263)
chr8 (561-616)||(4157865-4157920)
chr8 (561-616)||(9779015-9779070)
chr8 (561-616)||(23404040-23404095)
chr8 (541-616)||(27702336-27702411)
chr8 (561-616)||(28463895-28463950)
chr8 (548-606)||(42620809-42620868)
chr8 (542-616)||(1043929-1044003)
chr8 (570-616)||(1691926-1691972)
chr8 (542-616)||(44728407-44728481)
chr8 (531-616)||(2257054-2257139)
chr8 (531-616)||(2257417-2257502)
chr8 (576-616)||(7229-7269)
chr8 (548-616)||(2251071-2251139)
chr8 (564-616)||(9778958-9779010)
chr8 (548-616)||(11482638-11482705)
chr8 (543-619)||(27702555-27702631)
chr8 (548-616)||(38507293-38507361)
chr8 (561-616)||(27702416-27702471)
chr8 (561-616)||(42692068-42692123)
chr8 (546-616)||(31618660-31618730)
chr8 (564-610)||(38507270-38507316)
chr8 (567-616)||(23403982-23404031)
chr8 (543-616)||(29218416-29218489)
chr8 (543-612)||(35435546-35435615)
chr8 (548-616)||(2250785-2250853)
chr8 (576-616)||(35236816-35236856)
chr8 (561-616)||(4157667-4157722)
chr8 (561-616)||(24469429-24469483)
chr8 (561-612)||(42620486-42620537)
chr8 (541-600)||(42692146-42692204)
chr8 (543-616)||(38507134-38507208)
chr8 (579-616)||(29276841-29276878)
chr8 (547-616)||(42620738-42620807)
chr8 (548-616)||(6121584-6121652)
[»] chr1 (71 HSPs)
chr1 (532-616)||(32712166-32712250)
chr1 (531-617)||(1695708-1695794)
chr1 (548-616)||(20492031-20492099)
chr1 (548-617)||(1102893-1102962)
chr1 (531-616)||(38823755-38823840)
chr1 (545-616)||(5739509-5739580)
chr1 (532-615)||(29987497-29987580)
chr1 (537-612)||(41810963-41811037)
chr1 (541-616)||(45721140-45721215)
chr1 (549-619)||(29386375-29386445)
chr1 (548-617)||(4974842-4974911)
chr1 (543-616)||(15615424-15615497)
chr1 (543-616)||(20491971-20492044)
chr1 (548-616)||(5739392-5739460)
chr1 (548-616)||(39834008-39834076)
chr1 (548-616)||(49113193-49113261)
chr1 (561-616)||(18088100-18088155)
chr1 (543-616)||(1695780-1695853)
chr1 (543-616)||(4974897-4974970)
chr1 (541-610)||(5277303-5277372)
chr1 (543-616)||(20491715-20491788)
chr1 (548-612)||(4965082-4965146)
chr1 (548-616)||(41810745-41810813)
chr1 (561-616)||(4764916-4764971)
chr1 (544-615)||(49588075-49588146)
chr1 (543-616)||(1102833-1102907)
chr1 (548-617)||(4764842-4764912)
chr1 (546-616)||(29386161-29386231)
chr1 (548-614)||(42371740-42371806)
chr1 (562-616)||(45721221-45721275)
chr1 (531-616)||(18030194-18030279)
chr1 (548-616)||(1102678-1102746)
chr1 (548-616)||(3339170-3339237)
chr1 (548-616)||(29987221-29987289)
chr1 (548-616)||(39834284-39834352)
chr1 (548-616)||(45721491-45721559)
chr1 (548-616)||(48074369-48074437)
chr1 (561-612)||(4964936-4964987)
chr1 (561-616)||(43142846-43142901)
chr1 (542-616)||(4765118-4765192)
chr1 (542-616)||(15615200-15615277)
chr1 (544-616)||(18087991-18088064)
chr1 (543-616)||(29386318-29386391)
chr1 (543-616)||(41810800-41810873)
chr1 (543-616)||(42371402-42371475)
chr1 (547-616)||(43142690-43142759)
chr1 (531-616)||(48074429-48074513)
chr1 (548-616)||(15615269-15615337)
chr1 (548-616)||(47824481-47824548)
chr1 (561-612)||(18088246-18088297)
chr1 (561-616)||(29987436-29987491)
chr1 (546-616)||(5277369-5277438)
chr1 (561-607)||(38823704-38823750)
chr1 (543-616)||(18030266-18030338)
chr1 (549-602)||(18030575-18030628)
chr1 (561-610)||(39834230-39834279)
chr1 (548-616)||(1102618-1102686)
chr1 (548-616)||(4765058-4765126)
chr1 (543-619)||(18088299-18088374)
chr1 (548-616)||(29987281-29987349)
chr1 (540-616)||(49588012-49588087)
chr1 (561-616)||(42371678-42371733)
chr1 (548-606)||(49588340-49588399)
chr1 (548-616)||(4964892-4964962)
chr1 (543-616)||(15057238-15057311)
chr1 (548-600)||(22572681-22572733)
chr1 (548-616)||(39834068-39834136)
chr1 (531-606)||(41542706-41542781)
chr1 (569-616)||(43142652-43142699)
chr1 (549-603)||(24025938-24025992)
chr1 (567-611)||(24025803-24025847)
[»] chr7 (85 HSPs)
chr7 (541-616)||(42430650-42430725)
chr7 (531-616)||(3173223-3173308)
chr7 (543-616)||(48840269-48840342)
chr7 (531-619)||(46855286-46855374)
chr7 (541-616)||(44449008-44449083)
chr7 (548-617)||(8919752-8919821)
chr7 (548-612)||(18942313-18942377)
chr7 (548-616)||(18942588-18942656)
chr7 (545-619)||(9907822-9907896)
chr7 (542-616)||(42758953-42759027)
chr7 (548-616)||(30648221-30648289)
chr7 (541-616)||(6723487-6723562)
chr7 (551-606)||(45909974-45910029)
chr7 (542-616)||(29036418-29036491)
chr7 (542-616)||(37042988-37043062)
chr7 (542-616)||(37043339-37043412)
chr7 (542-616)||(37393330-37393403)
chr7 (542-619)||(9907486-9907563)
chr7 (543-612)||(10470520-10470589)
chr7 (543-616)||(30648467-30648540)
chr7 (543-616)||(42759014-42759087)
chr7 (543-616)||(47332348-47332420)
chr7 (564-616)||(3173584-3173636)
chr7 (548-616)||(10096964-10097032)
chr7 (543-619)||(22563717-22563793)
chr7 (548-616)||(22563997-22564065)
chr7 (550-602)||(35127458-35127510)
chr7 (548-616)||(47193529-47193597)
chr7 (543-614)||(18942530-18942601)
chr7 (561-616)||(45203800-45203855)
chr7 (548-610)||(29036142-29036204)
chr7 (542-616)||(39304982-39305056)
chr7 (542-616)||(45443407-45443481)
chr7 (543-616)||(3173295-3173368)
chr7 (571-616)||(8919530-8919575)
chr7 (543-616)||(8919562-8919635)
chr7 (547-616)||(22642133-22642202)
chr7 (531-616)||(45203568-45203653)
chr7 (561-610)||(48840098-48840147)
chr7 (548-616)||(6723427-6723495)
chr7 (548-616)||(22563937-22564005)
chr7 (548-616)||(44941075-44941143)
chr7 (544-616)||(45324921-45324993)
chr7 (565-616)||(45203662-45203713)
chr7 (548-615)||(45443192-45443259)
chr7 (542-616)||(42759234-42759308)
chr7 (548-616)||(22641913-22641986)
chr7 (543-616)||(42430590-42430663)
chr7 (548-617)||(44941015-44941084)
chr7 (543-616)||(47193469-47193542)
chr7 (543-616)||(48840209-48840282)
chr7 (576-616)||(9907705-9907745)
chr7 (561-617)||(9907764-9907820)
chr7 (544-616)||(35127729-35127801)
chr7 (548-616)||(38995242-38995310)
chr7 (548-616)||(45324861-45324929)
chr7 (561-616)||(22563795-22563850)
chr7 (561-616)||(45443265-45443320)
chr7 (561-606)||(10470597-10470642)
chr7 (547-612)||(18808138-18808203)
chr7 (543-616)||(30648276-30648349)
chr7 (543-616)||(44449070-44449143)
chr7 (543-616)||(44941230-44941303)
chr7 (543-612)||(48840021-48840089)
chr7 (548-616)||(29036358-29036426)
chr7 (548-616)||(39305048-39305115)
chr7 (548-612)||(42759178-42759242)
chr7 (548-616)||(44941290-44941358)
chr7 (561-616)||(18942386-18942441)
chr7 (561-616)||(22642073-22642128)
chr7 (531-602)||(45324560-45324631)
chr7 (561-616)||(45909908-45909963)
chr7 (546-616)||(29036201-29036271)
chr7 (542-616)||(37393680-37393754)
chr7 (548-616)||(41718029-41718097)
chr7 (560-616)||(35127527-35127582)
chr7 (543-583)||(36987088-36987128)
chr7 (561-605)||(37043290-37043334)
chr7 (561-616)||(9907565-9907619)
chr7 (561-616)||(46855229-46855284)
chr7 (548-594)||(10097082-10097128)
chr7 (531-588)||(10470838-10470895)
chr7 (543-616)||(37393390-37393463)
chr7 (548-609)||(44449231-44449292)
chr7 (569-617)||(36986957-36987005)
[»] chr6 (24 HSPs)
chr6 (531-621)||(9049773-9049863)
chr6 (539-612)||(24012533-24012606)
chr6 (542-616)||(5985787-5985861)
chr6 (548-616)||(4799578-4799646)
chr6 (541-616)||(29134920-29134995)
chr6 (542-616)||(4799328-4799402)
chr6 (548-617)||(33041017-33041086)
chr6 (542-613)||(14942262-14942333)
chr6 (548-616)||(5985853-5985921)
chr6 (548-612)||(5986052-5986116)
chr6 (522-587)||(7858584-7858649)
chr6 (564-612)||(4799553-4799601)
chr6 (548-612)||(29134987-29135051)
chr6 (548-616)||(7675581-7675649)
chr6 (548-616)||(7858641-7858709)
chr6 (550-616)||(33033177-33033243)
chr6 (576-616)||(33040956-33040996)
chr6 (561-616)||(4799407-4799462)
chr6 (542-613)||(4997656-4997727)
chr6 (551-605)||(9049704-9049758)
chr6 (575-616)||(4997948-4997989)
chr6 (579-616)||(7858796-7858832)
chr6 (576-612)||(14942356-14942392)
chr6 (548-580)||(33033375-33033407)
[»] scaffold0016 (4 HSPs)
scaffold0016 (531-619)||(202280-202368)
scaffold0016 (543-616)||(202512-202585)
scaffold0016 (561-616)||(202370-202425)
scaffold0016 (579-616)||(202572-202609)
[»] chr2 (87 HSPs)
chr2 (531-619)||(45638349-45638437)
chr2 (541-616)||(30851072-30851147)
chr2 (541-617)||(1844522-1844598)
chr2 (542-616)||(45638071-45638145)
chr2 (543-616)||(5248186-5248259)
chr2 (531-616)||(15286097-15286182)
chr2 (531-616)||(15787014-15787099)
chr2 (548-616)||(4603768-4603836)
chr2 (548-616)||(5482889-5482957)
chr2 (548-616)||(33616031-33616099)
chr2 (548-616)||(34334547-34334615)
chr2 (541-616)||(43865363-43865438)
chr2 (541-616)||(44436429-44436504)
chr2 (543-616)||(5247987-5248060)
chr2 (531-616)||(7881954-7882039)
chr2 (542-619)||(28182414-28182491)
chr2 (537-617)||(5247921-5248001)
chr2 (548-616)||(42553718-42553786)
chr2 (548-619)||(30512968-30513039)
chr2 (561-616)||(33953496-33953551)
chr2 (531-617)||(11973920-11974006)
chr2 (542-616)||(35125353-35125427)
chr2 (531-616)||(36387262-36387347)
chr2 (527-619)||(1038868-1038960)
chr2 (564-616)||(5248066-5248118)
chr2 (544-616)||(28238793-28238864)
chr2 (548-616)||(29683594-29683662)
chr2 (548-616)||(30513182-30513250)
chr2 (541-612)||(7438466-7438537)
chr2 (541-616)||(15285804-15285879)
chr2 (549-616)||(28238450-28238517)
chr2 (548-614)||(5483166-5483232)
chr2 (542-616)||(33953165-33953239)
chr2 (547-616)||(5482948-5483017)
chr2 (543-616)||(28582394-28582467)
chr2 (543-616)||(28582454-28582527)
chr2 (548-612)||(4603464-4603528)
chr2 (564-616)||(7438323-7438375)
chr2 (548-616)||(40343779-40343847)
chr2 (561-616)||(11974123-11974178)
chr2 (549-616)||(35125602-35125669)
chr2 (561-616)||(45638292-45638347)
chr2 (542-616)||(1039164-1039238)
chr2 (562-616)||(28238734-28238788)
chr2 (542-616)||(29683916-29683989)
chr2 (571-617)||(43671474-43671520)
chr2 (543-613)||(45638132-45638202)
chr2 (543-616)||(4603708-4603781)
chr2 (564-616)||(5248037-5248089)
chr2 (561-613)||(30513041-30513093)
chr2 (548-616)||(30823660-30823728)
chr2 (564-616)||(35125404-35125456)
chr2 (548-616)||(35125542-35125610)
chr2 (548-616)||(43671260-43671328)
chr2 (561-616)||(1038962-1039017)
chr2 (561-616)||(44436619-44436674)
chr2 (543-613)||(33953439-33953509)
chr2 (543-616)||(28182358-28182430)
chr2 (548-616)||(30851291-30851360)
chr2 (543-616)||(34334602-34334675)
chr2 (543-612)||(43671419-43671488)
chr2 (564-616)||(4603509-4603561)
chr2 (576-616)||(7438306-7438346)
chr2 (548-616)||(7881634-7881702)
chr2 (561-621)||(33615966-33616026)
chr2 (576-612)||(34334826-34334862)
chr2 (548-616)||(43671200-43671268)
chr2 (561-616)||(5483104-5483159)
chr2 (561-616)||(33615829-33615884)
chr2 (561-616)||(40343720-40343774)
chr2 (542-612)||(11974187-11974257)
chr2 (565-611)||(30851237-30851283)
chr2 (548-614)||(40343662-40343728)
chr2 (570-616)||(42553659-42553705)
chr2 (543-616)||(1039104-1039177)
chr2 (543-612)||(4603548-4603617)
chr2 (579-616)||(28182234-28182271)
chr2 (543-612)||(33615751-33615820)
chr2 (564-616)||(9144175-9144227)
chr2 (561-616)||(36387435-36387491)
chr2 (542-617)||(28182137-28182211)
chr2 (548-603)||(30823348-30823403)
chr2 (579-616)||(15786956-15786993)
chr2 (579-616)||(34334762-34334799)
chr2 (579-616)||(40343602-40343639)
chr2 (543-588)||(44436678-44436723)
chr2 (564-616)||(44436481-44436532)
[»] scaffold0062 (1 HSPs)
scaffold0062 (548-619)||(11733-11804)
[»] chr4 (93 HSPs)
chr4 (543-617)||(14336916-14336990)
chr4 (548-612)||(21956040-21956104)
chr4 (545-616)||(55358554-55358625)
chr4 (531-613)||(25154819-25154901)
chr4 (542-616)||(34979491-34979565)
chr4 (548-617)||(7632839-7632908)
chr4 (543-616)||(15631663-15631736)
chr4 (543-616)||(26553971-26554044)
chr4 (548-616)||(13846613-13846681)
chr4 (548-616)||(40289715-40289783)
chr4 (548-614)||(53856763-53856829)
chr4 (531-616)||(18598554-18598639)
chr4 (543-616)||(20421133-20421206)
chr4 (543-616)||(41898350-41898423)
chr4 (548-616)||(21956386-21956454)
chr4 (539-616)||(25363577-25363656)
chr4 (548-619)||(46429996-46430067)
chr4 (542-616)||(14336857-14336931)
chr4 (543-617)||(32751120-32751194)
chr4 (546-619)||(3253474-3253547)
chr4 (531-616)||(5322501-5322586)
chr4 (531-616)||(29031628-29031713)
chr4 (531-616)||(29043748-29043833)
chr4 (547-616)||(41898194-41898263)
chr4 (548-616)||(41898410-41898478)
chr4 (531-616)||(32557347-32557430)
chr4 (531-605)||(41898119-41898193)
chr4 (543-617)||(53856481-53856555)
chr4 (543-616)||(14336637-14336710)
chr4 (543-616)||(14336697-14336770)
chr4 (543-616)||(15631335-15631408)
chr4 (543-616)||(32751368-32751441)
chr4 (543-616)||(40998180-40998252)
chr4 (544-612)||(32557128-32557196)
chr4 (548-616)||(35779002-35779070)
chr4 (548-616)||(40998125-40998193)
chr4 (548-612)||(41511304-41511368)
chr4 (548-612)||(50523137-50523201)
chr4 (565-616)||(21956118-21956169)
chr4 (561-616)||(53856701-53856756)
chr4 (542-616)||(29031276-29031350)
chr4 (542-616)||(29043395-29043469)
chr4 (543-621)||(34979552-34979630)
chr4 (531-596)||(9860961-9861026)
chr4 (543-616)||(15631603-15631676)
chr4 (543-616)||(18598494-18598567)
chr4 (548-616)||(13846768-13846836)
chr4 (548-616)||(13864100-13864168)
chr4 (552-612)||(18598212-18598272)
chr4 (548-616)||(20421078-20421146)
chr4 (564-612)||(20421183-20421231)
chr4 (576-616)||(25363517-25363557)
chr4 (548-616)||(35778942-35779010)
chr4 (576-616)||(53856574-53856614)
chr4 (561-616)||(6111882-6111937)
chr4 (545-616)||(7633056-7633126)
chr4 (561-612)||(23159125-23159176)
chr4 (561-616)||(27389817-27389872)
chr4 (561-616)||(40289624-40289679)
chr4 (546-616)||(13870628-13870698)
chr4 (548-602)||(32751322-32751376)
chr4 (543-616)||(6112024-6112097)
chr4 (531-619)||(6112081-6112170)
chr4 (544-617)||(13858875-13858948)
chr4 (544-617)||(13870381-13870453)
chr4 (543-616)||(14966098-14966171)
chr4 (531-616)||(50523060-50523145)
chr4 (548-616)||(14966386-14966454)
chr4 (548-616)||(14966446-14966514)
chr4 (548-616)||(40998447-40998515)
chr4 (548-616)||(46429793-46429861)
chr4 (564-616)||(52851146-52851197)
chr4 (561-616)||(25154757-25154811)
chr4 (543-606)||(26553921-26553984)
chr4 (561-616)||(27389941-27389996)
chr4 (561-616)||(34508878-34508933)
chr4 (546-616)||(46429731-46429801)
chr4 (561-610)||(5322591-5322640)
chr4 (543-616)||(13858934-13859006)
chr4 (543-616)||(13870439-13870511)
chr4 (542-616)||(25154565-25154641)
chr4 (543-616)||(25154597-25154670)
chr4 (579-616)||(29031568-29031605)
chr4 (579-616)||(29043688-29043725)
chr4 (565-617)||(27390000-27390052)
chr4 (561-616)||(32557286-32557342)
chr4 (548-616)||(52850891-52850959)
chr4 (564-610)||(13870605-13870651)
chr4 (542-588)||(40289362-40289408)
chr4 (542-616)||(23159042-23159120)
chr4 (543-616)||(32751180-32751252)
chr4 (571-616)||(52851175-52851219)
chr4 (564-616)||(55358505-55358557)
[»] chr3 (77 HSPs)
chr3 (531-616)||(25147122-25147207)
chr3 (548-617)||(26997487-26997556)
chr3 (539-612)||(48382261-48382334)
chr3 (531-619)||(13657895-13657983)
chr3 (531-619)||(50293849-50293937)
chr3 (541-619)||(29777254-29777332)
chr3 (531-617)||(11871655-11871741)
chr3 (542-616)||(13712324-13712398)
chr3 (542-616)||(17579756-17579830)
chr3 (550-616)||(48517931-48517997)
chr3 (531-616)||(10820221-10820306)
chr3 (548-617)||(43122881-43122950)
chr3 (531-615)||(13712032-13712116)
chr3 (548-615)||(47220506-47220573)
chr3 (542-616)||(11871406-11871480)
chr3 (549-615)||(37148194-37148260)
chr3 (542-616)||(43122602-43122676)
chr3 (543-616)||(7515411-7515484)
chr3 (548-616)||(11218381-11218449)
chr3 (548-616)||(52211953-52212021)
chr3 (541-616)||(7515662-7515737)
chr3 (561-616)||(31324206-31324261)
chr3 (542-616)||(1771983-1772056)
chr3 (542-616)||(13658188-13658262)
chr3 (543-612)||(11218294-11218363)
chr3 (547-616)||(17580025-17580094)
chr3 (543-616)||(26997209-26997282)
chr3 (542-606)||(11218073-11218137)
chr3 (548-616)||(13712264-13712332)
chr3 (548-616)||(33623375-33623443)
chr3 (561-616)||(7515489-7515544)
chr3 (565-616)||(24097998-24098049)
chr3 (561-616)||(29777334-29777389)
chr3 (561-616)||(33623173-33623228)
chr3 (561-616)||(43122822-43122877)
chr3 (541-616)||(52212013-52212088)
chr3 (548-617)||(33623099-33623169)
chr3 (543-616)||(10820453-10820526)
chr3 (543-616)||(11871467-11871540)
chr3 (561-610)||(13657985-13658034)
chr3 (543-616)||(26997428-26997501)
chr3 (543-616)||(29777476-29777549)
chr3 (542-598)||(3750609-3750665)
chr3 (568-616)||(3750901-3750949)
chr3 (548-616)||(10820298-10820366)
chr3 (576-616)||(24098136-24098176)
chr3 (549-616)||(8112829-8112896)
chr3 (561-616)||(13712122-13712177)
chr3 (576-619)||(24097949-24097992)
chr3 (561-616)||(25147432-25147487)
chr3 (561-616)||(47220445-47220500)
chr3 (545-616)||(48381909-48381979)
chr3 (577-616)||(50293792-50293831)
chr3 (546-612)||(48518278-48518344)
chr3 (547-616)||(8112543-8112612)
chr3 (576-616)||(3750930-3750970)
chr3 (548-616)||(24098196-24098264)
chr3 (542-602)||(24098272-24098332)
chr3 (548-616)||(33623315-33623383)
chr3 (548-616)||(43122668-43122736)
chr3 (561-616)||(11218148-11218203)
chr3 (543-610)||(11871602-11871669)
chr3 (561-616)||(29231068-29231123)
chr3 (548-615)||(37148613-37148679)
chr3 (561-616)||(47220317-47220372)
chr3 (574-616)||(31324159-31324201)
chr3 (548-616)||(11218319-11218389)
chr3 (543-616)||(13658128-13658201)
chr3 (543-616)||(48517984-48518056)
chr3 (579-616)||(54924102-54924139)
chr3 (539-587)||(10820513-10820561)
chr3 (545-605)||(29231137-29231195)
chr3 (548-606)||(26997274-26997332)
chr3 (531-616)||(17580085-17580170)
chr3 (543-587)||(31324478-31324522)
chr3 (561-613)||(49122819-49122870)
chr3 (548-616)||(54924042-54924110)
[»] scaffold0182 (3 HSPs)
scaffold0182 (542-619)||(22208-22285)
scaffold0182 (531-619)||(23417-23505)
scaffold0182 (542-616)||(22460-22534)
[»] scaffold0051 (4 HSPs)
scaffold0051 (531-619)||(60738-60826)
scaffold0051 (542-616)||(60485-60559)
scaffold0051 (543-616)||(60546-60619)
scaffold0051 (561-616)||(60681-60736)
[»] scaffold0121 (4 HSPs)
scaffold0121 (542-616)||(23946-24020)
scaffold0121 (548-612)||(23671-23735)
scaffold0121 (552-616)||(23886-23950)
scaffold0121 (561-616)||(23744-23799)
[»] scaffold0220 (3 HSPs)
scaffold0220 (543-616)||(21827-21900)
scaffold0220 (531-616)||(22067-22152)
scaffold0220 (543-612)||(22011-22080)
[»] scaffold0179 (2 HSPs)
scaffold0179 (548-616)||(32255-32323)
scaffold0179 (553-617)||(32439-32502)


Alignment Details
Target: chr5 (Bit Score: 399; Significance: 0; HSPs: 67)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 399; E-Value: 0
Query Start/End: Original strand, 137 - 619
Target Start/End: Complemental strand, 17850217 - 17849734
Alignment:
Q  137 atgggacaaagcttttcacactagccacaaccctatcttatctagtgttattaatttgtacttgactagttcaaccaaattgtcccatcatacaagatta 236  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  17850217 atgggacaaagcttatcacactagccacacccctatcttatctagtgttattaatttgtacttgactagttcaaccaaattgtcccttcatacaagatta 17850118  T
Q  237 aacctacagaaatgtaatggtcttttttaggtgagacatataatagattcttaaacaaattaagaaactaaattcaagtaaataatttagtgaaatttat 336  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  17850117 aacctacagaaatgtaatagtcttttttaggtgagacatataatagattcttcaacaaattaagaaactaaattcaagtaaataatttagtgaaatttat 17850018  T
Q  337 accaaattcatccatgagactgagttacaagagataataaaattcgtactaccaaaagttctcccata-tatataacgtgtttaaaaagtgagctaaaat 435  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||    
T  17850017 accaaattcatccatgagactgagttacaagagataataaaattcgtactaccaattgttctcccatattatataacgtgtttaaaaagtgagctaaaat 17849918  T
Q  436 tcattatctttggagatgatatatgnnnnnnnagagaattgcaaacctgtctatttaggacacaaatcaaactaattattataatatttttgtcgaatac 535  Q
    |||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |||||    
T  17849917 tcattatctttggagatgatatatgcttttttagagaattgcaaacctgtctatttaggacacaaatcaaactaattattataatattttggccaaatac 17849818  T
Q  536 atcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttgga 619  Q
    ||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  17849817 atcctcgggtcctttaagtttcatatttatttcagatagatcgtttaagtttctaaagtttcagataggtcctttaagtttgga 17849734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 8 - 122
Target Start/End: Complemental strand, 17850361 - 17850247
Alignment:
Q  8 acgacaacttttgattttttaaaagatctatcattgtatgtagttgttatgaaagggtggcaaaggccagtacttgcccccgacaaaatctgtcctagtg 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  17850361 acgacaacttttgattttttaaaagatctatcattgtatgtagttgttaagaaagggtggcaaaggccggtacctgcccccgacaaaatctgtcctagtg 17850262  T
Q  108 ggataatcctagttt 122  Q
    |||||||||||||||    
T  17850261 ggataatcctagttt 17850247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 541 - 616
Target Start/End: Complemental strand, 28574768 - 28574693
Alignment:
Q  541 cgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  28574768 cgggtcctttaagtttcatatttgtttcagatagatcttttaagtttctaaggtttcagataggtcctttaagttt 28574693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 548 - 619
Target Start/End: Original strand, 2796731 - 2796802
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttgga 619  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  2796731 tttaagtttcatgtttgtttcagatagatcctttaagtttctaaggttttagataggtcctttaagtttgga 2796802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 531 - 617
Target Start/End: Original strand, 39804935 - 39805021
Alignment:
Q  531 aatacatcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttg 617  Q
    ||||| ||||| | || |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  39804935 aatacctcctcagatcctttaagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcagatgggtcctttaagtttg 39805021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 531 - 616
Target Start/End: Complemental strand, 8943313 - 8943228
Alignment:
Q  531 aatacatcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| ||| |||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  8943313 aatacctccccgggtccttttagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcagataggttctttaagttt 8943228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 531 - 616
Target Start/End: Complemental strand, 21250705 - 21250620
Alignment:
Q  531 aatacatcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||| | |||||| |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  21250705 aatacattcccgggtcctttaagtttcatgtttgtttcagatagatcctttaagtttctaaggttttagataggtcatttaagttt 21250620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 549 - 617
Target Start/End: Original strand, 6641813 - 6641881
Alignment:
Q  549 ttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttg 617  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  6641813 ttaagtttcatgtttgtttcagatagatcctttaagtttctaagatttcagataggtcctttaagtttg 6641881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 548 - 619
Target Start/End: Original strand, 2802892 - 2802963
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttgga 619  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  2802892 tttaagtttcatgtttgtttcagatagatcttttaagtttctaaggttttagataggtcctttaagtttgga 2802963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 531 - 621
Target Start/End: Complemental strand, 18008565 - 18008475
Alignment:
Q  531 aatacatcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttggaat 621  Q
    ||||| ||| || ||| |||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||    
T  18008565 aatacctccccgagtcctttaagtttcatgtttgtttcagatagatcctttaagtttttaaggtttcagatcggtcctttaagtttcgaat 18008475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 531 - 617
Target Start/End: Original strand, 27495881 - 27495967
Alignment:
Q  531 aatacatcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttg 617  Q
    ||||| ||| |||||| |||||||||||  |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  27495881 aatacctccccgggtcctttaagtttcacgtttgtttcagataggtcctttaagtttctaaggtttcaaataggtcctttaagtttg 27495967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 531 - 616
Target Start/End: Original strand, 20429604 - 20429689
Alignment:
Q  531 aatacatcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| ||| ||| ||||||||||||||| ||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||    
T  20429604 aatacctccccggatcttttaagtttcatgtttgtttaaaatagatcctttaagtttctaaggttgcagataggtcctttaagttt 20429689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 548 - 617
Target Start/End: Complemental strand, 42092313 - 42092244
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttg 617  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  42092313 tttaagtttcatgtttgttttagatagatcctttaagtttctaaggtttcagataggtcttttaagtttg 42092244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 543 - 619
Target Start/End: Complemental strand, 29440383 - 29440307
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttgga 619  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||  ||||||||||||    
T  29440383 ggtcttttaagtttcatatttgttttagatagatcctttaagtttttaaggtttcagatatgttttttaagtttgga 29440307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 542 - 616
Target Start/End: Original strand, 42092006 - 42092080
Alignment:
Q  542 gggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| |||||||||||  |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  42092006 gggtcctttaagtttcacgtttgtttcagataggtcctttaagtttctaagatttcagataggtcctttaagttt 42092080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 531 - 616
Target Start/End: Complemental strand, 6642172 - 6642087
Alignment:
Q  531 aatacatcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| |||| ||||| |||||||| ||  ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  6642172 aatacctccttgggtcctttaagttccacgtttgttttagataggtcctttaagtttctaaggtttcagataggtcctttaagttt 6642087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 548 - 617
Target Start/End: Complemental strand, 27319102 - 27319033
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttg 617  Q
    ||||||||| || ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  27319102 tttaagttttatgtttgtttcagatagatcctttaaatttctaaggtttcagataagtcctttaagtttg 27319033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 542 - 616
Target Start/End: Original strand, 8942876 - 8942950
Alignment:
Q  542 gggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| |||||||||||| ||||||||| |||| ||||||||||||||||||||||| ||||||| |||||||||    
T  8942876 gggtcctttaagtttcatgtttgtttcatataggtcctttaagtttctaaggtttcatataggtcttttaagttt 8942950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 542 - 616
Target Start/End: Original strand, 39805006 - 39805080
Alignment:
Q  542 gggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| ||||||||| |  |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  39805006 gggtcctttaagtttgaagtttgtttcggataggtcctttaagtttctaaggtttcagataggtcctttaagttt 39805080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 531 - 612
Target Start/End: Complemental strand, 5361599 - 5361518
Alignment:
Q  531 aatacatcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaa 612  Q
    ||||| ||| |||||| |||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||| | ||||||    
T  5361599 aatacctccccgggtcctttaagttgcatgtttgtttcagatagatcatttaagtttctaaggtttcagatagattctttaa 5361518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 543 - 616
Target Start/End: Complemental strand, 6642100 - 6642027
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| ||||||||||   |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  6642100 ggtcctttaagtttcgagtttgtttcggataggtcctttaagtttctaaggtttcagataggtcctttaagttt 6642027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 565 - 617
Target Start/End: Complemental strand, 40808024 - 40807972
Alignment:
Q  565 tttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttg 617  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  40808024 tttcagatagatcctttaactttctaaggtttcagataggtcctttaagtttg 40807972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 561 - 616
Target Start/End: Original strand, 40807769 - 40807824
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  40807769 tttgtttcagataaatcctttaagtttctaaggtttcagataagtcctttaagttt 40807824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 542 - 616
Target Start/End: Complemental strand, 2797049 - 2796975
Alignment:
Q  542 gggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| |||||||||||  |||||||||||||| ||||||||||||||||||||||| ||| || ||||||||||    
T  2797049 gggtcctttaagtttcacgtttgtttcagataggtcctttaagtttctaaggtttcatataagtgctttaagttt 2796975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 543 - 616
Target Start/End: Complemental strand, 42092258 - 42092185
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||||| |  |||||||| ||||| || |||||||||||||||||| |||||||||||||||||||    
T  42092258 ggtcttttaagtttgaagtttgtttcggataggtcttttaagtttctaaggttttagataggtcctttaagttt 42092185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 571 - 619
Target Start/End: Complemental strand, 1737649 - 1737601
Alignment:
Q  571 atagatcctttaagtttctaaggtttcagataggtcctttaagtttgga 619  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  1737649 atagatcctttaagtttataaggtttcagataggtcctttaagtttgga 1737601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 548 - 616
Target Start/End: Original strand, 21250274 - 21250342
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||  |||||||||||||| ||||| |||||||||||||||||||||| ||||||| ||||    
T  21250274 tttaagtttcaggtttgtttcagataggtccttaaagtttctaaggtttcagatagatcctttatgttt 21250342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 548 - 616
Target Start/End: Complemental strand, 27319042 - 27318974
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||| |  |||||||| ||||| || ||||||||||||||||||||||||||||||||||||||    
T  27319042 tttaagtttgaagtttgtttcggataggtcttttaagtttctaaggtttcagataggtcctttaagttt 27318974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 541 - 616
Target Start/End: Original strand, 1069060 - 1069134
Alignment:
Q  541 cgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||| ||| || ||||| ||||||||||||||||||||||||||||||| ||| |||| |||||||||    
T  1069060 cgggtcttttaaattttatgtttgtctcagatagatcctttaagtttctaaggtttcggat-ggtcatttaagttt 1069134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 561 - 616
Target Start/End: Complemental strand, 1737599 - 1737544
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||    
T  1737599 tttgtttctgataggtcctttaagtttctaaggtttcagataggtgctttaagttt 1737544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 548 - 619
Target Start/End: Complemental strand, 1737732 - 1737661
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttgga 619  Q
    |||||||||||| ||||| | ||||||||| ||| ||||| |||||||||||||| ||||||||||||||||    
T  1737732 tttaagtttcatgtttgtcttagatagatcatttcagtttttaaggtttcagataagtcctttaagtttgga 1737661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 561 - 616
Target Start/End: Original strand, 2802965 - 2803020
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||    
T  2802965 tttgtttcggataggtcctttaagtttttaaggtttcagataggtcctttaagttt 2803020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 543 - 616
Target Start/End: Original strand, 6641867 - 6641940
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| ||||||||| |  |||||||| |||||| |||||||||||||||| ||||| |||||||||||||||||    
T  6641867 ggtcctttaagtttgaagtttgtttcggatagaccctttaagtttctaagatttcacataggtcctttaagttt 6641940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 531 - 616
Target Start/End: Original strand, 28571039 - 28571123
Alignment:
Q  531 aatacatcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| ||| ||| || |||||||||||  |||||||||||||| ||||||||||||||||| ||||| |||||| ||||||||||    
T  28571039 aatacctccccggatcctttaagtttcacgtttgtttcagataggtcctttaagtttctaagctttcatataggt-ctttaagttt 28571123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 548 - 621
Target Start/End: Original strand, 30004075 - 30004148
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttggaat 621  Q
    ||||||||||   |||||||||||||  || |||||||||||||||||||||||||||||||||| ||| ||||    
T  30004075 tttaagtttcgagtttgtttcagatatgtcttttaagtttctaaggtttcagataggtcctttaaatttcgaat 30004148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 576 - 616
Target Start/End: Complemental strand, 1069341 - 1069301
Alignment:
Q  576 tcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  1069341 tcctttaagtttctaaggtttcagataggtcctttaagttt 1069301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 548 - 616
Target Start/End: Complemental strand, 2803144 - 2803076
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||   |||||||| ||||  |||||||||||| ||||||||||||||||||||||||||||    
T  2803144 tttaagtttcgagtttgtttcggatatgtcctttaagtttataaggtttcagataggtcctttaagttt 2803076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 548 - 616
Target Start/End: Complemental strand, 2803204 - 2803136
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||  |||||||||||||  ||||||||||||||||||||||| ||| || ||||||||||    
T  2803204 tttaagtttcacgtttgtttcagatatgtcctttaagtttctaaggtttcatataagtgctttaagttt 2803136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 548 - 616
Target Start/End: Original strand, 18008194 - 18008262
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||  |||||||||||||| |||||||| ||||||| ||||||||  ||||||||||||||    
T  18008194 tttaagtttcacgtttgtttcagataggtcctttaaatttctaaagtttcagactggtcctttaagttt 18008262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 548 - 616
Target Start/End: Complemental strand, 39805235 - 39805167
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||   |||||||| ||||| ||||||||||||||||||||| ||||||||| |||||||||    
T  39805235 tttaagtttcgagtttgtttcggataggtcctttaagtttctaaggttttagataggtcatttaagttt 39805167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 548 - 616
Target Start/End: Original strand, 42375436 - 42375504
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||| ||||||| ||||| ||||||||| ||| ||||||||||||||| ||| ||||||||    
T  42375436 tttaagtttcatgtttgtttaagatatatcctttaaatttttaaggtttcagatagatcccttaagttt 42375504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 561 - 616
Target Start/End: Original strand, 2796804 - 2796859
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||| ||||  |||||||||||| ||||||||||||||||||||||||||||    
T  2796804 tttgtttcggatatgtcctttaagtttttaaggtttcagataggtcctttaagttt 2796859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 541 - 616
Target Start/End: Complemental strand, 26006443 - 26006369
Alignment:
Q  541 cgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||| |||||||||||| ||||||||||||||||  |||||||||||||||||| ||||||  |||| ||||||    
T  26006443 cgggtcctttaagtttcatgtttgtttcagatagat-ttttaagtttctaaggttttagatagacccttgaagttt 26006369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 549 - 612
Target Start/End: Original strand, 42375497 - 42375560
Alignment:
Q  549 ttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaa 612  Q
    ||||||||| | ||||||||  |||| |||||||||||||||||| ||||||||||||||||||    
T  42375497 ttaagtttcgtgtttgtttcgcataggtcctttaagtttctaaggcttcagataggtcctttaa 42375560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 543 - 616
Target Start/End: Original strand, 1069121 - 1069193
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| ||||||||||   |||||||| ||||| || ||||||||| ||||||||||||||||||||||||||||    
T  1069121 ggtcatttaagtttcgagtttgtttcggataggtc-tttaagtttataaggtttcagataggtcctttaagttt 1069193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 543 - 616
Target Start/End: Complemental strand, 21250633 - 21250560
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| ||||||||||   ||||||||  |||| || |||||||||||||| |||||||||||||||||||||||    
T  21250633 ggtcatttaagtttcgagtttgtttcgaataggtcttttaagtttctaagatttcagataggtcctttaagttt 21250560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 543 - 616
Target Start/End: Complemental strand, 42375855 - 42375782
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| |||||||||||  ||||||| |||||| | ||||||| || |||||||| |||||||||||||||||||    
T  42375855 ggtcctttaagtttcacgtttgttttagataggttctttaagcttttaaggttttagataggtcctttaagttt 42375782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 576 - 616
Target Start/End: Original strand, 20429709 - 20429749
Alignment:
Q  576 tcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  20429709 tcctttaagtttctaaggtttcagataggtcttttaagttt 20429749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 548 - 616
Target Start/End: Original strand, 22101691 - 22101759
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||| |||||| ||| |||||| |||||||| ||| ||| ||||||||||| ||||||||||||    
T  22101691 tttaagttttatatttattttagataggtcctttaaatttttaacgtttcagatagatcctttaagttt 22101759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 548 - 616
Target Start/End: Original strand, 29440124 - 29440192
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||| ||||||| |||||  ||||||||||||  || |||||||||| |||||||||||||    
T  29440124 tttaagtttcatgtttgttttagatatgtcctttaagttttcaaagtttcagataagtcctttaagttt 29440192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 561 - 616
Target Start/End: Original strand, 30004028 - 30004083
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||||| |||||||||||| |||||||| ||||| ||| |||||||||    
T  30004028 tttgtttcagataggtcctttaagtttttaaggttttagatatgtcatttaagttt 30004083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 561 - 616
Target Start/End: Complemental strand, 38085406 - 38085351
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||| || || |||||||| ||||||||||||||||||||||| ||||||||    
T  38085406 tttgtttcggagaggtcctttaaatttctaaggtttcagataggtccgttaagttt 38085351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 543 - 616
Target Start/End: Original strand, 27495953 - 27496024
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| ||||||||| | |||||||||  |||||||||||||||||| ||||||||  | |||||||||||||||    
T  27495953 ggtcctttaagtttgaaatttgtttcgaatagatcctttaagtttcaaaggtttc--aaaggtcctttaagttt 27496024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 548 - 602
Target Start/End: Original strand, 35171766 - 35171820
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagata 602  Q
    |||||||||| |||||||||  |||||||||||||| ||| ||||||||||||||    
T  35171766 tttaagtttcgtatttgttttggatagatcctttaaatttttaaggtttcagata 35171820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 579 - 616
Target Start/End: Complemental strand, 2796952 - 2796915
Alignment:
Q  579 tttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  2796952 tttaagtttataaggtttcagataggtcctttaagttt 2796915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 543 - 612
Target Start/End: Complemental strand, 27496184 - 27496115
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaa 612  Q
    |||| ||||||||||   |||||||| ||||  ||||||||||||||||||||| |||||||| ||||||    
T  27496184 ggtcctttaagtttcgagtttgtttcggatatgtcctttaagtttctaaggtttgagataggttctttaa 27496115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 548 - 616
Target Start/End: Complemental strand, 8943236 - 8943168
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||   |||||| || |||| || ||||||||| |||||||||||||| |||||||||||||    
T  8943236 tttaagtttcgagtttgttccaaataggtcatttaagtttataaggtttcagataagtcctttaagttt 8943168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 547 - 603
Target Start/End: Original strand, 10223467 - 10223523
Alignment:
Q  547 ttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagatag 603  Q
    ||||||||||||| ||||||| |||||||| |||||| |||| || |||||||||||    
T  10223467 ttttaagtttcatgtttgttttagatagatgctttaattttcgaaagtttcagatag 10223523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 531 - 591
Target Start/End: Original strand, 30103106 - 30103166
Alignment:
Q  531 aatacatcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaa 591  Q
    |||| |||| ||| || ||||| |||||| ||||||||||| |||||||||||||||||||    
T  30103106 aatatatccccggatcctttaaatttcatgtttgtttcagacagatcctttaagtttctaa 30103166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 561 - 616
Target Start/End: Complemental strand, 17849732 - 17849677
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||  |||| ||||||||||||||||||| ||| |||| ||||||||||||    
T  17849732 tttgtttcgaataggtcctttaagtttctaaggtctcaaatagatcctttaagttt 17849677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 542 - 588
Target Start/End: Complemental strand, 27496216 - 27496170
Alignment:
Q  542 gggtcttttaagtttcatatttgtttcagatagatcctttaagtttc 588  Q
    ||||| |||||||||||  |||||||||||||| |||||||||||||    
T  27496216 gggtcctttaagtttcacgtttgtttcagataggtcctttaagtttc 27496170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 564 - 616
Target Start/End: Original strand, 1069170 - 1069224
Alignment:
Q  564 gtttcagatagatcctttaagtttctaag---gtttcagataggtcctttaagttt 616  Q
    ||||||||||| ||||||||||||| |||   ||||||||||||||||||||||||    
T  1069170 gtttcagataggtcctttaagtttc-aagtttgtttcagataggtcctttaagttt 1069224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 543 - 588
Target Start/End: Original strand, 1069180 - 1069225
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttc 588  Q
    |||| |||||||||||  |||||||||||||| |||||||||||||    
T  1069180 ggtcctttaagtttcaagtttgtttcagataggtcctttaagtttc 1069225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 583 - 616
Target Start/End: Original strand, 1737425 - 1737458
Alignment:
Q  583 agtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||||| ||||||||||||||||||||    
T  1737425 agtttctaaggttacagataggtcctttaagttt 1737458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 561 - 606
Target Start/End: Original strand, 27318863 - 27318908
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtc 606  Q
    ||||||||| |||  |||||||||||| ||||||||||||||||||    
T  27318863 tttgtttcaaatatgtcctttaagtttataaggtttcagataggtc 27318908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 616
Target Start/End: Original strand, 35171706 - 35171774
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| |||||  |||||||||||||  |||||||| |||||||| ||||| |||  ||||||||||||    
T  35171706 tttaaatttcacgtttgtttcagatatgtcctttaaatttctaagatttcaaataaatcctttaagttt 35171774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 543 - 615
Target Start/End: Complemental strand, 39853940 - 39853868
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtt 615  Q
    |||| ||||||||| |  ||||| ||||||| || |||||||||| ||| ||||||||| | |||||||||||    
T  39853940 ggtcctttaagttttaagtttgtatcagataaattctttaagtttttaaagtttcagattgatcctttaagtt 39853868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 2e-32; HSPs: 102)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 541 - 616
Target Start/End: Original strand, 9117512 - 9117587
Alignment:
Q  541 cgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9117512 cgggtcttttaagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 9117587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 531 - 619
Target Start/End: Complemental strand, 24469573 - 24469485
Alignment:
Q  531 aatacatcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttgga 619  Q
    ||||| ||| |||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24469573 aatacctccccgggtcctttaaatttcatgtttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttgga 24469485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 539 - 617
Target Start/End: Original strand, 15891579 - 15891657
Alignment:
Q  539 ctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttg 617  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  15891579 ctcgggtcctttaagtttcatatttgtttcagatagatccttaaagtttctaaggtttcagacaggtcctttaagtttg 15891657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 548 - 619
Target Start/End: Original strand, 4157594 - 4157665
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttgga 619  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4157594 tttaagtttcatgtttatttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttgga 4157665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 531 - 616
Target Start/End: Original strand, 6121507 - 6121592
Alignment:
Q  531 aatacatcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| ||| |||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  6121507 aatacctccccgggtcctttaagtttcatgtttgttttagatagatcctttaagtttctaaggtttcagataggttctttaagttt 6121592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 531 - 619
Target Start/End: Original strand, 22780060 - 22780146
Alignment:
Q  531 aatacatcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttgga 619  Q
    ||||| ||| |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  22780060 aatacctccccgggtcatttaagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcagataggtc--ttaagtttgga 22780146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 531 - 616
Target Start/End: Complemental strand, 27702703 - 27702618
Alignment:
Q  531 aatacatcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| ||| || ||| |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  27702703 aatacctccacgagtcctttaagtttcatgtttgtttcagatagctcctttaagtttctaaggtttcagataggtcctttaagttt 27702618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 548 - 617
Target Start/End: Original strand, 29218361 - 29218430
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttg 617  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  29218361 tttaagtttcatgtttgtttcagatagatcctttaagtttttaaggtttcagataggtcctttaagtttg 29218430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 543 - 616
Target Start/End: Original strand, 44728121 - 44728194
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  44728121 ggtcctttaagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcagacaggtcctttaagttt 44728194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 548 - 616
Target Start/End: Complemental strand, 35435670 - 35435602
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  35435670 tttaagtttcatgtttgtttcagatagatcctttaagtttctaaggttttagataggtcctttaagttt 35435602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 543 - 617
Target Start/End: Original strand, 24043743 - 24043817
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttg 617  Q
    |||| |||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  24043743 ggtcctttaagtttcatgtttgtttcagatagatcctttaagtttttaaggttttagataggtcctttaagtttg 24043817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 543 - 616
Target Start/End: Original strand, 35435383 - 35435456
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| ||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  35435383 ggtcctttaagtttcgaatttgtttcagatagatcttttaagtttctaaggtttcagataggtcctttaagttt 35435456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 548 - 616
Target Start/End: Original strand, 29276637 - 29276705
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  29276637 tttaagtttcatgtttgtttcagataggtcctttaagtttctaaggtttcagataggttctttaagttt 29276705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 548 - 616
Target Start/End: Complemental strand, 31827240 - 31827172
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  31827240 tttaagtttcatgtttgtttcagatagattttttaagtttctaaggtttcagataggtcctttaagttt 31827172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 541 - 616
Target Start/End: Complemental strand, 15315466 - 15315391
Alignment:
Q  541 cgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||| ||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  15315466 cgggtcctttaagtatcatgtttgtttcagatagatcctttaagtttttaaggtttcagataggtcttttaagttt 15315391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 541 - 616
Target Start/End: Complemental strand, 15495835 - 15495760
Alignment:
Q  541 cgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||| ||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  15495835 cgggtcctttaagtatcatgtttgtttcagatagatcctttaagtttttaaggtttcagataggtcttttaagttt 15495760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 541 - 619
Target Start/End: Original strand, 1043648 - 1043726
Alignment:
Q  541 cgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttgga 619  Q
    |||||| |||||||||||| ||||||||| ||||||||||||| |||||||||| ||||||| ||||||||||||||||    
T  1043648 cgggtcctttaagtttcatgtttgtttcaaatagatcctttaaatttctaaggtctcagatatgtcctttaagtttgga 1043726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 543 - 616
Target Start/End: Complemental strand, 9779230 - 9779157
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| |||||||||||| ||||||| |||||| |||||||||||| ||||||||||||||||||||||||||||    
T  9779230 ggtcctttaagtttcatgtttgttttagataggtcctttaagtttttaaggtttcagataggtcctttaagttt 9779157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 548 - 617
Target Start/End: Complemental strand, 15891931 - 15891862
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttg 617  Q
    ||||||||| | ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  15891931 tttaagtttaacatttgtttcagatacgtcctttaagtttctaaggtttcagataggtcctttaagtttg 15891862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 531 - 616
Target Start/End: Original strand, 28463805 - 28463890
Alignment:
Q  531 aatacatcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| ||| || ||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||||| || ||||||||||    
T  28463805 aatacctccccgagtcctttaagtttcatgtttgtttcagataaatcctttaagtttctaaggtttcagataagtactttaagttt 28463890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 531 - 616
Target Start/End: Original strand, 29457118 - 29457203
Alignment:
Q  531 aatacatcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||| || ||| |||||||||||| |||||||||||||| || |||||||||||||| |||||||||||| ||||||||||    
T  29457118 aatacatccccgagtcctttaagtttcatgtttgtttcagataggtcttttaagtttctaagatttcagataggttctttaagttt 29457203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 548 - 616
Target Start/End: Complemental strand, 9117862 - 9117794
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||    
T  9117862 tttaagtttcacatttgtttcagataggtcctttaagtttctaagctttcagataagtcctttaagttt 9117794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 543 - 616
Target Start/End: Original strand, 23403821 - 23403894
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| ||||||||||   |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  23403821 ggtcctttaagtttcgagtttgtttcggataggtcctttaagtttctaaggtttcagataggtcctttaagttt 23403894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 543 - 616
Target Start/End: Original strand, 31826845 - 31826918
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| |||||||||||  ||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  31826845 ggtcctttaagtttcacgtttattttagataggtcctttaagtttctaaggtttcagataggtcctttaagttt 31826918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 548 - 616
Target Start/End: Original strand, 15315176 - 15315244
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||| | |||||||| ||||| ||||||||||||||||||||||||||||||| |||||||||    
T  15315176 tttaagtttcgtgtttgtttcggataggtcctttaagtttctaaggtttcagataggtcatttaagttt 15315244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 548 - 616
Target Start/End: Original strand, 15495545 - 15495613
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||| | |||||||| ||||| ||||||||||||||||||||||||||||||| |||||||||    
T  15495545 tttaagtttcgtgtttgtttcggataggtcctttaagtttctaaggtttcagataggtcatttaagttt 15495613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 550 - 610
Target Start/End: Complemental strand, 31618787 - 31618727
Alignment:
Q  550 taagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtccttt 610  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  31618787 taagtttcaagtttgtttcagatagatcctttaagtttctaaggtttcaaataggtccttt 31618727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 548 - 616
Target Start/End: Original strand, 38507079 - 38507147
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||| ||||| |||||||||||||||||||||||||| ||| ||||||||| |||||||||    
T  38507079 tttaagtttcatgtttgtctcagatagatcctttaagtttctaagattttagataggtcatttaagttt 38507147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 541 - 612
Target Start/End: Complemental strand, 23404175 - 23404104
Alignment:
Q  541 cgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaa 612  Q
    |||||| |||||||||||| ||||| |||||||||||||||||||| ||||||||||||||| || ||||||    
T  23404175 cgggtcctttaagtttcatgtttgtctcagatagatcctttaagttactaaggtttcagatatgttctttaa 23404104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 545 - 616
Target Start/End: Complemental strand, 44318511 - 44318440
Alignment:
Q  545 tcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||| |  |||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||    
T  44318511 tcttttaagtttgaagtttgtttcggataggtcctttaaatttctaaggtttcagataggtcctttaagttt 44318440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 542 - 616
Target Start/End: Original strand, 22444615 - 22444689
Alignment:
Q  542 gggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| |||||||||||  |||||||| ||||| |||||||||||||||| ||||||||||||| ||||||||||    
T  22444615 gggtcctttaagtttcacgtttgtttcggataggtcctttaagtttctaaagtttcagataggttctttaagttt 22444689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 542 - 616
Target Start/End: Original strand, 31618368 - 31618442
Alignment:
Q  542 gggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| |||||||||||  |||||||||||||| |||||||| |||||||||||||| ||| |||||||||||||    
T  31618368 gggtcctttaagtttcacgtttgtttcagataggtcctttaaatttctaaggtttcaaataagtcctttaagttt 31618442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 542 - 616
Target Start/End: Original strand, 42691907 - 42691981
Alignment:
Q  542 gggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| |||||||||||  | ||||| | |||||||||||||||||||||||||| |||||||||||||||||||    
T  42691907 gggtcatttaagtttcacgtctgttttaaatagatcctttaagtttctaaggttttagataggtcctttaagttt 42691981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 548 - 616
Target Start/End: Original strand, 15300598 - 15300667
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatccttt-aagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||| |||||||||||||| |||||| |||||||||| |||| |||||||||||||||||||    
T  15300598 tttaagtttcatgtttgtttcagataggtccttttaagtttctaaagttttagataggtcctttaagttt 15300667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 543 - 616
Target Start/End: Complemental strand, 15300957 - 15300884
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| ||||||||||   |||||||| ||||| || ||||||||||||||||||||||||||||||||||||||    
T  15300957 ggtcctttaagtttcgagtttgtttcggatagttcatttaagtttctaaggtttcagataggtcctttaagttt 15300884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 543 - 616
Target Start/End: Complemental strand, 15315404 - 15315331
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||||||   |||||| | ||||  |||||||||||||||||||||||||||||||||||||||||    
T  15315404 ggtcttttaagtttcgagtttgttacggataagtcctttaagtttctaaggtttcagataggtcctttaagttt 15315331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 548 - 616
Target Start/End: Original strand, 15480967 - 15481036
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatccttt-aagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||| |||||||||||||| |||||| |||||||||| |||| |||||||||||||||||||    
T  15480967 tttaagtttcatgtttgtttcagataggtccttttaagtttctaaagttttagataggtcctttaagttt 15481036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 543 - 616
Target Start/End: Complemental strand, 15481326 - 15481253
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| ||||||||||   |||||||| ||||| || ||||||||||||||||||||||||||||||||||||||    
T  15481326 ggtcctttaagtttcgagtttgtttcggatagttcatttaagtttctaaggtttcagataggtcctttaagttt 15481253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 543 - 616
Target Start/End: Complemental strand, 15495773 - 15495700
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||||||   |||||| | ||||  |||||||||||||||||||||||||||||||||||||||||    
T  15495773 ggtcttttaagtttcgagtttgttacggataagtcctttaagtttctaaggtttcagataggtcctttaagttt 15495700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 543 - 616
Target Start/End: Original strand, 15891643 - 15891716
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| ||||||||| |  |||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||    
T  15891643 ggtcctttaagtttgaagtttgtttcagataggtcctttaagtttctaaggttttagatagatcctttaagttt 15891716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 543 - 616
Target Start/End: Complemental strand, 15891876 - 15891803
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| ||||||||| |  |||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||    
T  15891876 ggtcctttaagtttgaagtttgtttcagataggtcctttaagtttctaaggttttagatagatcctttaagttt 15891803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 543 - 616
Target Start/End: Original strand, 24043803 - 24043876
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| ||||||||| |  |||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||    
T  24043803 ggtcctttaagtttgaagtttgtttcggataggtcctttaagtttctaaggtttcaaataggtcctttaagttt 24043876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 548 - 617
Target Start/End: Complemental strand, 44318568 - 44318499
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttg 617  Q
    |||||||||||| |||| |||| ||||||||||||||||||||| ||||||||||| || ||||||||||    
T  44318568 tttaagtttcatgtttgcttcaaatagatcctttaagtttctaatgtttcagatagatcttttaagtttg 44318499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 548 - 616
Target Start/End: Original strand, 6954 - 7022
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||| ||||||||||||| ||| |||||||||||||||||||| ||| ||| |||||||||    
T  6954 tttaagtttcatgtttgtttcagatatatcttttaagtttctaaggtttcaaataagtcatttaagttt 7022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 548 - 616
Target Start/End: Complemental strand, 9117802 - 9117734
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||   |||||||| ||||| |||||||||||||||||||||||||||||||||||| ||||    
T  9117802 tttaagtttcgagtttgtttcggataggtcctttaagtttctaaggtttcagataggtcctttaggttt 9117734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 548 - 616
Target Start/End: Complemental strand, 22445034 - 22444966
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||||| | || ||| ||||||||||    
T  22445034 tttaagtttcatgtttgtttcagataaatcctttaagtttctaaggtttaacatgggttctttaagttt 22444966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 548 - 616
Target Start/End: Complemental strand, 23275449 - 23275381
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||   |||||||| ||||| ||||||||||||||||||||||||||||||| |||||||||    
T  23275449 tttaagtttcgagtttgtttcggataggtcctttaagtttctaaggtttcagataggtcatttaagttt 23275381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 548 - 616
Target Start/End: Complemental strand, 23275509 - 23275441
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||| |  ||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||    
T  23275509 tttaagtttaacgtttgtttcatataggtcctttaagtttctaaggtttcagatatgtcctttaagttt 23275441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 548 - 616
Target Start/End: Original strand, 29276697 - 29276765
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||   |||||||  ||||| |||||||||||||||||||||||||||||||||||||||||    
T  29276697 tttaagtttcgagtttgttttggataggtcctttaagtttctaaggtttcagataggtcctttaagttt 29276765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 561 - 616
Target Start/End: Original strand, 1043728 - 1043783
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||||  || ||||||||||||||||||||||||||||||||||||||    
T  1043728 tttgtttcagatatgtcatttaagtttctaaggtttcagataggtcctttaagttt 1043783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 561 - 616
Target Start/End: Complemental strand, 22444961 - 22444906
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||    
T  22444961 tttgtttcggataggtcctttaagtttctaaggtttcagataagtcctttaagttt 22444906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 546 - 616
Target Start/End: Original strand, 1691843 - 1691912
Alignment:
Q  546 cttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||| || |||||||| |||||||| ||||||||||||||||||| ||||| ||||||||||||    
T  1691843 cttttaagttttatctttgtttcggatagatc-tttaagtttctaaggtttcggatagatcctttaagttt 1691912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 542 - 616
Target Start/End: Complemental strand, 6121944 - 6121870
Alignment:
Q  542 gggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| |||||||||||  |||||||||||||  ||||||||||||||||||||| ||||||||| | |||||||    
T  6121944 gggtcctttaagtttcacgtttgtttcagatatgtcctttaagtttctaaggttttagataggtcatataagttt 6121870  T

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Target: chr8; HSP #54
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 542 - 616
Target Start/End: Original strand, 15315111 - 15315184
Alignment:
Q  542 gggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| |||||||||||  |||||||||||||| |||||||| || ||||||||||||||| |||||||||||||    
T  15315111 gggtcctttaagtttcacgtttgtttcagataggtcctttaaatt-ctaaggtttcagataagtcctttaagttt 15315184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 542 - 616
Target Start/End: Original strand, 15495480 - 15495553
Alignment:
Q  542 gggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| |||||||||||  |||||||||||||| |||||||| || ||||||||||||||| |||||||||||||    
T  15495480 gggtcctttaagtttcacgtttgtttcagataggtcctttaaatt-ctaaggtttcagataagtcctttaagttt 15495553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 542 - 616
Target Start/End: Complemental strand, 29276975 - 29276901
Alignment:
Q  542 gggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| ||||||||| |  ||| |||||||||  |||||||||||||||||||||||||||| ||||||||||||    
T  29276975 gggtcctttaagttttacgtttatttcagatatgtcctttaagtttctaaggtttcagatagatcctttaagttt 29276901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 570 - 616
Target Start/End: Complemental strand, 31827159 - 31827113
Alignment:
Q  570 gatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||    
T  31827159 gataggtcctttaagtttctaaggtttcagataggtcctttaagttt 31827113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 543 - 616
Target Start/End: Complemental strand, 7242 - 7169
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| ||||||||||   |||||||  ||||  |||||||||||||||||||||||||||||||||||||||||    
T  7242 ggtcctttaagtttcgagtttgttttggatatgtcctttaagtttctaaggtttcagataggtcctttaagttt 7169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 531 - 616
Target Start/End: Original strand, 2250708 - 2250793
Alignment:
Q  531 aatacatcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| |||||| ||  |||||||||||| ||||||| | | || |||||||||||| |||||||||||||| |||||||||||||    
T  2250708 aatacctcctcgagttctttaagtttcatgtttgttttatacaggtcctttaagtttttaaggtttcagataagtcctttaagttt 2250793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 543 - 616
Target Start/End: Original strand, 9117574 - 9117647
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| ||||||||||   |||||||  ||||| ||||||||||||||||||||||||||| |||||||||||||    
T  9117574 ggtcctttaagtttcgagtttgttttggataggtcctttaagtttctaaggtttcagatatgtcctttaagttt 9117647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 571 - 616
Target Start/End: Complemental strand, 15300989 - 15300944
Alignment:
Q  571 atagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  15300989 atagatcctttaagtttctaaagtttcagataggtcctttaagttt 15300944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 571 - 616
Target Start/End: Complemental strand, 15481358 - 15481313
Alignment:
Q  571 atagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  15481358 atagatcctttaagtttctaaagtttcagataggtcctttaagttt 15481313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 548 - 616
Target Start/End: Original strand, 23403765 - 23403834
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaagg-tttcagataggtcctttaagttt 616  Q
    ||||||||||   |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||    
T  23403765 tttaagtttcgagtttgtttcggataggtcctttaagtttctaaggttttcagataggtcctttaagttt 23403834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 567 - 616
Target Start/End: Complemental strand, 23404060 - 23404011
Alignment:
Q  567 tcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  23404060 tcagataggtcctttaagtttctaaggtgtcagataggtcctttaagttt 23404011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 548 - 621
Target Start/End: Original strand, 35435328 - 35435401
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttggaat 621  Q
    ||||| |||||  ||| |||||||| | || |||||||||||||||||||||||||||||||||||||| ||||    
T  35435328 tttaaatttcacgtttatttcagatgggtcttttaagtttctaaggtttcagataggtcctttaagtttcgaat 35435401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 548 - 616
Target Start/End: Complemental strand, 1692260 - 1692192
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| ||||| ||||||| || |||| |||||||||||| |||||||||||||| |||||||||||||    
T  1692260 tttaaatttcacatttgttccaaataggtcctttaagtttataaggtttcagatatgtcctttaagttt 1692192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 548 - 616
Target Start/End: Original strand, 23403705 - 23403773
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||| |  ||||||||| |||| |||||||||||||||| |||||||||| |||||||||||||    
T  23403705 tttaagtttaacgtttgtttcaaataggtcctttaagtttctaaagtttcagatatgtcctttaagttt 23403773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 548 - 616
Target Start/End: Original strand, 29457195 - 29457263
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||   |||||||| ||||  |||||||||||||||||||||||||||| ||||||||||||    
T  29457195 tttaagtttcgagtttgtttcggatatgtcctttaagtttctaaggtttcagatagatcctttaagttt 29457263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 561 - 616
Target Start/End: Complemental strand, 4157920 - 4157865
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||||| |||||||||||| |||||||||||||| || ||||||||||    
T  4157920 tttgtttcagataggtcctttaagtttttaaggtttcagatatgttctttaagttt 4157865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 561 - 616
Target Start/End: Original strand, 9779015 - 9779070
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||| ||||  || ||||||||||||||||||||||||||||||||||||||    
T  9779015 tttgtttcggatatgtcttttaagtttctaaggtttcagataggtcctttaagttt 9779070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 561 - 616
Target Start/End: Complemental strand, 23404095 - 23404040
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||| ||||| |||||||| |||||||||| |||||||||||||||||||||    
T  23404095 tttgtttcggataggtcctttaaatttctaaggtgtcagataggtcctttaagttt 23404040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 541 - 616
Target Start/End: Original strand, 27702336 - 27702411
Alignment:
Q  541 cgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||| ||||  |||||| ||||||||| |||| || ||||||||| ||||||||||||||| ||||||||||||    
T  27702336 cgggtcctttagatttcatgtttgtttcacatagctcttttaagtttttaaggtttcagatagatcctttaagttt 27702411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 561 - 616
Target Start/End: Original strand, 28463895 - 28463950
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||| ||||| ||||||||||||||||||||| ||||||||| |||||||||    
T  28463895 tttgtttcggataggtcctttaagtttctaaggttttagataggtcttttaagttt 28463950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 548 - 606
Target Start/End: Complemental strand, 42620868 - 42620809
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcc-tttaagtttctaaggtttcagataggtc 606  Q
    |||||||||||| |||||||||||||||||| ||||||||| ||| ||||||||||||||    
T  42620868 tttaagtttcatgtttgtttcagatagatccttttaagtttttaaagtttcagataggtc 42620809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 542 - 616
Target Start/End: Complemental strand, 1044003 - 1043929
Alignment:
Q  542 gggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| ||||||||| |  |||||||  ||||  || ||||||||||||||||||||||||||||||||||||||    
T  1044003 gggtcctttaagtttaacgtttgttttcgataagtcatttaagtttctaaggtttcagataggtcctttaagttt 1043929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 570 - 616
Target Start/End: Original strand, 1691926 - 1691972
Alignment:
Q  570 gatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||    
T  1691926 gataaatcctttaagtttctaaggtttcagataggtcatttaagttt 1691972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 542 - 616
Target Start/End: Complemental strand, 44728481 - 44728407
Alignment:
Q  542 gggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| |||||||||||  ||||||||||| |  |||||||||||| ||||||||||||||| | ||||||||||    
T  44728481 gggtcatttaagtttcacgtttgtttcagacaagtcctttaagtttttaaggtttcagatagattctttaagttt 44728407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 531 - 616
Target Start/End: Original strand, 2257054 - 2257139
Alignment:
Q  531 aatacatcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| ||| || ||| ||||||||| |  |||||||||||||| |||||||||||||||| |||||||||| ||| |||| ||||    
T  2257054 aatacctccacgagtcctttaagttttacgtttgtttcagataggtcctttaagtttctaaagtttcagataagtcatttacgttt 2257139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 531 - 616
Target Start/End: Complemental strand, 2257502 - 2257417
Alignment:
Q  531 aatacatcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| |||||| ||| |||||||||||| ||||||| | | || ||||||||| || |||||||||||||| ||||||| |||||    
T  2257502 aatacctcctcgagtcctttaagtttcatgtttgttttatacaggtcctttaagcttttaaggtttcagataagtcctttcagttt 2257417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 576 - 616
Target Start/End: Complemental strand, 7269 - 7229
Alignment:
Q  576 tcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  7269 tcctttaagtttctaaggtttcaaataggtcctttaagttt 7229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 548 - 616
Target Start/End: Complemental strand, 2251139 - 2251071
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||| |  |||||||||||||| |||||||||||||||| |||||||||| ||| |||| ||||    
T  2251139 tttaagttttacgtttgtttcagataggtcctttaagtttctaaagtttcagataagtcatttacgttt 2251071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 564 - 616
Target Start/End: Original strand, 9778958 - 9779010
Alignment:
Q  564 gtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| ||||||||||||||||||||||| |||||||||| || ||||||||||    
T  9778958 gttttagatagatcctttaagtttctaaagtttcagataagttctttaagttt 9779010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 548 - 616
Target Start/End: Complemental strand, 11482705 - 11482638
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||  |||||||||||||| | |||||||||| ||||| |||||||| |||||||||||||    
T  11482705 tttaagtttcaagtttgtttcagataggttctttaagtttttaagg-ttcagataagtcctttaagttt 11482638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #84
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 543 - 619
Target Start/End: Complemental strand, 27702631 - 27702555
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttgga 619  Q
    |||| ||||||||||   |||||||| ||| | |||||||| ||||||||| |||||||||||| ||||||||||||    
T  27702631 ggtcctttaagtttcgagtttgtttcggatcggtcctttaaatttctaaggcttcagataggtcttttaagtttgga 27702555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #85
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 548 - 616
Target Start/End: Complemental strand, 38507361 - 38507293
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||| |  ||||||| | |||| || ||||||||||||||||||||||||||| ||||||||||    
T  38507361 tttaagtttaacgtttgttttaaataggtcgtttaagtttctaaggtttcagataggttctttaagttt 38507293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #86
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 561 - 616
Target Start/End: Original strand, 27702416 - 27702471
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| ||| ||||| | ||||| |||||||||||||||||||||||||||||||||    
T  27702416 tttggttcggataggtactttatgtttctaaggtttcagataggtcctttaagttt 27702471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #87
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 561 - 616
Target Start/End: Complemental strand, 42692123 - 42692068
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||| || || | ||||||||||||||||||||||||||||| |||||||||    
T  42692123 tttgtttcggacaggttctttaagtttctaaggtttcagataggtcttttaagttt 42692068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #88
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 546 - 616
Target Start/End: Complemental strand, 31618730 - 31618660
Alignment:
Q  546 cttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||||   ||||||||| || | |||||||||||||||| |||| ||||| |||||||||||||    
T  31618730 cttttaagtttcgagtttgtttcaaatgggtcctttaagtttctaaagttttagataagtcctttaagttt 31618660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #89
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 564 - 610
Target Start/End: Complemental strand, 38507316 - 38507270
Alignment:
Q  564 gtttcagatagatcctttaagtttctaaggtttcagataggtccttt 610  Q
    ||||||||||| | ||||||||||||||||||||| |||||||||||    
T  38507316 gtttcagataggttctttaagtttctaaggtttcatataggtccttt 38507270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #90
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 567 - 616
Target Start/End: Complemental strand, 23404031 - 23403982
Alignment:
Q  567 tcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||| ||||||||||||||||||| ||| ||| |||||||||||||    
T  23404031 tcagataggtcctttaagtttctaaggtgtcaaatacgtcctttaagttt 23403982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #91
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 543 - 616
Target Start/End: Original strand, 29218416 - 29218489
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| ||||||||| |  |||||||| ||||| |||||||| ||| |||||||| | |||||||||||||||||    
T  29218416 ggtcctttaagtttgaagtttgtttcggataggtcctttaaatttttaaggttttatataggtcctttaagttt 29218489  T

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Target: chr8; HSP #92
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 543 - 612
Target Start/End: Complemental strand, 35435615 - 35435546
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaa 612  Q
    |||| ||||||||||   |||||||| ||||  |||||||||||||||| ||||||||||| ||||||||    
T  35435615 ggtcctttaagtttcgagtttgtttcggatatgtcctttaagtttctaatgtttcagatagatcctttaa 35435546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #93
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 548 - 616
Target Start/End: Original strand, 2250785 - 2250853
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||   |||||||| ||||| |||| |||||||||||||||| |||| |||| |||||||||    
T  2250785 tttaagtttcgagtttgtttcggataggtcctgtaagtttctaaggttttagatcggtcatttaagttt 2250853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #94
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 576 - 616
Target Start/End: Complemental strand, 35236856 - 35236816
Alignment:
Q  576 tcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||||||||||||||| ||||||| |||||||||    
T  35236856 tcctttaagtttctaaggtttcaaataggtcatttaagttt 35236816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #95
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 561 - 616
Target Start/End: Original strand, 4157667 - 4157722
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||| ||||| |||||||| |||||||||||| |||||| |||| |||||||    
T  4157667 tttgtttcggataggtcctttaaatttctaaggtttaagatagatcctataagttt 4157722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #96
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 561 - 616
Target Start/End: Complemental strand, 24469483 - 24469429
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||| ||||| |||||||||||| |||||||||||||| || ||||||||||    
T  24469483 tttgtttcggataggtcctttaagtttttaaggtttcagatatgt-ctttaagttt 24469429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #97
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 561 - 612
Target Start/End: Original strand, 42620486 - 42620537
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaa 612  Q
    |||||||||||||  |||||||||||| |||| ||||||||| |||||||||    
T  42620486 tttgtttcagatatgtcctttaagtttttaagatttcagataagtcctttaa 42620537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #98
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 541 - 600
Target Start/End: Complemental strand, 42692204 - 42692146
Alignment:
Q  541 cgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcaga 600  Q
    |||||| ||||| |||||| ||| ||||||||||||| ||||||||| ||||||||||||    
T  42692204 cgggtcctttaaatttcatgttt-tttcagatagatcttttaagtttataaggtttcaga 42692146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #99
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 543 - 616
Target Start/End: Original strand, 38507134 - 38507208
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatccttt-aagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| ||||||||||   |||||||  ||||| |||||| || ||||||||||||||||||| ||||||||||||    
T  38507134 ggtcatttaagtttcgagtttgttttggataggtccttttaaatttctaaggtttcagatagatcctttaagttt 38507208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #100
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 579 - 616
Target Start/End: Complemental strand, 29276878 - 29276841
Alignment:
Q  579 tttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||||| |||||||||| |||||||||||||    
T  29276878 tttaagtttctaaagtttcagatatgtcctttaagttt 29276841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #101
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 547 - 616
Target Start/End: Complemental strand, 42620807 - 42620738
Alignment:
Q  547 ttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||   |||| || |||| | || ||||||||| ||||||||||||| ||||||||||||||    
T  42620807 ttttaagtttcgagtttggttaagatgggtcttttaagtttttaaggtttcagattggtcctttaagttt 42620738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #102
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 616
Target Start/End: Original strand, 6121584 - 6121652
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||   |||||||| |||||||||||| ||||| | ||||||| || || ||||||||||||    
T  6121584 tttaagtttcgagtttgtttcggatagatcctttgagtttgttaggtttcggagagatcctttaagttt 6121652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 69; Significance: 1e-30; HSPs: 71)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 532 - 616
Target Start/End: Original strand, 32712166 - 32712250
Alignment:
Q  532 atacatcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  32712166 atacctcctcgggtcttttaagtttcatgtttgtttcagatagatcctttaagtttctaagatttcagataagtcctttaagttt 32712250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 531 - 617
Target Start/End: Original strand, 1695708 - 1695794
Alignment:
Q  531 aatacatcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttg 617  Q
    ||||| ||| |||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  1695708 aatacctccccgggtcctttaagttttatgtttgtttcagatagatcctttaagtttctaaggtttcagattggtcctttaagtttg 1695794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 548 - 616
Target Start/End: Complemental strand, 20492099 - 20492031
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  20492099 tttaagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcagataggtcatttaagttt 20492031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 548 - 617
Target Start/End: Complemental strand, 1102962 - 1102893
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttg 617  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  1102962 tttaagtttcatatttgttttagatagaccctttaagtttctaaggtttcagataggtcttttaagtttg 1102893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 531 - 616
Target Start/End: Complemental strand, 38823840 - 38823755
Alignment:
Q  531 aatacatcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| ||| |||||| ||||||||| || |||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  38823840 aatacctccccgggtcctttaagttttatgtttgtttcagatagatcctttaagtttccaaagtttcagataggtcctttaagttt 38823755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 545 - 616
Target Start/End: Complemental strand, 5739580 - 5739509
Alignment:
Q  545 tcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  5739580 tcttttaagtttcacgtttgtttcagatagatcttttaagtttctaaggtttcagataggttctttaagttt 5739509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 532 - 615
Target Start/End: Complemental strand, 29987580 - 29987497
Alignment:
Q  532 atacatcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtt 615  Q
    |||| ||| |||||| ||||||||| || ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  29987580 atacctccccgggtcctttaagttttatgtttgtttcagataaatcctttaagtttctaaggtttcaaataggtcctttaagtt 29987497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 537 - 612
Target Start/End: Complemental strand, 41811037 - 41810963
Alignment:
Q  537 tcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaa 612  Q
    ||||||| || |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  41811037 tcctcggatcatttaagtttcatgtttgtttcagatagatc-tttaagtttctaaggtttcagataggtcctttaa 41810963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 541 - 616
Target Start/End: Original strand, 45721140 - 45721215
Alignment:
Q  541 cgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||| |||||||||||| |||||||||| |||||| |||||||||||||||||||||||| |||||||||||||    
T  45721140 cgggtcctttaagtttcatgtttgtttcaggtagatcttttaagtttctaaggtttcagatatgtcctttaagttt 45721215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 549 - 619
Target Start/End: Complemental strand, 29386445 - 29386375
Alignment:
Q  549 ttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttgga 619  Q
    ||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||||    
T  29386445 ttaagtttcatgtttgtttcagatagatcatttaagtttctaaagtttcagataggtcttttaagtttgga 29386375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 548 - 617
Target Start/End: Original strand, 4974842 - 4974911
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttg 617  Q
    ||||| ||| || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  4974842 tttaaattttatgtttgtttcagatagatcctttaagtttctaaggttttagataggtcctttaagtttg 4974911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 543 - 616
Target Start/End: Complemental strand, 15615497 - 15615424
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||||||   |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  15615497 ggtcttttaagtttcgagtttgtttcagataggtcctttaagtttctaaggtttcagatatgtcctttaagttt 15615424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 543 - 616
Target Start/End: Complemental strand, 20492044 - 20491971
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| ||||||||||   |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  20492044 ggtcatttaagtttcgagtttgtttcagataggtcctttaagtttctaaggtttcagataggtcctttaagttt 20491971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 548 - 616
Target Start/End: Original strand, 5739392 - 5739460
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||  |||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  5739392 tttaagtttcacgtttgtttcagatatgtcctttaagtttctaaggtttcagataggtcctttaagttt 5739460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 548 - 616
Target Start/End: Original strand, 39834008 - 39834076
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||  |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  39834008 tttaagtttcacgtttgtttcagataggtcctttaagtttctaaggtttcagataagtcctttaagttt 39834076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 548 - 616
Target Start/End: Complemental strand, 49113261 - 49113193
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  49113261 tttaagtttcatgtttatttcagatagatcctttaagtttctaaggtttcagacatgtcctttaagttt 49113193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 561 - 616
Target Start/End: Original strand, 18088100 - 18088155
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  18088100 tttgtttcagatagatcctttaagtttctaaggtttcagataggtactttaagttt 18088155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 543 - 616
Target Start/End: Original strand, 1695780 - 1695853
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| ||||||||| |  ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  1695780 ggtcctttaagtttgaagtttgtttcaaataggtcctttaagtttctaaggtttcagataggtcctttaagttt 1695853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 543 - 616
Target Start/End: Original strand, 4974897 - 4974970
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| ||||||||| |  |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  4974897 ggtcctttaagtttgaagtttgtttcggataggtcctttaagtttctaaggtttcagataggtcctttaagttt 4974970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 541 - 610
Target Start/End: Original strand, 5277303 - 5277372
Alignment:
Q  541 cgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtccttt 610  Q
    |||||| |||||||||| | ||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  5277303 cgggtcctttaagtttcctgtttgtttcagatagatcttttaagtttctgaggtttcagataggtccttt 5277372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 543 - 616
Target Start/End: Original strand, 20491715 - 20491788
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| |||||||||||| |||||||  |||||||| ||||||||| ||||||||||||||||||||||||||||    
T  20491715 ggtcctttaagtttcatgtttgttttggatagatcttttaagtttttaaggtttcagataggtcctttaagttt 20491788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 548 - 612
Target Start/End: Complemental strand, 4965146 - 4965082
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaa 612  Q
    |||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||||| |||||    
T  4965146 tttaagtttcatgtttgttttagatagatcatttaagtttctaaggtttcagataggtcttttaa 4965082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 548 - 616
Target Start/End: Original strand, 41810745 - 41810813
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||  |||||||||||||| |  ||||||||||||||||||||||||||||||||||||||    
T  41810745 tttaagtttcacgtttgtttcagataggttatttaagtttctaaggtttcagataggtcctttaagttt 41810813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 561 - 616
Target Start/End: Original strand, 4764916 - 4764971
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  4764916 tttgtttcggataggtcctttaagtttctaaggtttcagataggtcctttaagttt 4764971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 544 - 615
Target Start/End: Original strand, 49588075 - 49588146
Alignment:
Q  544 gtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtt 615  Q
    ||||||||||||||   |||||||| ||||| |||||||||||||||||||||||||||| |||||||||||    
T  49588075 gtcttttaagtttcgagtttgtttcggataggtcctttaagtttctaaggtttcagatagatcctttaagtt 49588146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 543 - 616
Target Start/End: Complemental strand, 1102907 - 1102833
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaagg-tttcagataggtcctttaagttt 616  Q
    |||||||||||||| |  |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||    
T  1102907 ggtcttttaagtttgaagtttgtttcggataggtcctttaagtttctaaggttttcagataggtcctttaagttt 1102833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 548 - 617
Target Start/End: Original strand, 4764842 - 4764912
Alignment:
Q  548 tttaagtttcatatttgttt-cagatagatcctttaagtttctaaggtttcagataggtcctttaagtttg 617  Q
    |||||||||||| ||| ||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  4764842 tttaagtttcatgttttttttcagatagatcctttaagtttctaagatttcaaataggtcctttaagtttg 4764912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 546 - 616
Target Start/End: Original strand, 29386161 - 29386231
Alignment:
Q  546 cttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||||   |||||||| ||||| || ||||||||||||||||||||||||||||||||||||||    
T  29386161 cttttaagtttcgagtttgtttcggataggtcatttaagtttctaaggtttcagataggtcctttaagttt 29386231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 548 - 614
Target Start/End: Complemental strand, 42371806 - 42371740
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagt 614  Q
    ||||| |||||| ||||||||||||||||||||||| |||| ||||||||||||| |||||||||||    
T  42371806 tttaaatttcatgtttgtttcagatagatcctttaaatttccaaggtttcagatatgtcctttaagt 42371740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 562 - 616
Target Start/End: Original strand, 45721221 - 45721275
Alignment:
Q  562 ttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  45721221 ttgtttcggatagatcatttaagtttctaaggtttcagataggtcctttaagttt 45721275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 531 - 616
Target Start/End: Original strand, 18030194 - 18030279
Alignment:
Q  531 aatacatcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||| | ||| || |||||||||||| | | ||||| ||||||| ||||||||| ||||||||||||||||||||||||||||    
T  18030194 aatacattcccggatcctttaagtttcatgtctatttcaaatagatcttttaagtttttaaggtttcagataggtcctttaagttt 18030279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 548 - 616
Target Start/End: Original strand, 1102678 - 1102746
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||   ||||||||||||||  |||||||||||||||| |||||||||||||||||||||||    
T  1102678 tttaagtttcgagtttgtttcagataggccctttaagtttctaagatttcagataggtcctttaagttt 1102746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 548 - 616
Target Start/End: Complemental strand, 3339237 - 3339170
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||  ||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||    
T  3339237 tttaagtttcacttttgtttcagatagatc-tttaagtttctaatgtttcaaataggtcctttaagttt 3339170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 548 - 616
Target Start/End: Original strand, 29987221 - 29987289
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||  |||||||||||||| |||||||||||| ||||||||||||||| | ||||||||||    
T  29987221 tttaagtttcacgtttgtttcagataggtcctttaagtttttaaggtttcagatagattctttaagttt 29987289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 548 - 616
Target Start/End: Complemental strand, 39834352 - 39834284
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||  ||||||| ||||||||| ||||||||| ||||||||||||||||||||||| ||||    
T  39834352 tttaagtttcacgtttgttttagatagatcttttaagtttataaggtttcagataggtcctttatgttt 39834284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 548 - 616
Target Start/End: Complemental strand, 45721559 - 45721491
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||  |||||||||||||  || |||||||||||||||||||| |||||||||||||||||    
T  45721559 tttaagtttcacgtttgtttcagatatgtcttttaagtttctaaggtttcatataggtcctttaagttt 45721491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 548 - 616
Target Start/End: Complemental strand, 48074437 - 48074369
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||   |||||||||||||  ||||||||||||||||||||||||||||||| |||||||||    
T  48074437 tttaagtttcgagtttgtttcagatatgtcctttaagtttctaaggtttcagataggtcatttaagttt 48074369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 561 - 612
Target Start/End: Original strand, 4964936 - 4964987
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaa 612  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  4964936 tttgtttcggataggtcctttaagtttctaaggtttcagataggtcctttaa 4964987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 561 - 616
Target Start/End: Complemental strand, 43142901 - 43142846
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||    
T  43142901 tttgtttcagataggtcctttaagtttctaagatttcagataggtcctttgagttt 43142846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 542 - 616
Target Start/End: Complemental strand, 4765192 - 4765118
Alignment:
Q  542 gggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| |||||||||||  |||||||||||||| | ||||||||||||||||||| | |||||| ||||||||||    
T  4765192 gggtcctttaagtttcacgtttgtttcagataggttctttaagtttctaaggttttaaataggttctttaagttt 4765118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 542 - 616
Target Start/End: Original strand, 15615200 - 15615277
Alignment:
Q  542 gggtcttttaagtttcatatttgtttcagatagatcc-tttaagtttctaagg--tttcagataggtcctttaagttt 616  Q
    ||||| |||||||||| |||||||||||||||||||| |||||||||||||||  |||||| ||||| ||||||||||    
T  15615200 gggtcctttaagtttcgtatttgtttcagatagatccttttaagtttctaaggtttttcaggtaggttctttaagttt 15615277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 544 - 616
Target Start/End: Original strand, 18087991 - 18088064
Alignment:
Q  544 gtcttttaagtttcatatttgtttcagatagatccttt-aagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||||| |  ||||||| |||||| |||||| |||||||||||||||||||||| ||||||||||||    
T  18087991 gtcttttaagtttaacgtttgtttaagataggtccttttaagtttctaaggtttcagatagatcctttaagttt 18088064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 543 - 616
Target Start/End: Complemental strand, 29386391 - 29386318
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||||||    ||||||||  |||| || ||||||||||||||||||||||||||||||||||||||    
T  29386391 ggtcttttaagtttggagtttgtttcgaataggtcttttaagtttctaaggtttcagataggtcctttaagttt 29386318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 543 - 616
Target Start/End: Original strand, 41810800 - 41810873
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| ||||||||| |  |||||||| ||||  || ||||||||||||||||||||||||||||||||||||||    
T  41810800 ggtcctttaagttttaagtttgtttcggatatgtcatttaagtttctaaggtttcagataggtcctttaagttt 41810873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 543 - 616
Target Start/End: Original strand, 42371402 - 42371475
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| ||||||||||| |||||||||||||||  ||||||| ||||||| |||| ||||| |||||||||||||    
T  42371402 ggtcatttaagtttcacatttgtttcagataggacctttaattttctaatgttttagataagtcctttaagttt 42371475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 547 - 616
Target Start/End: Original strand, 43142690 - 43142759
Alignment:
Q  547 ttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||   |||||||| |||||||| |||||||||||||||| ||||||| |||||||||||||    
T  43142690 ttttaagtttcgagtttgtttcggatagatcttttaagtttctaaggtgtcagatatgtcctttaagttt 43142759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 531 - 616
Target Start/End: Complemental strand, 48074513 - 48074429
Alignment:
Q  531 aatacatcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| ||| ||| || ||||||||| || |||||||||||||| |||||||||||||||| |||| ||||| |||||||||||||    
T  48074513 aatacctccccggatcctttaagttttatgtttgtttcagataggtcctttaagtttctaa-gtttaagataagtcctttaagttt 48074429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 548 - 616
Target Start/End: Original strand, 15615269 - 15615337
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||   |||||||| ||||| ||||||||||||||||||||||| |||| ||||||||||||    
T  15615269 tttaagtttcgattttgtttcggataggtcctttaagtttctaaggtttcaaatagatcctttaagttt 15615337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 548 - 616
Target Start/End: Original strand, 47824481 - 47824548
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||  ||||||||||| || || ||||||||| ||||||||||||||||||||||||||||    
T  47824481 tttaagtttcacgtttgtttcagaaaggtc-tttaagtttttaaggtttcagataggtcctttaagttt 47824548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 561 - 612
Target Start/End: Complemental strand, 18088297 - 18088246
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaa 612  Q
    |||||||| ||||| |||||||||||| ||||||||||||||||||||||||    
T  18088297 tttgtttcggataggtcctttaagtttttaaggtttcagataggtcctttaa 18088246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 561 - 616
Target Start/End: Complemental strand, 29987491 - 29987436
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||  |||| |||||||||||||||||||||||||||| ||||||||||||    
T  29987491 tttgtttcgaataggtcctttaagtttctaaggtttcagatagatcctttaagttt 29987436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 546 - 616
Target Start/End: Original strand, 5277369 - 5277438
Alignment:
Q  546 cttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||  | |||||||| |||||||||||||||||||||||||| | ||||||| ||||||||||    
T  5277369 cttttaagttttgtgtttgtttcggatagatcctttaagtttctaaggttcccgataggt-ctttaagttt 5277438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 561 - 607
Target Start/End: Complemental strand, 38823750 - 38823704
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcc 607  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||    
T  38823750 tttgtttcggataggtcctttaagtttctaaggtttcagataggtcc 38823704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 543 - 616
Target Start/End: Original strand, 18030266 - 18030338
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| ||||||||||   |||||||| ||||| || |||||||||||||||||||| |||||||||||||||||    
T  18030266 ggtcctttaagtttcgagtttgtttcggataggtc-tttaagtttctaaggtttcaaataggtcctttaagttt 18030338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 549 - 602
Target Start/End: Complemental strand, 18030628 - 18030575
Alignment:
Q  549 ttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagata 602  Q
    |||| ||||||||||||||||||||  |||||||| ||||||||||||||||||    
T  18030628 ttaaatttcatatttgtttcagataagtcctttaaatttctaaggtttcagata 18030575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 561 - 610
Target Start/End: Complemental strand, 39834279 - 39834230
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtccttt 610  Q
    ||||||| |||||| || ||||||||||||||||||||||||||||||||    
T  39834279 tttgttttagataggtcatttaagtttctaaggtttcagataggtccttt 39834230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 548 - 616
Target Start/End: Original strand, 1102618 - 1102686
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| |||||| ||||||| |||||| |||||||| |||||||||||||||| | || ||||||||||    
T  1102618 tttaaatttcatgtttgttttagataggtcctttaaatttctaaggtttcagacatgttctttaagttt 1102686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 548 - 616
Target Start/End: Complemental strand, 4765126 - 4765058
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||   |||||||| ||||  ||||||||||||||||| |||||||||||| ||||||||||    
T  4765126 tttaagtttcgagtttgtttcggatatgtcctttaagtttctaagatttcagataggttctttaagttt 4765058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 543 - 619
Target Start/End: Complemental strand, 18088374 - 18088299
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttgga 619  Q
    |||| |||||||||||| ||||||| ||||| ||| |||||||||||||| ||||| |||||| ||| |||||||||    
T  18088374 ggtcctttaagtttcatgtttgttttagataaatcatttaagtttctaagatttcaaataggt-cttcaagtttgga 18088299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 548 - 616
Target Start/End: Original strand, 29987281 - 29987349
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||   |||||||| |||||  |||||||| || ||||||||||||||||||||||||||||    
T  29987281 tttaagtttcgagtttgtttcggataggccctttaagcttttaaggtttcagataggtcctttaagttt 29987349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 540 - 616
Target Start/End: Original strand, 49588012 - 49588087
Alignment:
Q  540 tcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||| |||||||| ||| ||||||||||||| ||||||||| ||| |||||||| ||||| ||| |||||||||    
T  49588012 tcgggtcctttaagtt-catgtttgtttcagataaatcctttaattttttaaggttttagatatgtcttttaagttt 49588087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 561 - 616
Target Start/End: Complemental strand, 42371733 - 42371678
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||||  || |||  |||||||||||||||||||||||||||||||||    
T  42371733 tttgtttcagatatgtcatttgtgtttctaaggtttcagataggtcctttaagttt 42371678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 548 - 606
Target Start/End: Complemental strand, 49588399 - 49588340
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatccttt-aagtttctaaggtttcagataggtc 606  Q
    |||||||||||  |||||||||||||  |||||| |||||||||||||||||||||||||    
T  49588399 tttaagtttcaagtttgtttcagatatgtccttttaagtttctaaggtttcagataggtc 49588340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 548 - 616
Target Start/End: Original strand, 4964892 - 4964962
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaag---gtttcagataggtcctttaagttt 616  Q
    ||||||||||| |||||||||||| ||||||||||||||| | ||   ||||| ||||||||||||||||||    
T  4964892 tttaagtttcacatttgtttcagacagatcctttaagttt-tgagtttgtttcggataggtcctttaagttt 4964962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 543 - 616
Target Start/End: Original strand, 15057238 - 15057311
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| |||||||||||  |||||||| ||||  | ||||||||||||||| ||| |||||||||||||| ||||    
T  15057238 ggtcgtttaagtttcaagtttgtttcggatatgttctttaagtttctaagattttagataggtcctttaggttt 15057311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 548 - 600
Target Start/End: Original strand, 22572681 - 22572733
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcaga 600  Q
    |||||||||||  ||||| |||||||| |||||||||||||||| ||||||||    
T  22572681 tttaagtttcacttttgtatcagataggtcctttaagtttctaaagtttcaga 22572733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 548 - 616
Target Start/End: Original strand, 39834068 - 39834136
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||   |||||||  ||||| |||||||||||| ||| |||||||||| |||||||||||||    
T  39834068 tttaagtttcgagtttgttttggataggtcctttaagtttttaaagtttcagatatgtcctttaagttt 39834136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 606
Target Start/End: Complemental strand, 41542781 - 41542706
Alignment:
Q  531 aatacatcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtc 606  Q
    ||||| ||| ||| || ||||| |||||  |||||||||||||| || ||||| ||||||| ||||||||||||||    
T  41542781 aatacctccccggatcctttaaatttcacgtttgtttcagataggtcatttaactttctaaagtttcagataggtc 41542706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 569 - 616
Target Start/End: Original strand, 43142652 - 43142699
Alignment:
Q  569 agatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||| |||||||||||||||||||||||| ||  |||||||||    
T  43142652 agatagatcttttaagtttctaaggtttcagatatgttttttaagttt 43142699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 549 - 603
Target Start/End: Complemental strand, 24025992 - 24025938
Alignment:
Q  549 ttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagatag 603  Q
    ||||||||||| ||||||||| ||||||| ||||| ||| |||||||||| ||||    
T  24025992 ttaagtttcatgtttgtttcaaatagatcatttaaatttataaggtttcatatag 24025938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 567 - 611
Target Start/End: Complemental strand, 24025847 - 24025803
Alignment:
Q  567 tcagatagatcctttaagtttctaaggtttcagataggtccttta 611  Q
    ||||||||||||||||| ||| || ||||||||||| ||||||||    
T  24025847 tcagatagatcctttaaatttatagggtttcagatatgtccttta 24025803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 5e-30; HSPs: 85)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 541 - 616
Target Start/End: Complemental strand, 42430725 - 42430650
Alignment:
Q  541 cgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42430725 cgggtcctttaagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 42430650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 531 - 616
Target Start/End: Original strand, 3173223 - 3173308
Alignment:
Q  531 aatacatcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| || ||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  3173223 aatacctcatcgggtcctttaagtttcatgtttgtttcagatagatcctttaagtttttaaggtttcagataggtcctttaagttt 3173308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 543 - 616
Target Start/End: Complemental strand, 48840342 - 48840269
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  48840342 ggtcctttaagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcaaataggtcctttaagttt 48840269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 531 - 619
Target Start/End: Complemental strand, 46855374 - 46855286
Alignment:
Q  531 aatacatcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttgga 619  Q
    ||||| ||| |||||| ||||||||| || ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  46855374 aatacctccccgggtcctttaagttttatgtttgtttcagatagatcctttaagtttatgaggtttcagataggtcctttaagtttgga 46855286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 541 - 616
Target Start/End: Original strand, 44449008 - 44449083
Alignment:
Q  541 cgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||| ||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  44449008 cgggtcctttaaatttcatgtttgtttcagatagatcctttaagtttttaaggtttcagataggtcctttaagttt 44449083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 548 - 617
Target Start/End: Complemental strand, 8919821 - 8919752
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttg 617  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  8919821 tttaagtttcatatttatttcagatagatcttttaagtttctaaggtttcagataagtcctttaagtttg 8919752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 548 - 612
Target Start/End: Original strand, 18942313 - 18942377
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaa 612  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  18942313 tttaagtttcatgtttgtttcagatagatcctttaagtttctgaggtttcagataggtcctttaa 18942377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 548 - 616
Target Start/End: Complemental strand, 18942656 - 18942588
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  18942656 tttaagtttcatgtttgtttcagataaatcctttaagtttataaggtttcagataggtcctttaagttt 18942588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 545 - 619
Target Start/End: Complemental strand, 9907896 - 9907822
Alignment:
Q  545 tcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttgga 619  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||  ||||||||||||    
T  9907896 tcttttaagtttcatgtttatttcagatagatcctttaagtttctaaagtttcagataggttatttaagtttgga 9907822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 542 - 616
Target Start/End: Original strand, 42758953 - 42759027
Alignment:
Q  542 gggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| |||||||||||| | ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  42758953 gggtcctttaagtttcatgtatgtttcagatagatcttttaagtttataaggtttcagataggtcctttaagttt 42759027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 548 - 616
Target Start/End: Original strand, 30648221 - 30648289
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||| ||| | |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  30648221 tttaagtttcatgtttatgtcagatagatcctttaagtttctaaggtttcatataggtcctttaagttt 30648289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 541 - 616
Target Start/End: Complemental strand, 6723562 - 6723487
Alignment:
Q  541 cgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||| ||||||||| || |||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||    
T  6723562 cgggtcctttaagttttatgtttgtttcagatagatccgttaagtttctaaggttttagatagatcctttaagttt 6723487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 551 - 606
Target Start/End: Complemental strand, 45910029 - 45909974
Alignment:
Q  551 aagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtc 606  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  45910029 aagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagatgggtc 45909974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 542 - 616
Target Start/End: Complemental strand, 29036491 - 29036418
Alignment:
Q  542 gggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| ||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||    
T  29036491 gggtcctttaagtttcacatttgtttctgataggtcctttaagtttctaaggtttcagataggt-ctttaagttt 29036418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 542 - 616
Target Start/End: Original strand, 37042988 - 37043062
Alignment:
Q  542 gggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| |||||||||||| |||||||  ||||||| |||||||||||||||||||||||||| ||||||||||||    
T  37042988 gggtcctttaagtttcatgtttgtttaggatagatgctttaagtttctaaggtttcagatagatcctttaagttt 37043062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 542 - 616
Target Start/End: Complemental strand, 37043412 - 37043339
Alignment:
Q  542 gggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| |||||||||||||||||||||||||||||| ||||| ||||||| ||||||||| ||||||||||||||    
T  37043412 gggtcctttaagtttcatatttgtttcagatagatcttttaaatttctaaagtttcagat-ggtcctttaagttt 37043339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 542 - 616
Target Start/End: Original strand, 37393330 - 37393403
Alignment:
Q  542 gggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| |||||||||||| ||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||    
T  37393330 gggtcctttaagtttcatgtttgtttcagatagatcctctaagtttttaagg-ttcagataggtcctttaagttt 37393403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 542 - 619
Target Start/End: Original strand, 9907486 - 9907563
Alignment:
Q  542 gggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttgga 619  Q
    ||||| ||||||||| |  |||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||    
T  9907486 gggtcatttaagtttaacgtttgtttcagataggtcctttaagtttttaaggttttagataggtcctttaagtttgga 9907563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 543 - 612
Target Start/End: Original strand, 10470520 - 10470589
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaa 612  Q
    |||| |||||| || || ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  10470520 ggtcctttaagatttatgtttgtttcagatagatcatttaagtttctaaggtttcagataggtcctttaa 10470589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 543 - 616
Target Start/End: Complemental strand, 30648540 - 30648467
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| |||||||||||| | ||| |||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  30648540 ggtcctttaagtttcatgtgtgtgtcagatagatcctttaagtttccaaggtttcagatatgtcctttaagttt 30648467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 543 - 616
Target Start/End: Original strand, 42759014 - 42759087
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| ||||||||||   |||||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  42759014 ggtcctttaagtttcgagtttgtttcagataggtcatttaagtttctaaggtttcagataggtcctttaagttt 42759087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 543 - 616
Target Start/End: Original strand, 47332348 - 47332420
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| |||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  47332348 ggtcgtttaagtttcatgtttgttttagatagatcatttaagtttctaaggtttcagataggt-ctttaagttt 47332420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 564 - 616
Target Start/End: Complemental strand, 3173636 - 3173584
Alignment:
Q  564 gtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  3173636 gtttcagataggtcctttaagtttctaaggtttcagataggtcctttaagttt 3173584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 548 - 616
Target Start/End: Original strand, 10096964 - 10097032
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||| || ||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||    
T  10096964 tttaagttttatgtttgtttcaaatagatcctttaaatttctaaggtttcagataagtcctttaagttt 10097032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 543 - 619
Target Start/End: Original strand, 22563717 - 22563793
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttgga 619  Q
    |||| |||||||||||| ||| ||| ||||| ||| |||||| ||||||||||||||||||||||||||||||||||    
T  22563717 ggtcctttaagtttcatgtttattttagatatatcatttaaggttctaaggtttcagataggtcctttaagtttgga 22563793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 548 - 616
Target Start/End: Complemental strand, 22564065 - 22563997
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||| |  |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  22564065 tttaagtttaacgtttgtttcagataggtcctttaagtttctaaggtttcagataagtcctttaagttt 22563997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 550 - 602
Target Start/End: Original strand, 35127458 - 35127510
Alignment:
Q  550 taagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagata 602  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  35127458 taagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcagata 35127510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 548 - 616
Target Start/End: Complemental strand, 47193597 - 47193529
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||| | ||||| ||||||||| |||||||||||||||||| |||||||||||||||||||    
T  47193597 tttaagtttcatgtatgttttagatagatcttttaagtttctaaggttttagataggtcctttaagttt 47193529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 543 - 614
Target Start/End: Complemental strand, 18942601 - 18942530
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagt 614  Q
    |||| |||||||||||  |||||||| ||||||||||||||||||||||| ||||||||||||| |||||||    
T  18942601 ggtcctttaagtttcaagtttgtttcggatagatcctttaagtttctaagatttcagataggtcatttaagt 18942530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 561 - 616
Target Start/End: Complemental strand, 45203855 - 45203800
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  45203855 tttgtttcggatagatcctttaagtttttaaggtttcagataggtcctttaagttt 45203800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 548 - 610
Target Start/End: Original strand, 29036142 - 29036204
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtccttt 610  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||| ||||| |||||||    
T  29036142 tttaagtttcatatttgtttcagatatatcctttaagtttcaaaggttttagataagtccttt 29036204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 542 - 616
Target Start/End: Original strand, 39304982 - 39305056
Alignment:
Q  542 gggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| |||||||||||  |||||||||||||||| |||||||||| |||||||||| |||| ||||||||||||    
T  39304982 gggtcctttaagtttcacgtttgtttcagatagattctttaagtttttaaggtttcatatagatcctttaagttt 39305056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 542 - 616
Target Start/End: Complemental strand, 45443481 - 45443407
Alignment:
Q  542 gggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| |||||||||||  ||||||| |||||| |||||||||||| | ||||||||||||||||||||||||||    
T  45443481 gggtcctttaagtttcacgtttgttttagataggtcctttaagtttttgaggtttcagataggtcctttaagttt 45443407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 543 - 616
Target Start/End: Original strand, 3173295 - 3173368
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| ||||||||||   |||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||    
T  3173295 ggtcctttaagtttcgagtttgtttcggataggtcctttaagtttctaaggtttcagataagtcctttaagttt 3173368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 571 - 616
Target Start/End: Original strand, 8919530 - 8919575
Alignment:
Q  571 atagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  8919530 atagatcctttaagtttctaaggtttcagataggtcctttaagttt 8919575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 543 - 616
Target Start/End: Original strand, 8919562 - 8919635
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| |||||||||||  |||||||| ||||| || ||||||||| ||||||||||||||||||||||||||||    
T  8919562 ggtcctttaagtttcaagtttgtttcggataggtcttttaagtttttaaggtttcagataggtcctttaagttt 8919635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 547 - 616
Target Start/End: Complemental strand, 22642202 - 22642133
Alignment:
Q  547 ttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||||  ||||||||||| || ||||||||||||||||||||||||||| ||| |||||||||    
T  22642202 ttttaagtttcacgtttgtttcagacaggtcctttaagtttctaaggtttcagatatgtcatttaagttt 22642133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 531 - 616
Target Start/End: Original strand, 45203568 - 45203653
Alignment:
Q  531 aatacatcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||| |||| |||||||| |||||| ||| |||||||||||||||||||| || |||||||| ||||| || ||||||||||    
T  45203568 aatacatcttcggatcttttaaatttcatgtttatttcagatagatcctttaagattttaaggttttagataagttctttaagttt 45203653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 561 - 610
Target Start/End: Original strand, 48840098 - 48840147
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtccttt 610  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  48840098 tttgtttcggatagatcctttaagtttctaaggtttcagataggtccttt 48840147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 548 - 616
Target Start/End: Complemental strand, 6723495 - 6723427
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||   |||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||    
T  6723495 tttaagtttcgagtttgtttcggataggtcctttaagtttctaaggtttcaaataggtcctttaagttt 6723427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 548 - 616
Target Start/End: Complemental strand, 22564005 - 22563937
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||   |||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||    
T  22564005 tttaagtttcgagtttgtttcggataggtcctttaagtttctaagatttcagataggtcctttaagttt 22563937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 548 - 616
Target Start/End: Original strand, 44941075 - 44941143
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||| |  ||| |||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  44941075 tttaagtttgaagtttatttcggatagatcctttaagtttctaaggtttcagatagatcctttaagttt 44941143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 544 - 616
Target Start/End: Complemental strand, 45324993 - 45324921
Alignment:
Q  544 gtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||||| || ||| ||| ||||||||||||| ||||||||| |||||||||| |||||||||||||    
T  45324993 gtcttttaagttttatgtttcttttagatagatcctttgagtttctaaagtttcagataagtcctttaagttt 45324921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 565 - 616
Target Start/End: Original strand, 45203662 - 45203713
Alignment:
Q  565 tttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||||||    
T  45203662 tttcggatagatcctttaagtttctaaggtttcagataggtcttttaagttt 45203713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 548 - 615
Target Start/End: Original strand, 45443192 - 45443259
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtt 615  Q
    |||||||||||| | ||||||||||| ||| ||||||||| ||||||||||||||| |||||||||||    
T  45443192 tttaagtttcatgtctgtttcagataaatcatttaagtttttaaggtttcagatagatcctttaagtt 45443259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 542 - 616
Target Start/End: Complemental strand, 42759308 - 42759234
Alignment:
Q  542 gggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| |||||||||||  ||| ||||| |||| || ||||||||||||||||||||||||||| ||||||||||    
T  42759308 gggtcctttaagtttcacgtttatttcatataggtcttttaagtttctaaggtttcagataggttctttaagttt 42759234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 548 - 616
Target Start/End: Original strand, 22641913 - 22641986
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaa-----gtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| ||||||| ||||||||||||| |||||||||     |||||||||||||||||||||||||||||||||    
T  22641913 tttatgtttcatgtttgtttcagatacatcctttaagttaagtttctaaggtttcagataggtcctttaagttt 22641986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 543 - 616
Target Start/End: Complemental strand, 42430663 - 42430590
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| ||||||||||   |||||||| ||||| ||||||||||||||||||||| ||||||||| |||||||||    
T  42430663 ggtcctttaagtttcgagtttgtttcggataggtcctttaagtttctaaggtttaagataggtcatttaagttt 42430590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 548 - 617
Target Start/End: Original strand, 44941015 - 44941084
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttg 617  Q
    |||||||||||| ||||||| | ||||||| |||||||||||||||||| ||||| ||| ||||||||||    
T  44941015 tttaagtttcatgtttgttttaaatagatcatttaagtttctaaggtttaagataagtcatttaagtttg 44941084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 543 - 616
Target Start/End: Complemental strand, 47193542 - 47193469
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| ||||||||||   ||| |||| ||||||||||| ||||||||||||||| |||||||||||||||||||    
T  47193542 ggtcctttaagtttcgagtttatttcggatagatccttcaagtttctaaggttttagataggtcctttaagttt 47193469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 543 - 616
Target Start/End: Complemental strand, 48840282 - 48840209
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| ||||||||||   |||||||| ||||| ||||||||||||||||||||| ||||| |||||||||||||    
T  48840282 ggtcctttaagtttcgagtttgtttcggataggtcctttaagtttctaaggttttagatatgtcctttaagttt 48840209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 576 - 616
Target Start/End: Complemental strand, 9907745 - 9907705
Alignment:
Q  576 tcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  9907745 tcctttaagtttctaaggtttcagataggtcctttaagttt 9907705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 561 - 617
Target Start/End: Complemental strand, 9907820 - 9907764
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttg 617  Q
    |||||||| ||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  9907820 tttgtttcggataggtcctttaagtttataaggtttcagatagatcctttaagtttg 9907764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 544 - 616
Target Start/End: Complemental strand, 35127801 - 35127729
Alignment:
Q  544 gtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||||||  ||||||| |||||  |||||||| |||||||||| ||||||||||||||| |||||    
T  35127801 gtcttttaagtttcacgtttgttttagatatgtcctttaaatttctaaggtatcagataggtccttttagttt 35127729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 548 - 616
Target Start/End: Complemental strand, 38995310 - 38995242
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||| | |||||||| || ||| |||||||||||| |||||||||||||| |||||||||||||    
T  38995310 tttaagtttaacatttgttttagttaggtcctttaagtttttaaggtttcagataagtcctttaagttt 38995242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 548 - 616
Target Start/End: Complemental strand, 45324929 - 45324861
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||   |||||||||||||| |||||||||||| |||||||||||||| || ||||||||||    
T  45324929 tttaagtttcgagtttgtttcagataggtcctttaagtttttaaggtttcagataagttctttaagttt 45324861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 561 - 616
Target Start/End: Original strand, 22563795 - 22563850
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||| ||||| ||||||||||||||||||||||||||| ||| |||||||||    
T  22563795 tttgtttcggataggtcctttaagtttctaaggtttcagataagtcttttaagttt 22563850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 561 - 616
Target Start/End: Original strand, 45443265 - 45443320
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||| ||||  | |||||||||||||||||||||||||||||||||||||||    
T  45443265 tttgtttcggatatgttctttaagtttctaaggtttcagataggtcctttaagttt 45443320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 561 - 606
Target Start/End: Original strand, 10470597 - 10470642
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtc 606  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||    
T  10470597 tttgtttcggataggtcctttaagtttctaaggtttcagataggtc 10470642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 547 - 612
Target Start/End: Complemental strand, 18808203 - 18808138
Alignment:
Q  547 ttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaa 612  Q
    ||||||||||||  ||||||| |||||| ||||||| ||||||||||||| |||||| ||||||||    
T  18808203 ttttaagtttcacgtttgttttagataggtcctttatgtttctaaggttttagatagatcctttaa 18808138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 543 - 616
Target Start/End: Original strand, 30648276 - 30648349
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| ||||||||||   |||||||| ||||  ||||||||| ||||||||||||||||| |||||||||||||    
T  30648276 ggtcctttaagtttcgagtttgtttcggataagtcctttaagcttctaaggtttcagataagtcctttaagttt 30648349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 543 - 616
Target Start/End: Original strand, 44449070 - 44449143
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| ||||||||||   |||||||| ||||  ||||||||||||||||||||||||||| || ||||||||||    
T  44449070 ggtcctttaagtttcgagtttgtttcggataagtcctttaagtttctaaggtttcagataagttctttaagttt 44449143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 543 - 616
Target Start/End: Complemental strand, 44941303 - 44941230
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| ||||||||||   |||||||  ||||| ||||||||||||||||| ||||||||| |||||||||||||    
T  44941303 ggtcctttaagtttcgagtttgttttggataggtcctttaagtttctaagatttcagataagtcctttaagttt 44941230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 543 - 612
Target Start/End: Original strand, 48840021 - 48840089
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaa 612  Q
    |||| |||||||||||  |||||||||||||| ||||||||  |||||||||||||||||||| ||||||    
T  48840021 ggtcctttaagtttcacgtttgtttcagataggtcctttaa-attctaaggtttcagataggttctttaa 48840089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 548 - 616
Target Start/End: Complemental strand, 29036426 - 29036358
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||   |||||||| |||||  ||||||||||| ||||||||||||||||| ||||||||||    
T  29036426 tttaagtttcgagtttgtttcggataggccctttaagtttttaaggtttcagataggttctttaagttt 29036358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 548 - 616
Target Start/End: Original strand, 39305048 - 39305115
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||   |||||||| ||||||||||||| ||||||||||||| |||||||| ||||||||||    
T  39305048 tttaagtttcgagtttgtttcggatagatcctttacgtttctaaggtttgagataggt-ctttaagttt 39305115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 548 - 612
Target Start/End: Complemental strand, 42759242 - 42759178
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaa 612  Q
    ||||||||||   |||||||| ||||  ||||||||||||||||| |||||||||||||||||||    
T  42759242 tttaagtttcgagtttgtttcggataagtcctttaagtttctaagatttcagataggtcctttaa 42759178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 548 - 616
Target Start/End: Complemental strand, 44941358 - 44941290
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||| |||||||| |||||  || |||| ||| ||||| |||||||||||||||||||||||    
T  44941358 tttaagtttcacatttgttttagataagtcatttatgttgctaagctttcagataggtcctttaagttt 44941290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 561 - 616
Target Start/End: Original strand, 18942386 - 18942441
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||| ||||| | ||||||||||||||| ||||||||||||| |||||||||    
T  18942386 tttgtttcggataggttctttaagtttctaagttttcagataggtcttttaagttt 18942441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 561 - 616
Target Start/End: Complemental strand, 22642128 - 22642073
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||| ||||  |||||||||||| |||||||| |||||||||||||||||||    
T  22642128 tttgtttcggataagtcctttaagtttttaaggttttagataggtcctttaagttt 22642073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 531 - 602
Target Start/End: Original strand, 45324560 - 45324631
Alignment:
Q  531 aatacatcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagata 602  Q
    ||||| |||| ||||| ||||||||| |  |||||||||||||  || ||||||||||||||||||||||||    
T  45324560 aatacctccttgggtcctttaagttttacgtttgtttcagatatgtcgtttaagtttctaaggtttcagata 45324631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 561 - 616
Target Start/End: Complemental strand, 45909963 - 45909908
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||  |||||||||||||||||||| ||||| |||||||||||| ||||||    
T  45909963 tttgtttcgtatagatcctttaagtttctatggttttagataggtccttaaagttt 45909908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 546 - 616
Target Start/End: Original strand, 29036201 - 29036271
Alignment:
Q  546 cttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||| |  ||||||| |||||| | |||||||||||||||||||||| ||||| |||| |||||    
T  29036201 cttttaagtttgaagtttgtttaagataggttctttaagtttctaaggtttcaggtaggttctttgagttt 29036271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 542 - 616
Target Start/End: Complemental strand, 37393754 - 37393680
Alignment:
Q  542 gggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| ||||| |||||  ||||||| |||||| |||||||||||| ||||||||| |||||||| || ||||||    
T  37393754 gggtcgtttaaatttcacgtttgttttagataggtcctttaagtttttaaggtttcggataggtctttaaagttt 37393680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 548 - 616
Target Start/End: Original strand, 41718029 - 41718097
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatc-ctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||| |||| |||||||||||||||||  |||||||||| ||||||| |||| ||||||||||||||    
T  41718029 tttaagtatcatgtttgtttcagatagatctttttaagtttcaaaggttt-agatgggtcctttaagttt 41718097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 560 - 616
Target Start/End: Original strand, 35127527 - 35127582
Alignment:
Q  560 atttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||| ||||| || ||||| |||||||||||||||||||||| |||||||||    
T  35127527 atttgtttcggataggtc-tttaaatttctaaggtttcagataggtcatttaagttt 35127582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 543 - 583
Target Start/End: Complemental strand, 36987128 - 36987088
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaa 583  Q
    |||| |||||||||||| |||||||||||||||||||||||    
T  36987128 ggtcctttaagtttcatgtttgtttcagatagatcctttaa 36987088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 561 - 605
Target Start/End: Complemental strand, 37043334 - 37043290
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggt 605  Q
    |||||||| ||||| | ||||||||||||||||||||||||||||    
T  37043334 tttgtttcggataggttctttaagtttctaaggtttcagataggt 37043290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 561 - 616
Target Start/End: Original strand, 9907565 - 9907619
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||| ||||  ||||||| |||| ||||||||||||||||||||||||||||    
T  9907565 tttgtttcggatatgtccttta-gtttttaaggtttcagataggtcctttaagttt 9907619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 561 - 616
Target Start/End: Complemental strand, 46855284 - 46855229
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||  |||| ||||||||||||||||| |  ||||||||||||||||||||    
T  46855284 tttgtttcgaataggtcctttaagtttctaagatcccagataggtcctttaagttt 46855229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 548 - 594
Target Start/End: Original strand, 10097082 - 10097128
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggt 594  Q
    |||||||||||  ||| |||||||||| |||||||||||||||||||    
T  10097082 tttaagtttcaagtttatttcagataggtcctttaagtttctaaggt 10097128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 588
Target Start/End: Complemental strand, 10470895 - 10470838
Alignment:
Q  531 aatacatcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttc 588  Q
    |||||||||| | ||| |||||||||||  |||||||||||||| |||||||| ||||    
T  10470895 aatacatccttgagtcctttaagtttcacgtttgtttcagataggtcctttaactttc 10470838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 543 - 616
Target Start/End: Original strand, 37393390 - 37393463
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| ||||||||||   |||||||| ||||  ||||||||| || | ||||||||||||||||| ||||||||    
T  37393390 ggtcctttaagtttcgagtttgtttcggataagtcctttaagatttttaggtttcagataggtcccttaagttt 37393463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 609
Target Start/End: Complemental strand, 44449292 - 44449231
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctt 609  Q
    ||||||||| |  ||||||  |||||| |||||||| |||||||||||| ||||||||||||    
T  44449292 tttaagttttacgtttgttctagataggtcctttaaatttctaaggttttagataggtcctt 44449231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 569 - 617
Target Start/End: Original strand, 36986957 - 36987005
Alignment:
Q  569 agatagatcctttaagtttctaaggtttcagataggtcctttaagtttg 617  Q
    |||||| | |||||||||| |||||||||||||||||| ||||| ||||    
T  36986957 agataggttctttaagtttttaaggtttcagataggtcatttaaatttg 36987005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 2e-29; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 531 - 621
Target Start/End: Complemental strand, 9049863 - 9049773
Alignment:
Q  531 aatacatcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttggaat 621  Q
    |||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||    
T  9049863 aatacatcttcgggtcctttaagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcggataggtcctttaaatttcgaat 9049773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 539 - 612
Target Start/End: Complemental strand, 24012606 - 24012533
Alignment:
Q  539 ctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaa 612  Q
    |||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24012606 ctcgggtcctttaagtttcacgtttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaa 24012533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 542 - 616
Target Start/End: Original strand, 5985787 - 5985861
Alignment:
Q  542 gggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  5985787 gggtcctttaagtttcacgtttgtttcagatagatcctttaagtttctaaggtttcagatatgtcctttaagttt 5985861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 548 - 616
Target Start/End: Complemental strand, 4799646 - 4799578
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  4799646 tttaagtttcatgtttgtttcagatagatcatttaagtttctaaggtttcagatatgtcctttaagttt 4799578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 541 - 616
Target Start/End: Original strand, 29134920 - 29134995
Alignment:
Q  541 cgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||| |||||||||| ||| |||||||||||||    
T  29134920 cgggtcctttaagtttcatgtttgtttcagatagatcctttaagtttttaaggtttcaaatatgtcctttaagttt 29134995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 542 - 616
Target Start/End: Original strand, 4799328 - 4799402
Alignment:
Q  542 gggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| |||||||||||  ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  4799328 gggtcctttaagtttcacgtttgtttcagatagatcctttaagtttctaaagtttcagatatgtcctttaagttt 4799402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 548 - 617
Target Start/End: Complemental strand, 33041086 - 33041017
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttg 617  Q
    |||||||||||  |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  33041086 tttaagtttcacgtttgtttcagataggtcctttaagtttgtaaggtttcagataggtcctttaagtttg 33041017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 542 - 613
Target Start/End: Original strand, 14942262 - 14942333
Alignment:
Q  542 gggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaag 613  Q
    ||||| |||||||||||  ||||||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  14942262 gggtcctttaagtttcacgtttgttttagatagatcctttaaatttctaaggtttcagataggtcctttaag 14942333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 548 - 616
Target Start/End: Original strand, 5985853 - 5985921
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||| |  |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  5985853 tttaagttttaagtttgtttcggataggtcctttaagtttctaaggtttcagataggtcctttaagttt 5985921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 548 - 612
Target Start/End: Complemental strand, 5986116 - 5986052
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaa 612  Q
    |||||||||||||||| ||||||||| || ||||||||||||||||||| |||||||||||||||    
T  5986116 tttaagtttcatatttatttcagataaattctttaagtttctaaggttttagataggtcctttaa 5986052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 522 - 587
Target Start/End: Original strand, 7858584 - 7858649
Alignment:
Q  522 tttttgtcgaatacatcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagttt 587  Q
    |||||| | ||||| ||| |||||| |||||||||||| |||||||||||||||||||||||||||    
T  7858584 tttttgccaaatacctccccgggtcatttaagtttcatgtttgtttcagatagatcctttaagttt 7858649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 564 - 612
Target Start/End: Complemental strand, 4799601 - 4799553
Alignment:
Q  564 gtttcagatagatcctttaagtttctaaggtttcagataggtcctttaa 612  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||    
T  4799601 gtttcagatatgtcctttaagtttctaaggtttcagataggtcctttaa 4799553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 548 - 612
Target Start/End: Original strand, 29134987 - 29135051
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaa 612  Q
    ||||||||||   |||||||| |||||||||||||||||||||| |||||||||||||| |||||    
T  29134987 tttaagtttcgagtttgtttcggatagatcctttaagtttctaaagtttcagataggtcatttaa 29135051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 548 - 616
Target Start/End: Original strand, 7675581 - 7675649
Alignment:
Q  548 tttaagtttcatatttgtttcagata-gatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||  |||||||| |||| |||| ||||||||| ||||||||||||||||||||||||||||    
T  7675581 tttaagtttcacgtttgtttccgatatgatc-tttaagtttttaaggtttcagataggtcctttaagttt 7675649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 548 - 616
Target Start/End: Original strand, 7858641 - 7858709
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||| |  |||||||| ||||| ||||||||||||||||||||||||||  ||| |||||||||    
T  7858641 tttaagtttgaagtttgtttcggatagttcctttaagtttctaaggtttcagatgagtcatttaagttt 7858709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 550 - 616
Target Start/End: Original strand, 33033177 - 33033243
Alignment:
Q  550 taagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||  ||||||| |||||| || |||||||||||||||||| | ||||||| |||||||||    
T  33033177 taagtttcacgtttgttttagataggtcatttaagtttctaaggttttacataggtcatttaagttt 33033243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 576 - 616
Target Start/End: Complemental strand, 33040996 - 33040956
Alignment:
Q  576 tcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||||||||||||||||||| || |||||||||    
T  33040996 tcctttaagtttctaaggtttcagatagttcttttaagttt 33040956  T

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Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 561 - 616
Target Start/End: Original strand, 4799407 - 4799462
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||| ||||  || |||||||||||||||||||||||| |||||||| ||||    
T  4799407 tttgtttcggatatgtcatttaagtttctaaggtttcagataagtcctttaggttt 4799462  T

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Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 542 - 613
Target Start/End: Original strand, 4997656 - 4997727
Alignment:
Q  542 gggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaag 613  Q
    ||||| |||||||||||  ||||||| | ||| ||||||||||||| |||||||||| |||| || ||||||    
T  4997656 gggtcctttaagtttcacgtttgttttaaataaatcctttaagtttttaaggtttcatatagatcttttaag 4997727  T

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Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 551 - 605
Target Start/End: Original strand, 9049704 - 9049758
Alignment:
Q  551 aagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggt 605  Q
    ||||||||  ||| ||| |||||| |||||||||||| |||||||||||||||||    
T  9049704 aagtttcaagtttattttagataggtcctttaagtttttaaggtttcagataggt 9049758  T

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Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 575 - 616
Target Start/End: Complemental strand, 4997989 - 4997948
Alignment:
Q  575 atcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||| || |||||||||||||||||| |||||||||||||    
T  4997989 atccttgaaatttctaaggtttcagataagtcctttaagttt 4997948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 579 - 616
Target Start/End: Complemental strand, 7858832 - 7858796
Alignment:
Q  579 tttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  7858832 tttaagtttctaaggtttcagataggt-ctttaagttt 7858796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 576 - 612
Target Start/End: Original strand, 14942356 - 14942392
Alignment:
Q  576 tcctttaagtttctaaggtttcagataggtcctttaa 612  Q
    |||||||||||||||||||||||||||| || |||||    
T  14942356 tcctttaagtttctaaggtttcagatagatcatttaa 14942392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 580
Target Start/End: Complemental strand, 33033407 - 33033375
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctt 580  Q
    ||||||||||||| |||||||||||||||||||    
T  33033407 tttaagtttcatagttgtttcagatagatcctt 33033375  T

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Target: scaffold0016 (Bit Score: 65; Significance: 3e-28; HSPs: 4)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 531 - 619
Target Start/End: Original strand, 202280 - 202368
Alignment:
Q  531 aatacatcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttgga 619  Q
    ||||| ||| |||||| |||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  202280 aatacctccccgggtcctttaagtttcatgtttgtttcaaatagatcctttaagtttctaagatttcagataggtcctttaagtttgga 202368  T

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Target: scaffold0016; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 543 - 616
Target Start/End: Complemental strand, 202585 - 202512
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| ||||||||||   |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  202585 ggtcctttaagtttcgagtttgtttcggatagatcctttaagtttctaaggtttcagataggtcctttaagttt 202512  T

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Target: scaffold0016; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 561 - 616
Target Start/End: Original strand, 202370 - 202425
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||| ||||| || ||||||||||||||||||||||||||||||||||||||    
T  202370 tttgtttcggataggtcttttaagtttctaaggtttcagataggtcctttaagttt 202425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 579 - 616
Target Start/End: Complemental strand, 202609 - 202572
Alignment:
Q  579 tttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  202609 tttaaatttctaaagtttcagataggtcctttaagttt 202572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 3e-28; HSPs: 87)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 531 - 619
Target Start/End: Complemental strand, 45638437 - 45638349
Alignment:
Q  531 aatacatcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttgga 619  Q
    ||||||||| | |||| |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  45638437 aatacatccccaggtcctttaagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcaaataggtcctttaagtatgga 45638349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 541 - 616
Target Start/End: Original strand, 30851072 - 30851147
Alignment:
Q  541 cgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  30851072 cgggtcctttaagtttcatatttgtttcagatagatcctttaagtttttaacgtttcagataggtcctttaagttt 30851147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 541 - 617
Target Start/End: Complemental strand, 1844598 - 1844522
Alignment:
Q  541 cgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttg 617  Q
    |||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  1844598 cgggtcctttaagtttcatgtttatttcagatagatcctttaagtttctaaggtttcagatcggtcctttaagtttg 1844522  T

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Target: chr2; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 542 - 616
Target Start/End: Original strand, 45638071 - 45638145
Alignment:
Q  542 gggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| |||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  45638071 gggtcctttaagtttcatgtttgtttcagataggtcctttaagtttctaacgtttcagataggtcctttaagttt 45638145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 543 - 616
Target Start/End: Complemental strand, 5248259 - 5248186
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||||||  ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  5248259 ggtcttttaagtttcgaatttgtttcggataggtcctttaagtttctaaggtttcagataggtcctttaagttt 5248186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 531 - 616
Target Start/End: Complemental strand, 15286182 - 15286097
Alignment:
Q  531 aatacatcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||| | |||||  |||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  15286182 aatacattcccgggtactttaagtttcatgtttgtttcatatagatcctttaagtttataaggtttcagataggtcctttaagttt 15286097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 531 - 616
Target Start/End: Complemental strand, 15787099 - 15787014
Alignment:
Q  531 aatacatcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| ||| |||||| ||||| |||||| ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  15787099 aatacctccccgggtcctttaaatttcatgtttgtttcaaatagatcctttaagtttctaaggtttcagatatgtcctttaagttt 15787014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 548 - 616
Target Start/End: Complemental strand, 4603836 - 4603768
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  4603836 tttaagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcaaataggtcatttaagttt 4603768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 548 - 616
Target Start/End: Original strand, 5482889 - 5482957
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  5482889 tttaagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcagataggtgttttaagttt 5482957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 548 - 616
Target Start/End: Complemental strand, 33616099 - 33616031
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  33616099 tttaagtttcatgtttgttttagatagatcctttaagtttctaaggtttcagataggtactttaagttt 33616031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 548 - 616
Target Start/End: Original strand, 34334547 - 34334615
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  34334547 tttaagtttcatgtttgtttcagatagatcctttaagtttttaaggtttcagataggtcatttaagttt 34334615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 541 - 616
Target Start/End: Original strand, 43865363 - 43865438
Alignment:
Q  541 cgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||| ||||| |||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  43865363 cgggtcctttaaatttcatgtttgtttcagatagatcttttaagtttttaaggtttcagataggtcctttaagttt 43865438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 541 - 616
Target Start/End: Original strand, 44436429 - 44436504
Alignment:
Q  541 cgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||| ||||| |||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  44436429 cgggtcctttaaatttcatgtttttttcagatagatcctttaagtttctaaggtttcagataagtcctttaagttt 44436504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 543 - 616
Target Start/End: Original strand, 5247987 - 5248060
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| ||||||||| |  |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  5247987 ggtcctttaagtttgaagtttgtttcggatagatcctttaagtttctaaggtttcagataggtcctttaagttt 5248060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 531 - 616
Target Start/End: Complemental strand, 7882039 - 7881954
Alignment:
Q  531 aatacatcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| ||| || ||| |||||||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  7882039 aatacctccccgagtcctttaagtttcgtgtttttttcagatagatcatttaagtttctaaggtttcagataggtcctttaagttt 7881954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 542 - 619
Target Start/End: Complemental strand, 28182491 - 28182414
Alignment:
Q  542 gggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttgga 619  Q
    ||||| |||||||||||  |||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||    
T  28182491 gggtcctttaagtttcacgtttgtttcagataggtcctttaagtttctaaggttttagataggtcttttaagtttgga 28182414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 537 - 617
Target Start/End: Original strand, 5247921 - 5248001
Alignment:
Q  537 tcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttg 617  Q
    ||||||| || ||||||||| || ||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||    
T  5247921 tcctcggatcctttaagttttatgtttgtttcagataaatcatttaagtttcgaaggtttcagataggtcctttaagtttg 5248001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 548 - 616
Target Start/End: Complemental strand, 42553786 - 42553718
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||| ||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||    
T  42553786 tttaagtttcacatttgtttcagataggtcatttaagtttataaggtttcagataggtcctttaagttt 42553718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 548 - 619
Target Start/End: Original strand, 30512968 - 30513039
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttgga 619  Q
    |||||||||| | |||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||    
T  30512968 tttaagtttcttgtttgtttcagatagattctttaagtttctaaggtttaagatagatcctttaagtttgga 30513039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 561 - 616
Target Start/End: Complemental strand, 33953551 - 33953496
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33953551 tttgtttcagatagatcctttaagtttctaaagtttcagataggtcctttaagttt 33953496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 531 - 617
Target Start/End: Original strand, 11973920 - 11974006
Alignment:
Q  531 aatacatcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttg 617  Q
    ||||| ||| ||| || |||||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||| ||||| ||||    
T  11973920 aatacctccccggatcatttaagtttcatgtttgtttcagataaatcctttaagtttctaaggtttcagataagtcttttaaatttg 11974006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 542 - 616
Target Start/End: Original strand, 35125353 - 35125427
Alignment:
Q  542 gggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| ||||||||| || |||||||||||| | |||||||||||||||| ||||||||||||||||||||||||    
T  35125353 gggtcctttaagtttaatgtttgtttcagatcggtcctttaagtttctaaagtttcagataggtcctttaagttt 35125427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 531 - 616
Target Start/End: Original strand, 36387262 - 36387347
Alignment:
Q  531 aatacatcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| || |||||| ||||||||||||| ||||| |||||||||||||||||||||  ||| |||||||||||| ||||||||||    
T  36387262 aatacctcttcgggttttttaagtttcatgtttgtgtcagatagatcctttaagttttcaagatttcagataggttctttaagttt 36387347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 527 - 619
Target Start/End: Original strand, 1038868 - 1038960
Alignment:
Q  527 gtcgaatacatcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttgga 619  Q
    ||||||||| || || |||  |||||||||||  ||| ||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||    
T  1038868 gtcgaatacctcttcaggttctttaagtttcacgtttatttcagatagatcctttaagtttttaaagtttcagatagatcctttaagtttgga 1038960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 564 - 616
Target Start/End: Original strand, 5248066 - 5248118
Alignment:
Q  564 gtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  5248066 gtttcagataaatcctttaagtttctaaggtttcagataggtcctttaagttt 5248118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 544 - 616
Target Start/End: Complemental strand, 28238864 - 28238793
Alignment:
Q  544 gtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||||||| |||||||||||||||| |||||||||| |||| ||||||||||||||||| |||||    
T  28238864 gtcttttaagtttcatgtttgtttcagatagat-ctttaagtttttaagatttcagataggtcctttcagttt 28238793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 548 - 616
Target Start/End: Original strand, 29683594 - 29683662
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| |||||  |||||||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  29683594 tttaaatttcacgtttgtttcagataggttctttaagtttctaaggtttcagataggtcctttaagttt 29683662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 548 - 616
Target Start/End: Complemental strand, 30513250 - 30513182
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||  ||||||||||||   |||||||||||||||||||||||||||||||||||||||||    
T  30513250 tttaagtttcacgtttgtttcagatgagtcctttaagtttctaaggtttcagataggtcctttaagttt 30513182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 541 - 612
Target Start/End: Complemental strand, 7438537 - 7438466
Alignment:
Q  541 cgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaa 612  Q
    |||||| |||||||||||  ||||||| |||||| || ||||||||||||||||||||||||||||||||||    
T  7438537 cgggtcctttaagtttcacgtttgttttagataggtcttttaagtttctaaggtttcagataggtcctttaa 7438466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 541 - 616
Target Start/End: Original strand, 15285804 - 15285879
Alignment:
Q  541 cgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||| |||||||||||  |||||||||||||| || | ||||||||||||| ||||||||||||||||||||||    
T  15285804 cgggtcctttaagtttcaggtttgtttcagataggtcatgtaagtttctaaggcttcagataggtcctttaagttt 15285879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 549 - 616
Target Start/End: Original strand, 28238450 - 28238517
Alignment:
Q  549 ttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||  |||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||    
T  28238450 ttaagtttcacgtttgtttcagataggtcctttaagtttctaaggttttagataagtcctttaagttt 28238517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 548 - 614
Target Start/End: Complemental strand, 5483232 - 5483166
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagt 614  Q
    |||||||||||  |||||||||||||| ||||||||||||| ||||||||||||| |||||||||||    
T  5483232 tttaagtttcacgtttgtttcagataggtcctttaagtttccaaggtttcagataagtcctttaagt 5483166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 542 - 616
Target Start/End: Original strand, 33953165 - 33953239
Alignment:
Q  542 gggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| |||||||||||  ||||||||||||||  ||||||||||||||| |||||||||||||| |||||||||    
T  33953165 gggtcctttaagtttcaattttgtttcagataggccctttaagtttctaaagtttcagataggtcttttaagttt 33953239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 547 - 616
Target Start/End: Original strand, 5482948 - 5483017
Alignment:
Q  547 ttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||   |||||||| |||||||||||||||||| |||||||||||||| |||||||||||||    
T  5482948 ttttaagtttcgagtttgtttcggatagatcctttaagtttataaggtttcagataagtcctttaagttt 5483017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 543 - 616
Target Start/End: Original strand, 28582394 - 28582467
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| |||||||||||  |||||||||||| | ||||||| ||||||||||||||| |||||||||||||||||    
T  28582394 ggtcctttaagtttcacgtttgtttcagatgggtcctttacgtttctaaggtttcatataggtcctttaagttt 28582467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 543 - 616
Target Start/End: Original strand, 28582454 - 28582527
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| ||||||||||   |||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||    
T  28582454 ggtcctttaagtttcgagtttgtttcggataggtcctttaagtttctatggtttcagataggtcctttaagttt 28582527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 548 - 612
Target Start/End: Original strand, 4603464 - 4603528
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaa 612  Q
    |||||||||||  |||||||| ||||| ||||||||||||||||||||| |||||||||||||||    
T  4603464 tttaagtttcacgtttgtttcggataggtcctttaagtttctaaggttttagataggtcctttaa 4603528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 564 - 616
Target Start/End: Original strand, 7438323 - 7438375
Alignment:
Q  564 gtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  7438323 gtttcagataggtcctttaagtttctaaggtttcagataggtcttttaagttt 7438375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 548 - 616
Target Start/End: Complemental strand, 40343847 - 40343779
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||| |||||||| | |||||||||| | |||||||||||| |||||||||||||||||||    
T  40343847 tttaagtttcatgtttgtttctggtagatccttttaatttctaaggttttagataggtcctttaagttt 40343779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 561 - 616
Target Start/End: Complemental strand, 11974178 - 11974123
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||    
T  11974178 tttgtttcggataggtcctttaagtttctaaggtttcagatagatcctttaagttt 11974123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 549 - 616
Target Start/End: Complemental strand, 35125669 - 35125602
Alignment:
Q  549 ttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||| ||| ||||| ||||||| |||||||||||||||||||||||| || ||||||||||    
T  35125669 ttaagtttcatgtttatttcacatagatcatttaagtttctaaggtttcagataagtgctttaagttt 35125602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 561 - 616
Target Start/End: Complemental strand, 45638347 - 45638292
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||    
T  45638347 tttgtttcggataggtcctttaagtttctaaggtttcagatagatcctttaagttt 45638292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 542 - 616
Target Start/End: Complemental strand, 1039238 - 1039164
Alignment:
Q  542 gggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| |||||||||||  ||||||||||||| ||  |||| ||||||||||||| |||||||||||||||||||    
T  1039238 gggtcctttaagtttcacgtttgtttcagataaattttttaggtttctaaggttttagataggtcctttaagttt 1039164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 562 - 616
Target Start/End: Complemental strand, 28238788 - 28238734
Alignment:
Q  562 ttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||  |||| |||||||||||||||||||||||||||||||||||||||||    
T  28238788 ttgtttcgcataggtcctttaagtttctaaggtttcagataggtcctttaagttt 28238734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 542 - 616
Target Start/End: Complemental strand, 29683989 - 29683916
Alignment:
Q  542 gggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| ||| |||||||| |||||||||||||||| ||||||||||| ||| ||||||||| |||||||||||||    
T  29683989 gggtcctttcagtttcatgtttgtttcagatagatactttaagtttc-aagatttcagatatgtcctttaagttt 29683916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 571 - 617
Target Start/End: Complemental strand, 43671520 - 43671474
Alignment:
Q  571 atagatcctttaagtttctaaggtttcagataggtcctttaagtttg 617  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||    
T  43671520 atagatcctttaagtttctaaggttttagataggtcctttaagtttg 43671474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 543 - 613
Target Start/End: Original strand, 45638132 - 45638202
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaag 613  Q
    |||| ||||||||||   |||||||| ||||| |||||||||||||||| |||||||||||||||||||||    
T  45638132 ggtcctttaagtttcgagtttgtttcggataggtcctttaagtttctaaagtttcagataggtcctttaag 45638202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 543 - 616
Target Start/End: Complemental strand, 4603781 - 4603708
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| ||||||||||   ||||| |||||||  |||||||||||||||| ||||||||||||||||||||||||    
T  4603781 ggtcatttaagtttcgagtttgtatcagataagtcctttaagtttctaatgtttcagataggtcctttaagttt 4603708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 564 - 616
Target Start/End: Original strand, 5248037 - 5248089
Alignment:
Q  564 gtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||| |||||||||||||||||||||||||||  ||||||||||||    
T  5248037 gtttcagataggtcctttaagtttctaaggtttcagataaatcctttaagttt 5248089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 561 - 613
Target Start/End: Original strand, 30513041 - 30513093
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaag 613  Q
    |||||||| ||||| ||||||| ||||||||||||||||||||||||||||||    
T  30513041 tttgtttcggataggtcctttatgtttctaaggtttcagataggtcctttaag 30513093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 548 - 616
Target Start/End: Complemental strand, 30823728 - 30823660
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||| |  ||||||| ||||||||| ||||| ||||||||||||||||||||| ||||||||||    
T  30823728 tttaagttttacgtttgttttagatagatcatttaattttctaaggtttcagataggttctttaagttt 30823660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 564 - 616
Target Start/End: Original strand, 35125404 - 35125456
Alignment:
Q  564 gtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||| |||||||||||||||||||||||||| |||| |||||||||    
T  35125404 gtttcagataggtcctttaagtttctaaggtttcagatgggtcatttaagttt 35125456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 548 - 616
Target Start/End: Complemental strand, 35125610 - 35125542
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||   |||||||| ||||| |||||||| |||||||||||||||||||||| |||||||||    
T  35125610 tttaagtttcgagtttgtttcggataggtcctttaaatttctaaggtttcagataggtcttttaagttt 35125542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 548 - 616
Target Start/End: Original strand, 43671260 - 43671328
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||   |||||||| ||||| || |||||||||||||||||||||||||||| |||||||||    
T  43671260 tttaagtttcgagtttgtttcggataggtcttttaagtttctaaggtttcagataggtcttttaagttt 43671328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 561 - 616
Target Start/End: Original strand, 1038962 - 1039017
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||| ||||| || ||||||||| ||||||||||||||||||||||||||||    
T  1038962 tttgtttcggataggtcatttaagtttataaggtttcagataggtcctttaagttt 1039017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 561 - 616
Target Start/End: Complemental strand, 44436674 - 44436619
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||| ||||  |||||||||||||||| ||||||||||||||||||||||||    
T  44436674 tttgtttcggatatgtcctttaagtttctaaagtttcagataggtcctttaagttt 44436619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 543 - 613
Target Start/End: Complemental strand, 33953509 - 33953439
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaag 613  Q
    |||| ||||||||||   |||||||| ||||| ||||||||||||||||||||||||||| | ||||||||    
T  33953509 ggtcctttaagtttcgagtttgtttcggataggtcctttaagtttctaaggtttcagataagccctttaag 33953439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 543 - 616
Target Start/End: Complemental strand, 28182430 - 28182358
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||||||    |||||||||||||  ||||||||||||||||||||||||||| || ||||||||||    
T  28182430 ggtcttttaagtttggagtttgtttcagatatgtcctttaagtttctaaggtttcagata-gttctttaagttt 28182358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 548 - 616
Target Start/End: Complemental strand, 30851360 - 30851291
Alignment:
Q  548 tttaagtttcatatttgtttcaga-tagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||| |  ||||||||||| ||  |||||||| ||||||||||||||||||||||||||||||||    
T  30851360 tttaagtttaacgtttgtttcagaatatgtcctttaaatttctaaggtttcagataggtcctttaagttt 30851291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 543 - 616
Target Start/End: Original strand, 34334602 - 34334675
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| ||||||||||   |||||||  ||||  ||||||||||||||||||||||||||||||| |||||||||    
T  34334602 ggtcatttaagtttcgagtttgtttgggatatgtcctttaagtttctaaggtttcagataggtcatttaagttt 34334675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 543 - 612
Target Start/End: Complemental strand, 43671488 - 43671419
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaa 612  Q
    |||| ||||||||| |  ||||||||  |||| ||||||||||||||||||||||||||||||| |||||    
T  43671488 ggtcctttaagtttgaagtttgtttcgaataggtcctttaagtttctaaggtttcagataggtcatttaa 43671419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 564 - 616
Target Start/End: Original strand, 4603509 - 4603561
Alignment:
Q  564 gtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| |||||| |||||||| ||| ||||||||||||||||||||||||||||    
T  4603509 gttttagataggtcctttaaatttttaaggtttcagataggtcctttaagttt 4603561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 576 - 616
Target Start/End: Original strand, 7438306 - 7438346
Alignment:
Q  576 tcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  7438306 tcctttaagtttctaaagtttcagataggtcctttaagttt 7438346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 548 - 616
Target Start/End: Original strand, 7881634 - 7881702
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||  ||||||||| ||||  | ||||| ||||||||||||||||||| ||||||||||||    
T  7881634 tttaagtttcacgtttgtttcaaataggccttttaaatttctaaggtttcagatagatcctttaagttt 7881702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 561 - 621
Target Start/End: Complemental strand, 33616026 - 33615966
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttggaat 621  Q
    |||||||| ||||| ||||| || ||||||||||||||||||||| |||||||||| ||||    
T  33616026 tttgtttcggataggtccttaaaatttctaaggtttcagataggttctttaagtttcgaat 33615966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 576 - 612
Target Start/End: Complemental strand, 34334862 - 34334826
Alignment:
Q  576 tcctttaagtttctaaggtttcagataggtcctttaa 612  Q
    |||||||||||||||||||||||||||||||||||||    
T  34334862 tcctttaagtttctaaggtttcagataggtcctttaa 34334826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 548 - 616
Target Start/End: Original strand, 43671200 - 43671268
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||  ||||||||| |||| |||||||| ||| |||||||| |||||| ||||||||||||    
T  43671200 tttaagtttcacgtttgtttcaaataggtcctttaaatttttaaggttttagatagatcctttaagttt 43671268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 561 - 616
Target Start/End: Complemental strand, 5483159 - 5483104
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||| | |||| ||||||||||||||| ||||||| |||||||||||||||||    
T  5483159 tttgttttaaataggtcctttaagtttctacggtttcatataggtcctttaagttt 5483104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 561 - 616
Target Start/End: Original strand, 33615829 - 33615884
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||| ||||| |||||||| ||| |||||||||| |||||||||||||||||    
T  33615829 tttgtttcggataggtcctttaaatttttaaggtttcatataggtcctttaagttt 33615884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 561 - 616
Target Start/End: Complemental strand, 40343774 - 40343720
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||| |||||| | |||||||||||||||||||||||||||| ||||||||||    
T  40343774 tttgttttagataggtgctttaagtttctaaggtttcagataggt-ctttaagttt 40343720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 542 - 612
Target Start/End: Complemental strand, 11974257 - 11974187
Alignment:
Q  542 gggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaa 612  Q
    ||||| |||||||||||  |||||||||||||  || ||||||||| ||||||||||||||  ||||||||    
T  11974257 gggtcctttaagtttcacgtttgtttcagatatgtcttttaagtttataaggtttcagataaatcctttaa 11974187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 565 - 611
Target Start/End: Complemental strand, 30851283 - 30851237
Alignment:
Q  565 tttcagatagatcctttaagtttctaaggtttcagataggtccttta 611  Q
    |||| |||||||| |||||||||||||||||||||||||| ||||||    
T  30851283 tttcggatagatcatttaagtttctaaggtttcagataggaccttta 30851237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 548 - 614
Target Start/End: Complemental strand, 40343728 - 40343662
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagt 614  Q
    ||||||||||   |||||||| ||||| | ||||||||||||||||||| |||||| ||||||||||    
T  40343728 tttaagtttcgagtttgtttcggataggtgctttaagtttctaaggttttagatagatcctttaagt 40343662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 570 - 616
Target Start/End: Complemental strand, 42553705 - 42553659
Alignment:
Q  570 gatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| |||||||||||||||| ||||||||||| ||||||||||||    
T  42553705 gataggtcctttaagtttctaaagtttcagatagatcctttaagttt 42553659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 543 - 616
Target Start/End: Complemental strand, 1039177 - 1039104
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| ||||||||||   |||||||| ||||  |||||||||||||||||||| |||||| |||||||| ||||    
T  1039177 ggtcctttaagtttcgagtttgtttcggatatgtcctttaagtttctaaggttacagatatgtcctttatgttt 1039104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 543 - 612
Target Start/End: Original strand, 4603548 - 4603617
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaa 612  Q
    |||| ||||||||||   ||| |||| ||||| |||||||||||| ||||||||||||||||| ||||||    
T  4603548 ggtcctttaagtttcgagtttctttcggataggtcctttaagtttttaaggtttcagataggttctttaa 4603617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 579 - 616
Target Start/End: Original strand, 28182234 - 28182271
Alignment:
Q  579 tttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||||||||| |||||||||||||||||||    
T  28182234 tttaagtttctaaggttttagataggtcctttaagttt 28182271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 543 - 612
Target Start/End: Original strand, 33615751 - 33615820
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaa 612  Q
    |||| |||||||||||  ||| |||||||||  | ||||||||||||||||||||| |||| ||||||||    
T  33615751 ggtcctttaagtttcacgtttatttcagataagttctttaagtttctaaggtttcatatagatcctttaa 33615820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 564 - 616
Target Start/End: Complemental strand, 9144227 - 9144175
Alignment:
Q  564 gtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||| |||| || |||||||||||| ||||||||||||||||| |||||||    
T  9144227 gtttcaaataggtcttttaagtttctatggtttcagataggtcctctaagttt 9144175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 561 - 616
Target Start/End: Complemental strand, 36387491 - 36387435
Alignment:
Q  561 tttgtttcagatagatcctttaagtttct-aaggtttcagataggtcctttaagttt 616  Q
    |||||||||||||| |||||||||||||| ||| ||||||||| ||| |||||||||    
T  36387491 tttgtttcagataggtcctttaagtttctaaagatttcagatatgtcttttaagttt 36387435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 542 - 617
Target Start/End: Original strand, 28182137 - 28182211
Alignment:
Q  542 gggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttg 617  Q
    ||||| ||||||||| |  ||||||||| |||| || ||||| |||||||||||| ||||| ||||||||||||||    
T  28182137 gggtcctttaagttttacgtttgtttcaaataggtc-tttaaatttctaaggttttagatatgtcctttaagtttg 28182211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 548 - 603
Target Start/End: Original strand, 30823348 - 30823403
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagatag 603  Q
    |||||||||||| | || || |||||||||||| |||||| |||||||||||||||    
T  30823348 tttaagtttcatgtctgatttagatagatccttaaagtttttaaggtttcagatag 30823403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 579 - 616
Target Start/End: Complemental strand, 15786993 - 15786956
Alignment:
Q  579 tttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  15786993 tttaagtttctaaagttttagataggtcctttaagttt 15786956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 579 - 616
Target Start/End: Complemental strand, 34334799 - 34334762
Alignment:
Q  579 tttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||||||||| ||||| |||||||||||||    
T  34334799 tttaagtttctaaggttttagatatgtcctttaagttt 34334762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 579 - 616
Target Start/End: Complemental strand, 40343639 - 40343602
Alignment:
Q  579 tttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  40343639 tttaagtttctaaagtttcagatagttcctttaagttt 40343602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 543 - 588
Target Start/End: Complemental strand, 44436723 - 44436678
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttc 588  Q
    |||| ||||||||||| ||||||||||||||| ||||||| |||||    
T  44436723 ggtcctttaagtttcacatttgtttcagataggtcctttatgtttc 44436678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #87
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 564 - 616
Target Start/End: Original strand, 44436481 - 44436532
Alignment:
Q  564 gtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||  |||||||||||| |||||||||||||| || ||||||||||    
T  44436481 gtttcagataagtcctttaagtttttaaggtttcagatatgt-ctttaagttt 44436532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 548 - 619
Target Start/End: Original strand, 11733 - 11804
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttgga 619  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  11733 tttaagtttcatgtttgtttcagatagatcctttaagtttcgaaggtttcagataggtcctttaagtttgga 11804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 4e-27; HSPs: 93)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 543 - 617
Target Start/End: Complemental strand, 14336990 - 14336916
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttg 617  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  14336990 ggtcctttaagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcagatgggtcctttaagtttg 14336916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 548 - 612
Target Start/End: Original strand, 21956040 - 21956104
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaa 612  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21956040 tttaagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaa 21956104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 545 - 616
Target Start/End: Complemental strand, 55358625 - 55358554
Alignment:
Q  545 tcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  55358625 tcttttaagtttcacgtttgtttcagatagatcctttaagtttctaaggtttcagatatgtcctttaagttt 55358554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 531 - 613
Target Start/End: Complemental strand, 25154901 - 25154819
Alignment:
Q  531 aatacatcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaag 613  Q
    ||||| ||| |||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  25154901 aatacctccccgggtcctttaagtttcatgtttgtttcagatagatcttttaagtttctaaggtttcagacaggtcctttaag 25154819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 542 - 616
Target Start/End: Original strand, 34979491 - 34979565
Alignment:
Q  542 gggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| |||||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  34979491 gggtcctttaagtttcacgtttgtttcagataggtcctttaagtttctaaggtttcagataggtcctttaagttt 34979565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 548 - 617
Target Start/End: Original strand, 7632839 - 7632908
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttg 617  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  7632839 tttaagtttcatgtttatttcagatagatcctttaagtttctaaggtttcagataagtcctttaagtttg 7632908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 543 - 616
Target Start/End: Complemental strand, 15631736 - 15631663
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| |||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  15631736 ggtcctttaagtttcatgtttgtttcacatagatcctttaagtttttaaggtttcagataggtcctttaagttt 15631663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 543 - 616
Target Start/End: Complemental strand, 26554044 - 26553971
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  26554044 ggtcctttaagtttcatgtttatttcagatagatcctttaagtttctaaggtttcagttaggtcctttaagttt 26553971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 548 - 616
Target Start/End: Original strand, 13846613 - 13846681
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  13846613 tttaaggttcatgtttgtttcagatagatcctttaagtttctaaggtttcagataggtcttttaagttt 13846681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 548 - 616
Target Start/End: Complemental strand, 40289783 - 40289715
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  40289783 tttaagtttcatgtttgtttcagatagatcctttaagtttctaagatttcggataggtcctttaagttt 40289715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 548 - 614
Target Start/End: Complemental strand, 53856829 - 53856763
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagt 614  Q
    |||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  53856829 tttaagtttcacgtttgtttcagatagatcctttaagtttctaaagtttcagataggtcctttaagt 53856763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 531 - 616
Target Start/End: Complemental strand, 18598639 - 18598554
Alignment:
Q  531 aatacatcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| ||| |||||| |||||||||||  ||||||| |||||| |||| ||||||||||||||||||||||||||||||||||||    
T  18598639 aatacctccccgggtcctttaagtttcaagtttgttttagataggtcctctaagtttctaaggtttcagataggtcctttaagttt 18598554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 543 - 616
Target Start/End: Original strand, 20421133 - 20421206
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| ||||||||||   |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  20421133 ggtcctttaagtttcgagtttgtttcagataggtcctttaagtttctaaggtttcagataggtcctttaagttt 20421206  T

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Target: chr4; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 543 - 616
Target Start/End: Complemental strand, 41898423 - 41898350
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| |||||||||||  ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  41898423 ggtcctttaagtttcaagtttgtttcagatagatcatttaagtttctaaggtttcagatatgtcctttaagttt 41898350  T

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Target: chr4; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 548 - 616
Target Start/End: Complemental strand, 21956454 - 21956386
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||| |||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||    
T  21956454 tttaagtttcatgtttgtttcggataggtcctttaagtttttaaggtttcagataggtcctttaagttt 21956386  T

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Target: chr4; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 539 - 616
Target Start/End: Complemental strand, 25363656 - 25363577
Alignment:
Q  539 ctcgggtcttttaagtttcatatttgtttcagatagatc--ctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| || |||||||||||| |||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||    
T  25363656 ctcggatcctttaagtttcatgtttgtttcagatagatctcctttaagtttctaaggtttcagatagatcctttaagttt 25363577  T

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Target: chr4; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 548 - 619
Target Start/End: Complemental strand, 46430067 - 46429996
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttgga 619  Q
    ||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||  |||||||||||||||    
T  46430067 tttaaatttcatatttgttttagatagatcctttaagtttataaggtttcagataaatcctttaagtttgga 46429996  T

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Target: chr4; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 542 - 616
Target Start/End: Complemental strand, 14336931 - 14336857
Alignment:
Q  542 gggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| ||||||||| |  |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  14336931 gggtcctttaagtttgaagtttgtttcggataggtcctttaagtttctaaggtttcagataggtcctttaagttt 14336857  T

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Target: chr4; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 543 - 617
Target Start/End: Original strand, 32751120 - 32751194
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttg 617  Q
    |||| ||||| |||||| ||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  32751120 ggtcctttaaatttcatgtttgtttaagatagattctttaagtttctaaggtttcagataggtcatttaagtttg 32751194  T

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Target: chr4; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 546 - 619
Target Start/End: Complemental strand, 3253547 - 3253474
Alignment:
Q  546 cttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttgga 619  Q
    |||||||||||||| |||||||||| |||||||||||| ||||||| ||||||||||| |||||||| ||||||    
T  3253547 cttttaagtttcatgtttgtttcagttagatcctttaaatttctaatgtttcagatagatcctttaaatttgga 3253474  T

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Target: chr4; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 531 - 616
Target Start/End: Original strand, 5322501 - 5322586
Alignment:
Q  531 aatacatcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| ||| ||| || |||||||||||| ||||||| | ||||||||||||| ||||||||||| ||||||||||||||||||||    
T  5322501 aatacctccccggatcctttaagtttcatgtttgtttaaaatagatcctttaaatttctaaggttgcagataggtcctttaagttt 5322586  T

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Target: chr4; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 531 - 616
Target Start/End: Complemental strand, 29031713 - 29031628
Alignment:
Q  531 aatacatcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| |||||||||| ||||| |||||| ||||||||| ||||||||||||| ||||| |||||| ||||||||||||| |||||    
T  29031713 aatacctcctcgggtcctttaactttcatgtttgtttcaaatagatcctttaaatttctgaggttttagataggtccttttagttt 29031628  T

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Target: chr4; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 531 - 616
Target Start/End: Complemental strand, 29043833 - 29043748
Alignment:
Q  531 aatacatcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| |||||||||| ||||| |||||| ||||||||| ||||||||||||| ||||| |||||| ||||||||||||| |||||    
T  29043833 aatacctcctcgggtcctttaactttcatgtttgtttcaaatagatcctttaaatttctgaggttttagataggtccttttagttt 29043748  T

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Target: chr4; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 547 - 616
Target Start/End: Original strand, 41898194 - 41898263
Alignment:
Q  547 ttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||   |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  41898194 ttttaagtttcgagtttgtttcggatagatcctttaagtttctaaggtttcagatagatcctttaagttt 41898263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 548 - 616
Target Start/End: Complemental strand, 41898478 - 41898410
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| |||||| ||||||||| |||||| |||| ||||||||||||||||||||||||||||||||||    
T  41898478 tttaaatttcatgtttgtttcatatagattctttcagtttctaaggtttcagataggtcctttaagttt 41898410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 531 - 616
Target Start/End: Complemental strand, 32557430 - 32557347
Alignment:
Q  531 aatacatcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| || ||||||| |||||||||||| ||||||||||||||  | ||||||||| |||||||| |||||||||||||||||||    
T  32557430 aatacctcttcgggtcctttaagtttcatgtttgtttcagatag--catttaagtttataaggttttagataggtcctttaagttt 32557347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 531 - 605
Target Start/End: Original strand, 41898119 - 41898193
Alignment:
Q  531 aatacatcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggt 605  Q
    ||||| |||| ||||| |||||||||||  |||||||||||| | ||||||||||||||||||||||||||||||    
T  41898119 aatacctccttgggtcctttaagtttcacgtttgtttcagatgggtcctttaagtttctaaggtttcagataggt 41898193  T

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Target: chr4; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 543 - 617
Target Start/End: Original strand, 53856481 - 53856555
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttg 617  Q
    |||| |||||||||||| |||||||| |||| ||| |||||||||||||||||||||||| ||| ||||||||||    
T  53856481 ggtcctttaagtttcatgtttgtttcggataaatcttttaagtttctaaggtttcagatatgtcttttaagtttg 53856555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 543 - 616
Target Start/End: Original strand, 14336637 - 14336710
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| ||||||||| |  |||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||    
T  14336637 ggtcctttaagttttacgtttgtttcagataggtcctttaagtttttaaagtttcagataggtcctttaagttt 14336710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 543 - 616
Target Start/End: Original strand, 14336697 - 14336770
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| ||||||||||   |||||||| ||||| ||||||||||||||||||||||||||||||| |||||||||    
T  14336697 ggtcctttaagtttcgagtttgtttcggataggtcctttaagtttctaaggtttcagataggtcatttaagttt 14336770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 543 - 616
Target Start/End: Original strand, 15631335 - 15631408
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| |||||||||| | ||| |||||||||| |||||||| ||||||||||||||||||| ||||||||||||    
T  15631335 ggtcctttaagtttcctgtttatttcagataggtcctttaaatttctaaggtttcagatagatcctttaagttt 15631408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 543 - 616
Target Start/End: Complemental strand, 32751441 - 32751368
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| ||||||||| || |||||||||||||| || |||||||||||||||||| |||||| ||||||||||||    
T  32751441 ggtcctttaagttttatgtttgtttcagataggtcttttaagtttctaaggttttagatagctcctttaagttt 32751368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 543 - 616
Target Start/End: Original strand, 40998180 - 40998252
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| ||||||||||   |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  40998180 ggtcctttaagtttcgagtttgtttcagataggtcctttaagtt-ctaaggtttcagataggtcctttaagttt 40998252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 544 - 612
Target Start/End: Original strand, 32557128 - 32557196
Alignment:
Q  544 gtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaa 612  Q
    ||||||||| ||| |  |||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  32557128 gtcttttaaattttaagtttgtttcggatagatcctttaagtttctaaggtttcatataggtcctttaa 32557196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 548 - 616
Target Start/End: Complemental strand, 35779070 - 35779002
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||| |||||||  |||||||||||||||||| |||||||||||||| ||| |||||||||    
T  35779070 tttaagtttcatgtttgttttcgatagatcctttaagtttttaaggtttcagataagtcatttaagttt 35779002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 548 - 616
Target Start/End: Original strand, 40998125 - 40998193
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| |||||| ||||||| ||||||||| |||||||| |||| ||||||||||||||||||||||||    
T  40998125 tttaaatttcatgtttgttttagatagatcttttaagttactaaagtttcagataggtcctttaagttt 40998193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 548 - 612
Target Start/End: Complemental strand, 41511368 - 41511304
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaa 612  Q
    ||||||||| || ||| ||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  41511368 tttaagttttatgtttatttcagatagatcatttaagtttctaaagtttcagataggtcctttaa 41511304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 548 - 612
Target Start/End: Original strand, 50523137 - 50523201
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaa 612  Q
    ||||||||||   |||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  50523137 tttaagtttcgagtttgtttcggatagatcctttaagtttctaaggtttcagataagtcctttaa 50523201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 565 - 616
Target Start/End: Original strand, 21956118 - 21956169
Alignment:
Q  565 tttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  21956118 tttcggataggtcctttaagtttctaaggtttcagataggtcctttaagttt 21956169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 561 - 616
Target Start/End: Complemental strand, 53856756 - 53856701
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||    
T  53856756 tttgtttcggataggtcctttaaatttctaaggtttcagataggtcctttaagttt 53856701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 542 - 616
Target Start/End: Original strand, 29031276 - 29031350
Alignment:
Q  542 gggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| |||||||||||  ||||||| |||||  || |||||||||||||| |||||||||||||||||||||||    
T  29031276 gggtcctttaagtttcacgtttgttttagataagtcttttaagtttctaagatttcagataggtcctttaagttt 29031350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 542 - 616
Target Start/End: Original strand, 29043395 - 29043469
Alignment:
Q  542 gggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| |||||||||||  ||||||| |||||  || |||||||||||||| |||||||||||||||||||||||    
T  29043395 gggtcctttaagtttcacgtttgttttagataagtcttttaagtttctaagatttcagataggtcctttaagttt 29043469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 543 - 621
Target Start/End: Original strand, 34979552 - 34979630
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttggaat 621  Q
    |||| ||||||||||   ||||||||  |||  ||||||||||||||||||||||||||||||||||||||||| ||||    
T  34979552 ggtcctttaagtttcgagtttgtttcgaataagtcctttaagtttctaaggtttcagataggtcctttaagtttcgaat 34979630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 531 - 596
Target Start/End: Complemental strand, 9861026 - 9860961
Alignment:
Q  531 aatacatcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggttt 596  Q
    ||||||||||| |||| ||||| |||| | ||||||||||||||||| ||||||||||||||||||    
T  9861026 aatacatcctccggtcctttaaatttcttgtttgtttcagatagatcttttaagtttctaaggttt 9860961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 543 - 616
Target Start/End: Complemental strand, 15631676 - 15631603
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| ||||||||||   |||||||| ||||| ||||||||||||||||||||||| || ||||||||||||||    
T  15631676 ggtcctttaagtttcgagtttgtttcggataggtcctttaagtttctaaggtttcaaatgggtcctttaagttt 15631603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 543 - 616
Target Start/End: Complemental strand, 18598567 - 18598494
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| ||||||||||   |||||||| ||||| ||||||||||||| ||||||||||||| |||||||||||||    
T  18598567 ggtcctttaagtttcgagtttgtttcggataggtcctttaagtttcaaaggtttcagataagtcctttaagttt 18598494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 548 - 616
Target Start/End: Complemental strand, 13846836 - 13846768
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||   ||| |||| ||||| ||||||||||||||||||||| |||||||||||||||||||    
T  13846836 tttaagtttcgagtttatttcggataggtcctttaagtttctaaggttttagataggtcctttaagttt 13846768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 548 - 616
Target Start/End: Complemental strand, 13864168 - 13864100
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||| |  ||| |||| ||||| ||||||||||||||||||||| |||||||||||||||||||    
T  13864168 tttaagttttaagtttatttcggataggtcctttaagtttctaaggttttagataggtcctttaagttt 13864100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 552 - 612
Target Start/End: Original strand, 18598212 - 18598272
Alignment:
Q  552 agtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaa 612  Q
    |||||||  |||||||||||||| |||||||||||||||||||||||||||| || |||||    
T  18598212 agtttcaagtttgtttcagataggtcctttaagtttctaaggtttcagatagatcatttaa 18598272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 548 - 616
Target Start/End: Original strand, 20421078 - 20421146
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||| |  |||||||||||||| ||||||||||||||||  ||||| |||||||||||||||||    
T  20421078 tttaagtttaacgtttgtttcagataggtcctttaagtttctaaaatttcatataggtcctttaagttt 20421146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 564 - 612
Target Start/End: Original strand, 20421183 - 20421231
Alignment:
Q  564 gtttcagatagatcctttaagtttctaaggtttcagataggtcctttaa 612  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  20421183 gtttcagataggtcctttaagtttctaaggtttcagatgggtcctttaa 20421231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 576 - 616
Target Start/End: Complemental strand, 25363557 - 25363517
Alignment:
Q  576 tcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  25363557 tcctttaagtttctaaggtttcagataggtcctttaagttt 25363517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 548 - 616
Target Start/End: Complemental strand, 35779010 - 35778942
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||   |||||||||||||| |||||||| |||| ||||||||||||||||| |||||||||    
T  35779010 tttaagtttcgagtttgtttcagataggtcctttaaatttccaaggtttcagataggtcatttaagttt 35778942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 576 - 616
Target Start/End: Original strand, 53856574 - 53856614
Alignment:
Q  576 tcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  53856574 tcctttaagtttctaaggtttcagataggtcctttaagttt 53856614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 561 - 616
Target Start/End: Original strand, 6111882 - 6111937
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||| ||||| || |||||||||||||| |||||||||||||||||||||||    
T  6111882 tttgtttcggataggtcgtttaagtttctaagatttcagataggtcctttaagttt 6111937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 545 - 616
Target Start/End: Complemental strand, 7633126 - 7633056
Alignment:
Q  545 tcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||| |   |||||||| |||| ||||||||||||||||||||| |||||||||||||||||||    
T  7633126 tcttttaagttttacgattgtttca-ataggtcctttaagtttctaaggttttagataggtcctttaagttt 7633056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 561 - 612
Target Start/End: Original strand, 23159125 - 23159176
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaa 612  Q
    |||||||| |||||| |||||||||||||||||||||||||||||| |||||    
T  23159125 tttgtttcggatagaccctttaagtttctaaggtttcagataggtcttttaa 23159176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 561 - 616
Target Start/End: Original strand, 27389817 - 27389872
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||||| |||||||||||| |||| ||||||||| |||||||||||||    
T  27389817 tttgtttcagataggtcctttaagtttttaagatttcagataagtcctttaagttt 27389872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 561 - 616
Target Start/End: Complemental strand, 40289679 - 40289624
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||| ||||| |||||||||||||||||| |||| |||||||||||||||||    
T  40289679 tttgtttcggataggtcctttaagtttctaaggattcatataggtcctttaagttt 40289624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 546 - 616
Target Start/End: Complemental strand, 13870698 - 13870628
Alignment:
Q  546 cttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||| |  |||||||||  ||| || |||||||||||||||||||| |||||||||||||||||    
T  13870698 cttttaagttttacgtttgtttcatgtaggtcatttaagtttctaaggtttcatataggtcctttaagttt 13870628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 548 - 602
Target Start/End: Complemental strand, 32751376 - 32751322
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagata 602  Q
    ||||||||| |  |||||||||||||| |||||||||||||||||||||||||||    
T  32751376 tttaagtttaaagtttgtttcagataggtcctttaagtttctaaggtttcagata 32751322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 543 - 616
Target Start/End: Complemental strand, 6112097 - 6112024
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||||||    |||||||  ||||| || |||||||||||||||||||||||||||| |||||||||    
T  6112097 ggtcttttaagtttggagtttgttttggataggtcttttaagtttctaaggtttcagataggtcgtttaagttt 6112024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 531 - 619
Target Start/End: Complemental strand, 6112170 - 6112081
Alignment:
Q  531 aatacatcctcgggtcttttaagtttcatatttgttt-cagatagatcctttaagtttctaaggtttcagataggtcctttaagtttgga 619  Q
    ||||| ||| |||||| ||||||||||   ||||||| || || ||||||||||||||||||| ||| ||||||||| ||||||||||||    
T  6112170 aatacctccccgggtcctttaagtttcgagtttgttttcaaatggatcctttaagtttctaagcttttagataggtcttttaagtttgga 6112081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 544 - 617
Target Start/End: Original strand, 13858875 - 13858948
Alignment:
Q  544 gtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttg 617  Q
    ||||||||||||| || ||||||| ||||||||| ||||| ||| ||| |||||| ||||||| ||||||||||    
T  13858875 gtcttttaagttttatgtttgttttagatagatcttttaaatttttaaagtttcatataggtcttttaagtttg 13858948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 544 - 617
Target Start/End: Original strand, 13870381 - 13870453
Alignment:
Q  544 gtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttg 617  Q
    ||||||||| ||| || ||||||| |||||| |||||||| ||| |||||||| ||||||||||||||||||||    
T  13870381 gtcttttaatttt-atgtttgttttagatagttcctttaaatttttaaggtttaagataggtcctttaagtttg 13870453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 543 - 616
Target Start/End: Original strand, 14966098 - 14966171
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| |||||||||||  |||||||||||||| || ||||| |||||||||||||| ||| ||| |||||||||    
T  14966098 ggtcatttaagtttcacgtttgtttcagataggtcatttaaatttctaaggtttcaaatatgtcttttaagttt 14966171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 531 - 616
Target Start/End: Original strand, 50523060 - 50523145
Alignment:
Q  531 aatacatcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||| | |||| |||||||||||  ||||||| |||||| || |||||||||||| |||||| ||||| | ||||||||||    
T  50523060 aatacatccccaggtcctttaagtttcacgtttgttttagataggtcatttaagtttctatggtttcggatagattctttaagttt 50523145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 548 - 616
Target Start/End: Complemental strand, 14966454 - 14966386
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||   |||||||| ||||| |||||||||||||||| ||||| ||||| ||||||||||||    
T  14966454 tttaagtttcgagtttgtttcggataggtcctttaagtttctaaagtttcggatagatcctttaagttt 14966386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 548 - 616
Target Start/End: Complemental strand, 14966514 - 14966446
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| ||| || ||||||| ||||||||| |||||| ||||||||||| |||||||| ||||||||||    
T  14966514 tttaaattttatgtttgttttagatagatcgtttaaggttctaaggttttagataggttctttaagttt 14966446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 548 - 616
Target Start/End: Complemental strand, 40998515 - 40998447
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||  ||||||| |||||  | |||||||||| ||||||||||||||||| ||||||||||    
T  40998515 tttaagtttcacgtttgttttagatatgttctttaagtttataaggtttcagataggttctttaagttt 40998447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 548 - 616
Target Start/End: Original strand, 46429793 - 46429861
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||   ||||||||  ||| |||||||||||||||||||||||||||| |||||||| ||||    
T  46429793 tttaagtttcgagtttgtttcgaatatatcctttaagtttctaaggtttcagatatgtcctttaggttt 46429861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 564 - 616
Target Start/End: Complemental strand, 52851197 - 52851146
Alignment:
Q  564 gtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||| || |||||||||| |||||||||||||||||||||||||||    
T  52851197 gtttcagataggtc-tttaagtttccaaggtttcagataggtcctttaagttt 52851146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 561 - 616
Target Start/End: Complemental strand, 25154811 - 25154757
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||| ||||| ||||| |||||||||||||||||||||| ||||||||||||    
T  25154811 tttgtttcggataggtcctt-aagtttctaaggtttcagatagatcctttaagttt 25154757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 543 - 606
Target Start/End: Complemental strand, 26553984 - 26553921
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtc 606  Q
    |||| ||||||||||   |||||||| ||||| |||||||||||||||||||||||||| ||||    
T  26553984 ggtcctttaagtttcgagtttgtttcggataggtcctttaagtttctaaggtttcagatgggtc 26553921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 561 - 616
Target Start/End: Complemental strand, 27389996 - 27389941
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||| ||||| ||||||||||||||| |||||||||| |||||||| |||||    
T  27389996 tttgtttcggataggtcctttaagtttctagggtttcagattggtcctttcagttt 27389941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 561 - 616
Target Start/End: Complemental strand, 34508933 - 34508878
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||  |||| |||||||||||| |||||||||||||| |||||||||||||    
T  34508933 tttgtttcgaataggtcctttaagtttttaaggtttcagataagtcctttaagttt 34508878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 546 - 616
Target Start/End: Original strand, 46429731 - 46429801
Alignment:
Q  546 cttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||| |||||  |||||||||||||| || |||||||||||||||||| ||||| | | |||||||||    
T  46429731 cttttaaatttcacttttgtttcagataggtcatttaagtttctaaggttttagatatggcatttaagttt 46429801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 561 - 610
Target Start/End: Original strand, 5322591 - 5322640
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtccttt 610  Q
    |||||||  ||||| |||||||| ||||||||||||||||||||||||||    
T  5322591 tttgttttggataggtcctttaaatttctaaggtttcagataggtccttt 5322640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 543 - 616
Target Start/End: Original strand, 13858934 - 13859006
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||||| | |||||||||  || | ||||||||||||||||||||||||| || | ||||||||||    
T  13858934 ggtcttttaagtttga-atttgtttcgaatcggtcctttaagtttctaaggtttcagacagattctttaagttt 13859006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 543 - 616
Target Start/End: Original strand, 13870439 - 13870511
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| ||||||||| | |||||||||  |||| ||||||||||||||||||||||| ||| || ||||||||||    
T  13870439 ggtcctttaagtttga-atttgtttcgaataggtcctttaagtttctaaggtttcaaatatgttctttaagttt 13870511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 542 - 616
Target Start/End: Original strand, 25154565 - 25154641
Alignment:
Q  542 gggtcttttaagtttcatatttgtttcagatagatcctttaagtttcta--aggtttcagataggtcctttaagttt 616  Q
    ||||| |||||||||||  |||||||||||||| ||||||||||||| |    |||||||||| |||||||||||||    
T  25154565 gggtcctttaagtttcacgtttgtttcagataggtcctttaagtttcgagtttgtttcagatatgtcctttaagttt 25154641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 543 - 616
Target Start/End: Original strand, 25154597 - 25154670
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| ||||||||||   |||||||||||||  ||||||||||||||||||||| |||||| || |||| ||||    
T  25154597 ggtcctttaagtttcgagtttgtttcagatatgtcctttaagtttctaaggtttaagatagctcatttaggttt 25154670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 579 - 616
Target Start/End: Complemental strand, 29031605 - 29031568
Alignment:
Q  579 tttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||||||||||||||||||| |||||||||    
T  29031605 tttaagtttctaaggtttcagataggtcatttaagttt 29031568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 579 - 616
Target Start/End: Complemental strand, 29043725 - 29043688
Alignment:
Q  579 tttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||||||||||||||||||| |||||||||    
T  29043725 tttaagtttctaaggtttcagataggtcatttaagttt 29043688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 565 - 617
Target Start/End: Complemental strand, 27390052 - 27390000
Alignment:
Q  565 tttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttg 617  Q
    ||||||||||||| |||||||||||| ||||||||||| || |||||| ||||    
T  27390052 tttcagatagatcttttaagtttctatggtttcagataagttctttaaatttg 27390000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 561 - 616
Target Start/End: Complemental strand, 32557342 - 32557286
Alignment:
Q  561 tttgtttcagatagatccttt-aagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||| ||||| |||||| || ||||||||||||||| ||||||||||||||||    
T  32557342 tttgtttcggataggtccttttaaatttctaaggtttcagttaggtcctttaagttt 32557286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 548 - 616
Target Start/End: Original strand, 52850891 - 52850959
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||  |||||||  ||||  |||||||| |||| ||||||||||||| |||||||||||||    
T  52850891 tttaagtttcacgtttgttttggatatgtcctttaaatttcgaaggtttcagataagtcctttaagttt 52850959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 564 - 610
Target Start/End: Complemental strand, 13870651 - 13870605
Alignment:
Q  564 gtttcagatagatcctttaagtttctaaggtttcagataggtccttt 610  Q
    |||||| |||| ||||||||||||||||| |||||||||| ||||||    
T  13870651 gtttcatataggtcctttaagtttctaagatttcagatagatccttt 13870605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 542 - 588
Target Start/End: Original strand, 40289362 - 40289408
Alignment:
Q  542 gggtcttttaagtttcatatttgtttcagatagatcctttaagtttc 588  Q
    ||||| |||||||||||| |||||||||||||| | |||||||||||    
T  40289362 gggtcctttaagtttcatgtttgtttcagataggtactttaagtttc 40289408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 542 - 616
Target Start/End: Original strand, 23159042 - 23159120
Alignment:
Q  542 gggtcttttaagtttcatatttgtttcagatagatcctttaagtt----tctaaggtttcagataggtcctttaagttt 616  Q
    ||||| |||||||||| |  ||||||| ||||| || ||||||||    |||||||||||||||| |||||||||||||    
T  23159042 gggtcatttaagtttcgtgattgtttcggataggtcttttaagttaatttctaaggtttcagataagtcctttaagttt 23159120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 543 - 616
Target Start/End: Original strand, 32751180 - 32751252
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| ||||||||| |  |||||||| ||||| || ||||||| |||||| |||||||||| ||||||||||||    
T  32751180 ggtcatttaagtttgaagtttgtttcggataggtcttttaagtctctaag-tttcagatagatcctttaagttt 32751252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 571 - 616
Target Start/End: Complemental strand, 52851219 - 52851175
Alignment:
Q  571 atagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||| |||||||||||||| ||||||||||||| ||||||||||    
T  52851219 atagattctttaagtttctaaagtttcagataggt-ctttaagttt 52851175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 564 - 616
Target Start/End: Complemental strand, 55358557 - 55358505
Alignment:
Q  564 gtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| ||||| |||||||||||  |||| ||||||||| |||||||||||||    
T  55358557 gtttcggataggtcctttaagttgttaagatttcagatatgtcctttaagttt 55358505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 2e-26; HSPs: 77)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 531 - 616
Target Start/End: Original strand, 25147122 - 25147207
Alignment:
Q  531 aatacatcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| ||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||  |||||||||||||    
T  25147122 aatacctccccgggtcttttaagtttcatgtttgtttcagatagatcatttaagtttctaaggtttcagatgagtcctttaagttt 25147207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 548 - 617
Target Start/End: Complemental strand, 26997556 - 26997487
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttg 617  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26997556 tttaagttccatgtttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttg 26997487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 539 - 612
Target Start/End: Complemental strand, 48382334 - 48382261
Alignment:
Q  539 ctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaa 612  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||||||    
T  48382334 ctcgggtcttttaagtttcatatttgtttcagatagatcatttaagtttctaaggttttagataagtcctttaa 48382261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 531 - 619
Target Start/End: Original strand, 13657895 - 13657983
Alignment:
Q  531 aatacatcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttgga 619  Q
    ||||| ||| |||||  |||||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  13657895 aatacctccccgggtactttaagtttcatgtttgtttcagatagatcatttaagtttctaaggtttcagataagtcctttaagtttgga 13657983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 531 - 619
Target Start/End: Complemental strand, 50293937 - 50293849
Alignment:
Q  531 aatacatcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttgga 619  Q
    ||||| || ||||||| | ||||||| || ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  50293937 aatacctcttcgggtcctataagttttatgtttgtttcagatagatcctttaagtttttaaggtttcagataggtcctttaagtttgga 50293849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 541 - 619
Target Start/End: Original strand, 29777254 - 29777332
Alignment:
Q  541 cgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttgga 619  Q
    |||||| |||| |||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  29777254 cgggtcctttacgttttatgtttgtttcagatagatcctttaagtttctaaggtttcatataggtcctttaagtttgga 29777332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 531 - 617
Target Start/End: Complemental strand, 11871741 - 11871655
Alignment:
Q  531 aatacatcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttg 617  Q
    ||||| ||| |||||| | ||| ||| || ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  11871741 aatacctccccgggtcctataaattttatgtttgtttcagatagatcctttaagtttataaggtttcagataggtcctttaagtttg 11871655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 542 - 616
Target Start/End: Complemental strand, 13712398 - 13712324
Alignment:
Q  542 gggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| |||||||||||  |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  13712398 gggtcctttaagtttcacgtttgtttcagataggtcctttaagtttctaaggtttcagataggttctttaagttt 13712324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 542 - 616
Target Start/End: Original strand, 17579756 - 17579830
Alignment:
Q  542 gggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| |||||||||||| |||||||||||||| | |||||||||||||||||||||||||||| ||||||||||    
T  17579756 gggtcctttaagtttcatgtttgtttcagataggttctttaagtttctaaggtttcagataggtgctttaagttt 17579830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 550 - 616
Target Start/End: Original strand, 48517931 - 48517997
Alignment:
Q  550 taagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  48517931 taagtttcatgtttgttttagatagatcctttaagtttctaaggttttagataggtcctttaagttt 48517997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 531 - 616
Target Start/End: Original strand, 10820221 - 10820306
Alignment:
Q  531 aatacatcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| |||| || || |||||||||||  |||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  10820221 aatacctccttggatcctttaagtttcacgtttgtttcagatagatcctttaagtttctaaggtttcagatatgttctttaagttt 10820306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 548 - 617
Target Start/End: Complemental strand, 43122950 - 43122881
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttg 617  Q
    |||||||||||| ||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  43122950 tttaagtttcatgtttttttcagatagatcgtttaagtttctaaggtttcagataagtcctttaagtttg 43122881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 531 - 615
Target Start/End: Original strand, 13712032 - 13712116
Alignment:
Q  531 aatacatcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtt 615  Q
    ||||| ||| |||||| ||||||||| || ||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||    
T  13712032 aatacctccccgggtcctttaagttttatgtttgtttcagataaatcctttaagtttctaaagtttcaaataggtcctttaagtt 13712116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 548 - 615
Target Start/End: Complemental strand, 47220573 - 47220506
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtt 615  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||    
T  47220573 tttaagtttcatgtttgtttaagatagatcctttaagtttctaaggttttagatatgtcctttaagtt 47220506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 542 - 616
Target Start/End: Original strand, 11871406 - 11871480
Alignment:
Q  542 gggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| |||||||||||  | |||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  11871406 gggtcctttaagtttcacgtctgtttcagataggtcctttaagtttccaaggtttcagataggtcctttaagttt 11871480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 549 - 615
Target Start/End: Original strand, 37148194 - 37148260
Alignment:
Q  549 ttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtt 615  Q
    ||||||||||| |||||  ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  37148194 ttaagtttcatgtttgtaacagataggtcctttaagtttctaaggtttcagataggtcctttaagtt 37148260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 542 - 616
Target Start/End: Original strand, 43122602 - 43122676
Alignment:
Q  542 gggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| |||||||||||  ||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||    
T  43122602 gggtcctttaagtttcacgtttgtttcagatagaccctttaagtttttaaggtttcagataggccctttaagttt 43122676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 543 - 616
Target Start/End: Original strand, 7515411 - 7515484
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| |||||||||||  |||||||||||||| |||||||||||||||| |||||||||| |||||||||||||    
T  7515411 ggtcctttaagtttcacgtttgtttcagataggtcctttaagtttctaaagtttcagataagtcctttaagttt 7515484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 548 - 616
Target Start/End: Complemental strand, 11218449 - 11218381
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||| | | |||||||||||||    
T  11218449 tttaagtttcatgtttatttcagatagatcctttaagtttctaaggtttcaaacatgtcctttaagttt 11218381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 548 - 616
Target Start/End: Complemental strand, 52212021 - 52211953
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||   |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  52212021 tttaagtttcgagtttgtttcggataggtcctttaagtttctaaggtttcagataggtcctttaagttt 52211953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 541 - 616
Target Start/End: Complemental strand, 7515737 - 7515662
Alignment:
Q  541 cgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||| |||||  ||||||| | |||||| ||||||||||||||||||||||||| |||||||||||||    
T  7515737 cgggtcttttaaatttcacgtttgttttaaatagattctttaagtttctaaggtttcagatatgtcctttaagttt 7515662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 561 - 616
Target Start/End: Original strand, 31324206 - 31324261
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  31324206 tttgtttcggataggtcctttaagtttctaaggtttcagataggtcctttaagttt 31324261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 542 - 616
Target Start/End: Complemental strand, 1772056 - 1771983
Alignment:
Q  542 gggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| |||||||||||  ||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||    
T  1772056 gggtcctttaagtttcacgtttgtttcatataggtcctttaagtttctaaggtttcagata-gtcctttaagttt 1771983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 542 - 616
Target Start/End: Complemental strand, 13658262 - 13658188
Alignment:
Q  542 gggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| ||||| ||| || ||||||||| |||  |||||||||||||||||||||||||||||||||||||||||    
T  13658262 gggtcctttaaatttaatgtttgtttcatataagtcctttaagtttctaaggtttcagataggtcctttaagttt 13658188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 543 - 612
Target Start/End: Complemental strand, 11218363 - 11218294
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaa 612  Q
    |||| |||||||||||  |||||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  11218363 ggtcctttaagtttcaagtttgtttcagataagtcctttaagtttctaaggtttcagatagatcctttaa 11218294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 547 - 616
Target Start/End: Complemental strand, 17580094 - 17580025
Alignment:
Q  547 ttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||   ||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  17580094 ttttaagtttcgagtttatttcggatagattctttaagtttctaaggtttcagataggtcctttaagttt 17580025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 543 - 616
Target Start/End: Original strand, 26997209 - 26997282
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| |||||||||||| ||||||||| |||| ||||||||||||||| ||||| ||||| |||||||||||||    
T  26997209 ggtcctttaagtttcatgtttgtttcaaataggtcctttaagtttctagggtttaagatatgtcctttaagttt 26997282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 11218073 - 11218137
Alignment:
Q  542 gggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtc 606  Q
    ||||| ||||||||| || |||||||||||||| ||||||||||||||||||||| |||||||||    
T  11218073 gggtcatttaagttttatgtttgtttcagataggtcctttaagtttctaaggttttagataggtc 11218137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 548 - 616
Target Start/End: Complemental strand, 13712332 - 13712264
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||   |||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||    
T  13712332 tttaagtttcgagtttgtttcggataggtcctttaagtttttaaggtttcagataggtcctttaagttt 13712264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 548 - 616
Target Start/End: Complemental strand, 33623443 - 33623375
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||  | ||||| |||||| |||||||||||||||||||||||||||| ||||||||||||    
T  33623443 tttaagtttcacgtctgttttagataggtcctttaagtttctaaggtttcagatagatcctttaagttt 33623375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 561 - 616
Target Start/End: Original strand, 7515489 - 7515544
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||    
T  7515489 tttgtttcggataggtcctttaagtttctaaggtttcggataggtcctttaagttt 7515544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 565 - 616
Target Start/End: Original strand, 24097998 - 24098049
Alignment:
Q  565 tttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  24097998 tttcggataggtcctttaagtttctaaggtttcagataggtcctttaagttt 24098049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 561 - 616
Target Start/End: Original strand, 29777334 - 29777389
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||||| ||||    
T  29777334 tttgtttcggataggtcctttaagtttctaaggtttcagataggtcctttatgttt 29777389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 561 - 616
Target Start/End: Original strand, 33623173 - 33623228
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||  |||| |||||||||||||||||||||||||||||||||||||||||    
T  33623173 tttgtttcgaataggtcctttaagtttctaaggtttcagataggtcctttaagttt 33623228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 561 - 616
Target Start/End: Complemental strand, 43122877 - 43122822
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||| ||||| || ||||||||||||||||||||||||||||||||||||||    
T  43122877 tttgtttcggataggtcatttaagtttctaaggtttcagataggtcctttaagttt 43122822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 541 - 616
Target Start/End: Complemental strand, 52212088 - 52212013
Alignment:
Q  541 cgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||| |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||  ||| |||||||||    
T  52212088 cgggtcatttaagtttcatgtttgtctgggatagatcctttaagtttctaaggtttcagatgagtcatttaagttt 52212013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 548 - 617
Target Start/End: Original strand, 33623099 - 33623169
Alignment:
Q  548 tttaagtttcatatttgttt-cagatagatcctttaagtttctaaggtttcagataggtcctttaagtttg 617  Q
    |||||||||||| ||| ||| |||||| |||||||||||||||||||||||||||||||| |||| |||||    
T  33623099 tttaagtttcatgttttttttcagataaatcctttaagtttctaaggtttcagataggtcttttacgtttg 33623169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 543 - 616
Target Start/End: Complemental strand, 10820526 - 10820453
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| ||||||||| |  |||||||  ||||| ||||||||||||||||||||||||||| |||||||||||||    
T  10820526 ggtcctttaagtttgaagtttgttttggataggtcctttaagtttctaaggtttcagataagtcctttaagttt 10820453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 543 - 616
Target Start/End: Original strand, 11871467 - 11871540
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| ||||||||||   ||||||||  |||| ||||||||||||||||||||||||||||||| |||||||||    
T  11871467 ggtcctttaagtttcgagtttgtttcgtataggtcctttaagtttctaaggtttcagataggtcttttaagttt 11871540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 561 - 610
Target Start/End: Original strand, 13657985 - 13658034
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtccttt 610  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  13657985 tttgtttcagataggtcctttaggtttctaaggtttcagataggtccttt 13658034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 543 - 616
Target Start/End: Complemental strand, 26997501 - 26997428
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| ||||||||| || |||||||  ||||| ||||||||||||||||||||||| ||||||| |||||||||    
T  26997501 ggtcctttaagtttgatgtttgttttggataggtcctttaagtttctaaggtttcaaataggtcatttaagttt 26997428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 543 - 616
Target Start/End: Complemental strand, 29777549 - 29777476
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| ||||||||||   |||||||| |||| |||||||||||||||||||||| ||||||||| |||||||||    
T  29777549 ggtcatttaagtttcgagtttgtttcggatatatcctttaagtttctaaggttttagataggtcatttaagttt 29777476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 598
Target Start/End: Original strand, 3750609 - 3750665
Alignment:
Q  542 gggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttca 598  Q
    ||||| |||||||||||  |||||||||||||| |||||||||||||||||||||||    
T  3750609 gggtcctttaagtttcacgtttgtttcagataggtcctttaagtttctaaggtttca 3750665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 568 - 616
Target Start/End: Complemental strand, 3750949 - 3750901
Alignment:
Q  568 cagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  3750949 cagataggtcctttaagtttctaaggtttcagataagtcctttaagttt 3750901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 548 - 616
Target Start/End: Original strand, 10820298 - 10820366
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||   |||||||| ||||| || ||||||||||||||||||||||||||| ||||||||||    
T  10820298 tttaagtttcgagtttgtttcggataggtcttttaagtttctaaggtttcagataggttctttaagttt 10820366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 576 - 616
Target Start/End: Complemental strand, 24098176 - 24098136
Alignment:
Q  576 tcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  24098176 tcctttaagtttctaaggtttcagataggtcctttaagttt 24098136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 549 - 616
Target Start/End: Complemental strand, 8112896 - 8112829
Alignment:
Q  549 ttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||  ||||||| |||||| |||||||| |||||||||||||||||| |||||| ||||||    
T  8112896 ttaagtttcacgtttgttttagataggtcctttaaatttctaaggtttcagataagtccttaaagttt 8112829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 561 - 616
Target Start/End: Original strand, 13712122 - 13712177
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||  |||| |||||||||||||||||||||||||||| ||||||||||||    
T  13712122 tttgtttcgaataggtcctttaagtttctaaggtttcagatagatcctttaagttt 13712177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 576 - 619
Target Start/End: Original strand, 24097949 - 24097992
Alignment:
Q  576 tcctttaagtttctaaggtttcagataggtcctttaagtttgga 619  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  24097949 tcctttaagtttctaaggtttcagataagtcctttaagtttgga 24097992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 561 - 616
Target Start/End: Complemental strand, 25147487 - 25147432
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||||| |||||||||||| |||| ||||||||||||| |||||||||    
T  25147487 tttgtttcagataggtcctttaagtttttaagatttcagataggtcttttaagttt 25147432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 561 - 616
Target Start/End: Complemental strand, 47220500 - 47220445
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||| ||| | ||||||||||||||||| |||||||||||||||||||||||    
T  47220500 tttgtttcggattggtcctttaagtttctaagatttcagataggtcctttaagttt 47220445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 545 - 616
Target Start/End: Original strand, 48381909 - 48381979
Alignment:
Q  545 tcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||||||  |||||||||||||||||| |||||||| |||||||| |||||| || |||||||||    
T  48381909 tcttttaagtttcacgtttgtttcagatagatcc-ttaagtttttaaggttttagatagatcatttaagttt 48381979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 577 - 616
Target Start/End: Complemental strand, 50293831 - 50293792
Alignment:
Q  577 cctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  50293831 cctttaagtttctaaggtttcagataggtcctttaagttt 50293792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 546 - 612
Target Start/End: Complemental strand, 48518344 - 48518278
Alignment:
Q  546 cttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaa 612  Q
    |||||||||||||  |||||||||||||  | |||||||||| |||||||||||||| |||||||||    
T  48518344 cttttaagtttcacgtttgtttcagataagttctttaagtttttaaggtttcagatatgtcctttaa 48518278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 547 - 616
Target Start/End: Original strand, 8112543 - 8112612
Alignment:
Q  547 ttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||||| ||||||| ||||||||| ||||||||| |||||||| |||| ||  ||||||||||    
T  8112543 ttttaagtttcatgtttgttttagatagatcatttaagtttttaaggttttagattggatctttaagttt 8112612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 576 - 616
Target Start/End: Complemental strand, 3750970 - 3750930
Alignment:
Q  576 tcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  3750970 tcctttaagtttctaaggttgcagataggtcctttaagttt 3750930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 548 - 616
Target Start/End: Complemental strand, 24098264 - 24098196
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||| || ||||||||| ||||  || |||||||||||||||||||||||||||| ||| |||||    
T  24098264 tttaagttgcaaatttgtttcggatatgtcatttaagtttctaaggtttcagataggtcatttcagttt 24098196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 542 - 602
Target Start/End: Complemental strand, 24098332 - 24098272
Alignment:
Q  542 gggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagata 602  Q
    ||||| |||||||||||  |||||||||||||| |||||||||||||||| |||| |||||    
T  24098332 gggtcctttaagtttcacgtttgtttcagataggtcctttaagtttctaaagttttagata 24098272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 548 - 616
Target Start/End: Complemental strand, 33623383 - 33623315
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||   |||||||| ||||  ||||||||||||||||| ||||||||||||| |||||||||    
T  33623383 tttaagtttcgagtttgtttcggatatgtcctttaagtttctaagatttcagataggtcatttaagttt 33623315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 548 - 616
Target Start/End: Original strand, 43122668 - 43122736
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||   |||||||| ||||  | ||||||||||||||| |||||||||||||||||||||||    
T  43122668 tttaagtttcgagtttgtttcggatatgttctttaagtttctaagatttcagataggtcctttaagttt 43122736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 561 - 616
Target Start/End: Original strand, 11218148 - 11218203
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||| |||| ||||||||||||||||||||||| |||| ||| |||||||||    
T  11218148 tttgtttcggataaatcctttaagtttctaaggtttcggataagtcatttaagttt 11218203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 543 - 610
Target Start/End: Complemental strand, 11871669 - 11871602
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtccttt 610  Q
    |||| ||||||||| |  |||||||| ||||  |||||||||||||||| ||||||||||||||||||    
T  11871669 ggtcctttaagtttgaagtttgtttcggataactcctttaagtttctaaagtttcagataggtccttt 11871602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 561 - 616
Target Start/End: Complemental strand, 29231123 - 29231068
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||||||||| | |||||||||||||| |||||||||||||| |||| ||||    
T  29231123 tttgtttcagataggttctttaagtttctaaagtttcagataggtcatttatgttt 29231068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 548 - 615
Target Start/End: Complemental strand, 37148679 - 37148613
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtt 615  Q
    |||||||||||  |||||  ||| ||||||||||||||||||||||||||| |||||| |||||||||    
T  37148679 tttaagtttcacgtttgtaacagttagatcctttaagtttctaaggtttcatataggt-ctttaagtt 37148613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 561 - 616
Target Start/End: Original strand, 47220317 - 47220372
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||| ||||| |||||||||||| |||||||| ||||||||| |||||||||    
T  47220317 tttgtttcggataggtcctttaagtttttaaggttttagataggtcttttaagttt 47220372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 574 - 616
Target Start/End: Original strand, 31324159 - 31324201
Alignment:
Q  574 gatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||||||||||||||| ||||||||| |||||||||    
T  31324159 gatcctttaagtttctaaggttttagataggtcatttaagttt 31324201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 548 - 616
Target Start/End: Complemental strand, 11218389 - 11218319
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaag---gtttcagataggtcctttaagttt 616  Q
    |||||||||||  |||||||||||||| ||||||||||||| |||   |||||||||| |||||||||||||    
T  11218389 tttaagtttcaagtttgtttcagataggtcctttaagtttc-aagtttgtttcagataagtcctttaagttt 11218319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 543 - 616
Target Start/End: Complemental strand, 13658201 - 13658128
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| ||||||||||   |||||||| ||||  ||||||||| || | ||||||||||||||||||||||||||    
T  13658201 ggtcctttaagtttcgagtttgtttcggataagtcctttaagatttttaggtttcagataggtcctttaagttt 13658128  T

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Target: chr3; HSP #69
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 543 - 616
Target Start/End: Original strand, 48517984 - 48518056
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| ||||||||||   |||||||| ||||| |||||||| ||||||||||||||||||| | ||||||||||    
T  48517984 ggtcctttaagtttcgagtttgtttcggataggtcctttaaatttctaaggtttcagatagct-ctttaagttt 48518056  T

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Target: chr3; HSP #70
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 579 - 616
Target Start/End: Complemental strand, 54924139 - 54924102
Alignment:
Q  579 tttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  54924139 tttaagtttctaaggtttcagataggttctttaagttt 54924102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 539 - 587
Target Start/End: Complemental strand, 10820561 - 10820513
Alignment:
Q  539 ctcgggtcttttaagtttcatatttgtttcagatagatcctttaagttt 587  Q
    ||||| || |||||||||||| |||||||||||||| ||||||||||||    
T  10820561 ctcggatcctttaagtttcatgtttgtttcagataggtcctttaagttt 10820513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 545 - 605
Target Start/End: Complemental strand, 29231195 - 29231137
Alignment:
Q  545 tcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggt 605  Q
    ||||||||||||||| |||||| |||||||||  ||||||||||||| |||||||||||||    
T  29231195 tcttttaagtttcatgtttgtt-cagatagatt-tttaagtttctaatgtttcagataggt 29231137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 548 - 606
Target Start/End: Original strand, 26997274 - 26997332
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtc 606  Q
    ||||||||||   |||||||| ||||  ||||||||||||||||||||| |||||||||    
T  26997274 tttaagtttcgagtttgtttcggatatgtcctttaagtttctaaggttttagataggtc 26997332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 616
Target Start/End: Complemental strand, 17580170 - 17580085
Alignment:
Q  531 aatacatcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| ||| ||| || ||||| ||| || ||||||| ||||||||  |||||||||||||||||| ||||| ||  |||||||||    
T  17580170 aatacctccccggatcctttaaattttatgtttgttttagatagattttttaagtttctaaggttttagataagttttttaagttt 17580085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 543 - 587
Target Start/End: Complemental strand, 31324522 - 31324478
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagttt 587  Q
    |||| |||||||||||  |||||||||||||| ||||||||||||    
T  31324522 ggtcctttaagtttcacgtttgtttcagataggtcctttaagttt 31324478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 561 - 613
Target Start/End: Original strand, 49122819 - 49122870
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaag 613  Q
    |||||||||||||| |||||||||||||||| |||| || || ||||||||||    
T  49122819 tttgtttcagataggtcctttaagtttctaa-gttttagttaagtcctttaag 49122870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 616
Target Start/End: Complemental strand, 54924110 - 54924042
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||   ||||||||  |||||| |||||| ||| ||||||||||||||| ||||| ||||||    
T  54924110 tttaagtttcgagtttgtttcgaatagattctttaaatttataaggtttcagatagttccttcaagttt 54924042  T

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Target: scaffold0182 (Bit Score: 58; Significance: 4e-24; HSPs: 3)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 542 - 619
Target Start/End: Original strand, 22208 - 22285
Alignment:
Q  542 gggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttgga 619  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||| ||||    
T  22208 gggtcctttaagtttcatatttgtttcagatagatcctttaagtttctaagtcttcagatagttcctttaagtatgga 22285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 531 - 619
Target Start/End: Complemental strand, 23505 - 23417
Alignment:
Q  531 aatacatcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttgga 619  Q
    ||||| ||| |||||| ||||||||||   ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  23505 aatacctccccgggtcctttaagtttcgagtttgtttcaaatagatcctttaagtttctaagatttcagataggtcctttaagtttgga 23417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 542 - 616
Target Start/End: Complemental strand, 22534 - 22460
Alignment:
Q  542 gggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||||||| |  |||||||||||||| |||||||| ||||||| ||||||||||| | ||||||||||    
T  22534 gggtcttttaagtttaacgtttgtttcagataggtcctttaaatttctaaagtttcagatagattctttaagttt 22460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 57; Significance: 2e-23; HSPs: 4)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 531 - 619
Target Start/End: Complemental strand, 60826 - 60738
Alignment:
Q  531 aatacatcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttgga 619  Q
    ||||| |||| | ||| ||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||    
T  60826 aatacctccttgagtcctttaagttttatatttgtttcagatagatcatttaagtttctaaggtttcggataggtcctttatgtttgga 60738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 542 - 616
Target Start/End: Original strand, 60485 - 60559
Alignment:
Q  542 gggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| |||||||||||  |||||||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  60485 gggtcctttaagtttcacgtttgtttcagataggtactttaagtttctaaggtttcagataggtcctttaagttt 60559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #3
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 543 - 616
Target Start/End: Original strand, 60546 - 60619
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| ||||||||||   ||||||||  |||  ||||||||| |||||||||||||||||||||||||| ||||    
T  60546 ggtcctttaagtttcgagtttgtttcgaatatgtcctttaagattctaaggtttcagataggtcctttatgttt 60619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 561 - 616
Target Start/End: Complemental strand, 60736 - 60681
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||| |||  ||||||||||||||||||| || |||| |||||||||||||    
T  60736 tttgtttcaaataagtcctttaagtttctaaggtctcggatatgtcctttaagttt 60681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 51; Significance: 6e-20; HSPs: 4)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 542 - 616
Target Start/End: Complemental strand, 24020 - 23946
Alignment:
Q  542 gggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| |||||||||||  ||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||    
T  24020 gggtcatttaagtttcacgtttgtttcagatagatcctttaaatttctaaggtttcagatagatcctttcagttt 23946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 548 - 612
Target Start/End: Original strand, 23671 - 23735
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaa 612  Q
    |||||||||||| ||||||| ||||||||| ||||||||| |||||||||||||| ||| |||||    
T  23671 tttaagtttcatgtttgttttagatagatcatttaagtttttaaggtttcagataagtcatttaa 23735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 552 - 616
Target Start/End: Complemental strand, 23950 - 23886
Alignment:
Q  552 agtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||  |||||||| ||||| | |||||||||| ||||||||||||||||||||||||||||    
T  23950 agtttcaagtttgtttcggataggttctttaagtttttaaggtttcagataggtcctttaagttt 23886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 561 - 616
Target Start/End: Original strand, 23744 - 23799
Alignment:
Q  561 tttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||||||| ||||| |||||||| ||||| |||||||||||| ||| |||||||||    
T  23744 tttgtttcggataggtcctttaaatttctcaggtttcagatatgtcatttaagttt 23799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 46; Significance: 6e-17; HSPs: 3)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 543 - 616
Target Start/End: Original strand, 21827 - 21900
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    |||| |||||||||||  |||||||| ||||| ||||||||||||||| ||||||||||||||| |||||||||    
T  21827 ggtcctttaagtttcacgtttgtttcggataggtcctttaagtttctacggtttcagataggtcatttaagttt 21900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 531 - 616
Target Start/End: Complemental strand, 22152 - 22067
Alignment:
Q  531 aatacatcctcgggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||| ||| |||||| |||||||||||| ||| | | |||| || ||||||||||||||| |||||||||||||| |||||||||    
T  22152 aatacctccccgggtcctttaagtttcatgtttatcttagattgaccctttaagtttctaaagtttcagataggtcatttaagttt 22067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 543 - 612
Target Start/End: Complemental strand, 22080 - 22011
Alignment:
Q  543 ggtcttttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaa 612  Q
    |||| ||||||||||   ||||||||  |||| |||||||||||||||||||||||||||| ||||||||    
T  22080 ggtcatttaagtttcgagtttgtttcgtataggtcctttaagtttctaaggtttcagatagatcctttaa 22011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 548 - 616
Target Start/End: Original strand, 32255 - 32323
Alignment:
Q  548 tttaagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagttt 616  Q
    ||||||||||   ||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  32255 tttaagtttcgagtttctttcagataggtcctttaagtttctaaggtttcagataagtcctttaagttt 32323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 553 - 617
Target Start/End: Complemental strand, 32502 - 32439
Alignment:
Q  553 gtttcatatttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttg 617  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||    
T  32502 gtttcatgtttgtttcagatagatc-tttaagtttctaaggtttcagatatgtcatttaagtttg 32439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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