View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0299Ase11 (Length: 567)

Name: NF0299Ase11
Description: NF0299
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0299Ase11
NF0299Ase11
[»] chr7 (29 HSPs)
chr7 (11-563)||(9769345-9769899)
chr7 (117-322)||(2751271-2751480)
chr7 (111-322)||(21574088-21574304)
chr7 (112-322)||(11997849-11998063)
chr7 (122-266)||(654702-654848)
chr7 (117-322)||(40542902-40543111)
chr7 (210-322)||(23330827-23330940)
chr7 (125-283)||(7262257-7262416)
chr7 (117-320)||(22119890-22120097)
chr7 (117-322)||(2344299-2344508)
chr7 (125-322)||(7275277-7275478)
chr7 (117-321)||(21835152-21835360)
chr7 (147-261)||(35476403-35476520)
chr7 (144-284)||(47541423-47541565)
chr7 (122-322)||(7175859-7176063)
chr7 (187-322)||(21217897-21218034)
chr7 (122-313)||(9717984-9718179)
chr7 (111-240)||(23092179-23092311)
chr7 (228-314)||(22696328-22696415)
chr7 (252-321)||(12211665-12211735)
chr7 (245-320)||(3950911-3950988)
chr7 (125-178)||(47381039-47381091)
chr7 (223-320)||(3951091-3951190)
chr7 (150-322)||(17212053-17212229)
chr7 (163-322)||(2103055-2103218)
chr7 (117-191)||(16374128-16374203)
chr7 (150-305)||(22703503-22703662)
chr7 (235-300)||(29385727-29385794)
chr7 (141-216)||(39145668-39145744)
[»] chr2 (20 HSPs)
chr2 (109-322)||(8192336-8192552)
chr2 (117-322)||(44946045-44946254)
chr2 (163-284)||(18708512-18708636)
chr2 (111-322)||(15037955-15038170)
chr2 (111-322)||(33827559-33827774)
chr2 (125-322)||(30466830-30467031)
chr2 (125-178)||(44610183-44610236)
chr2 (141-201)||(12543263-12543324)
chr2 (111-240)||(35171879-35172011)
chr2 (210-281)||(30943134-30943205)
chr2 (213-306)||(19605936-19606030)
chr2 (150-305)||(10582017-10582174)
chr2 (210-279)||(29698187-29698256)
chr2 (212-284)||(40591218-40591290)
chr2 (122-178)||(14486969-14487025)
chr2 (163-266)||(41314045-41314150)
chr2 (252-314)||(4618815-4618878)
chr2 (218-270)||(10324944-10324996)
chr2 (234-320)||(18691980-18692067)
chr2 (125-180)||(44929846-44929901)
[»] chr3 (21 HSPs)
chr3 (117-322)||(40133441-40133650)
chr3 (117-322)||(53424169-53424377)
chr3 (111-322)||(46576344-46576559)
chr3 (122-322)||(8456147-8456351)
chr3 (111-322)||(25289701-25289915)
chr3 (111-322)||(48977384-48977599)
chr3 (143-322)||(4252414-4252597)
chr3 (125-322)||(35492907-35493108)
chr3 (112-266)||(51532842-51532999)
chr3 (111-264)||(10190728-10190884)
chr3 (110-314)||(15566485-15566692)
chr3 (109-322)||(30807137-30807354)
chr3 (109-308)||(53233895-53234097)
chr3 (209-314)||(19857056-19857162)
chr3 (111-264)||(10083805-10083961)
chr3 (143-284)||(26158853-26158990)
chr3 (111-322)||(45529741-45529955)
chr3 (117-322)||(30257620-30257829)
chr3 (222-284)||(40777055-40777117)
chr3 (218-313)||(55371381-55371477)
chr3 (163-322)||(45272454-45272617)
[»] chr1 (19 HSPs)
chr1 (112-322)||(32729541-32729754)
chr1 (109-266)||(8254736-8254896)
chr1 (117-322)||(15059394-15059603)
chr1 (125-322)||(1486416-1486617)
chr1 (163-322)||(8077643-8077806)
chr1 (117-322)||(4621229-4621438)
chr1 (150-322)||(24674389-24674565)
chr1 (213-284)||(10059090-10059161)
chr1 (117-314)||(7766719-7766920)
chr1 (187-322)||(27454930-27455067)
chr1 (112-322)||(40802056-40802268)
chr1 (233-320)||(26608180-26608267)
chr1 (163-322)||(1378894-1379056)
chr1 (210-284)||(20907349-20907423)
chr1 (210-322)||(1138575-1138688)
chr1 (227-284)||(39964547-39964604)
chr1 (223-322)||(7197347-7197447)
chr1 (214-271)||(40397365-40397422)
chr1 (144-240)||(1095023-1095121)
[»] chr4 (30 HSPs)
chr4 (111-322)||(40058838-40059053)
chr4 (117-320)||(45787696-45787902)
chr4 (147-319)||(9646238-9646414)
chr4 (108-322)||(34844741-34844959)
chr4 (111-322)||(54127328-54127543)
chr4 (112-322)||(19660519-19660733)
chr4 (111-322)||(5609188-5609403)
chr4 (126-322)||(52983615-52983815)
chr4 (112-322)||(25852210-25852425)
chr4 (117-226)||(22488020-22488131)
chr4 (192-246)||(39288932-39288986)
chr4 (122-313)||(13584251-13584446)
chr4 (111-322)||(32986193-32986408)
chr4 (249-284)||(4686126-4686161)
chr4 (229-284)||(48896537-48896592)
chr4 (187-265)||(18875580-18875659)
chr4 (111-266)||(32990488-32990646)
chr4 (227-320)||(34835527-34835621)
chr4 (112-178)||(44343658-44343724)
chr4 (125-178)||(7093515-7093568)
chr4 (218-302)||(13017745-13017830)
chr4 (229-275)||(19747208-19747254)
chr4 (229-275)||(19792552-19792598)
chr4 (141-265)||(47464124-47464250)
chr4 (111-314)||(27528781-27528988)
chr4 (204-322)||(33696360-33696480)
chr4 (227-279)||(45692202-45692253)
chr4 (187-266)||(9517705-9517785)
chr4 (249-284)||(25414213-25414248)
chr4 (141-240)||(25969519-25969618)
[»] chr8 (29 HSPs)
chr8 (204-322)||(26168930-26169049)
chr8 (111-322)||(34237641-34237856)
chr8 (141-321)||(34639224-34639406)
chr8 (117-322)||(3734615-3734824)
chr8 (187-314)||(41070769-41070898)
chr8 (117-322)||(20305908-20306117)
chr8 (117-322)||(21092541-21092750)
chr8 (117-319)||(24018385-24018592)
chr8 (117-322)||(4718645-4718854)
chr8 (111-322)||(19542533-19542749)
chr8 (111-322)||(19589947-19590163)
chr8 (112-322)||(19471609-19471824)
chr8 (111-322)||(2618186-2618401)
chr8 (210-312)||(28908831-28908936)
chr8 (117-322)||(42328005-42328213)
chr8 (204-321)||(27746416-27746535)
chr8 (111-239)||(33746966-33747097)
chr8 (117-322)||(39349256-39349465)
chr8 (210-318)||(35653425-35653534)
chr8 (125-266)||(6953008-6953151)
chr8 (227-322)||(18532107-18532203)
chr8 (210-313)||(33585715-33585819)
chr8 (235-286)||(1372514-1372565)
chr8 (249-284)||(6530849-6530884)
chr8 (150-213)||(7557976-7558040)
chr8 (187-301)||(13749077-13749192)
chr8 (125-311)||(21603241-21603431)
chr8 (122-177)||(26261933-26261988)
chr8 (249-284)||(40136961-40136996)
[»] chr5 (21 HSPs)
chr5 (111-322)||(32059426-32059641)
chr5 (111-321)||(8484647-8484861)
chr5 (125-226)||(5049231-5049333)
chr5 (111-322)||(31287932-31288147)
chr5 (125-323)||(19145412-19145613)
chr5 (117-322)||(27498723-27498932)
chr5 (125-321)||(930486-930685)
chr5 (122-266)||(38684261-38684407)
chr5 (111-321)||(4603774-4603988)
chr5 (150-322)||(11464933-11465108)
chr5 (111-266)||(18207260-18207418)
chr5 (111-240)||(19456197-19456328)
chr5 (117-322)||(15641098-15641306)
chr5 (125-322)||(34310138-34310339)
chr5 (111-176)||(26009250-26009315)
chr5 (122-243)||(7085623-7085747)
chr5 (125-177)||(10813851-10813903)
chr5 (125-322)||(11926501-11926703)
chr5 (183-320)||(15971181-15971321)
chr5 (252-322)||(12317280-12317351)
chr5 (122-266)||(30485881-30486028)
[»] scaffold0576 (1 HSPs)
scaffold0576 (117-322)||(5074-5283)
[»] chr6 (17 HSPs)
chr6 (117-322)||(15360090-15360299)
chr6 (112-322)||(3222623-3222835)
chr6 (125-314)||(11448875-11449068)
chr6 (117-266)||(1344988-1345140)
chr6 (111-322)||(34147342-34147557)
chr6 (111-322)||(34159958-34160173)
chr6 (117-284)||(17149448-17149618)
chr6 (111-268)||(17081040-17081200)
chr6 (111-322)||(21982307-21982521)
chr6 (204-322)||(12591633-12591753)
chr6 (212-322)||(9208248-9208359)
chr6 (117-226)||(21148503-21148613)
chr6 (218-322)||(33499470-33499576)
chr6 (126-322)||(9238971-9239171)
chr6 (150-322)||(28672063-28672239)
chr6 (251-322)||(30345216-30345288)
chr6 (123-321)||(9843935-9844137)
[»] scaffold0026 (1 HSPs)
scaffold0026 (125-322)||(97366-97567)
[»] scaffold0160 (1 HSPs)
scaffold0160 (125-311)||(29143-29332)
[»] scaffold0366 (2 HSPs)
scaffold0366 (112-320)||(9287-9498)
scaffold0366 (111-320)||(11987-12199)
[»] scaffold0623 (1 HSPs)
scaffold0623 (150-320)||(1081-1255)
[»] scaffold0070 (1 HSPs)
scaffold0070 (111-322)||(40321-40535)
[»] scaffold0028 (1 HSPs)
scaffold0028 (227-322)||(27772-27868)
[»] scaffold0199 (1 HSPs)
scaffold0199 (223-322)||(8508-8608)
[»] scaffold0049 (1 HSPs)
scaffold0049 (111-194)||(66881-66965)
[»] scaffold1175 (1 HSPs)
scaffold1175 (125-226)||(2426-2529)


Alignment Details
Target: chr7 (Bit Score: 396; Significance: 0; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 396; E-Value: 0
Query Start/End: Original strand, 11 - 563
Target Start/End: Complemental strand, 9769899 - 9769345
Alignment:
Q  11 actacncgtcaatacttcaataaagtatcaaacgatagttaactgccgttcggtaggtgtttgagagcaancgttgggtgcctaaagagcaatcatccac 110  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||    
T  9769899 actacacgtcaatacttcaataaagtatcacacgatagttaactgccgttcgataggtgtttgagagcaatcgttgggcgcctaaagagcaatcatccac 9769800  T
Q  111 tttttcttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccgtcatttgcgggggccc-gttctaagacagaac 209  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||    
T  9769799 tttttcttttgttgaaaactcggtattcggttcaaggaccgactaattcaaggggaccaatcccaccgtcatttgcgggggccccgttctaagacagaac 9769700  T
Q  210 aagctctatatgaacttgcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacactcaaa-attccaagccaaccactagcc 308  Q
    |||||||  |||||||||||||||||||||||||||| ||||||||||||| || ||||||||||| |||||||| || |||||||  |||||| |||||    
T  9769699 aagctctgaatgaacttgcccactgaaattgacatcagagagaatcaaacccgaaacattgagaggagcacactccaagattccaaatcaaccattagcc 9769600  T
Q  309 caaccctaaatgggcaacaatcatccacttacttttaaagattactggaatggcccacagtcaatcctgtagtcaaaccaatanttttgaggaaaacagt 408  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||    
T  9769599 caaccccaaatgggtaacaatcatccacttacttttaaagattactggaatggcccatagtcaatcttgtagtcaaaccaataattttgaggaaaacagt 9769500  T
Q  409 gctgaagactattccnggttaccatccaccntgaactgaattattatgngtcgatttcgattacnactaanttcggattggttaangnaaaggngcagng 508  Q
    ||||||||||||||| |||||| ||| ||| ||||| ||||||||||| ||||||||||||||| ||||| |||||||||||||| | ||||| |||| |    
T  9769499 gctgaagactattcccggttacaatcaaccatgaaccgaattattatgagtcgatttcgattacaactaaattcggattggttaatgaaaaggtgcagtg 9769400  T
Q  509 cctatcgtactcntgcaaatgaacngcatgngtttgncanatgcnaactngcttc 563  Q
    |||||||||||| ||||||||||| ||||| ||||| || |||| |||| |||||    
T  9769399 cctatcgtactcatgcaaatgaactgcatgtgtttgtcatatgctaacttgcttc 9769345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 117 - 322
Target Start/End: Complemental strand, 2751480 - 2751271
Alignment:
Q  117 ttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccgtc-atttgcgggggccc-gttctaagacagaacaagct 214  Q
    |||| ||||||||||| ||| || | |||| | |||||||| | | |||||||||||||||| | |||||||||||||| |||  ||| |||| ||||||    
T  2751480 tttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccatttgcgggggccccgtttaaagccagagcaagct 2751381  T
Q  215 ctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacactcaaa-attccaagccaaccactagcccaac 312  Q
    || |||| |||| |||||| ||||||| || || || ||||| |||||||||| ||  |||| ||| |||| || || |||||||||||||||| |||||    
T  2751380 ctgtatggacttagcccaccgaaattggcaccagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaac 2751281  T
Q  313 cctaaatggg 322  Q
    || |||||||    
T  2751280 cccaaatggg 2751271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 111 - 322
Target Start/End: Original strand, 21574088 - 21574304
Alignment:
Q  111 tttttcttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccgtc-atttgcgggggccc-gttctaagacagaa 208  Q
    ||||| |||| ||||||||||| ||| || | ||||||||||||||| | | |||||||||| ||||| | | ||| |||||||| |||||||| | |      
T  21574088 tttttttttttttgaaaactcggtatccgatccaaggaccgactaatccgaggggaccaatctcaccgcctacttgtgggggccccgttctaagcctggg 21574187  T
Q  209 caa-gctctatatgaacttgcccactgaaattgacatcaaagag-aatcaaacctgagacattgagaggngcacactc-aaaattccaagccaaccacta 305  Q
    ||| ||||| |||| |||||||||| ||| ||| || ||||| | |||| |||||| ||| |||||||| |||||||| ||||| |||| ||||||||||    
T  21574188 caaagctctgtatggacttgcccaccgaagttggcaccaaaggggaatcgaacctgtgaccttgagaggagcacactccaaaatcccaaaccaaccacta 21574287  T
Q  306 gcccaaccctaaatggg 322  Q
    | ||||||| |||||||    
T  21574288 ggccaaccccaaatggg 21574304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 112 - 322
Target Start/End: Complemental strand, 11998063 - 11997849
Alignment:
Q  112 ttttcttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccg-tcatttgcgggggccc-gttctaagacagaac 209  Q
    |||| |||| ||||||||||| ||| || | |||| | |||||||||| | ||||||||||||||||  || |||||||||||| |||  ||| |||| |    
T  11998063 ttttttttttttgaaaactcggtatccgatccaagaatcgactaattcgaggggaccaatcccaccgcccacttgcgggggcccagtttaaagccagagc 11997964  T
Q  210 aagctctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacact-caaaattccaagccaaccactagc 307  Q
    ||||| | |||| |||| ||| || ||||||| || || || ||||| |||||||||| |  ||||| ||| ||| ||| || |||||||||||||||||    
T  11997963 aagctatgtatggacttagccaaccgaaattggcaccagagggaatcgaacctgagacctctagaggagcaaactccaagatcccaagccaaccactagc 11997864  T
Q  308 ccaaccctaaatggg 322  Q
    ||||||  |||||||    
T  11997863 ccaaccacaaatggg 11997849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 122 - 266
Target Start/End: Original strand, 654702 - 654848
Alignment:
Q  122 ttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccg-tcatttgcgggggcccgttctaagacagaacaagctctatat 220  Q
    ||||||||||| ||| || | |||| |||||||||| | | ||||||||||||||||  || |||||||||||||||  ||| |||| |||||||| |||    
T  654702 ttgaaaactcggtatccgatccaagaaccgactaatccgaggggaccaatcccaccgcccacttgcgggggcccgtttaaagccagagcaagctctgtat 654801  T
Q  221 gaactt-gcccactgaaattgacatcaaagagaatcaaacctgagac 266  Q
    | |||| |||||| ||||||| || || || ||||| ||||||||||    
T  654802 ggacttagcccaccgaaattggcaccagagggaatcgaacctgagac 654848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 117 - 322
Target Start/End: Original strand, 40542902 - 40543111
Alignment:
Q  117 ttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccgtc-atttgcgggggccc-gttctaagacagaacaagct 214  Q
    |||| ||||||||||| ||| || | |||| | |||||||| | | |||||||||||||||| | | |||||||||||| |||  ||| |||| ||||||    
T  40542902 tttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagct 40543001  T
Q  215 ctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacactcaaa-attccaagccaaccactagcccaac 312  Q
    || |||| |||| |||||| ||||||| || || || ||||| |||||||||| |   |||| ||| |||| || || |||||||||||||||| |||||    
T  40543002 ctgtatggacttagcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaac 40543101  T
Q  313 cctaaatggg 322  Q
    || |||||||    
T  40543102 cccaaatggg 40543111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 210 - 322
Target Start/End: Original strand, 23330827 - 23330940
Alignment:
Q  210 aagctctatatgaacttgcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacactc-aaaattccaagccaaccactagcc 308  Q
    ||||||| |||| |||||||||| ||||||| || |  || || || |||||||||| |||||||| |||||||| ||||| |||||||||||||||| |    
T  23330827 aagctctgtatggacttgcccaccgaaattggcaccggagggagtcgaacctgagaccttgagaggagcacactctaaaatcccaagccaaccactaggc 23330926  T
Q  309 caaccctaaatggg 322  Q
     ||||| |||||||    
T  23330927 taaccccaaatggg 23330940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 125 - 283
Target Start/End: Complemental strand, 7262416 - 7262257
Alignment:
Q  125 aaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccgtcatttgcgggggcccgttctaagacaga-acaagctctatatgaa 223  Q
    |||||||| ||| || ||||||| ||||||||||| | ||||||||||||||| ||| ||| |||| ||| ||  ||| ||||   |||||||||||| |    
T  7262416 aaaactcggtatccgattcaagggccgactaattcgaggggaccaatcccaccatcacttgtggggacccatttaaagccagagtaaagctctatatgga 7262317  T
Q  224 cttgcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacact 283  Q
     ||| |||  ||||||| |||||  ||||||||||| |||||| ||||||||  ||||||    
T  7262316 tttgtccatcgaaattggcatcatggagaatcaaacttgagaccttgagaggatcacact 7262257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 117 - 320
Target Start/End: Complemental strand, 22120097 - 22119890
Alignment:
Q  117 ttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccg-tcatttgcggggg-cccgttctaagacagaacaagct 214  Q
    |||| ||||||||||| ||| || | |||| | |||||||| | | ||||||||||||||||  || ||||||||| ||||||  ||| |||| ||||||    
T  22120097 tttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagct 22119998  T
Q  215 ctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacact-caaaattccaagccaaccactagcccaac 312  Q
    || |||| |||| |||||| ||||||| || || || ||||| |||||||||| |   |||| ||| ||| ||| || |||||||||||||||| |||||    
T  22119997 ctgtatggacttagcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaac 22119898  T
Q  313 cctaaatg 320  Q
    || |||||    
T  22119897 cccaaatg 22119890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 117 - 322
Target Start/End: Complemental strand, 2344508 - 2344299
Alignment:
Q  117 ttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccg-tcatttgcggggg-cccgttctaagacagaacaagct 214  Q
    |||| ||||||||||| ||| || | ||||||||||||||| | | |||||||||||||||| ||| ||||||||| ||||||  ||| || || |||||    
T  2344508 tttttttgaaaactcggtatccgatccaaggaccgactaatccgaggggaccaatcccaccgctcacttgcgggggtcccgtttaaagccaaaaaaagct 2344409  T
Q  215 ctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacact-caaaattccaagccaaccactagcccaac 312  Q
    || |||| |||| ||||||  |||||| || || |  ||||| || ||||||  ||  |||| ||| ||| ||| || |||||||||||||||| |||||    
T  2344408 ctgtatggacttagcccaccaaaattggcaccagaaggaatcgaatctgagagctttggaggagcaaactccaagatcccaagccaaccactaggccaac 2344309  T
Q  313 cctaaatggg 322  Q
    || |||||||    
T  2344308 cccaaatggg 2344299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 125 - 322
Target Start/End: Complemental strand, 7275478 - 7275277
Alignment:
Q  125 aaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccgtc-atttgcgggggccc-gttctaagacagaacaagctctatatga 222  Q
    |||||||| ||| || | |||| | |||||||| | | |||||||||||||||| | | |||||||||||| |||  ||| |||| |||||||| ||||     
T  7275478 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccctgtttaaagccagagcaagctctgtatgg 7275379  T
Q  223 actt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacactcaaa-attccaagccaaccactagcccaaccctaaatg 320  Q
    |||| |||||| ||||||| || || || ||||| |||||||||| |   |||| ||| |||| || || |||||||||||||||| ||||||| |||||    
T  7275378 acttagcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 7275279  T
Q  321 gg 322  Q
    ||    
T  7275278 gg 7275277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 117 - 321
Target Start/End: Complemental strand, 21835360 - 21835152
Alignment:
Q  117 ttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccg-tcatttgcggggg-cccgttctaagacagaacaagct 214  Q
    |||| ||||||||||| ||| || | |||| | |||||||| | | ||||||||||||||||  || ||||||||| ||||||  ||| |||| ||||||    
T  21835360 tttttttgaaaactcgatatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagct 21835261  T
Q  215 ctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacact-caaaattccaagccaaccactagcccaac 312  Q
    || |||| |||| |||||| ||||||| || || || ||||| |||||||||  |   |||| ||| ||| ||| || ||||||||||||||||  ||||    
T  21835260 ctgtatggacttagcccaccgaaattggcaccagagggaatcgaacctgagatctctggaggagcaaactccaagatcccaagccaaccactaggtcaac 21835161  T
Q  313 cctaaatgg 321  Q
    |||||||||    
T  21835160 cctaaatgg 21835152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 147 - 261
Target Start/End: Complemental strand, 35476520 - 35476403
Alignment:
Q  147 gaccgactaattcaatgggaccaatcccaccg-tcatttgcggggg-cccgttctaagacagaacaa-gctctatatgaacttgcccactgaaattgaca 243  Q
    ||||||||||| ||| | ||||||| |||||| |||||||| |||| ||||||||||| |||| ||| ||||| ||||||||| |||||  |||||| ||    
T  35476520 gaccgactaatccaaggagaccaattccaccggtcatttgcaggggtcccgttctaagccagagcaaagctctgtatgaacttacccaccaaaattggca 35476421  T
Q  244 tcaaagagaatcaaacct 261  Q
     ||||||||||| |||||    
T  35476420 ccaaagagaatcgaacct 35476403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 144 - 284
Target Start/End: Complemental strand, 47541565 - 47541423
Alignment:
Q  144 aaggaccgactaattcaatgggaccaatcccaccgtc-atttgcggggg-cccgttctaagacagaacaagctctatatgaacttgcccactgaaattga 241  Q
    ||||| ||||||||  || ||||||||| |||| ||| | ||||||||| ||||||||||| || | |||   ||  ||||||||| |||| ||||||||    
T  47541565 aaggatcgactaatctaaggggaccaattccactgtccacttgcggggggcccgttctaagccaaagcaaagcctggatgaacttgtccaccgaaattga 47541466  T
Q  242 catcaaagagaatcaaacctgagacattgagaggngcacactc 284  Q
    || ||||||||||||||| | | || |||||||| ||||||||    
T  47541465 caccaaagagaatcaaacttaaaaccttgagaggagcacactc 47541423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 122 - 322
Target Start/End: Original strand, 7175859 - 7176063
Alignment:
Q  122 ttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccgtc-atttgcgggggccc-gttctaagacagaacaagctctata 219  Q
    ||||||||||  ||| || | |||| | |||||||| | | |||||||||||||||| | | ||||||||| || |||  ||| |||| |||||||| ||    
T  7175859 ttgaaaactcagtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggtcctgtttaaagccagagcaagctctgta 7175958  T
Q  220 tgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacactcaaa-attccaagccaaccactagcccaaccctaa 317  Q
    || |||| |||||| ||||||| || || || ||||| |||||||||| |   |||| ||| |||| || || |||||||||||||||| ||||||| ||    
T  7175959 tggacttagcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaa 7176058  T
Q  318 atggg 322  Q
    |||||    
T  7176059 atggg 7176063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 322
Target Start/End: Original strand, 21217897 - 21218034
Alignment:
Q  187 gggggcccgttctaagacagaacaagctctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacactca 285  Q
    |||||||||||  |||  ||| |||||||| |||| |||| |||||| ||||||| ||||| || ||||| |||||||||| |   |||| ||| ||||     
T  21217897 gggggcccgtttaaagctagagcaagctctgtatggacttagcccaccgaaattggcatcagagggaatcgaacctgagacctctggaggagcaaactcc 21217996  T
Q  286 aa-attccaagccaaccactagcccaaccctaaatggg 322  Q
    || || |||||||||||||||| ||||||| |||||||    
T  21217997 aagatcccaagccaaccactaggccaaccccaaatggg 21218034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 122 - 313
Target Start/End: Original strand, 9717984 - 9718179
Alignment:
Q  122 ttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccg-tcatttgcg-ggggcccgttctaagacagaacaagctctata 219  Q
    ||||||||||  |||||| |||||| |||||||||||| | | ||||||| |||||| ||||||| | ||| ||||||  ||| |||| |||||||| ||    
T  9717984 ttgaaaactcagtattcgattcaagaaccgactaattcgaggagaccaattccaccgctcatttgtgagggccccgtttaaagccagagcaagctctcta 9718083  T
Q  220 tgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacact-caaaattccaagccaaccactagcccaacc 313  Q
    || |||| |||||  |||||||||| || || ||||| ||| |||||| ||  |||| ||| ||| ||| ||  || |||||||||||| ||||||    
T  9718084 tggacttagcccatcgaaattgacaccagagggaatcgaacttgagacttttggaggagcaaactccaatatctcaggccaaccactaggccaacc 9718179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 111 - 240
Target Start/End: Complemental strand, 23092311 - 23092179
Alignment:
Q  111 tttttcttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccgt-catttgcggggg-cccgttctaagacagaa 208  Q
    ||||| |||| ||||||||||| ||| || | || | | |||||||| | | ||||||||||||||||| |||||||||||| ||||||  ||| ||||     
T  23092311 tttttttttttttgaaaactcggtatccgatccatgaatcgactaatccgaggggaccaatcccaccgtccatttgcgggggccccgtttaaagccagag 23092212  T
Q  209 caagctctatatgaactt-gcccactgaaattg 240  Q
    |||||||| |||| |||| |||||| |||||||    
T  23092211 caagctctgtatggacttagcccaccgaaattg 23092179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 314
Target Start/End: Complemental strand, 22696415 - 22696328
Alignment:
Q  228 cccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacact-caaaattccaagccaaccactagcccaaccc 314  Q
    ||||| ||||||| || || || |||||||||||||||| |||||||| ||||||| ||| || ||||  |||||||||| |||||||    
T  22696415 cccaccgaaattggcaccagagggaatcaaacctgagaccttgagaggagcacactccaagatcccaaatcaaccactaggccaaccc 22696328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 252 - 321
Target Start/End: Original strand, 12211665 - 12211735
Alignment:
Q  252 aatcaaacctgagacattgagaggngcacact-caaaattccaagccaaccactagcccaaccctaaatgg 321  Q
    ||||||||||||||  |||||||| ||||||| ||| || | |||||||||||||| ||||||| ||||||    
T  12211665 aatcaaacctgagatcttgagaggagcacactccaagatcctaagccaaccactaggccaaccccaaatgg 12211735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 245 - 320
Target Start/End: Original strand, 3950911 - 3950988
Alignment:
Q  245 caaagagaatcaaacctgagacattgagaggngcacact-caaaattc-caagccaaccactagcccaaccctaaatg 320  Q
    ||||| ||||| ||| ||||||||||||||| |||| || ||| |||| ||||||||||||||| ||||||| |||||    
T  3950911 caaagggaatcgaacatgagacattgagaggagcacgctccaagattctcaagccaaccactagaccaaccccaaatg 3950988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 125 - 178
Target Start/End: Complemental strand, 47381091 - 47381039
Alignment:
Q  125 aaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccg 178  Q
    |||||||  ||| || ||||||||||||||||||||| ||||||||||||||||    
T  47381091 aaaactcagtatccgattcaaggaccgactaattcaa-gggaccaatcccaccg 47381039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 320
Target Start/End: Original strand, 3951091 - 3951190
Alignment:
Q  223 acttgcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacactcaaaattcc--aagccaaccactagcccaaccctaaatg 320  Q
    |||||||||| ||||||  ||||| ||| || | |||| ||||| |||||||| |||||||| ||  |||  |||||||||||||| ||||||| |||||    
T  3951091 acttgcccaccgaaattagcatcagagaaaagcgaacccgagactttgagaggagcacactccaagatccccaagccaaccactagaccaaccccaaatg 3951190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 322
Target Start/End: Complemental strand, 17212229 - 17212053
Alignment:
Q  150 cgactaattcaatgggaccaatcccaccg-tcatttgcggggg-cccgttctaagacagaacaagctctatatgaactt-gcccactgaaattgacatca 246  Q
    |||||||| | | |||||||||||||||  ||| |||| |||| |||||| |||| |||| ||| |||| |||| |||| |||||| ||||||| || ||    
T  17212229 cgactaatccgaggggaccaatcccaccactcacttgcaggggtcccgttttaagccagagcaatctctgtatggacttagcccaccgaaattggcacca 17212130  T
Q  247 aagagaatcaaacctgagacattgagaggngcacactcaaa-attccaagccaaccactagcccaaccctaaatggg 322  Q
     |||||||  |||||||||| |   |||| ||| |||| || || |||||||||||||||  ||||||| |||||||    
T  17212129 gagagaattgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaagccaaccccaaatggg 17212053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 163 - 322
Target Start/End: Complemental strand, 2103218 - 2103055
Alignment:
Q  163 gggaccaatcccaccgtc-atttgcgggggcccgttctaa-gacagaacaagctctatatgaactt-gcccactgaaattgacatcaaagagaatcaaac 259  Q
    |||||||||||||||| | | ||||||||||||  | ||| | |||| |||||||| |||| |||| |||||| ||||||| |  || || ||||| |||    
T  2103218 gggaccaatcccaccgcccacttgcgggggccccatttaaagccagagcaagctctgtatggacttagcccaccgaaattggctccagagggaatcgaac 2103119  T
Q  260 ctgagacattgagaggngcacactcaaa-attccaagccaaccactagcccaaccctaaatggg 322  Q
    ||||||| |   |||| ||| |||| || || |||||||||||||||| ||||||| |||||||    
T  2103118 ctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatggg 2103055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 117 - 191
Target Start/End: Complemental strand, 16374203 - 16374128
Alignment:
Q  117 ttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccgt-catttgcggggg 191  Q
    |||| ||||||||||| ||| || | |||| | |||||||| | | ||||||||||||||||| ||||||||||||    
T  16374203 tttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgtccatttgcggggg 16374128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 150 - 305
Target Start/End: Complemental strand, 22703662 - 22703503
Alignment:
Q  150 cgactaattcaatgggaccaatcccaccg-tcatttgcggggg-cccgttctaagacagaacaagctctatatgaactt-gcccactgaaattgacatca 246  Q
    |||||||| | | ||||||||||||||||  || ||||||||| ||||||  ||| |||| |||||| | |||| |||| |||||| |||||||||| ||    
T  22703662 cgactaatccgaggggaccaatcccaccgcccacttgcgggggtcccgtttaaagccagagcaagctttgtatggacttagcccaccgaaattgacacca 22703563  T
Q  247 aagagaatcaaacctgagacattgagaggngcacact-caaaattccaagccaaccacta 305  Q
     || ||||| |||||||||| |   |||| ||| ||| ||| || |||||||||||||||    
T  22703562 gagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccacta 22703503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 235 - 300
Target Start/End: Original strand, 29385727 - 29385794
Alignment:
Q  235 aaattgacatcaaagagaatcaaacctgagacattga-gaggngcacact-caaaattccaagccaac 300  Q
    |||||| || |||||||||||||||||||||| |||| |||| ||||||| |||| | ||||||||||    
T  29385727 aaattggcaccaaagagaatcaaacctgagaccttgaggaggagcacactccaaagtcccaagccaac 29385794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 141 - 216
Target Start/End: Original strand, 39145668 - 39145744
Alignment:
Q  141 ttcaaggaccgactaattcaatgggaccaatcccaccgt-catttgcgggggcccgttctaagacagaacaagctct 216  Q
    |||||| | |||||||||| | ||||||||||||||||| || |||| ||||||||||  ||| |||| ||||||||    
T  39145668 ttcaagaatcgactaattcgaggggaccaatcccaccgtccacttgcaggggcccgtttaaagccagagcaagctct 39145744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 3e-34; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 109 - 322
Target Start/End: Original strand, 8192336 - 8192552
Alignment:
Q  109 actttttcttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccgtc-atttgcgggggcccgttctaagacaga 207  Q
    ||||||| |||| ||||||||||| ||| || | ||||||||||||||| | | ||| |||||||||||| | | ||||| ||| |||||||||| ||||    
T  8192336 actttttttttttttgaaaactcggtatccgatccaaggaccgactaatccgaggggcccaatcccaccgcccacttgcgaggggccgttctaagccaga 8192435  T
Q  208 acaa-gctctatatgaacttgcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacact-caaaattccaagccaaccacta 305  Q
     ||| |||||||||| |||||||||| || |||| || || || ||||| |||||||||| |||||||| ||||||| ||| || |||||||||||||||    
T  8192436 gcaaagctctatatggacttgcccaccgacattggcaccagagggaatcgaacctgagaccttgagaggagcacactccaagatcccaagccaaccacta 8192535  T
Q  306 gcccaaccctaaatggg 322  Q
    | ||||||| |||||||    
T  8192536 ggccaaccccaaatggg 8192552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 117 - 322
Target Start/End: Original strand, 44946045 - 44946254
Alignment:
Q  117 ttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccgtc-atttgcggggg-cccgttctaagacagaacaagct 214  Q
    |||| ||||||||||| ||| || | |||| | |||||||| | | |||||||||||||||| | | ||||||||| ||||||  ||| |||| |||| |    
T  44946045 tttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggggcccgtttaaagccagagcaagtt 44946144  T
Q  215 ctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacactcaaa-attccaagccaaccactagcccaac 312  Q
    || |||| |||| |||||| ||||||| || ||||| ||||| |||||||||| |   |||| ||| |||| || || |||||||||||||||| |||||    
T  44946145 ctgtatggacttagcccaccgaaattggcaccaaagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactagaccaac 44946244  T
Q  313 cctaaatggg 322  Q
    || |||||||    
T  44946245 cccaaatggg 44946254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 163 - 284
Target Start/End: Complemental strand, 18708636 - 18708512
Alignment:
Q  163 gggaccaatcccaccgtc-atttgcggggg-cccgttctaagacagaacaa-gctctatatgaacttgcccactgaaattgacatcaaagagaatcaaac 259  Q
    |||| ||||||||||||| ||||||||||| |||||| |||| |||| ||| ||||| ||||||| |||||||||||||||  |||| || || || |||    
T  18708636 gggatcaatcccaccgtccatttgcgggggtcccgttttaagtcagagcaaagctctgtatgaacatgcccactgaaattggtatcagagggagtcgaac 18708537  T
Q  260 ctgagacattgagaggngcacactc 284  Q
    ||||||| ||||||||  |||||||    
T  18708536 ctgagaccttgagaggaacacactc 18708512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 111 - 322
Target Start/End: Complemental strand, 15038170 - 15037955
Alignment:
Q  111 tttttcttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccg-tcatttgcgggggc-ccgttctaagacagaa 208  Q
    ||||| |||| ||||||||||| ||| || | |||| | ||||||||   | ||||||||||||||||  || |||||||||| |||||  ||| || |     
T  15038170 tttttttttttttgaaaactcggtatccgatccaagaatcgactaatctgaggggaccaatcccaccgcccacttgcgggggctccgtttaaagccaaag 15038071  T
Q  209 caagctctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacact-caaaattccaagccaaccactag 306  Q
    |||||||| |||| |||| |||||| ||||||| || ||||| ||||| |||||||||| ||  |||| ||| ||| ||| || || || ||||||||||    
T  15038070 caagctctgtatggacttagcccaccgaaattggcaccaaagggaatcgaacctgagacctttggaggagcaaactccaagatcccgagtcaaccactag 15037971  T
Q  307 cccaaccctaaatggg 322  Q
     ||||||| |||||||    
T  15037970 gccaaccccaaatggg 15037955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 111 - 322
Target Start/End: Original strand, 33827559 - 33827774
Alignment:
Q  111 tttttcttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccg-tcatttgc-gggggcccgttctaagacagaa 208  Q
    ||||| |||| ||||||||||| ||| || | |||| | |||||||| ||| ||||||||||||||||  || |||| |||| ||||||  ||| ||||     
T  33827559 tttttttttttttgaaaactcggtatccgatccaagaatcgactaatccaaggggaccaatcccaccgcccacttgcaggggtcccgtttaaagccagag 33827658  T
Q  209 caagctctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacact-caaaattccaagccaaccactag 306  Q
    |||||||| |||| |||| |||||  ||||||| || || || ||||| |||||||||| |   |||| |||  || ||| || ||||||||||||||||    
T  33827659 caagctctgtatggacttagcccaacgaaattggcaccagagggaatcgaacctgagacctctggaggagcaatctccaagatcccaagccaaccactag 33827758  T
Q  307 cccaaccctaaatggg 322  Q
     ||||||| |||||||    
T  33827759 gccaaccccaaatggg 33827774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 125 - 322
Target Start/End: Original strand, 30466830 - 30467031
Alignment:
Q  125 aaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccgtc-atttgcgggggcccgttctaa-gacagaacaagctctatatga 222  Q
    |||||||| ||| || | |||| | |||||||| | | |||||||||||||| | | | ||||||||||||| | ||| | |||| |||||||| ||||     
T  30466830 aaaactcggtatccgatccaagaatcgactaatccgaagggaccaatcccactgcccacttgcgggggcccggtttaaagccagagcaagctctgtatgg 30466929  T
Q  223 actt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacactcaaa-attccaagccaaccactagcccaaccctaaatg 320  Q
    |||| |||||| ||||||| || || |||||||| |||||||||| |  |||||  || |||| || || |||| ||||||||||| ||||||| |||||    
T  30466930 acttagcccaccgaaattggcagcagagagaatcgaacctgagacctctagaggaacaaactccaatatcccaaaccaaccactaggccaaccccaaatg 30467029  T
Q  321 gg 322  Q
    ||    
T  30467030 gg 30467031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 125 - 178
Target Start/End: Complemental strand, 44610236 - 44610183
Alignment:
Q  125 aaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccg 178  Q
    |||||||| |||||||| |||| |||||||||| | ||||||||||||||||||    
T  44610236 aaaactcggtattcggtccaagaaccgactaatccgatgggaccaatcccaccg 44610183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 141 - 201
Target Start/End: Complemental strand, 12543324 - 12543263
Alignment:
Q  141 ttcaaggaccgactaattcaatgggaccaatcccaccgt-catttgcgggggcccgttctaa 201  Q
    ||||||||||||||||||||| |||| |||||||||| | || |||||||||||| ||||||    
T  12543324 ttcaaggaccgactaattcaaggggagcaatcccaccatccacttgcgggggccctttctaa 12543263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 111 - 240
Target Start/End: Complemental strand, 35172011 - 35171879
Alignment:
Q  111 tttttcttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccg-tcatttgcggggg-cccgttctaagacagaa 208  Q
    ||||| |||| ||||||||||| ||| || |||||| | |||||||| | | ||||||||||||||||  || ||||||||| ||||||  ||| ||||     
T  35172011 tttttttttttttgaaaactcggtatccgattcaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagag 35171912  T
Q  209 caagctctatatgaactt-gcccactgaaattg 240  Q
    |||||||| |||| |||| |||||| |||||||    
T  35171911 caagctctgtatggacttagcccaccgaaattg 35171879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 210 - 281
Target Start/End: Complemental strand, 30943205 - 30943134
Alignment:
Q  210 aagctctatatgaacttgcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcaca 281  Q
    ||||||| |||| ||| |||||| ||||||| ||| | |||||||||||| |||||| |||||||| |||||    
T  30943205 aagctctgtatggactagcccaccgaaattggcataagagagaatcaaacttgagaccttgagaggagcaca 30943134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 306
Target Start/End: Original strand, 19605936 - 19606030
Alignment:
Q  213 ctctatatgaacttgcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacactcaaa-attccaagccaaccactag 306  Q
    |||| |||| |||||||||| ||||||  ||| | || ||||| |||||||||| |||||||| || ||||| || || ||||||||||||||||    
T  19605936 ctctgtatggacttgcccaccgaaattagcattagagggaatcgaacctgagaccttgagaggagcgcactccaagatcccaagccaaccactag 19606030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 150 - 305
Target Start/End: Original strand, 10582017 - 10582174
Alignment:
Q  150 cgactaattcaatgggaccaatcccaccgtcatttgcgggggcccgttctaagacagaacaagctctatatgaactt-gcccactgaaattgacatcaaa 248  Q
    |||||||||| | ||||||||||||||   || ||||| |||||||||  |||  ||| |||||||| |||| |||| |||||| ||||||| || || |    
T  10582017 cgactaattcgaggggaccaatcccacgcccacttgcgagggcccgtttaaagctagagcaagctctgtatggacttagcccaccgaaattggcaccaga 10582116  T
Q  249 gagaatcaaacctgagacattgagaggngcacact-caaaattccaagccaaccacta 305  Q
    | ||||| |||||||||| |   |||| ||| ||| ||| || |||||||||||||||    
T  10582117 gggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccacta 10582174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 210 - 279
Target Start/End: Complemental strand, 29698256 - 29698187
Alignment:
Q  210 aagctctatatgaacttgcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngca 279  Q
    ||||||| ||||||||||||||| |||||||||| || ||  ||| |||| |||||| |||||||| |||    
T  29698256 aagctctgtatgaacttgcccaccgaaattgacaccagaggaaataaaacttgagaccttgagaggagca 29698187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 212 - 284
Target Start/End: Complemental strand, 40591290 - 40591218
Alignment:
Q  212 gctctatatgaacttgcccactgaaattgacatca-aagagaatcaaacctgagacattgagaggngcacactc 284  Q
    ||||| |||| |||||||||| ||||||| || || |||| ||||||||||||||| |||||||| ||||||||    
T  40591290 gctctgtatggacttgcccaccgaaattgccaccagaaga-aatcaaacctgagactttgagaggagcacactc 40591218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 122 - 178
Target Start/End: Complemental strand, 14487025 - 14486969
Alignment:
Q  122 ttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccg 178  Q
    ||||||||||| ||| || | ||||||||||||||| | | ||||||||||||||||    
T  14487025 ttgaaaactcggtatccgatccaaggaccgactaatccgaggggaccaatcccaccg 14486969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 266
Target Start/End: Complemental strand, 41314150 - 41314045
Alignment:
Q  163 gggaccaatcccaccgt-catttgcgggggcccgttctaagacagaacaagctctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacc 260  Q
    ||||||||||||||||| || |||||||  ||||||  ||| |||| |||||||| |||  |||| |||||| |||||||||| || || ||||| ||||    
T  41314150 gggaccaatcccaccgtccacttgcgggatcccgtttaaagtcagagcaagctctgtatagacttagcccaccgaaattgacaccagagggaatcgaacc 41314051  T
Q  261 tgagac 266  Q
    ||||||    
T  41314050 tgagac 41314045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 252 - 314
Target Start/End: Original strand, 4618815 - 4618878
Alignment:
Q  252 aatcaaacctgagacattgagaggngcacactcaaa-attccaagccaaccactagcccaaccc 314  Q
    |||| ||||||| || |||||||| ||| |||| || ||||||||||||||||||| |||||||    
T  4618815 aatcgaacctgaaaccttgagaggagcatactccaagattccaagccaaccactaggccaaccc 4618878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 218 - 270
Target Start/End: Complemental strand, 10324996 - 10324944
Alignment:
Q  218 tatgaacttgcccactgaaattgacatcaaagagaatcaaacctgagacattg 270  Q
    ||||||||||||||| |||||| |||| | || ||||| ||||||||||||||    
T  10324996 tatgaacttgcccaccgaaattaacataagagggaatcgaacctgagacattg 10324944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 234 - 320
Target Start/End: Complemental strand, 18692067 - 18691980
Alignment:
Q  234 gaaattgacatcaaagagaatcaaacctgagacattgagaggngcacactc-aaaattccaagccaaccactagcccaaccctaaatg 320  Q
    |||||||||||   || ||||| |||||||||  |||||| | |||||||| |||||||||||| ||||| ||| ||||||| |||||    
T  18692067 gaaattgacataggagggaatcgaacctgagatcttgagatgagcacactccaaaattccaagcaaaccattaggccaaccccaaatg 18691980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 125 - 180
Target Start/End: Original strand, 44929846 - 44929901
Alignment:
Q  125 aaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccgtc 180  Q
    |||||||| ||| || | |||| | |||||||||||| ||||||||||||||||||    
T  44929846 aaaactcggtatccgatccaagaatcgactaattcaaggggaccaatcccaccgtc 44929901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 3e-25; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 117 - 322
Target Start/End: Original strand, 40133441 - 40133650
Alignment:
Q  117 ttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccg-tcatttgcggggg-cccgttctaagacagaacaagct 214  Q
    |||| ||||||||||| ||| || | |||| | |||||||||| | ||||||||||||||||  || ||||||||| ||||||  ||| |||| ||||||    
T  40133441 tttttttgaaaactcggtatccgatccaagaatcgactaattcgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagct 40133540  T
Q  215 ctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacact-caaaattccaagccaaccactagcccaac 312  Q
    || |||| |||| |||||| |||||||||| || || ||||| |||||||||| ||  |||| ||| ||| |||||| |||||||||||||||| |||||    
T  40133541 ctgtatggacttagcccaccgaaattgacaccagagggaatcgaacctgagacctttggaggagcaaactccaaaatcccaagccaaccactaggccaac 40133640  T
Q  313 cctaaatggg 322  Q
    || |||||||    
T  40133641 cccaaatggg 40133650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 117 - 322
Target Start/End: Original strand, 53424169 - 53424377
Alignment:
Q  117 ttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccg-tcatttgcgggggcccgttctaagacagaacaagctc 215  Q
    |||| ||||||||||| ||| || | |||| | |||||||| | | |||||||||||||||| ||| |||||||||||||||  ||| || | ||| |||    
T  53424169 tttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgctcacttgcgggggcccgtttaaagccatagcaaactc 53424268  T
Q  216 tatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacactcaaa-attccaagccaaccactagcccaacc 313  Q
    | |||| |||| |||||| ||||||| || ||||| ||||| |||||||||| |   |||| ||| |||| || || |||||||||||||||| ||||||    
T  53424269 tgtatggacttagcccaccgaaattggcaccaaagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 53424368  T
Q  314 ctaaatggg 322  Q
    | |||||||    
T  53424369 ccaaatggg 53424377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 111 - 322
Target Start/End: Complemental strand, 46576559 - 46576344
Alignment:
Q  111 tttttcttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccg-tcatttgcggggg-cccgttctaagacagaa 208  Q
    ||||| |||| ||||||||||| ||| || | |||| | |||||||| ||| ||||||||||| ||||  || ||||||||| ||||||  ||| ||||     
T  46576559 tttttttttttttgaaaactcggtatccgatccaagaatcgactaatccaaggggaccaatccgaccgcccacttgcgggggccccgtttaaagccagag 46576460  T
Q  209 caagctctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacact-caaaattccaagccaaccactag 306  Q
    |||||||| |||| |||| |||||||||||||| || || || ||||| |||||||||| |   |||| ||| ||| ||| || ||||||||||||||||    
T  46576459 caagctctgtatggacttagcccactgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactag 46576360  T
Q  307 cccaaccctaaatggg 322  Q
     ||||||| |||||||    
T  46576359 gccaaccccaaatggg 46576344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 122 - 322
Target Start/End: Original strand, 8456147 - 8456351
Alignment:
Q  122 ttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccg-tcatttgcggggg-cccgttctaagacagaacaagctctata 219  Q
    ||||||||||| ||| || |||||| | |||||||| | | |||||||||||||| |  || ||||||||| ||||||  ||| |||| |||||||| ||    
T  8456147 ttgaaaactcggtatccgattcaagaatcgactaatccgaggggaccaatcccactgcccacttgcgggggccccgtttaaagccagagcaagctctgta 8456246  T
Q  220 tgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacactc-aaaattccaagccaaccactagcccaaccctaa 317  Q
    || |||| |||||| ||||||| || || || ||||| |||||||||| |   |||| ||| |||| || || |||||||||||||||| ||||||| ||    
T  8456247 tggacttagcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactcgaagatcccaagccaaccactaggccaaccccaa 8456346  T
Q  318 atggg 322  Q
    |||||    
T  8456347 atggg 8456351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 111 - 322
Target Start/End: Original strand, 25289701 - 25289915
Alignment:
Q  111 tttttcttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccgtc-atttgcgggggccc-gttctaagacagaa 208  Q
    ||||| |||| ||||||||||| ||| || | |||| | |||||||||| | |||||||||||||||| | | |||||||||||| |||  ||| ||||     
T  25289701 tttttttttttttgaaaactcggtatccgatccaagaatcgactaattcga-gggaccaatcccaccgcccacttgcgggggccccgtttaaagccagag 25289799  T
Q  209 caagctctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacactcaaa-attccaagccaaccactag 306  Q
    |||||||| |||| |||| |||||| ||||||| ||  | || ||||| |||||||||| |   |||| ||| |||| || || ||||||||||||||||    
T  25289800 caagctctgtatggacttagcccaccgaaattggcactagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactag 25289899  T
Q  307 cccaaccctaaatggg 322  Q
     ||||||| |||||||    
T  25289900 accaaccccaaatggg 25289915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 111 - 322
Target Start/End: Complemental strand, 48977599 - 48977384
Alignment:
Q  111 tttttcttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccg-tcatttgc-gggggcccgttctaagacagaa 208  Q
    ||||| |||| ||||||||||| ||| || | ||||||||||||||| | | ||||||||||||||||  || |||| |||| ||||||  ||| ||||     
T  48977599 tttttatttttttgaaaactcggtatccgatccaaggaccgactaatccgaggggaccaatcccaccgcccacttgcaggggccccgtttaaagccagag 48977500  T
Q  209 caagctctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacact-caaaattccaagccaaccactag 306  Q
    |||||||| |||| ||||  ||||| ||||||| || || |  ||||| |||||||||| ||  |||| ||| ||| ||| || ||||| ||||||||||    
T  48977499 caagctctgtatggacttaacccaccgaaattggcaccagaaggaatcgaacctgagacctttggaggagcaaactccaagatcccaagtcaaccactag 48977400  T
Q  307 cccaaccctaaatggg 322  Q
     ||||||| |||||||    
T  48977399 gccaaccccaaatggg 48977384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 143 - 322
Target Start/End: Original strand, 4252414 - 4252597
Alignment:
Q  143 caaggaccgactaattcaatgggaccaatcccaccgtc-atttgcgggggc-ccgttctaagacagaacaa-gctctatatgaacttgcccactgaaatt 239  Q
    |||||| |||||||| | | |||||||||||||||||| | ||| |||||  |||||||||  ||||  || ||| | |||| |||||  ||||||||||    
T  4252414 caaggatcgactaatccgaggggaccaatcccaccgtccacttgtgggggggccgttctaaaccagagtaaagctttgtatggacttgatcactgaaatt 4252513  T
Q  240 gacatcaaagagaatcaaacctgagacattgagaggngcacact-caaaattccaagccaaccactagcccaaccctaaatggg 322  Q
    | || || || ||||||||| |||||| |||||||| ||||||| ||| ||  ||||||||||||||| ||||||| |||||||    
T  4252514 ggcaccagagggaatcaaacttgagaccttgagaggagcacactccaagatctcaagccaaccactaggccaaccccaaatggg 4252597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 125 - 322
Target Start/End: Complemental strand, 35493108 - 35492907
Alignment:
Q  125 aaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccgtc-atttgcgggggccc-gttctaagacagaacaagctctatatga 222  Q
    |||||||| |||||  | |||| | |||||||| | | |||||||||||||||| | | |||||||||||| |||  ||| |||| |||||||| ||||     
T  35493108 aaaactcggtattcaatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatgg 35493009  T
Q  223 actt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacactcaaa-attccaagccaaccactagcccaaccctaaatg 320  Q
    |||| |||||| ||||||| || || || ||||| |||||||||| |   |||| ||| |||| || || |||||||||||||||| ||||||| |||||    
T  35493008 acttagcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 35492909  T
Q  321 gg 322  Q
    ||    
T  35492908 gg 35492907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 112 - 266
Target Start/End: Complemental strand, 51532999 - 51532842
Alignment:
Q  112 ttttcttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccgt-catttgcggggg-cccgttctaagacagaac 209  Q
    |||| |||| ||||||||||| ||||||| ||||| ||||||||||   | ||||||||||||||||| || ||||||||| ||| ||  |||  ||| |    
T  51532999 ttttttttttttgaaaactcggtattcggatcaagaaccgactaatctgaggggaccaatcccaccgtccacttgcgggggtcccatttaaagttagagc 51532900  T
Q  210 aagctctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagac 266  Q
    ||||||| |||| |||| |||||| ||||||| ||| | |||||||| ||| ||||||    
T  51532899 aagctctgtatggacttagcccaccgaaattggcattagagagaatcgaacatgagac 51532842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 111 - 264
Target Start/End: Original strand, 10190728 - 10190884
Alignment:
Q  111 tttttcttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccgt-catttgcggggg-cccgttctaagacagaa 208  Q
    ||||| |||| ||||||||||| ||| || | |||| | |||||||| | | ||||||||||||||||| || ||||||||| ||||||  ||| ||||     
T  10190728 tttttttttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgtccacttgcgggggccccgtttaaagccagag 10190827  T
Q  209 caagctctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgag 264  Q
    |||||||| |||| |||| |||||| ||||||| ||  | || ||||||||||||||    
T  10190828 caagctctgtatggacttagcccaccgaaattggcactagagggaatcaaacctgag 10190884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 110 - 314
Target Start/End: Original strand, 15566485 - 15566692
Alignment:
Q  110 ctttttcttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccg-tcatttgcgggggcccgttctaagacagaa 208  Q
    |||||| |||| ||||||||||| ||| || | |||| | ||||||||   | ||||||||||||||||  || |||||||||||||||  ||| ||||     
T  15566485 ctttttttttttttgaaaactcggtatccgatccaagaatcgactaatctgaggggaccaatcccaccgcccacttgcgggggcccgtttaaagccagag 15566584  T
Q  209 caagctctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacact-caaaattccaagccaaccactag 306  Q
    |||||||| |||| |||| |||||| ||||||| ||  | || ||||| |||||||||| |   |||| ||| ||| ||| ||  |||||||||||||||    
T  15566585 caagctctgtatggacttagcccaccgaaattggcactagagggaatcgaacctgagacctctggaggagcaaactccaagatctcaagccaaccactag 15566684  T
Q  307 cccaaccc 314  Q
     |||||||    
T  15566685 gccaaccc 15566692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 109 - 322
Target Start/End: Original strand, 30807137 - 30807354
Alignment:
Q  109 actttttcttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccgtc-atttgcggggg--cccgttctaagaca 205  Q
    ||||||| |||| ||||||||||| ||| || | |||| | |||||||| | | ||||||||||| |||| | | |||||||||  ||||||  ||| ||    
T  30807137 actttttttttttttgaaaactcggtatccgatccaagaatcgactaatccga-gggaccaatcctaccgcccacttgcggggggccccgtttaaagcca 30807235  T
Q  206 gaacaagctctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacactcaaa-attccaagccaaccac 303  Q
    || |||||||| |||| |||| |||||| ||||||| || || || ||||| |||||||||| |   |||| ||| |||| || || |||||||||||||    
T  30807236 gagcaagctctgtatggacttagcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccac 30807335  T
Q  304 tagcccaaccctaaatggg 322  Q
    ||| ||||||| |||||||    
T  30807336 taggccaaccccaaatggg 30807354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 109 - 308
Target Start/End: Original strand, 53233895 - 53234097
Alignment:
Q  109 actttttcttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccgtc-atttgcgggggcccgttcta-agacag 206  Q
    ||||||| |||| ||||||||||| ||| || | |||| | |||||||| | | |||||||||||||||| | | ||||||||||||  | || || |||    
T  53233895 actttttttttttttgaaaactcggtatccgat-caagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttagagccag 53233993  T
Q  207 aacaagctctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacactcaaa-attccaagccaaccact 304  Q
    | |||||||| |||| |||| |||||| ||||||| || || |||||||| |||||||||| |   |||| ||| |||| || || ||||||||||||||    
T  53233994 agcaagctctgtatggacttagcccaccgaaattggcaccagagagaatcgaacctgagacttctggaggagcaaactccaagatcccaagccaaccact 53234093  T
Q  305 agcc 308  Q
    ||||    
T  53234094 agcc 53234097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 209 - 314
Target Start/End: Complemental strand, 19857162 - 19857056
Alignment:
Q  209 caagctctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacactcaaaattccaagccaaccactagc 307  Q
    |||||||||  ||||||| |||||| |||||||||| ||||| ||||| ||||||||||||   |||| ||| |||| ||  |||||||||||||| ||     
T  19857162 caagctctaactgaacttagcccaccgaaattgacaccaaagggaatcgaacctgagacatctggaggagcaaactccaagatccaagccaaccaccagg 19857063  T
Q  308 ccaaccc 314  Q
    |||||||    
T  19857062 ccaaccc 19857056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 111 - 264
Target Start/End: Original strand, 10083805 - 10083961
Alignment:
Q  111 tttttcttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccgt-catttgcggggg-cccgttctaagacagaa 208  Q
    ||||| |||| ||||||||||| ||| || | |||| | |||||||| | | ||||||||||||||||| || ||| ||||| ||||||  ||| ||||     
T  10083805 tttttttttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgtccacttgtgggggccccgtttaaagccagag 10083904  T
Q  209 caagctctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgag 264  Q
    |||||||| |||| |||| |||||| ||||||| ||  | || ||||||||||||||    
T  10083905 caagctctgtatggacttagcccaccgaaattggcactagagggaatcaaacctgag 10083961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 143 - 284
Target Start/End: Complemental strand, 26158990 - 26158853
Alignment:
Q  143 caaggaccgactaattcaatgggaccaatcccaccgtc-atttgcgggggc-ccgttctaagacagaacaagctctatatgaacttgcccactgaaattg 240  Q
    ||||||||||||||| | | |||| ||||||||||| | | |||||||||| |||||||||| |||| |      | |||| |||| ||||| |||||||    
T  26158990 caaggaccgactaatccgaggggatcaatcccaccgcccacttgcgggggctccgttctaagccagagc------tgtatggacttacccaccgaaattg 26158897  T
Q  241 acatcaaagagaatcaaacctgagacattgagaggngcacactc 284  Q
     || ||||| |||| ||||||||||| |||||||| ||||||||    
T  26158896 gcaccaaagggaatgaaacctgagaccttgagaggagcacactc 26158853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 111 - 322
Target Start/End: Original strand, 45529741 - 45529955
Alignment:
Q  111 tttttcttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccgtc-atttgcggggg-cccgttctaagacagaa 208  Q
    ||||| |||| ||||||||||| ||| || | |||| | |||||||| | | |||||||||||||||| | | ||||||||| ||||||  ||| ||||     
T  45529741 tttttatttttttgaaaactcggtatccgat-caagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggggcccgtttaaagccagag 45529839  T
Q  209 caagctctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacactcaaa-attccaagccaaccactag 306  Q
    |||||||| |||| |||| |||||  ||||||| |  || || ||||| |||||||||| |   |||| ||| |||| || || ||||||||||||||||    
T  45529840 caagctctgtatggacttagcccatcgaaattggctccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactag 45529939  T
Q  307 cccaaccctaaatggg 322  Q
     ||||||| |||||||    
T  45529940 gccaaccccaaatggg 45529955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 117 - 322
Target Start/End: Complemental strand, 30257829 - 30257620
Alignment:
Q  117 ttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccgtc-atttgcgggggcccgttctaa-gacagaacaagct 214  Q
    |||| ||||||| ||| ||| || | |||| | |||||||| | | ||||||||| |||||| | | ||||||||||||  | ||| | |||| ||||||    
T  30257829 tttttttgaaaattcggtatccgatccaagaatcgactaatccgaggggaccaatgccaccgcccacttgcgggggccccatttaaagccagagcaagct 30257730  T
Q  215 ctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacactcaaa-attccaagccaaccactagcccaac 312  Q
    || |||| |||| | |||  ||||||| || ||||| ||||| |||||||||| ||  |||| ||| |||| || || |||||||||||||||| |||||    
T  30257729 ctgtatggacttagtccatcgaaattggcaccaaagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaac 30257630  T
Q  313 cctaaatggg 322  Q
    || |||||||    
T  30257629 cccaaatggg 30257620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 284
Target Start/End: Complemental strand, 40777117 - 40777055
Alignment:
Q  222 aacttgcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacactc 284  Q
    |||| |||||| ||||||| ||  | ||||||||||||||||||| |||||||| ||||||||    
T  40777117 aactagcccaccgaaattggcactagagagaatcaaacctgagaccttgagaggagcacactc 40777055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 313
Target Start/End: Original strand, 55371381 - 55371477
Alignment:
Q  218 tatgaacttgcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacactcaaaattc-caagccaaccactagcccaacc 313  Q
    |||||||||| || | ||||||| || ||||| ||||| ||| |||||| |||||||  ||| |||| ||| || ||||||||||||||| ||||||    
T  55371381 tatgaacttgtccgccgaaattggcaccaaagggaatcgaacatgagaccttgagagaagcatactccaaaatcgcaagccaaccactaggccaacc 55371477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 163 - 322
Target Start/End: Original strand, 45272454 - 45272617
Alignment:
Q  163 gggaccaatcccaccg-tcatttgcggggg-cccgttctaagacagaacaagctctatatgaactt-gcccactgaaattgacatcaaagagaatcaaac 259  Q
    ||||||||||||||||  || ||||||||| ||||||  ||| |||| |||||||  |||| |||| |||||| ||||||| || || || ||||| ||     
T  45272454 gggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctccgtatggacttagcccaccgaaattggcaccagagggaatcgaaa 45272553  T
Q  260 ctgagacattgagaggngcacact-caaaattccaagccaaccactagcccaaccctaaatggg 322  Q
    |||||||||   |||| ||| ||| ||| || |||||||||| ||||| ||||||| |||||||    
T  45272554 ctgagacatctggaggagcaaactccaagatcccaagccaacgactaggccaaccccaaatggg 45272617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 3e-25; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 112 - 322
Target Start/End: Complemental strand, 32729754 - 32729541
Alignment:
Q  112 ttttcttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccgtc-atttgcgggggcccgttctaa-gacagaac 209  Q
    |||| |||| ||||||||||| ||| || | ||| ||||||||||| ||| |||| ||||||||||| | | |||||||| |||  | ||| | |||| |    
T  32729754 ttttttttttttgaaaactcggtatccgatccaaagaccgactaatccaaggggatcaatcccaccgcccacttgcggggaccccatttaaagccagagc 32729655  T
Q  210 aagctctatatgaacttgcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacactcaaa-attccaagccaaccactagcc 308  Q
    ||||||| |||| |||||||||| ||||||| || || || ||||| |||||||||| |||||||| ||| |||| || || |||||||||||||||| |    
T  32729654 aagctctgtatggacttgcccaccgaaattggcaccatagggaatcgaacctgagactttgagaggagcaaactcgaagatcccaagccaaccactaggc 32729555  T
Q  309 caaccctaaatggg 322  Q
    |||||| |||||||    
T  32729554 caaccccaaatggg 32729541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 109 - 266
Target Start/End: Original strand, 8254736 - 8254896
Alignment:
Q  109 actttttcttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccg-tcatttgcggggg-cccgttctaagacag 206  Q
    ||||||| |||| ||||||||||| ||| || |||||| | |||||||||||| |||| |||||||||||  || ||||||||| ||||||  ||| |||    
T  8254736 actttttttttttttgaaaactcggtatccgattcaagaatcgactaattcaaggggatcaatcccaccgcccacttgcgggggccccgtttaaagccag 8254835  T
Q  207 aacaagctctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagac 266  Q
    | |||| ||| ||||||||| |||||| |||||||||| || ||| |||| ||||||||||    
T  8254836 agcaagttctgtatgaacttagcccaccgaaattgacaccagagataatcgaacctgagac 8254896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 117 - 322
Target Start/End: Original strand, 15059394 - 15059603
Alignment:
Q  117 ttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccgtc-atttgcgggggccc-gttctaagacagaacaagct 214  Q
    |||| ||||||||||| ||| || | |||| | |||||||||| | |||||||||| ||||| | | |||||||| ||| |||  ||| |||| ||||||    
T  15059394 tttttttgaaaactcggtatccgatccaagaatcgactaattcgaggggaccaatctcaccgcccacttgcggggaccccgtttaaagccagagcaagct 15059493  T
Q  215 ctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacactcaaa-attccaagccaaccactagcccaac 312  Q
    || |||| |||| |||||| ||||||| || || |||||||| |||||||||| |   |||| ||| |||| || ||||||||||||||||||| |||||    
T  15059494 ctgtatggacttagcccaccgaaattggcaccagagagaatcgaacctgagacctctggaggagcaaactccaagattccaagccaaccactaggccaac 15059593  T
Q  313 cctaaatggg 322  Q
    || |||||||    
T  15059594 cccaaatggg 15059603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 125 - 322
Target Start/End: Complemental strand, 1486617 - 1486416
Alignment:
Q  125 aaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccgt-catttgcggggg---cccgttctaagacagaac-aagctctata 219  Q
    |||||||| ||| || | |||||||||||||||   | |||||| |||||||||| || |||||||||   ||||||||||| |||| | ||||||| ||    
T  1486617 aaaactcggtatccgatccaaggaccgactaatcggaggggaccgatcccaccgtccacttgcgggggggccccgttctaagtcagagcaaagctctgta 1486518  T
Q  220 tgaacttgcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacactcaaaattccaagccaaccactagcccaaccctaaat 319  Q
    || |||| ||||  ||||||| || ||||| ||||| |||||||||| |||||||  |||| | ||| || ||||||||||||||||  |||||| ||||    
T  1486517 tggacttacccatcgaaattggcaccaaagggaatcgaacctgagaccttgagagtagcactc-caagatcccaagccaaccactaggtcaaccccaaat 1486419  T
Q  320 ggg 322  Q
    |||    
T  1486418 ggg 1486416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 163 - 322
Target Start/End: Complemental strand, 8077806 - 8077643
Alignment:
Q  163 gggaccaatcccaccgtc-atttgcgggggccc-gttctaagacagaacaagctctatatgaactt-gcccactgaaattgacatcaaagagaatcaaac 259  Q
    |||||||||||||||| | | |||||||||||| |||  ||| |||| |||||||| |||| |||| |||||| ||||||| || || |||||||| |||    
T  8077806 gggaccaatcccaccgcccacttgcgggggccctgtttaaagccagagcaagctctgtatggacttagcccaccgaaattggcaccagagagaatcgaac 8077707  T
Q  260 ctgagacattgagaggngcacactcaaa-attccaagccaaccactagcccaaccctaaatggg 322  Q
    ||||||| |   |||| ||| |||| || || |||||||||||||||| ||||||| |||||||    
T  8077706 ctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatggg 8077643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 117 - 322
Target Start/End: Original strand, 4621229 - 4621438
Alignment:
Q  117 ttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccgtc-atttgcgggggccc-gttctaagacagaacaagct 214  Q
    |||| ||||||||||| ||| || | |||| | |||||||| | | |||||||||||||||| | | |||||||| ||| |||  ||| |||| ||||||    
T  4621229 tttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggaccccgtttaaagccagagcaagct 4621328  T
Q  215 ctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacactcaaa-attccaagccaaccactagcccaac 312  Q
    || |||| |||| |||||| ||||||| || || || ||||| |||||||||| |   |||| ||| |||| || || |||||||||||||||| |||||    
T  4621329 ctgtatggacttagcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaac 4621428  T
Q  313 cctaaatggg 322  Q
    || |||||||    
T  4621429 cccaaatggg 4621438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 150 - 322
Target Start/End: Complemental strand, 24674565 - 24674389
Alignment:
Q  150 cgactaattcaatgggaccaatcccaccgtc-atttgcgggggccc-gttctaagacagaacaagctctatatgaactt-gcccactgaaattgacatca 246  Q
    |||||||| | | |||||||||||||||| | | |||||||||||| |||  ||| |||| |||||||| |||| |||| |||||| ||||||| || ||    
T  24674565 cgactaatacgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagcccaccgaaattggcacca 24674466  T
Q  247 aagagaatcaaacctgagacattgagaggngcacactcaaa-attccaagccaaccactagcccaaccctaaatggg 322  Q
     || ||||| |||||||||| |   |||| ||| |||| || || |||||||||||||||| ||||||| |||||||    
T  24674465 gagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatggg 24674389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 213 - 284
Target Start/End: Complemental strand, 10059161 - 10059090
Alignment:
Q  213 ctctatatgaacttgcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacactc 284  Q
    |||| ||||||||||||||  ||||||||||| | ||||||| ||||||||||| |||||||| ||| ||||    
T  10059161 ctctgtatgaacttgcccatcgaaattgacattagagagaattaaacctgagactttgagaggagcaaactc 10059090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 117 - 314
Target Start/End: Original strand, 7766719 - 7766920
Alignment:
Q  117 ttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccg-tcatttgcggggg-cccgttctaagacagaacaagct 214  Q
    |||| ||||||||||| ||| || |||||| | |||||||| | | ||||||||||||||||  || ||||||||| ||||||  ||| |||| ||||||    
T  7766719 tttttttgaaaactcgatatccgattcaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagtcagagcaagct 7766818  T
Q  215 ctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacact-caaaattccaagccaaccactagcccaac 312  Q
    || |||| |||| |||||| ||||||  || || || ||||| |||||||||| |   |||| ||| ||| ||| || |||||| ||||||||| |||||    
T  7766819 ctgtatggacttagcccaccgaaattagcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagctaaccactaggccaac 7766918  T
Q  313 cc 314  Q
    ||    
T  7766919 cc 7766920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 322
Target Start/End: Original strand, 27454930 - 27455067
Alignment:
Q  187 gggggcccgttctaagacagaacaagctctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacactca 285  Q
    |||||||||||  ||| |||| |||||||| |||| |||| || ||| ||||||| ||||| || ||||| |||||||||| |   |||| ||| ||||     
T  27454930 gggggcccgtttaaagccagagcaagctctgtatggacttagctcaccgaaattggcatcagagtgaatcgaacctgagacctctggaggagcaaactcc 27455029  T
Q  286 aa-attccaagccaaccactagcccaaccctaaatggg 322  Q
    || || |||||||||||||||| ||||||| |||||||    
T  27455030 aagatcccaagccaaccactagaccaaccccaaatggg 27455067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 322
Target Start/End: Original strand, 40802056 - 40802268
Alignment:
Q  112 ttttcttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccgtc-atttgcgggggcccgttctaagacagaaca 210  Q
    |||| |||| || |||||||| |||||| |||||| | |||||||||| |  ||||||||| ||||  | | |||||||| ||||||  ||| |||| ||    
T  40802056 ttttttttttttaaaaactcggtattcgattcaagaatcgactaattctagaggaccaatctcaccacccacttgcggggacccgtttaaagtcagagca 40802155  T
Q  211 agctctatatgaacttgcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacact-caaaattccaagccaaccactagccc 309  Q
    |||||| |||| |||||| ||   |||||| || ||  ||||||||||| |||||| |||||| | ||| ||| ||| ||  |||||||||||| |  ||    
T  40802156 agctctgtatggacttgctcatcaaaattggcaccatggagaatcaaacatgagaccttgagatgagcaaactccaatatctcaagccaaccacaaagcc 40802255  T
Q  310 aaccctaaatggg 322  Q
    ||||| |||||||    
T  40802256 aaccccaaatggg 40802268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 233 - 320
Target Start/End: Complemental strand, 26608267 - 26608180
Alignment:
Q  233 tgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacactcaaaattccaagccaaccactagcccaaccctaaatg 320  Q
    ||||||||||||||  ||||||||||| |||||| |||||||| ||||| |  ||  |||||  |||||||||| ||||||| |||||    
T  26608267 tgaaattgacatcagggagaatcaaacatgagaccttgagaggagcacaattcaagatccaattcaaccactaggccaaccccaaatg 26608180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 322
Target Start/End: Complemental strand, 1379056 - 1378894
Alignment:
Q  163 gggaccaatcccaccgtc-atttgcgggggcccgttctaagacagaacaagctctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacc 260  Q
    |||||||||| ||||||| | |||||||||||||||  ||| |||| |||| ||| |||| |||| |||||| |||||||||| || ||  |||| |||     
T  1379056 gggaccaatctcaccgtccacttgcgggggcccgtttaaagccagagcaagttctgtatggacttagcccaccgaaattgacaccagaggaaatcgaaca 1378957  T
Q  261 tgagacattgagaggngcacact-caaaattccaagccaaccactagcccaaccctaaatggg 322  Q
    |||||| ||  |||| ||| ||| ||| || ||||| |||||||||  |||||| ||||||||    
T  1378956 tgagacttttggaggagcaaactccaagatcccaagtcaaccactaagccaaccttaaatggg 1378894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 210 - 284
Target Start/End: Original strand, 20907349 - 20907423
Alignment:
Q  210 aagctctatatgaacttgcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacactc 284  Q
    ||||||| |||| |||| ||||||||||||| || ||||| ||||  ||| |||||| |||||||| ||||||||    
T  20907349 aagctctgtatggacttacccactgaaattggcaccaaagtgaattgaacgtgagaccttgagaggagcacactc 20907423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 210 - 322
Target Start/End: Complemental strand, 1138688 - 1138575
Alignment:
Q  210 aagctctatatgaacttgcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacactcaaaattc-caagccaaccactagcc 308  Q
    ||||||| |||| ||||| |||| ||||||| ||  | ||||| || ||||| |||| |||||||| |||||||| ||  || |||||||||||||||      
T  1138688 aagctctgtatggacttgtccaccgaaattggcactagagagattcgaacctaagaccttgagaggagcacactccaagatctcaagccaaccactaggt 1138589  T
Q  309 caaccctaaatggg 322  Q
    |||||| |||||||    
T  1138588 caaccccaaatggg 1138575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 227 - 284
Target Start/End: Complemental strand, 39964604 - 39964547
Alignment:
Q  227 gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacactc 284  Q
    |||||| ||||||| || || || |||||||||||||||| |||||||| ||||||||    
T  39964604 gcccaccgaaattggcaccagagggaatcaaacctgagaccttgagaggagcacactc 39964547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 322
Target Start/End: Original strand, 7197347 - 7197447
Alignment:
Q  223 acttgcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacactcaaa-attccaagccaaccactagcccaaccctaaatgg 321  Q
    |||| ||||| ||||||| ||||| || ||||| |||||||||| |   |||| ||| |||| || || |||||||||||||||| ||||||| ||||||    
T  7197347 acttacccaccgaaattggcatcagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 7197446  T
Q  322 g 322  Q
    |    
T  7197447 g 7197447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 271
Target Start/End: Original strand, 40397365 - 40397422
Alignment:
Q  214 tctatatgaacttgcccactgaaattgacatcaaagagaatcaaacctgagacattga 271  Q
    |||||||| |||||||||  |||||||||| ||| | |||||||||||||||| ||||    
T  40397365 tctatatggacttgcccatcgaaattgacaccaaggggaatcaaacctgagaccttga 40397422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 144 - 240
Target Start/End: Original strand, 1095023 - 1095121
Alignment:
Q  144 aaggaccgactaattcaatgggaccaatcccaccgtcatttgcgggggcccgttctaagacagaac----aagctctatatgaacttgcccactgaaatt 239  Q
    |||||||||||||| | | || ||||||||||||  || |||||||| ||||||||||| |||| |    ||||||| |||| |||||||||| ||||||    
T  1095023 aaggaccgactaatccgagggaaccaatcccacc--cacttgcggggccccgttctaagccagagctgcaaagctctgtatgtacttgcccaccgaaatt 1095120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 4e-24; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 111 - 322
Target Start/End: Original strand, 40058838 - 40059053
Alignment:
Q  111 tttttcttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccg-tcatttgcggggg-cccgttctaagacagaa 208  Q
    ||||| |||||||||||||||| ||| || | |||| | |||||||| | | ||||||||||||||||  || ||||||||| ||||||  ||| ||||     
T  40058838 ttttttttttgttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagag 40058937  T
Q  209 caagctctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacact-caaaattccaagccaaccactag 306  Q
    |||||||| |||| |||| |||||| ||||||| || || |||||||| |||||||||| |  ||||| ||| ||| ||| || ||||||||||||||||    
T  40058938 caagctctgtatggacttagcccaccgaaattggcaccagagagaatcgaacctgagacctctagaggagcaaactccaagatcccaagccaaccactag 40059037  T
Q  307 cccaaccctaaatggg 322  Q
     ||||||| |||||||    
T  40059038 gccaaccccaaatggg 40059053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 117 - 320
Target Start/End: Original strand, 45787696 - 45787902
Alignment:
Q  117 ttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccgt-catttgcgggggccc-gttctaagacagaacaagct 214  Q
    |||| ||||||||||| ||| || | |||| | |||||||||| | ||||||||||||||||| || |||||||||||| |||  ||| |||| ||||||    
T  45787696 tttttttgaaaactcggtatccgatccaagaatcgactaattcgaggggaccaatcccaccgtccacttgcgggggccctgtttaaagccagagcaagct 45787795  T
Q  215 ctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacactcaaaattccaagccaaccactagcccaacc 313  Q
    || |||| |||| |||||||||||||| ||||| || ||||| |||||||||  |   |||| ||| |  ||| ||||||||||||||||||| ||||||    
T  45787796 ctgtatggacttagcccactgaaattggcatcagagggaatcgaacctgagatctctggaggagcaaatccaagattccaagccaaccactaggccaacc 45787895  T
Q  314 ctaaatg 320  Q
    | |||||    
T  45787896 ccaaatg 45787902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 147 - 319
Target Start/End: Original strand, 9646238 - 9646414
Alignment:
Q  147 gaccgactaattcaatgggaccaatcccaccgtc-atttgcgggggcccg-ttctaagacagaacaa-gctctatatgaacttgcccactgaaattgaca 243  Q
    ||||||||||| | | |||| ||||||||| | | | |||||| |||||| ||||||| |||| ||| || || |||||||||||||| |||||||| ||    
T  9646238 gaccgactaatccgaggggatcaatcccactgcccacttgcggtggcccggttctaagccagagcaaagcactgtatgaacttgcccattgaaattgtca 9646337  T
Q  244 tcaaagagaatcaaacctgagacattgagaggngcacactcaaa-attccaagccaaccactagcccaaccctaaat 319  Q
    ||| |||||||||||| |||||| |||| ||| ||||||||||| || |||| ||||||||||| ||||||| ||||    
T  9646338 tcagagagaatcaaacatgagaccttgacaggagcacactcaaagatcccaaaccaaccactagaccaaccccaaat 9646414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 108 - 322
Target Start/End: Original strand, 34844741 - 34844959
Alignment:
Q  108 cactttttcttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccg-tcatttgcggggg-cccgttctaagaca 205  Q
    |||||||| |||| ||||||||||| ||| || | |||| | |||||||| | | ||||||||||||||||  || ||||||||| ||||||  ||| ||    
T  34844741 cactttttttttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagcca 34844840  T
Q  206 gaacaagctctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacact-caaaattccaagccaaccac 303  Q
    || |||||||| |||| |||| |||||| ||||||| || || |||||||| |||||||||| |   |||| ||| ||| ||| ||  ||||| ||||||    
T  34844841 gagcaagctctgtatggacttagcccaccgaaattggcaccagagagaatcgaacctgagacctctggaggagcaaactccaagatctcaagcaaaccac 34844940  T
Q  304 tagcccaaccctaaatggg 322  Q
    ||| ||||||| |||||||    
T  34844941 taggccaaccccaaatggg 34844959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 111 - 322
Target Start/End: Original strand, 54127328 - 54127543
Alignment:
Q  111 tttttcttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccg-tcatttgcggggg-cccgttctaagacagaa 208  Q
    ||||| |||| ||||||||||  ||| |||| |||| |||||||||| | | ||||||||||||||||  || ||||||||| ||||||  ||| ||||     
T  54127328 tttttttttttttgaaaactcagtatccggtccaagaaccgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagag 54127427  T
Q  209 caagctctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacact-caaaattccaagccaaccactag 306  Q
    |||||||| |||  |||| |||||| ||||||| ||  | || ||||  |||||||||| ||  |||| ||| ||| ||| || ||||||||||||||||    
T  54127428 caagctctgtatagacttagcccaccgaaattggcacaagagggaattgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactag 54127527  T
Q  307 cccaaccctaaatggg 322  Q
     ||||||| |||||||    
T  54127528 gccaaccccaaatggg 54127543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 112 - 322
Target Start/End: Original strand, 19660519 - 19660733
Alignment:
Q  112 ttttcttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccgtc-atttgcgggggccc-gttctaagacagaac 209  Q
    |||| |||| ||||||||||| ||| || | |||| | |||||||| | | |||| ||||||||||| | | |||||||||||| |||  ||| |||| |    
T  19660519 ttttttttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggatcaatcccaccgcccacttgcgggggccctgtttaaagccagagc 19660618  T
Q  210 aagctctatatgaacttg-cccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacact-caaaattccaagccaaccactagc 307  Q
    ||||||| |||| ||||  ||||| ||||||  ||||| ||||||||||||||||||| |   |||| ||| ||| ||| || ||||||||||||||||     
T  19660619 aagctctgtatggacttatcccaccgaaatttgcatcagagagaatcaaacctgagacctctggaggagcaaactccaagatcccaagccaaccactagg 19660718  T
Q  308 ccaaccctaaatggg 322  Q
    ||||| | |||||||    
T  19660719 ccaactccaaatggg 19660733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 111 - 322
Target Start/End: Original strand, 5609188 - 5609403
Alignment:
Q  111 tttttcttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccgt-catttgcggggg-cccgttctaagacagaa 208  Q
    ||||| |||| ||||||||||| ||| || | |||| | |||||||| | | |||| |||||||||||| || ||||||||| ||| ||  ||| ||||     
T  5609188 tttttttttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggatcaatcccaccgtccacttgcgggggccccatttaaagccagag 5609287  T
Q  209 caagctctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgaga-cattgagaggngcacact-caaaattccaagccaaccacta 305  Q
    |||||||| |||| |||| |||||| ||||||| || || |||||||| ||||||||| || ||| | | ||| ||| ||| || |||||||||||||||    
T  5609288 caagctctgtatggacttagcccaccgaaattggcaccagagagaatcgaacctgagaccactga-atgagcaaactccaagatcccaagccaaccacta 5609386  T
Q  306 gcccaaccctaaatggg 322  Q
    | ||||||| |||||||    
T  5609387 ggccaaccccaaatggg 5609403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 126 - 322
Target Start/End: Complemental strand, 52983815 - 52983615
Alignment:
Q  126 aaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccgtc-atttgcgggggccc-gttctaagacagaacaagctctatatgaa 223  Q
    ||||||| ||| || | |||| | |||||||| | | |||||||||||||||| | | |||||||||||| |||  ||| |||| |||||||| |||| |    
T  52983815 aaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatgga 52983716  T
Q  224 ctt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacact-caaaattccaagccaaccactagcccaaccctaaatgg 321  Q
    ||| |||||||||||||| || || || ||||| |||||||||| |   |||| ||| ||| ||| ||  ||||||||||||||| ||||||| ||||||    
T  52983715 cttagcccactgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatctcaagccaaccactaggccaaccccaaatgg 52983616  T
Q  322 g 322  Q
    |    
T  52983615 g 52983615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 112 - 322
Target Start/End: Complemental strand, 25852425 - 25852210
Alignment:
Q  112 ttttcttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccgtc-atttgcggggg-cccgttctaa-gacagaa 208  Q
    |||| |||| || |||||||| ||| |||| |||| |||||||||| | | |||||||||||||  | | | ||||| ||| |||||| ||| | ||||     
T  25852425 tttttttttttttaaaactcggtatccggtccaagaaccgactaatccgaggggaccaatcccattgcccacttgcgagggtcccgttttaaagccagag 25852326  T
Q  209 caagctctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacactcaaa-attccaagccaaccactag 306  Q
    |||||||| |||| |||| |||||| ||||||| || || || ||||| |||||||||| ||  |||| ||| |||| || || ||||||||||||||||    
T  25852325 caagctctgtatggacttagcccaccgaaattggcaccagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactag 25852226  T
Q  307 cccaaccctaaatggg 322  Q
     ||||||| |||||||    
T  25852225 gccaaccccaaatggg 25852210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 117 - 226
Target Start/End: Original strand, 22488020 - 22488131
Alignment:
Q  117 ttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccg-tcatttgcggggg-cccgttctaagacagaacaagct 214  Q
    |||| ||||||||| | ||| || | ||||||||||||||||  | |||| |||||||||||  |||||||||||| ||||||  ||| |||||||||||    
T  22488020 tttttttgaaaacttggtatccgatccaaggaccgactaatttgaggggatcaatcccaccgcccatttgcgggggccccgtttaaagccagaacaagct 22488119  T
Q  215 ctatatgaactt 226  Q
    ||||||| ||||    
T  22488120 ctatatggactt 22488131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 246
Target Start/End: Complemental strand, 39288986 - 39288932
Alignment:
Q  192 cccgttctaagacagaacaagctctatatgaacttgcccactgaaattgacatca 246  Q
    ||||||||||| |||| |||||||| |||| |||||||||| |||||||||||||    
T  39288986 cccgttctaagccagagcaagctctgtatggacttgcccaccgaaattgacatca 39288932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 122 - 313
Target Start/End: Original strand, 13584251 - 13584446
Alignment:
Q  122 ttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccg-tcatttgcg-ggggcccgttctaagacagaacaagctctata 219  Q
    ||||||||||  |||||| |||||| |||||||||||| | | ||||||| |||||| ||||||| | ||| ||||||  ||| |||| |||||||| ||    
T  13584251 ttgaaaactcagtattcgattcaagaaccgactaattcgaggagaccaattccaccgctcatttgtgagggccccgtttaaagccagagcaagctctcta 13584350  T
Q  220 tgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacact-caaaattccaagccaaccactagcccaacc 313  Q
    || |||| |||||  |||||||||| || || ||||| ||| |||||| ||  |||| ||| ||| ||| ||  || |||||||||||| ||||||    
T  13584351 tggacttagcccatcgaaattgacaccagagggaatcgaacttgagacttttggaggagcaaactccaatatctcaggccaaccactaggccaacc 13584446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 111 - 322
Target Start/End: Complemental strand, 32986408 - 32986193
Alignment:
Q  111 tttttcttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccgtc-atttgcgggggcccgttctaa-gacagaa 208  Q
    ||||| |||| ||||||||||| ||| || | |||| | |||||| | | | |||||||||||||||| | | ||||||||||||  | ||| | ||||     
T  32986408 tttttttttttttgaaaactcggtatccgatccaagaatcgactattccgaggggaccaatcccaccgcccacttgcgggggccccatttaaagtcagag 32986309  T
Q  209 caagctctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacactcaaa-attccaagccaaccactag 306  Q
    |||||||| |||| |||| |||||| ||||||| || || || ||||  |||||||||| |   |||| ||| |||| || || ||||||||||||||||    
T  32986308 caagctctgtatggacttagcccaccgaaattggcaccagagggaattgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactag 32986209  T
Q  307 cccaaccctaaatggg 322  Q
     ||||||| |||||||    
T  32986208 gccaaccccaaatggg 32986193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 249 - 284
Target Start/End: Original strand, 4686126 - 4686161
Alignment:
Q  249 gagaatcaaacctgagacattgagaggngcacactc 284  Q
    ||||||||||||||||||||||||||| ||||||||    
T  4686126 gagaatcaaacctgagacattgagaggagcacactc 4686161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 229 - 284
Target Start/End: Original strand, 48896537 - 48896592
Alignment:
Q  229 ccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacactc 284  Q
    |||| ||||||||||||||| |||||||||||||| || |||||||  ||||||||    
T  48896537 ccaccgaaattgacatcaaatagaatcaaacctgatactttgagagcagcacactc 48896592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 265
Target Start/End: Original strand, 18875580 - 18875659
Alignment:
Q  187 gggggcccgttctaagacagaacaagctctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgaga 265  Q
    |||||||||||  ||| |||| |||||||| |||| |||| |||||| ||||||||||||| || ||||| |||||||||    
T  18875580 gggggcccgtttaaagccagagcaagctctgtatggacttagcccaccgaaattgacatcagagggaatcgaacctgaga 18875659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 266
Target Start/End: Complemental strand, 32990646 - 32990488
Alignment:
Q  111 tttttcttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccg-tcatttgcggggg-cccgttctaagacagaa 208  Q
    ||||| |||| ||||||||||  |||||| | |||| | |||||| | | | ||||||||||||||||  || ||||||||| ||||||  ||| ||||     
T  32990646 tttttttttttttgaaaactcagtattcgatccaagaatcgactagtccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagag 32990547  T
Q  209 caagctctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagac 266  Q
    |||||||| |||| |||| |||||| ||||||| ||  |||| ||||| ||||||||||    
T  32990546 caagctctgtatggacttagcccaccgaaattggcactaaagggaatcgaacctgagac 32990488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 320
Target Start/End: Complemental strand, 34835621 - 34835527
Alignment:
Q  227 gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacactcaaa-attccaagccaaccactagcccaaccctaaatg 320  Q
    |||||| |||||||||| || || ||||| ||| |||||| || ||||| ||| |||| || || |||||||||||||||| ||||||| |||||    
T  34835621 gcccaccgaaattgacaccagagggaatcgaacatgagaccttaagaggagcaaactctaagatcccaagccaaccactagaccaaccccaaatg 34835527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 178
Target Start/End: Complemental strand, 44343724 - 44343658
Alignment:
Q  112 ttttcttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccg 178  Q
    |||| |||| ||||||||||| ||| || |||||| | |||||||||| | ||||||||||||||||    
T  44343724 ttttttttttttgaaaactcggtatccgattcaagaatcgactaattcgaggggaccaatcccaccg 44343658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 125 - 178
Target Start/End: Complemental strand, 7093568 - 7093515
Alignment:
Q  125 aaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccg 178  Q
    |||||||| ||| || | ||||||||||||||||| | ||||||||||||||||    
T  7093568 aaaactcgatatccgatccaaggaccgactaattcgaagggaccaatcccaccg 7093515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 218 - 302
Target Start/End: Complemental strand, 13017830 - 13017745
Alignment:
Q  218 tatgaacttgcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacac-tcaaaattccaagccaacca 302  Q
    |||||||||||||||  |||||| || || || ||||  |||||||||| ||||||||  ||||| |||| |||||||||||||||    
T  13017830 tatgaacttgcccaccaaaattggcaacagagggaatggaacctgagaccttgagaggaacacacttcaagattccaagccaacca 13017745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 19747254 - 19747208
Alignment:
Q  229 ccactgaaattgacatcaaagagaatcaaacctgagacattgagagg 275  Q
    ||||||||||||||||||| || |||||||||||| | |||||||||    
T  19747254 ccactgaaattgacatcaaggaaaatcaaacctgatagattgagagg 19747208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 229 - 275
Target Start/End: Original strand, 19792552 - 19792598
Alignment:
Q  229 ccactgaaattgacatcaaagagaatcaaacctgagacattgagagg 275  Q
    ||||||||||||||||||| || |||||||||||| | |||||||||    
T  19792552 ccactgaaattgacatcaaggaaaatcaaacctgatagattgagagg 19792598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 141 - 265
Target Start/End: Original strand, 47464124 - 47464250
Alignment:
Q  141 ttcaaggaccgactaattcaatgggaccaatcccaccgt-catttgcgggggcccgttctaagacagaac-aagctctatatgaacttgcccactgaaat 238  Q
    |||||||||||||||||| || | ||||||| ||||||| || |||||||| |||| |||||| || ||| || |||| |||| |||| ||| |  ||||    
T  47464124 ttcaaggaccgactaatttaaggagaccaattccaccgtccacttgcggggccccgctctaagccataacaaaactctgtatggacttaccctccaaaat 47464223  T
Q  239 tgacatcaaagagaatcaaacctgaga 265  Q
    || ||||| || ||||||||| |||||    
T  47464224 tggcatcagagggaatcaaacatgaga 47464250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 314
Target Start/End: Original strand, 27528781 - 27528988
Alignment:
Q  111 tttttcttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccg-tcatttgcggggg-cccgttctaagacagaa 208  Q
    ||||| |||| ||||||||||| ||| || | |||| | |||||||| | | |||||||||| |||||  || ||||||||| |||||   ||| ||||     
T  27528781 tttttatttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatctcaccgcccacttgcgggggccccgtataaagccagag 27528880  T
Q  209 caagctctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacact-caaaattccaagccaaccactag 306  Q
    |||||||| |||| |||| |||||| ||||||| || || || ||||| |||||||||| |   |||| ||| ||| ||| || |||||||||||||||     
T  27528881 caagctctgtatggacttagcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaa 27528980  T
Q  307 cccaaccc 314  Q
     |||||||    
T  27528981 gccaaccc 27528988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 322
Target Start/End: Original strand, 33696360 - 33696480
Alignment:
Q  204 cagaacaagctctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacactcaaa-attccaagccaacc 301  Q
    |||| |||||||| |||| |||| |||||| ||||||| || || || ||||  |||||||||| |   |||| ||| |||| || || |||||||||||    
T  33696360 cagagcaagctctgtatggacttagcccaccgaaattggcaccagagggaattgaacctgagacctctggaggagcaaactccaagatcccaagccaacc 33696459  T
Q  302 actagcccaaccctaaatggg 322  Q
    ||||| |||||||||||||||    
T  33696460 actaggccaaccctaaatggg 33696480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 45692202 - 45692253
Alignment:
Q  227 gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngca 279  Q
    ||||||| |||||||||||||| |||||| ||||||| ||||||||||| |||    
T  45692202 gcccactaaaattgacatcaaa-agaatcgaacctgaaacattgagaggagca 45692253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 187 - 266
Target Start/End: Original strand, 9517705 - 9517785
Alignment:
Q  187 gggggcccgttctaagacagaacaagctctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagac 266  Q
    |||| ||||||  ||| |||| |||||||| |||| |||| |||||||||||||| || || |||||||| ||||||||||    
T  9517705 ggggccccgtttaaagtcagagcaagctctgtatggacttagcccactgaaattggcaccagagagaatcgaacctgagac 9517785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 249 - 284
Target Start/End: Original strand, 25414213 - 25414248
Alignment:
Q  249 gagaatcaaacctgagacattgagaggngcacactc 284  Q
    |||||||||||||||||| |||||||| ||||||||    
T  25414213 gagaatcaaacctgagactttgagaggagcacactc 25414248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 141 - 240
Target Start/End: Original strand, 25969519 - 25969618
Alignment:
Q  141 ttcaaggaccgactaattcaatgggaccaatcccaccg-tcatttgcgggggcccgttctaagacagaacaagctctatatgaacttgcccactgaaatt 239  Q
    |||||| | |||||||||| | |||||||||||||||| ||| || ||||||||||||  ||| |||| |||| ||| |||| ||||| |||| ||||||    
T  25969519 ttcaagaatcgactaattcga-gggaccaatcccaccgctcacttacgggggcccgtttaaagccagagcaagttctgtatggacttggccaccgaaatt 25969617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 2e-23; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 204 - 322
Target Start/End: Original strand, 26168930 - 26169049
Alignment:
Q  204 cagaacaagctctatatgaacttgcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacact-caaaattccaagccaacca 302  Q
    ||||||||||||| ||||||||||||||| ||||||| |||||    |||||||||||||||| |||||||| ||| ||| ||| || |||||| |||||    
T  26168930 cagaacaagctctgtatgaacttgcccaccgaaattggcatcaggaggaatcaaacctgagaccttgagaggagcaaactccaagatcccaagcaaacca 26169029  T
Q  303 ctagcccaaccctaaatggg 322  Q
    |||| |||||||||||||||    
T  26169030 ctaggccaaccctaaatggg 26169049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 111 - 322
Target Start/End: Original strand, 34237641 - 34237856
Alignment:
Q  111 tttttcttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccg-tcatttgcggggg-cccgttctaagacagaa 208  Q
    ||||| |||| ||||||||||| ||| || | |||| | |||||||| | | |||||||||||||||| ||| ||||||||| ||||||  ||| ||||     
T  34237641 tttttttttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgctcacttgcgggggccccgtttaaagccagag 34237740  T
Q  209 caagctctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacact-caaaattccaagccaaccactag 306  Q
    |||||||| |||| |||| |||||| ||||||| || || || ||||| |||||||||| |   |||| ||| ||| ||| || ||||||||||||||||    
T  34237741 caagctctgtatggacttagcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactag 34237840  T
Q  307 cccaaccctaaatggg 322  Q
     ||||||| |||||||    
T  34237841 gccaaccccaaatggg 34237856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 141 - 321
Target Start/End: Original strand, 34639224 - 34639406
Alignment:
Q  141 ttcaaggaccgactaattcaatgggaccaatcccaccgt-catttgcgggggcccgttctaagacagaac-aagctctatatgaacttgcccactgaaat 238  Q
    |||||||||||| |||||| | ||||||||||| ||||| || |||| | ||||||||||||| |||| | ||||||| |||| |||| ||||| |||||    
T  34639224 ttcaaggaccgattaattcgaagggaccaatcctaccgtccacttgcagaggcccgttctaagccagagcaaagctctgtatggacttacccaccgaaat 34639323  T
Q  239 tgacatcaaagagaatcaaacctgagacattgagaggngcacact-caaaattccaagccaaccactagcccaaccctaaatgg 321  Q
    || || || || | ||| | |||||||| |||||||| ||||||| ||| || |||||||||||||||| | ||||| ||||||    
T  34639324 tggcaccagag-ggatcgagcctgagaccttgagaggagcacactccaagatcccaagccaaccactagactaaccccaaatgg 34639406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 117 - 322
Target Start/End: Original strand, 3734615 - 3734824
Alignment:
Q  117 ttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccgtc-atttgcgggggccc-gttctaagacagaacaagct 214  Q
    |||| ||||||||||| ||| || | |||| | |||||||| | | |||||||||||||| | | |||||||||||||| |||  ||| |||| ||||||    
T  3734615 tttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccactgcccatttgcgggggccccgtttaaagccagagcaagct 3734714  T
Q  215 ctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacactcaaa-attccaagccaaccactagcccaac 312  Q
    || |||| |||| |||||| ||||||| || || || ||||| |||||||||| ||  |||| ||| |||| || || |||||||||||||||| |||||    
T  3734715 ctgtatggacttagcccaccgaaattggcaccagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaac 3734814  T
Q  313 cctaaatggg 322  Q
    || |||||||    
T  3734815 cccaaatggg 3734824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 187 - 314
Target Start/End: Complemental strand, 41070898 - 41070769
Alignment:
Q  187 gggggcccgttctaagacagaacaa-gctctatatgaacttgcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacact-c 284  Q
    |||||||||||||||| ||||  || ||| | ||||||||||||||| |||||||||| ||||| ||||| ||| |||||| |||||||  ||||||| |    
T  41070898 gggggcccgttctaagccagagtaaagctatgtatgaacttgcccaccgaaattgacaccaaagggaatcgaacttgagaccttgagagtagcacactcc 41070799  T
Q  285 aaaattccaagccaaccactagcccaaccc 314  Q
    || || ||||| |||||||||| |||||||    
T  41070798 aagatcccaagtcaaccactaggccaaccc 41070769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 117 - 322
Target Start/End: Complemental strand, 20306117 - 20305908
Alignment:
Q  117 ttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccg-tcatttgcggggg-cccgttctaagacagaacaagct 214  Q
    |||| ||||||||||| ||| || | |||||| |||||||||| | ||||||||||||||||  || ||||||||| ||||||  ||| |||| ||||||    
T  20306117 tttttttgaaaactcggtatccgatccaaggatcgactaattcgaggggaccaatcccaccgcccacttgcgggggtcccgtttaaagccagagcaagct 20306018  T
Q  215 ctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacactc-aaaattccaagccaaccactagcccaac 312  Q
    || |||| |||| |||||  ||||||| || || |  ||||| || ||||||| ||  |||| ||| |||| || || |||||||||||||||| |||||    
T  20306017 ctgtatggacttagcccatcgaaattggcaccagaaggaatcgaaactgagacctttggaggagcaaactctaagatcccaagccaaccactaggccaac 20305918  T
Q  313 cctaaatggg 322  Q
    || |||||||    
T  20305917 cccaaatggg 20305908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 117 - 322
Target Start/End: Complemental strand, 21092750 - 21092541
Alignment:
Q  117 ttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccg-tcatttgcggggg-cccgttctaagacagaacaagct 214  Q
    |||| ||||||||||| ||| || | |||||| |||||||||| | ||||||||||||||||  || ||||||||| ||||||  ||| |||| ||||||    
T  21092750 tttttttgaaaactcggtatccgatccaaggatcgactaattcgaggggaccaatcccaccgcccacttgcgggggtcccgtttaaagccagagcaagct 21092651  T
Q  215 ctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacactc-aaaattccaagccaaccactagcccaac 312  Q
    || |||| |||| |||||  ||||||| || || |  ||||| || ||||||| ||  |||| ||| |||| || || |||||||||||||||| |||||    
T  21092650 ctgtatggacttagcccatcgaaattggcaccagaaggaatcgaaactgagacctttggaggagcaaactctaagatcccaagccaaccactaggccaac 21092551  T
Q  313 cctaaatggg 322  Q
    || |||||||    
T  21092550 cccaaatggg 21092541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 117 - 319
Target Start/End: Complemental strand, 24018592 - 24018385
Alignment:
Q  117 ttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccg-tcatttgcggg--ggcccgttctaagacagaacaagc 213  Q
    |||| ||||||||||| ||| |||| |||| |||||||||||||| |||||||||| |||||  || ||| |||  ||||||||  ||| |||| |||||    
T  24018592 tttttttgaaaactcgatatccggtccaagaaccgactaattcaaggggaccaatctcaccgcccacttgtggggaggcccgtttaaagccagagcaagc 24018493  T
Q  214 tctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacact-caaaattccaagccaaccactagcccaa 311  Q
    ||| |||| |||| |||||||||||||||||| | ||  |||| ||||| |||| ||  |||| ||| ||| ||| || ||||| ||||||||||  |||    
T  24018492 tctgtatggacttagcccactgaaattgacattagaggaaatcgaacctcagacctttggaggagcaaactccaagatcccaagtcaaccactagatcaa 24018393  T
Q  312 ccctaaat 319  Q
    ||| ||||    
T  24018392 ccccaaat 24018385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 117 - 322
Target Start/End: Complemental strand, 4718854 - 4718645
Alignment:
Q  117 ttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccg-tcatttgcggggg-cccgttctaagacagaacaagct 214  Q
    |||| ||||||||||| ||| || | |||| | |||||||| | | ||||||||||||||||  || ||||||||| ||||||  ||| |||| ||||||    
T  4718854 tttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagct 4718755  T
Q  215 ctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacat-tgagaggngcacact-caaaattccaagccaaccactagcccaa 311  Q
    || |||| |||| |||||| ||||||| || || || ||||| |||||||||| | ||| ||| ||| ||| ||| || |||||||||||||||| ||||    
T  4718754 ctgtatggacttagcccaccgaaattggcaccagagggaatcgaacctgagacctctga-aggagcaaactccaagatcccaagccaaccactaggccaa 4718656  T
Q  312 ccctaaatggg 322  Q
    ||| |||||||    
T  4718655 ccccaaatggg 4718645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 111 - 322
Target Start/End: Complemental strand, 19542749 - 19542533
Alignment:
Q  111 tttttcttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccg-tcatttgcggggg--cccgttctaagacaga 207  Q
    ||||| |||| ||||||||||| ||| || | |||| | |||||||||| | ||||||||||||| ||  || |||||||||  ||||||  ||| ||||    
T  19542749 tttttttttttttgaaaactcggtatccgatccaagtatcgactaattcgaggggaccaatcccatcgcccacttgcggggggccccgtttaaagccaga 19542650  T
Q  208 acaagctctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacact-caaaattccaagccaaccacta 305  Q
     |||||||| |||| |||| || |||  |||||| || || || |||||||||||||||| |   |||| ||| ||| ||| || |||||||||||||||    
T  19542649 gcaagctctgtatggacttagctcaccaaaattggcaccagagggaatcaaacctgagacctctggaggagcaaactccaagatcccaagccaaccacta 19542550  T
Q  306 gcccaaccctaaatggg 322  Q
    | ||||||| |||||||    
T  19542549 ggccaaccccaaatggg 19542533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 111 - 322
Target Start/End: Original strand, 19589947 - 19590163
Alignment:
Q  111 tttttcttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccg-tcatttgcggggg--cccgttctaagacaga 207  Q
    ||||| |||| ||||||||||| ||| || | |||| | |||||||||| | ||||||||||||| ||  || |||||||||  ||||||  ||| ||||    
T  19589947 tttttttttttttgaaaactcggtatccgatccaagtatcgactaattcgaggggaccaatcccatcgcccacttgcggggggccccgtttaaagccaga 19590046  T
Q  208 acaagctctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacact-caaaattccaagccaaccacta 305  Q
     |||||||| |||| |||| || |||  |||||| || || || |||||||||||||||| |   |||| ||| ||| ||| || |||||||||||||||    
T  19590047 gcaagctctgtatggacttagctcaccaaaattggcaccagagggaatcaaacctgagacctctggaggagcaaactccaagatcccaagccaaccacta 19590146  T
Q  306 gcccaaccctaaatggg 322  Q
    | ||||||| |||||||    
T  19590147 ggccaaccccaaatggg 19590163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 112 - 322
Target Start/End: Complemental strand, 19471824 - 19471609
Alignment:
Q  112 ttttcttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccg-tcatttgcggggg--cccgttctaagacagaa 208  Q
    |||| |||| ||||||||||| ||| || | |||| | |||||||||| | ||||||||||||| ||  || |||||||||  ||||||  ||| ||||     
T  19471824 ttttttttttttgaaaactcggtatccgatccaagtatcgactaattcgaggggaccaatcccatcgcccacttgcggggggccccgtttaaagccagag 19471725  T
Q  209 caagctctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacact-caaaattccaagccaaccactag 306  Q
    |||||||| |||| |||| || |||  |||||| || || || |||||||||||||||| |   |||| ||| ||| ||| || ||||||||||||||||    
T  19471724 caagctctgtatggacttagctcaccaaaattggcaccagagggaatcaaacctgagacctctggaggagcaaactccaagatcccaagccaaccactag 19471625  T
Q  307 cccaaccctaaatggg 322  Q
     ||||||| |||||||    
T  19471624 gccaaccccaaatggg 19471609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 111 - 322
Target Start/End: Complemental strand, 2618401 - 2618186
Alignment:
Q  111 tttttcttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccg-tcatttgcgggggc-ccgttctaagacagaa 208  Q
    ||||| |||| |||||||||||  || || | |||| | |||||||| | | ||||||||||||||||  || |||||||||| |||||  ||| ||||     
T  2618401 tttttttttttttgaaaactcggaatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggctccgtttaaagccagag 2618302  T
Q  209 caagctctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacact-caaaattccaagccaaccactag 306  Q
    |||||||| |||| |||| |||||||||||||| || || || ||||| ||||  |||| |   |||| ||| ||| ||| || ||||||||||||||||    
T  2618301 caagctctgtatggacttagcccactgaaattggcaccagagggaatcgaacccaagacctctggaggagcaaactccaagatcccaagccaaccactag 2618202  T
Q  307 cccaaccctaaatggg 322  Q
     ||||||| |||||||    
T  2618201 gccaaccccaaatggg 2618186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 210 - 312
Target Start/End: Complemental strand, 28908936 - 28908831
Alignment:
Q  210 aagctctatatgaacttgcccactgaaattgacatcaaagagaatcaaacctgagaca--ttgagaggngcacact-caaaattccaagccaaccactag 306  Q
    ||||||| |||| |||||||||||| |||||||| || || ||||  ||||||| |||  |||||||| ||| ||| ||||||||||| |||||||||||    
T  28908936 aagctctgtatggacttgcccactgtaattgacaccagagggaattgaacctgaaacaccttgagaggagcaaactccaaaattccaaaccaaccactag 28908837  T
Q  307 cccaac 312  Q
     |||||    
T  28908836 accaac 28908831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 117 - 322
Target Start/End: Complemental strand, 42328213 - 42328005
Alignment:
Q  117 ttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccgt-catttgcggggg-cccgttctaagacagaacaagct 214  Q
    |||| ||||||||||| ||| || | |||| | |||||||||| | ||||||||||||| ||| || ||| ||||| ||||||  ||| |||| ||||||    
T  42328213 tttttttgaaaactcggtatccgatccaagaatcgactaattcgaggggaccaatcccatcgtccacttgtgggggccccgtttaaagccagagcaagct 42328114  T
Q  215 ctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacact-caaaattccaagccaaccactagcccaac 312  Q
    || |||| |||| |||||| ||||||| || || || ||||||||||||| || |   |||| | | ||| ||| || |||||||||||||||| |||||    
T  42328113 ctgtatggacttagcccaccgaaattggcaacagagggaatcaaacctgacacctctggaggag-aaactccaagatcccaagccaaccactaggccaac 42328015  T
Q  313 cctaaatggg 322  Q
    || |||||||    
T  42328014 cccaaatggg 42328005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 204 - 321
Target Start/End: Original strand, 27746416 - 27746535
Alignment:
Q  204 cagaacaagctctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacactcaaa-attccaagccaacc 301  Q
    |||| |||||||| |||| |||| |||||| ||||||| || ||||| ||||| |||||||||| ||  |||| ||| |||| || || |||| ||||||    
T  27746416 cagagcaagctctgtatggacttagcccaccgaaattggcaccaaagggaatcgaacctgagacctttggaggagcaaactccaagatcccaaaccaacc 27746515  T
Q  302 actagcccaaccctaaatgg 321  Q
    ||||| ||||||| ||||||    
T  27746516 actaggccaaccccaaatgg 27746535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 111 - 239
Target Start/End: Complemental strand, 33747097 - 33746966
Alignment:
Q  111 tttttcttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccgt-catttgcgggggc-ccgttctaagacagaa 208  Q
    ||||| |||| ||||||||||| ||| || | |||||| |||||||| | |  | |||||| ||||||| || |||||||||| |||||||||  |||||    
T  33747097 tttttttttttttgaaaactcggtatccgatccaaggatcgactaatccgagagaaccaattccaccgtccacttgcgggggctccgttctaaaccagaa 33746998  T
Q  209 c-aagctctatatgaacttgcccactgaaatt 239  Q
    | ||||| |||||||| |||||||| ||||||    
T  33746997 caaagctttatatgaatttgcccaccgaaatt 33746966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 117 - 322
Target Start/End: Complemental strand, 39349465 - 39349256
Alignment:
Q  117 ttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccgtc-atttgcgggggccc-gttctaagacagaacaagct 214  Q
    |||| ||||||||| | ||| || | |||| | |||||||| | | |||| ||||||||||| | | |||||||||||| |||  ||| |||| ||||||    
T  39349465 tttttttgaaaacttggtatccgatccaagaatcgactaatccgaggggatcaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagct 39349366  T
Q  215 ctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacactcaaa-attccaagccaaccactagcccaac 312  Q
    || |||| |||| |||||| ||||||| || || || ||||| |||||||||| |   |||| ||| |||| || || |||||||||||||| | |||||    
T  39349365 ctgtatggacttagcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactgggccaac 39349266  T
Q  313 cctaaatggg 322  Q
    || |||||||    
T  39349265 cccaaatggg 39349256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 210 - 318
Target Start/End: Original strand, 35653425 - 35653534
Alignment:
Q  210 aagctctatatgaacttgcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacactcaaaattc-caagccaaccactagcc 308  Q
    ||||||| ||||||| |||| ||  |||||| || ||||  || ||||||| ||||| || ||| | |||||||| ||| || ||||||||||| |||||    
T  35653425 aagctctgtatgaacatgcctaccaaaattggcaccaaaaggagtcaaacccgagaccttaagatgagcacactctaaaatctcaagccaaccattagcc 35653524  T
Q  309 caaccctaaa 318  Q
    ||||||||||    
T  35653525 caaccctaaa 35653534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 266
Target Start/End: Original strand, 6953008 - 6953151
Alignment:
Q  125 aaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccgtc-atttgcgggggccc-gttctaagacagaacaagctctatatga 222  Q
    |||||||| |||||| | |||| | |||||||| | | |||||||||||||||| | | |||||||||||| |||  ||| |||| |||||||| ||||     
T  6953008 aaaactcggtattcgatccaagaatcgactaatccga-gggaccaatcccaccgccaacttgcgggggccctgtttaaagccagagcaagctctgtatgg 6953106  T
Q  223 actt-gcccactgaaattgacatcaaagagaatcaaacctgagac 266  Q
    |||| |||||| ||||||| || || || ||||| ||||||||||    
T  6953107 acttagcccaccgaaattggcaccagagggaatcgaacctgagac 6953151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 322
Target Start/End: Complemental strand, 18532203 - 18532107
Alignment:
Q  227 gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacactcaaa-attccaagccaaccactagcccaaccctaaatggg 322  Q
    |||||| ||||||||||||  || ||||| |||||||||| |   |||| ||| |||| || || |||||||||||||||| ||||||| |||||||    
T  18532203 gcccaccgaaattgacatctgagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatggg 18532107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 313
Target Start/End: Original strand, 33585715 - 33585819
Alignment:
Q  210 aagctctatatgaacttgcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacactc-aaaattccaagccaaccactagcc 308  Q
    |||||||||||| ||||||| || |||||| |||| | ||  |||| ||||||| || |||||||| |||||||| || ||  ||| ||||||||||| |    
T  33585715 aagctctatatggacttgcctaccgaaattaacataagaggaaatcgaacctgaaactttgagaggagcacactctaagatctcaaaccaaccactaggc 33585814  T
Q  309 caacc 313  Q
    |||||    
T  33585815 caacc 33585819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 235 - 286
Target Start/End: Original strand, 1372514 - 1372565
Alignment:
Q  235 aaattgacatcaaagagaatcaaacctgagacattgagaggngcacactcaa 286  Q
    |||||||||||| || ||||| |||||||||| || ||||| ||||||||||    
T  1372514 aaattgacatcagagggaatcgaacctgagaccttaagaggagcacactcaa 1372565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 249 - 284
Target Start/End: Complemental strand, 6530884 - 6530849
Alignment:
Q  249 gagaatcaaacctgagacattgagaggngcacactc 284  Q
    ||||||| ||||||||||||||||||| ||||||||    
T  6530884 gagaatcgaacctgagacattgagaggagcacactc 6530849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 150 - 213
Target Start/End: Original strand, 7557976 - 7558040
Alignment:
Q  150 cgactaattcaatgggaccaatcccaccgt-catttgcgggggcccgttctaagacagaacaagc 213  Q
    |||||||||| | ||||||||||||||||| || ||||||||| |||||  ||| ||||||||||    
T  7557976 cgactaattcgaggggaccaatcccaccgtccacttgcgggggtccgtttaaagccagaacaagc 7558040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 187 - 301
Target Start/End: Complemental strand, 13749192 - 13749077
Alignment:
Q  187 gggggcccgttctaagacagaacaa-gctctatatgaacttgcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacactca 285  Q
    |||| ||||||||||| |||| ||| ||| | |||||||||||||||  |||||| || | |||  |||| ||||||| || |||||||| ||| ||||     
T  13749192 ggggccccgttctaagccagagcaaagctttgtatgaacttgcccaccaaaattggcaccgaaggaaatcgaacctgaaaccttgagaggagcagactcc 13749093  T
Q  286 aaattccaagccaacc 301  Q
    |||| ||||| |||||    
T  13749092 aaatcccaagtcaacc 13749077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 125 - 311
Target Start/End: Complemental strand, 21603431 - 21603241
Alignment:
Q  125 aaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccg-tcatttgcggggg-cccgttctaagacagaacaagctctatatga 222  Q
    |||||||| ||| || | |||| | |||||||| | | ||||||||||||||||  || ||||||||| ||||||  ||| |||| |||||||| ||||     
T  21603431 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatgg 21603332  T
Q  223 actt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacactc-aaaattccaagccaaccactagcccaa 311  Q
     ||| |||||| ||||||| || || || ||||| |||||||||| |   |||| ||| |||| || || |||||||||||||||| ||||    
T  21603331 gcttagcccaccgaaattggcaccatagggaatcgaacctgagacctctggaggagcaaactctaagatcccaagccaaccactaggccaa 21603241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 122 - 177
Target Start/End: Complemental strand, 26261988 - 26261933
Alignment:
Q  122 ttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccacc 177  Q
    ||||||| ||| |||||| |||||| |||||||||||| |  ||||||||||||||    
T  26261988 ttgaaaaatcggtattcgattcaagaaccgactaattcgaatggaccaatcccacc 26261933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 249 - 284
Target Start/End: Original strand, 40136961 - 40136996
Alignment:
Q  249 gagaatcaaacctgagacattgagaggngcacactc 284  Q
    |||||||||||||||||| |||||||| ||||||||    
T  40136961 gagaatcaaacctgagaccttgagaggagcacactc 40136996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 1e-21; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 111 - 322
Target Start/End: Original strand, 32059426 - 32059641
Alignment:
Q  111 tttttcttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccg-tcatttgcggggg-cccgttctaagacagaa 208  Q
    ||||| |||| ||||||||||| ||| || | ||||||||||||||| | | ||||||||||||||||  || ||||||||| ||||||  ||| ||||     
T  32059426 tttttttttttttgaaaactcggtatccgatccaaggaccgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagag 32059525  T
Q  209 caagctctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacact-caaaattccaagccaaccactag 306  Q
    |||||||| |||| |||| |||||| ||||||| || || |  ||||| |||||||||| ||  |||| ||| ||| ||| || ||||||||||||||||    
T  32059526 caagctctgtatggacttagcccaccgaaattggcaccagaaggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactag 32059625  T
Q  307 cccaaccctaaatggg 322  Q
     ||||||| |||||||    
T  32059626 gccaaccccaaatggg 32059641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 111 - 321
Target Start/End: Original strand, 8484647 - 8484861
Alignment:
Q  111 tttttcttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccg-tcatttgcggggg-cccgttctaagacagaa 208  Q
    ||||| |||| ||||||||||| ||| || | |||| | |||||||| | | ||||||||||||||||  || ||||||||| ||||||  ||| ||||     
T  8484647 tttttttttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagag 8484746  T
Q  209 caagctctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacact-caaaattccaagccaaccactag 306  Q
    |||||||| ||||||||| |||||| ||||||| || || || |||||||||||||||| |   |||| ||| ||| ||| || ||||||||||||||||    
T  8484747 caagctctgtatgaacttagcccaccgaaattggcaccagagggaatcaaacctgagacctctggaggagcaaactccaagatcccaagccaaccactag 8484846  T
Q  307 cccaaccctaaatgg 321  Q
     ||||||| ||||||    
T  8484847 gccaaccccaaatgg 8484861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 125 - 226
Target Start/End: Complemental strand, 5049333 - 5049231
Alignment:
Q  125 aaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccgt-catttgcgggggcccgttctaagacagaacaagctctatatgaa 223  Q
    |||||| | |||||| | |||| | |||||||||| ||||||||||||||||||| ||||||||||||||||||  ||| |||| |||||||| ||||||    
T  5049333 aaaacttggtattcgatccaagaatcgactaattcgatgggaccaatcccaccgtccatttgcgggggcccgtttaaagccagagcaagctctgtatgaa 5049234  T
Q  224 ctt 226  Q
    |||    
T  5049233 ctt 5049231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 111 - 322
Target Start/End: Original strand, 31287932 - 31288147
Alignment:
Q  111 tttttcttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccg-tcatttgcggggg-cccgttctaagacagaa 208  Q
    ||||| |||| ||||||||||| ||| |||| |||| |||||||||||| | | ||||||||||||||  || ||||||||| ||||||  ||| || |     
T  31287932 tttttttttttttgaaaactcggtatccggtccaagaaccgactaattcgaggagaccaatcccaccgcccacttgcgggggccccgtttaaagtcaaag 31288031  T
Q  209 caagctctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacact-caaaattccaagccaaccactag 306  Q
    |||||| | |||| ||||  ||||| ||||||| || ||||| ||||| ||| |||||| ||  |||| ||| ||| ||| || ||||||||||||||||    
T  31288032 caagctttgtatggacttaacccaccgaaattggcaccaaagggaatcgaacatgagacctttggaggagcaaactccaagatcccaagccaaccactag 31288131  T
Q  307 cccaaccctaaatggg 322  Q
     ||||||| |||||||    
T  31288132 gccaacccaaaatggg 31288147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 125 - 323
Target Start/End: Original strand, 19145412 - 19145613
Alignment:
Q  125 aaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccg-tcatttgcgggggcccgttctaagacagaac-aagctctatatga 222  Q
    |||||||| ||| || | |||| ||| |||||| | | ||||||||||||||||  || ||||||||| || ||  ||| |||| | ||||||| ||||     
T  19145412 aaaactcggtatccgatccaagaaccaactaatccgaggggaccaatcccaccgcccacttgcgggggaccatttaaagccagagcaaagctctgtatgg 19145511  T
Q  223 acttgcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacact-caaaattccaagccaaccactagcccaaccctaaatgg 321  Q
    |||||||||| ||||||| || || || ||||| |||| ||||| |||||||| ||| ||| ||| || ||||| |||||||||| ||||||| ||||||    
T  19145512 acttgcccaccgaaattggcaccagagggaatcgaaccggagaccttgagaggagcatactccaagatcccaagtcaaccactaggccaaccccaaatgg 19145611  T
Q  322 gc 323  Q
    ||    
T  19145612 gc 19145613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 117 - 322
Target Start/End: Original strand, 27498723 - 27498932
Alignment:
Q  117 ttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccg-tcatttgcggggg-cccgttctaagacagaacaagct 214  Q
    |||| ||||||||||| ||| || | |||| | |||||||| | | ||||||||||||||||  || ||||||||| ||||||  ||| |||| ||||||    
T  27498723 tttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagct 27498822  T
Q  215 ctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacact-caaaattccaagccaaccactagcccaac 312  Q
     | |||| |||| |||||| ||||||| || || || ||||| |||||||||| |  ||||| ||| ||| ||| |||||||||||||||||||  ||||    
T  27498823 atgtatggacttagcccaccgaaattggcaccagagggaatcgaacctgagacctctagaggagcaaactccaagattccaagccaaccactaggtcaac 27498922  T
Q  313 cctaaatggg 322  Q
    || |||||||    
T  27498923 cccaaatggg 27498932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 125 - 321
Target Start/End: Original strand, 930486 - 930685
Alignment:
Q  125 aaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccgt-catttgcgggggcccgttctaagacagaacaagctctatatgaa 223  Q
    |||||||| ||| || | ||||||||||||||| | | |||||||||| ||| || || ||||| ||||  |||||||| | || |||||| | ||||||    
T  930486 aaaactcgatatccgatccaaggaccgactaatccgaggggaccaatcacactgtccacttgcgagggcttgttctaagccggagcaagctatgtatgaa 930585  T
Q  224 cttgcccactgaaattgacatcaa-agagaatcaaacctgagacattgagaggngcacactc-aaaattccaagccaaccactagcccaaccctaaatgg 321  Q
     ||| |||| ||||||| || |||  | ||||| |||||||||| |||||||| ||| |||| |||||  ||||||||||||| | ||||||| ||||||    
T  930586 tttgtccaccgaaattggcaccaagtgggaatcgaacctgagactttgagaggagcaaactctaaaatctcaagccaaccactgggccaaccccaaatgg 930685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 122 - 266
Target Start/End: Complemental strand, 38684407 - 38684261
Alignment:
Q  122 ttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccg-tcatttgcgggggcccgttctaagacagaacaagctctatat 220  Q
    ||||||| ||| ||| || | |||| | |||||||| | | |||||||||||||||| ||| |||||||||||||||  ||| |||| |||||||| |||    
T  38684407 ttgaaaaatcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgctcacttgcgggggcccgtttaaagccagagcaagctctgtat 38684308  T
Q  221 gaactt-gcccactgaaattgacatcaaagagaatcaaacctgagac 266  Q
    | |||| |||||| ||||||| || || || ||||| ||||||||||    
T  38684307 ggacttagcccaccgaaattggcaccagagggaatcgaacctgagac 38684261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 111 - 321
Target Start/End: Complemental strand, 4603988 - 4603774
Alignment:
Q  111 tttttcttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccgt-catttgc-gggggcccgttctaagacagaa 208  Q
    ||||| |||| ||||||||||| ||| || | ||||||||||||||| | | ||||||||||||||||| || |||| |||| ||||||  ||| ||||     
T  4603988 tttttttttttttgaaaactcggtatccgatccaaggaccgactaatccgaggggaccaatcccaccgtccacttgcaggggccccgtttaaagccagag 4603889  T
Q  209 caagctctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacact-caaaattccaagccaaccactag 306  Q
    | |||||| |||| |||| |||||  ||||||| || || |  ||||| ||| |||||  ||  |||| ||| ||| ||| || ||||||||||||||||    
T  4603888 cgagctctgtatggacttagcccatcgaaattggcaccagaaggaatcgaacttgagatctttggaggagcaaactccaagatcccaagccaaccactag 4603789  T
Q  307 cccaaccctaaatgg 321  Q
     ||||||| ||||||    
T  4603788 gccaaccccaaatgg 4603774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 150 - 322
Target Start/End: Original strand, 11464933 - 11465108
Alignment:
Q  150 cgactaattcaatgggaccaatcccacc-gtcatttgcgggggcccgttctaagacagaacaagctctatatgaactt-gcccactgaaattgacatcaa 247  Q
    |||||||||| | |||||||||||||||   || |||||||| ||||||  ||| ||||  ||||||| ||||||||| ||||||  |||||| || ||     
T  11464933 cgactaattcgaggggaccaatcccaccacccacttgcggggccccgtttaaagccagagtaagctctgtatgaacttagcccaccaaaattggcaccag 11465032  T
Q  248 agagaatcaaacctgagacattgagaggngcacact-caaaattccaagccaaccactagcccaaccctaaatggg 322  Q
    ||  |||| |||||||||||||  |||| ||| ||| ||| ||| |||||||| |||||| ||||||| |||||||    
T  11465033 aggaaatcgaacctgagacatttggaggagcaaactccaagatttcaagccaatcactaggccaacccgaaatggg 11465108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 111 - 266
Target Start/End: Complemental strand, 18207418 - 18207260
Alignment:
Q  111 tttttcttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccg-tcatttgcgggggcc-cgttctaagacagaa 208  Q
    ||||| |||| ||||||||||| ||| || | |||| | |||||||| | | ||||||||||||||||  || ||||||||||| ||||  ||| |||||    
T  18207418 tttttttttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggcctcgtttaaagccagaa 18207319  T
Q  209 caagctctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagac 266  Q
    |||||||| |||| |||| |||||| ||||||| || |  || ||||| ||||||||||    
T  18207318 caagctctgtatggacttagcccaccgaaattggcaccggagggaatcgaacctgagac 18207260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 111 - 240
Target Start/End: Original strand, 19456197 - 19456328
Alignment:
Q  111 tttttcttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccg-tcatttgcgggggcccgttctaagacagaac 209  Q
    ||||| |||| ||||||||||| ||| || | |||| | |||||||| | | ||||||||||||||||  || |||||||| ||||||  ||| |||| |    
T  19456197 tttttttttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggccccgtttaaagccagagc 19456296  T
Q  210 aagctctatatgaactt-gcccactgaaattg 240  Q
    ||||||| |||| |||| |||||| |||||||    
T  19456297 aagctctgtatggacttagcccaccgaaattg 19456328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 117 - 322
Target Start/End: Original strand, 15641098 - 15641306
Alignment:
Q  117 ttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccgtc-atttgcgggggccc-gttctaagacagaacaagct 214  Q
    |||| ||||||||||| ||| || | |||| | |||||||| | | |||||||||||||||| | | |||||||||||| |||  ||| |||| ||||||    
T  15641098 tttttttgaaaactcggtatccgat-caagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagct 15641196  T
Q  215 ctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacactcaaa-attccaagccaaccactagcccaac 312  Q
    || |||| |||| |||||| ||||||| |  || || ||||| |||||||||| |   |||| ||| |||| || || |||||||||||||||| | |||    
T  15641197 ctgtatggacttagcccaccgaaattggctccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggctaac 15641296  T
Q  313 cctaaatggg 322  Q
    || |||||||    
T  15641297 cccaaatggg 15641306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 322
Target Start/End: Complemental strand, 34310339 - 34310138
Alignment:
Q  125 aaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccgt-catttgcggggg-cccgttctaagacagaacaagctctatatga 222  Q
    |||||||| ||| || | |||| | ||| |||||| | ||||||||||||||||| || ||  ||||| ||||||  ||| |||| |||||||| ||||     
T  34310339 aaaactcggtatccgatccaagaatcgattaattcgaggggaccaatcccaccgtccacttatgggggtcccgtttaaagccagagcaagctctgtatgg 34310240  T
Q  223 actt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacact-caaaattccaagccaaccactagcccaaccctaaatg 320  Q
    |||| ||||||  |||||| || || || ||||| |||||||||| |   |||| ||| ||| ||| |||||||||| |||||||| ||||||| |||||    
T  34310239 acttagcccaccaaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagattccaagccgaccactaggccaaccccaaatg 34310140  T
Q  321 gg 322  Q
    ||    
T  34310139 gg 34310138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 26009250 - 26009315
Alignment:
Q  111 tttttcttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccac 176  Q
    ||||| |||| ||||||||||| |||||| |||||| |||||||||| | | ||||| ||||||||    
T  26009250 tttttttttttttgaaaactcgatattcgattcaagaaccgactaatccgaggggactaatcccac 26009315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 122 - 243
Target Start/End: Original strand, 7085623 - 7085747
Alignment:
Q  122 ttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccg-tcatttgcgggg-gcccgttctaagacagaacaagctctata 219  Q
    ||||||||||| ||| || |||||| | |||||||| | | ||||||||||||||||  || ||||||||  ||||||  ||| |||| |||||||| ||    
T  7085623 ttgaaaactcggtatccgattcaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggaccccgtttaaagtcagagcaagctctgta 7085722  T
Q  220 tgaactt-gcccactgaaattgaca 243  Q
    || |||| |||||| ||||||||||    
T  7085723 tggacttagcccaccgaaattgaca 7085747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 10813851 - 10813903
Alignment:
Q  125 aaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccacc 177  Q
    |||||||| ||||||||||||| || ||||||| ||| ||||| |||||||||    
T  10813851 aaaactcggtattcggttcaagaactgactaatccaaggggacaaatcccacc 10813903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 322
Target Start/End: Original strand, 11926501 - 11926703
Alignment:
Q  125 aaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccgtc-atttgcggggg--cccgttctaagacagaacaagctctatatg 221  Q
    |||||||| ||| || | |||| | |||||||| | | |||||||||||||||  | | |||||||||  ||||||  ||| |||| |||||||| ||||    
T  11926501 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccacccacttgcggggggccccgtttaaagccagagcaagctctgtatg 11926600  T
Q  222 aactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacactcaaa-attccaagccaaccactagcccaaccctaaat 319  Q
     |||| |||||| ||||||| || || || ||||| |||||||||| |   |||| ||| |||| || || |||| ||||||||||| ||||||| ||||    
T  11926601 gacttagcccaccgaaattggcaccagagggaatctaacctgagacctctggaggagcaaactccaagatcccaaaccaaccactaggccaaccccaaat 11926700  T
Q  320 ggg 322  Q
    |||    
T  11926701 ggg 11926703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 320
Target Start/End: Original strand, 15971181 - 15971321
Alignment:
Q  183 ttgcggggg-cccgttctaagacagaacaagctctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcac 280  Q
    ||||||||| ||||||  ||| |||| |||||| | |||| |||| |||||| ||||||||||||| ||  |||| |||||||||| |   |||| |||     
T  15971181 ttgcgggggtcccgtttaaagtcagagcaagctatgtatggacttagcccaccgaaattgacatcagaggaaatcgaacctgagacctctggaggagcaa 15971280  T
Q  281 actcaaa-attccaagccaaccactagcccaaccctaaatg 320  Q
    |||| || || |||||||||||||||  |||||||||||||    
T  15971281 actccaagatcccaagccaaccactaagccaaccctaaatg 15971321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 252 - 322
Target Start/End: Original strand, 12317280 - 12317351
Alignment:
Q  252 aatcaaacctgagacattgagaggngcacactcaaa-attccaagccaaccactagcccaaccctaaatggg 322  Q
    ||||||||| ||||| |  ||||| ||| |||| || ||||||||||||||||||| ||||||| |||||||    
T  12317280 aatcaaacccgagacctcaagaggagcaaactccaagattccaagccaaccactaggccaaccccaaatggg 12317351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 122 - 266
Target Start/End: Complemental strand, 30486028 - 30485881
Alignment:
Q  122 ttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccg-tcatttgcgggggc-ccgttctaagacagaacaagctctata 219  Q
    ||||||||||| ||| || | |||| |  ||||||| | | ||||||||||||||||  || ||||||||||  ||||  ||| |||| |||||||| ||    
T  30486028 ttgaaaactcggtatccgatccaagaattgactaatccgaggggaccaatcccaccgcccacttgcgggggcatcgtttaaagccagagcaagctctgta 30485929  T
Q  220 tgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagac 266  Q
    || |||| |||||| |||||||||| || || ||||| ||||||||||    
T  30485928 tggacttagcccaccgaaattgacaccagagtgaatcgaacctgagac 30485881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 117 - 322
Target Start/End: Original strand, 5074 - 5283
Alignment:
Q  117 ttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccgtc-atttgcgggggccc-gttctaagacagaacaagct 214  Q
    |||| ||||||||||| ||| || | |||| | |||||||| | | |||||||||||||||| | |||||||||||||| |||  ||| |||| ||||||    
T  5074 tttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccatttgcgggggccccgtttaaagccagagcaagct 5173  T
Q  215 ctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacactcaaa-attccaagccaaccactagcccaac 312  Q
    || |||| |||| |||||| ||||||| || || || ||||| |||||||||| ||  |||| ||| |||| || || |||||||||||||||| |||||    
T  5174 ctgtatggacttagcccaccgaaattggcaccagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaac 5273  T
Q  313 cctaaatggg 322  Q
    || |||||||    
T  5274 cccaaatggg 5283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 1e-20; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 117 - 322
Target Start/End: Original strand, 15360090 - 15360299
Alignment:
Q  117 ttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccgtc-atttgcgggggccc-gttctaagacagaacaagct 214  Q
    |||| ||||||||||| ||| || | |||| | |||||||| | | |||||||||||||||| | |||||||||||||| |||  ||| |||| ||||||    
T  15360090 tttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccatttgcgggggccccgtttaaagccagagcaagct 15360189  T
Q  215 ctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacactcaaa-attccaagccaaccactagcccaac 312  Q
    || |||| |||| |||||| ||||||| || || || ||||| |||||||||| ||  |||| ||| |||| || || |||||||||||||||| |||||    
T  15360190 ctgtatggacttagcccaccgaaattggcaccagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaac 15360289  T
Q  313 cctaaatggg 322  Q
    || |||||||    
T  15360290 cccaaatggg 15360299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 112 - 322
Target Start/End: Original strand, 3222623 - 3222835
Alignment:
Q  112 ttttcttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccg-tcatttgcgggggcccgttctaagacagaaca 210  Q
    |||| |||| ||||||||||| ||| || | |||| | |||||||| | | ||||||||||||||||  || |||||||| ||||||  |||||||| ||    
T  3222623 ttttttttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggccccgtttaaagacagagca 3222722  T
Q  211 agctctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacact-caaaattccaagccaaccactagcc 308  Q
    |||||| |||| |||| |||||| ||||||| || || || ||||| ||||||||||  |  |||| ||| ||| ||| || |||||||||||||||| |    
T  3222723 agctctgtatggacttagcccaccgaaattggcaccagagggaatcgaacctgagac-ctctgaggagcaaactgcaagatcccaagccaaccactaggc 3222821  T
Q  309 caaccctaaatggg 322  Q
    |||||| |||||||    
T  3222822 caaccccaaatggg 3222835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 125 - 314
Target Start/End: Complemental strand, 11449068 - 11448875
Alignment:
Q  125 aaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccg-tcatttgcggggg-cccgttctaagacagaacaagctctatatga 222  Q
    |||||||| ||| || |||||| | |||||||| | | ||||||||||||||||  || ||||||||| ||||||  ||| |||| |||||||| ||||     
T  11449068 aaaactcgatatccgattcaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatgg 11448969  T
Q  223 actt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacact-caaaattccaagccaaccactagcccaaccc 314  Q
    |||| |||||| ||||||| || || |||||||| |||||||||| |   |||| ||| ||| ||| || |||||||||||||||| |||||||    
T  11448968 acttagcccaccgaaattggcaccagagagaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccc 11448875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 117 - 266
Target Start/End: Complemental strand, 1345140 - 1344988
Alignment:
Q  117 ttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccgt-catttgc-gggggcccgttctaagacagaacaagct 214  Q
    |||| ||||||||||| ||| || | |||| | |||||||| ||| ||||||||||||||||| || |||| |||||||||||  ||| |||| ||||||    
T  1345140 tttttttgaaaactcggtatccgatccaagaatcgactaatccaaggggaccaatcccaccgtccacttgcggggggcccgtttaaagccagagcaagct 1345041  T
Q  215 ctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagac 266  Q
     | |||| |||| |||||||||||||| || || || ||||| ||||||||||    
T  1345040 ttgtatggacttagcccactgaaattggcaccagagggaatcgaacctgagac 1344988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 111 - 322
Target Start/End: Complemental strand, 34147557 - 34147342
Alignment:
Q  111 tttttcttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccg-tcatttgc-gggggcccgttctaagacagaa 208  Q
    ||||| |||| ||||||||||| ||| || | |||| | |||||||| | | ||||||||||||||||  || |||| |||||||||||  ||| ||||     
T  34147557 tttttttttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggggcccgtttaaagccagag 34147458  T
Q  209 caagctctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacact-caaaattccaagccaaccactag 306  Q
    |||||||| |||| |||| |||||| ||||||| || || || ||||| |||||||||| |   || | ||| ||| ||| || ||||||||||||||||    
T  34147457 caagctctgtatggacttagcccaccgaaattggcaccagagggaatcgaacctgagacttctggaagagcaaactccaagatcccaagccaaccactag 34147358  T
Q  307 cccaaccctaaatggg 322  Q
     ||||||| |||||||    
T  34147357 gccaaccccaaatggg 34147342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 111 - 322
Target Start/End: Complemental strand, 34160173 - 34159958
Alignment:
Q  111 tttttcttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccg-tcatttgc-gggggcccgttctaagacagaa 208  Q
    ||||| |||| ||||||||||| ||| || | |||| | |||||||| | | ||||||||||||||||  || |||| |||||||||||  ||| ||||     
T  34160173 tttttttttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggggcccgtttaaagccagag 34160074  T
Q  209 caagctctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacact-caaaattccaagccaaccactag 306  Q
    |||||||| |||| |||| |||||| ||||||| || || || ||||| |||||||||| |   || | ||| ||| ||| || ||||||||||||||||    
T  34160073 caagctctgtatggacttagcccaccgaaattggcaccagagggaatcgaacctgagacttctggaagagcaaactccaagatcccaagccaaccactag 34159974  T
Q  307 cccaaccctaaatggg 322  Q
     ||||||| |||||||    
T  34159973 gccaaccccaaatggg 34159958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 117 - 284
Target Start/End: Original strand, 17149448 - 17149618
Alignment:
Q  117 ttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccg-tcatttgcggggg-cccgttctaagacagaacaa-gc 213  Q
    |||| |||| |||||| |||  | ||||||||||||||||||| | |||||||||||||||| ||| ||||||||| ||| ||  ||| || | ||| ||    
T  17149448 tttttttgacaactcggtatctgattcaaggaccgactaattcgaggggaccaatcccaccgttcacttgcgggggccccatttaaagccaaagcaaggc 17149547  T
Q  214 tctatatgaacttgcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacactc 284  Q
    ||| |||| ||||||| || ||||||  || || || ||||| |||||||||| |||||||| ||||||||    
T  17149548 tctgtatggacttgccaaccgaaattagcaccagagggaatcgaacctgagaccttgagaggagcacactc 17149618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 111 - 268
Target Start/End: Original strand, 17081040 - 17081200
Alignment:
Q  111 tttttcttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccg-tcatttgcggggg-cccgttctaagacagaa 208  Q
    ||||| |||| ||||||||||| |||||| | |||| | | ||| |||| | ||||||||||||||||  || ||||||||| ||| ||  ||| ||||     
T  17081040 tttttttttttttgaaaactcggtattcgatccaagaaacaacttattcgaggggaccaatcccaccgcccacttgcgggggccccatttaaagtcagag 17081139  T
Q  209 caagctctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacat 268  Q
    |||||||| |||| |||| |||||| |||||||||| || || ||||||||| ||||||||    
T  17081140 caagctctgtatggacttagcccaccgaaattgacaccagagggaatcaaacttgagacat 17081200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 111 - 322
Target Start/End: Original strand, 21982307 - 21982521
Alignment:
Q  111 tttttcttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccg-tcatttgcggggg-cccgttctaagacagaa 208  Q
    ||||| |||| ||||||||||| ||| || | |||| | |||||||| | | ||||||||||||||||  || ||||||||| ||||||  ||| ||||     
T  21982307 tttttttttttttgaaaactcggtatccgatccaagaatcgactaatccga-gggaccaatcccaccgcccacttgcgggggccccgtttaaagccagag 21982405  T
Q  209 caagctctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacac-tcaaaattccaagccaaccactag 306  Q
    |||||||| |||| |||| |||||||||||||| || ||  | ||||| ||||| |||| |   |||| ||| || |||| || ||||||||||||||||    
T  21982406 caagctctgtatggacttagcccactgaaattggcaccatcgggaatcgaacctcagacctctggaggagcaaacttcaagatcccaagccaaccactag 21982505  T
Q  307 cccaaccctaaatggg 322  Q
     ||||||| |||||||    
T  21982506 gccaaccccaaatggg 21982521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 204 - 322
Target Start/End: Complemental strand, 12591753 - 12591633
Alignment:
Q  204 cagaacaagctctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacactcaaa-attccaagccaacc 301  Q
    |||| |||||||| |||| |||| |||||||||||||| ||  | || ||||| |||||||||| ||  |||| ||| |||| || || |||||||||||    
T  12591753 cagagcaagctctgtatggacttagcccactgaaattggcacgagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaacc 12591654  T
Q  302 actagcccaaccctaaatggg 322  Q
    ||||| ||||||| |||||||    
T  12591653 actaggccaaccccaaatggg 12591633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 212 - 322
Target Start/End: Complemental strand, 9208359 - 9208248
Alignment:
Q  212 gctctatatgaacttgcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacactcaaa-attccaagccaaccactagccca 310  Q
    ||||| |||| |||||||||| ||||||| || ||  | ||||| |||||||||| |||||||| ||| |||| || || |||| |||||||||||  ||    
T  9208359 gctctgtatggacttgcccaccgaaattggcaccagggggaatcgaacctgagaccttgagaggagcaaactccaagatcccaatccaaccactagaaca 9208260  T
Q  311 accctaaatggg 322  Q
    |||| |||||||    
T  9208259 accccaaatggg 9208248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 117 - 226
Target Start/End: Original strand, 21148503 - 21148613
Alignment:
Q  117 ttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccg-tcatttgcgggggcccgttctaagacagaacaagctc 215  Q
    |||| ||||||||||| ||| || |||||| | |||||||| | | ||||||||||||||||  || |||||||| ||||||  ||| |||| |||||||    
T  21148503 tttttttgaaaactcggtatccgattcaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggccccgtttaaagtcagagcaagctc 21148602  T
Q  216 tatatgaactt 226  Q
    | |||| ||||    
T  21148603 tgtatggactt 21148613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 218 - 322
Target Start/End: Complemental strand, 33499576 - 33499470
Alignment:
Q  218 tatgaacttgcccactgaaattgacatcaaagagaatca-aacctgagacattgagaggngcacactcaaa-attccaagccaaccactagcccaaccct 315  Q
    |||| ||| |||||| |||||||||| || || |||||  |||||||||| |||||||| ||| |||| || || ||||||||||||| || |||||||     
T  33499576 tatggactagcccaccgaaattgacaccagagggaatctgaacctgagaccttgagaggagcaaactccaagatcccaagccaaccaccaggccaacccc 33499477  T
Q  316 aaatggg 322  Q
    |||||||    
T  33499476 aaatggg 33499470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 126 - 322
Target Start/End: Complemental strand, 9239171 - 9238971
Alignment:
Q  126 aaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccgtc-atttgcgggggcccgttctaa-gacagaacaagctctatatgaa 223  Q
    ||||||| ||| || | |||| | |||||||| | | |||||||||||||||| | | ||||||||||||  | ||| | || | ||||||||||||| |    
T  9239171 aaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccatttaaagccaaagcaagctctatatgga 9239072  T
Q  224 cttg-cccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacactcaaa-attccaagccaaccactagcccaaccctaaatgg 321  Q
    |||  ||||| ||||||| || || || ||||| |||||||||| |   |||| ||| |||| || || |||||||||||||||| ||||||| ||||||    
T  9239071 cttaacccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 9238972  T
Q  322 g 322  Q
    |    
T  9238971 g 9238971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 322
Target Start/End: Complemental strand, 28672239 - 28672063
Alignment:
Q  150 cgactaattcaatgggaccaatcccaccg-tcatttgcg-ggggcccgttctaagacagaacaagctctatatgaactt-gcccactgaaattgacatca 246  Q
    |||||||| | | ||||||||||||||||  || ||||| ||||||||||  ||| || |||||||||| |||| |||| ||||||  ||||||||| ||    
T  28672239 cgactaatccgaggggaccaatcccaccgcccacttgcgaggggcccgtttaaagccaaaacaagctctgtatggacttagcccaccaaaattgacacca 28672140  T
Q  247 aagagaatcaaacctgagacattgagaggngcacact-caaaattccaagccaaccactagcccaaccctaaatggg 322  Q
     || ||||| ||||| |||| |  ||||| ||| ||| ||| ||  |||| |||||||||| ||||||| |||||||    
T  28672139 gagggaatcgaacctaagacctctagaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatggg 28672063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 322
Target Start/End: Original strand, 30345216 - 30345288
Alignment:
Q  251 gaatcaaacctgagacattgagaggngcacactcaaaattcc-aagccaaccactagcccaaccctaaatggg 322  Q
    ||||||||||||| || || |||||  ||||||||||| ||| |||||||||| ||| |||||| ||||||||    
T  30345216 gaatcaaacctgataccttaagaggatcacactcaaaaatcctaagccaaccattaggccaaccttaaatggg 30345288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 321
Target Start/End: Complemental strand, 9844137 - 9843935
Alignment:
Q  123 tgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccgtc-atttgcgggggccc-gttctaagacagaacaagctctatat 220  Q
    |||||||||| ||| || | |||| | |||||||| | | |||||||||| ||||| | | ||| |||||||| |||  ||| ||||||||||||| |||    
T  9844137 tgaaaactcgatatccgatccaagaatcgactaatccgaagggaccaatctcaccgcccacttgagggggccccgtttaaagccagaacaagctctgtat 9844038  T
Q  221 gaacttg-cccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacactcaaa-attccaagccaaccactagcccaaccctaaa 318  Q
    | ||||  |||||  ||||||||| || ||  | || |||||||||| |  ||||| ||| |||| || || |||||||||||||||| ||||||| |||    
T  9844037 ggacttaacccaccaaaattgacaccagaggaagtcgaacctgagacctctagaggagcaaactccaagatcccaagccaaccactagaccaaccccaaa 9843938  T
Q  319 tgg 321  Q
    |||    
T  9843937 tgg 9843935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 125 - 322
Target Start/End: Original strand, 97366 - 97567
Alignment:
Q  125 aaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccgtc-atttgcggggg-cccgttctaagacagaacaagctctatatga 222  Q
    |||||||| ||| |||| |||  |||||||||| | |  ||||||||||||||| | | ||||||||| ||||||  ||| |||| |||||||| ||||     
T  97366 aaaactcggtatccggtccaaaaaccgactaatacgagaggaccaatcccaccgcccacttgcgggggtcccgtttaaagtcagagcaagctctgtatgg 97465  T
Q  223 actt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacact-caaaattccaagccaaccactagcccaaccctaaatg 320  Q
    |||| |||||| ||||||| || || || ||||| |||||||||| ||  |||| ||| ||| ||| || |||||||||||||||| ||||||| |||||    
T  97466 acttagcccaccgaaattggcaccagagggaatcgaacctgagacctttggaggagcaaactacaagatcccaagccaaccactaggccaaccccaaatg 97565  T
Q  321 gg 322  Q
    ||    
T  97566 gg 97567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 125 - 311
Target Start/End: Original strand, 29143 - 29332
Alignment:
Q  125 aaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccgtc-atttgcgggggcccgttctaagacagaacaa-gctctatatga 222  Q
    |||||||| ||| || | ||||||| |||||||   | |||||||||||||| ||| ||||||||||| || || |||| |||| ||| ||||| ||||     
T  29143 aaaactcggtatccgatccaaggactgactaatctgaggggaccaatcccactgtccatttgcgggggtccattttaagccagagcaaagctctgtatgg 29242  T
Q  223 acttgcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacact-caaaattccaagccaaccactagcccaa 311  Q
    |||| || || |||| || |||||  | ||||| ||||| |||| ||||||||  |||||| ||| ||||||||||||||||||| ||||    
T  29243 acttaccgaccgaaaatggcatcagcgggaatcgaacctaagaccttgagaggaacacacttcaagattccaagccaaccactaggccaa 29332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 112 - 320
Target Start/End: Original strand, 9287 - 9498
Alignment:
Q  112 ttttcttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccgt-catttgcggggg-cccgttctaagacagaac 209  Q
    |||| |||| ||||||||||| ||| || | |||| | |||||||||| | ||||||||||||||||| || ||||||||| ||| ||  ||| |||| |    
T  9287 ttttttttttttgaaaactcggtatccgat-caagaatcgactaattcgaggggaccaatcccaccgtccacttgcgggggccccatttaaagccagagc 9385  T
Q  210 aagctctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacact-caaaattccaagccaaccactagc 307  Q
    ||||||| |||| |||| |||||| ||||||| |  || || ||||| |||||||||| |   |||| ||| ||| ||| || ||||||||||||||||     
T  9386 aagctctgtatggacttagcccaccgaaattggctccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactagg 9485  T
Q  308 ccaaccctaaatg 320  Q
    ||||||| |||||    
T  9486 ccaaccccaaatg 9498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 111 - 320
Target Start/End: Original strand, 11987 - 12199
Alignment:
Q  111 tttttcttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccgt-catttgcgggggcccgttctaagacagaac 209  Q
    ||||| |||| ||||||||||| ||| | | ||||| |  ||||||||| | ||||||||||||||||| || ||| |||| ||| ||  ||| |||| |    
T  11987 tttttttttttttgaaaactcggtatcccgatcaagaattgactaattcgaggggaccaatcccaccgtccacttgtggggccccatttaaagccagagc 12086  T
Q  210 aagctctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacact-caaaattccaagccaaccactagc 307  Q
    ||||||| |||| |||| |||||| ||||||| |  || ||  |||| |||||||||| |   |||| ||| ||| ||| || ||||||||||||||||     
T  12087 aagctctgtatggacttagcccaccgaaattggctccagaggaaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactagg 12186  T
Q  308 ccaaccctaaatg 320  Q
    ||||||| |||||    
T  12187 ccaaccccaaatg 12199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 150 - 320
Target Start/End: Original strand, 1081 - 1255
Alignment:
Q  150 cgactaattcaatgggaccaatcccaccgt-catttgcggggg-cccgttctaagacagaacaagctctatatgaactt-gcccactgaaattgacatca 246  Q
    |||||||||| | ||||||||||||||||| || ||||||||| ||| ||  ||| |||| |||||||| |||| |||| |||||| ||||||| |  ||    
T  1081 cgactaattcgaggggaccaatcccaccgtccacttgcgggggccccatttaaagccagagcaagctctgtatggacttagcccaccgaaattggctcca 1180  T
Q  247 aagagaatcaaacctgagacattgagaggngcacact-caaaattccaagccaaccactagcccaaccctaaatg 320  Q
     || ||||| |||||||||| |   |||| ||| ||| ||| || |||||||||||||||| ||||||| |||||    
T  1181 gagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 1255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 111 - 322
Target Start/End: Complemental strand, 40535 - 40321
Alignment:
Q  111 tttttcttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccg-tcatttgcggggg-cccgttctaagacagaa 208  Q
    ||||| |||| ||||||||||| ||| || | |||| | |||||||| | | ||||||||||||||||  || ||||||||| ||||||  ||| ||||     
T  40535 tttttttttttttgaaaactcggtatccgatccaagaatcgactaatccga-gggaccaatcccaccgcccacttgcgggggccccgtttaaagccagag 40437  T
Q  209 caagctctatatgaactt-gcccactgaaattgacatcaaagagaatcaaacctgagacat-tgagaggngcacact-caaaattccaagccaaccacta 305  Q
    |||||||| |||| |||| |||||| ||||||| || || || ||||| |||||||||| | ||| ||| ||| ||| ||| || | |||||||||||||    
T  40436 caagctctgtatggacttagcccaccgaaattggcaccagagggaatcgaacctgagacctctga-aggagcaaactccaagatcctaagccaaccacta 40338  T
Q  306 gcccaaccctaaatggg 322  Q
    | ||||||| |||||||    
T  40337 ggccaaccccaaatggg 40321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 227 - 322
Target Start/End: Complemental strand, 27868 - 27772
Alignment:
Q  227 gcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacactc-aaaattccaagccaaccactagcccaaccctaaatggg 322  Q
    ||||||| |||||| || || || ||||| |||| ||||| |||||||| ||| |||| ||||| |||| ||||||||||| ||||||| |||||||    
T  27868 gcccactcaaattggcaccacagggaatcgaacccgagaccttgagaggagcaaactccaaaatcccaaaccaaccactagaccaaccccaaatggg 27772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 322
Target Start/End: Original strand, 8508 - 8608
Alignment:
Q  223 acttgcccactgaaattgacatcaaagagaatcaaacctgagacattgagaggngcacactcaaa-attccaagccaaccactagcccaaccctaaatgg 321  Q
    |||||||||| ||||||| || || ||| |||| |||||||||| |   |||| ||| |||| || || |||||||||||||||| ||||||| ||||||    
T  8508 acttgcccaccgaaattggcaccagagataatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 8607  T
Q  322 g 322  Q
    |    
T  8608 g 8608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 194
Target Start/End: Complemental strand, 66965 - 66881
Alignment:
Q  111 tttttcttttgttgaaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccg-tcatttgcgggggccc 194  Q
    ||||| |||| || |||||||| ||| || | ||||||||||||||| | | ||||||||||||||||  || ||||||||||||    
T  66965 ttttttttttttttaaaactcggtatccgatccaaggaccgactaatccgaggggaccaatcccaccgcccacttgcgggggccc 66881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1175 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold1175
Description:

Target: scaffold1175; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 125 - 226
Target Start/End: Original strand, 2426 - 2529
Alignment:
Q  125 aaaactcgntattcggttcaaggaccgactaattcaatgggaccaatcccaccg-tcatttgcggggg-cccgttctaagacagaacaagctctatatga 222  Q
    |||||||| ||| || ||||||||| ||||||| | | ||||||||||||||||  || ||||||||| ||||||  ||| |||| |||||||| ||||     
T  2426 aaaactcggtatccgattcaaggacggactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatgg 2525  T
Q  223 actt 226  Q
    ||||    
T  2526 actt 2529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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