View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0300_low_17 (Length: 249)

Name: NF0300_low_17
Description: NF0300
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0300_low_17
NF0300_low_17
[»] chr3 (52 HSPs)
chr3 (1-239)||(16743998-16744236)
chr3 (1-196)||(14842487-14842682)
chr3 (3-196)||(13839038-13839232)
chr3 (3-196)||(12030073-12030266)
chr3 (9-196)||(2049960-2050147)
chr3 (60-239)||(19231982-19232164)
chr3 (1-122)||(2449238-2449359)
chr3 (1-122)||(17912483-17912603)
chr3 (3-132)||(51158008-51158137)
chr3 (76-196)||(19260749-19260869)
chr3 (3-159)||(15858986-15859143)
chr3 (1-122)||(13975722-13975842)
chr3 (1-122)||(45860948-45861068)
chr3 (3-115)||(15936634-15936746)
chr3 (9-122)||(13954890-13955002)
chr3 (161-239)||(15857120-15857198)
chr3 (164-239)||(3992873-3992948)
chr3 (164-239)||(55513193-55513268)
chr3 (3-115)||(15938476-15938588)
chr3 (164-239)||(2844514-2844589)
chr3 (164-239)||(54037981-54038056)
chr3 (164-239)||(17955837-17955916)
chr3 (3-197)||(15614978-15615170)
chr3 (164-239)||(7854305-7854380)
chr3 (10-88)||(16821291-16821369)
chr3 (1-110)||(55316362-55316471)
chr3 (164-225)||(45581954-45582016)
chr3 (1-110)||(41270218-41270327)
chr3 (52-106)||(14080701-14080756)
chr3 (43-196)||(54651642-54651796)
chr3 (29-115)||(11986173-11986259)
chr3 (180-237)||(17205019-17205076)
chr3 (164-237)||(38810868-38810941)
chr3 (164-196)||(2449152-2449184)
chr3 (164-196)||(16261777-16261809)
chr3 (164-196)||(16933869-16933901)
chr3 (164-196)||(17912398-17912430)
chr3 (164-196)||(23492696-23492728)
chr3 (164-196)||(38168237-38168269)
chr3 (164-196)||(53771365-53771397)
chr3 (182-237)||(12031849-12031904)
chr3 (164-237)||(13301323-13301396)
chr3 (164-237)||(13311979-13312052)
chr3 (180-237)||(17191879-17191936)
chr3 (164-196)||(11986080-11986112)
chr3 (164-196)||(13954804-13954836)
chr3 (164-196)||(14285289-14285321)
chr3 (164-196)||(19947026-19947058)
chr3 (164-196)||(30153265-30153297)
chr3 (164-196)||(33342204-33342236)
chr3 (164-196)||(45861122-45861154)
chr3 (164-196)||(51961031-51961063)
[»] chr1 (23 HSPs)
chr1 (3-239)||(41394366-41394602)
chr1 (1-196)||(20913172-20913367)
chr1 (1-196)||(20931487-20931682)
chr1 (29-196)||(37844374-37844543)
chr1 (29-196)||(20445849-20446019)
chr1 (3-196)||(20893551-20893745)
chr1 (29-196)||(20531614-20531783)
chr1 (1-122)||(51452634-51452755)
chr1 (164-239)||(21860334-21860409)
chr1 (164-238)||(44034829-44034903)
chr1 (3-197)||(45051567-45051759)
chr1 (3-110)||(2116399-2116506)
chr1 (1-195)||(22227951-22228146)
chr1 (1-195)||(22232648-22232843)
chr1 (164-239)||(41218728-41218803)
chr1 (1-110)||(5072388-5072497)
chr1 (1-110)||(18601118-18601227)
chr1 (130-237)||(27675086-27675191)
chr1 (164-195)||(15861327-15861358)
chr1 (180-237)||(13376711-13376768)
chr1 (180-237)||(20177513-20177570)
chr1 (65-106)||(22143361-22143402)
chr1 (164-196)||(51452809-51452841)
[»] chr2 (33 HSPs)
chr2 (9-239)||(20627195-20627426)
chr2 (3-196)||(462882-463075)
chr2 (3-239)||(19794586-19794823)
chr2 (20-239)||(43642838-43643059)
chr2 (3-196)||(36982364-36982560)
chr2 (3-196)||(8891386-8891581)
chr2 (1-122)||(19689401-19689522)
chr2 (1-122)||(23820213-23820334)
chr2 (1-122)||(14906440-14906561)
chr2 (1-122)||(20015153-20015274)
chr2 (10-196)||(24341309-24341501)
chr2 (1-122)||(17396653-17396773)
chr2 (10-122)||(25265390-25265502)
chr2 (100-196)||(22863169-22863267)
chr2 (164-239)||(22275045-22275120)
chr2 (164-239)||(22284278-22284353)
chr2 (165-239)||(15633538-15633612)
chr2 (1-72)||(7507894-7507965)
chr2 (1-110)||(19886661-19886770)
chr2 (164-197)||(19689314-19689347)
chr2 (180-237)||(43646232-43646289)
chr2 (164-196)||(9652796-9652828)
chr2 (164-196)||(14906354-14906386)
chr2 (164-196)||(23820388-23820420)
chr2 (164-195)||(25213372-25213403)
chr2 (180-237)||(25305769-25305826)
chr2 (164-196)||(7507757-7507789)
chr2 (164-196)||(17396567-17396599)
chr2 (185-237)||(19660221-19660273)
chr2 (164-196)||(20015328-20015360)
chr2 (164-196)||(28031134-28031166)
chr2 (130-196)||(31146073-31146138)
chr2 (164-196)||(33128372-33128404)
[»] chr7 (47 HSPs)
chr7 (9-237)||(3060116-3060344)
chr7 (3-196)||(16211910-16212103)
chr7 (3-196)||(13036938-13037133)
chr7 (3-196)||(36052808-36053003)
chr7 (3-196)||(11580661-11580858)
chr7 (1-122)||(11516369-11516490)
chr7 (1-122)||(15441564-15441685)
chr7 (1-122)||(30262129-30262250)
chr7 (1-122)||(7293158-7293279)
chr7 (3-122)||(47481031-47481150)
chr7 (12-122)||(25292338-25292448)
chr7 (3-115)||(18253842-18253954)
chr7 (29-121)||(13321186-13321278)
chr7 (164-239)||(32493903-32493978)
chr7 (1-106)||(13572819-13572924)
chr7 (3-104)||(16478968-16479069)
chr7 (164-239)||(126738-126813)
chr7 (164-239)||(1936874-1936949)
chr7 (1-110)||(10989552-10989661)
chr7 (1-110)||(13911024-13911133)
chr7 (164-239)||(111126-111201)
chr7 (1-194)||(295893-296087)
chr7 (1-111)||(2437600-2437710)
chr7 (165-239)||(7283913-7283987)
chr7 (130-237)||(13377819-13377924)
chr7 (80-122)||(14113989-14114031)
chr7 (80-122)||(14423639-14423681)
chr7 (90-196)||(36024372-36024485)
chr7 (180-237)||(13389693-13389750)
chr7 (164-196)||(2029244-2029276)
chr7 (164-196)||(7293333-7293365)
chr7 (164-196)||(11516544-11516576)
chr7 (164-196)||(14113903-14113935)
chr7 (164-196)||(15441478-15441510)
chr7 (127-196)||(15709428-15709501)
chr7 (164-196)||(30262043-30262075)
chr7 (164-196)||(42056188-42056220)
chr7 (33-106)||(16914928-16915002)
chr7 (180-230)||(17223796-17223846)
chr7 (29-115)||(48622665-48622751)
chr7 (164-196)||(371417-371449)
chr7 (164-196)||(3049905-3049937)
chr7 (164-196)||(13321334-13321366)
chr7 (164-192)||(15516765-15516793)
chr7 (181-237)||(16919870-16919926)
chr7 (164-196)||(25124450-25124482)
chr7 (164-196)||(47480944-47480976)
[»] scaffold0266 (2 HSPs)
scaffold0266 (3-196)||(1268-1462)
scaffold0266 (3-196)||(3508-3701)
[»] chr8 (33 HSPs)
chr8 (20-239)||(16404857-16405077)
chr8 (3-196)||(16193643-16193835)
chr8 (3-196)||(24928716-24928910)
chr8 (3-196)||(43373392-43373587)
chr8 (1-122)||(5238229-5238350)
chr8 (1-122)||(22907214-22907335)
chr8 (1-122)||(24661248-24661369)
chr8 (1-122)||(43685688-43685809)
chr8 (164-239)||(274766-274841)
chr8 (164-239)||(641008-641083)
chr8 (164-239)||(826814-826889)
chr8 (3-110)||(6774258-6774365)
chr8 (3-110)||(24549126-24549233)
chr8 (164-239)||(24716719-24716794)
chr8 (1-122)||(17345711-17345832)
chr8 (1-106)||(21844576-21844681)
chr8 (1-106)||(21851969-21852074)
chr8 (1-110)||(30120865-30120974)
chr8 (164-239)||(39115598-39115673)
chr8 (1-110)||(16674392-16674501)
chr8 (164-196)||(5238404-5238436)
chr8 (164-196)||(22907128-22907160)
chr8 (164-196)||(24385652-24385684)
chr8 (164-196)||(24661162-24661194)
chr8 (164-196)||(43685863-43685895)
chr8 (52-106)||(23226076-23226131)
chr8 (29-106)||(26011663-26011741)
chr8 (180-237)||(17285543-17285600)
chr8 (180-237)||(21198005-21198062)
chr8 (65-106)||(23149985-23150026)
chr8 (164-196)||(2545265-2545297)
chr8 (164-196)||(3431176-3431208)
chr8 (164-196)||(22886654-22886686)
[»] chr4 (28 HSPs)
chr4 (20-239)||(54118125-54118346)
chr4 (3-196)||(122033-122226)
chr4 (3-196)||(13246574-13246769)
chr4 (1-122)||(26680342-26680463)
chr4 (10-196)||(15675009-15675201)
chr4 (1-122)||(10488704-10488825)
chr4 (1-122)||(16327926-16328047)
chr4 (10-196)||(10104170-10104362)
chr4 (49-196)||(33240890-33241043)
chr4 (1-122)||(13048221-13048342)
chr4 (164-239)||(25119064-25119139)
chr4 (1-106)||(10644362-10644467)
chr4 (10-95)||(31115780-31115865)
chr4 (164-239)||(5682385-5682460)
chr4 (90-196)||(31132545-31132657)
chr4 (1-110)||(47357797-47357906)
chr4 (1-106)||(40885570-40885676)
chr4 (164-237)||(41165808-41165881)
chr4 (164-196)||(14952085-14952117)
chr4 (164-196)||(15135907-15135939)
chr4 (164-196)||(15272211-15272243)
chr4 (164-196)||(16327840-16327872)
chr4 (164-196)||(16609013-16609045)
chr4 (164-196)||(26680517-26680549)
chr4 (180-237)||(47534933-47534990)
chr4 (164-196)||(8045272-8045304)
chr4 (65-105)||(13809511-13809551)
chr4 (164-196)||(16523146-16523178)
[»] scaffold0023 (3 HSPs)
scaffold0023 (3-196)||(48742-48935)
scaffold0023 (1-88)||(36236-36323)
scaffold0023 (164-196)||(61122-61154)
[»] scaffold0106 (1 HSPs)
scaffold0106 (9-196)||(41879-42066)
[»] scaffold0018 (1 HSPs)
scaffold0018 (3-194)||(51110-51301)
[»] scaffold0413 (1 HSPs)
scaffold0413 (11-196)||(5990-6175)
[»] scaffold0175 (1 HSPs)
scaffold0175 (11-196)||(882-1067)
[»] chr5 (36 HSPs)
chr5 (3-196)||(23507109-23507302)
chr5 (3-196)||(27182471-27182666)
chr5 (10-196)||(18530988-18531179)
chr5 (1-122)||(20623111-20623232)
chr5 (1-122)||(21233528-21233649)
chr5 (1-122)||(16536339-16536460)
chr5 (1-122)||(37052886-37053007)
chr5 (10-196)||(22053753-22053945)
chr5 (1-120)||(25900408-25900527)
chr5 (1-122)||(34939419-34939540)
chr5 (3-110)||(29188284-29188391)
chr5 (1-106)||(27009984-27010089)
chr5 (1-107)||(43443398-43443504)
chr5 (1-110)||(4199985-4200094)
chr5 (1-110)||(19500042-19500151)
chr5 (1-110)||(22366481-22366590)
chr5 (1-110)||(25426771-25426880)
chr5 (165-239)||(11584374-11584448)
chr5 (1-107)||(18777995-18778101)
chr5 (1-110)||(12517-12626)
chr5 (1-110)||(21073595-21073704)
chr5 (29-115)||(32950865-32950951)
chr5 (164-196)||(16105967-16105999)
chr5 (164-196)||(20623286-20623318)
chr5 (164-196)||(21233442-21233474)
chr5 (164-196)||(25900320-25900352)
chr5 (164-196)||(37053061-37053093)
chr5 (33-106)||(21310709-21310783)
chr5 (33-106)||(29918138-29918212)
chr5 (164-237)||(5450695-5450768)
chr5 (180-237)||(19862547-19862604)
chr5 (180-237)||(21222462-21222519)
chr5 (65-106)||(23981516-23981557)
chr5 (164-196)||(108728-108760)
chr5 (164-196)||(9730278-9730310)
chr5 (164-196)||(16536514-16536546)
[»] scaffold0001 (2 HSPs)
scaffold0001 (3-196)||(172049-172242)
scaffold0001 (3-196)||(177752-177945)
[»] scaffold0162 (3 HSPs)
scaffold0162 (3-196)||(26340-26534)
scaffold0162 (10-122)||(8180-8292)
scaffold0162 (180-237)||(6877-6934)
[»] scaffold0008 (2 HSPs)
scaffold0008 (14-196)||(128095-128277)
scaffold0008 (1-88)||(31697-31784)
[»] scaffold0077 (2 HSPs)
scaffold0077 (3-197)||(36836-37032)
scaffold0077 (165-239)||(15324-15398)
[»] chr6 (35 HSPs)
chr6 (3-196)||(23153591-23153786)
chr6 (1-195)||(14626045-14626239)
chr6 (10-122)||(35009439-35009551)
chr6 (1-122)||(1657748-1657869)
chr6 (164-239)||(19983149-19983224)
chr6 (164-239)||(35015014-35015089)
chr6 (1-122)||(15862613-15862734)
chr6 (127-196)||(23148266-23148335)
chr6 (3-197)||(1650020-1650212)
chr6 (164-239)||(18583640-18583715)
chr6 (39-122)||(27751605-27751688)
chr6 (1-110)||(25175706-25175815)
chr6 (1-110)||(27653983-27654092)
chr6 (29-122)||(29666044-29666137)
chr6 (1-110)||(16825752-16825863)
chr6 (180-237)||(21623506-21623563)
chr6 (164-196)||(18002395-18002427)
chr6 (164-196)||(23995247-23995279)
chr6 (164-196)||(26090059-26090091)
chr6 (164-195)||(4991396-4991427)
chr6 (52-106)||(16887792-16887847)
chr6 (33-104)||(17083200-17083271)
chr6 (52-106)||(35136013-35136068)
chr6 (166-196)||(15742120-15742150)
chr6 (33-106)||(18629608-18629682)
chr6 (180-237)||(22361619-22361676)
chr6 (29-106)||(29605619-29605696)
chr6 (65-106)||(33324898-33324939)
chr6 (164-196)||(1657661-1657693)
chr6 (165-237)||(14152632-14152704)
chr6 (164-196)||(15862789-15862821)
chr6 (164-196)||(18823283-18823315)
chr6 (164-196)||(18839138-18839170)
chr6 (164-196)||(27751742-27751774)
chr6 (164-196)||(32276659-32276691)
[»] scaffold0302 (1 HSPs)
scaffold0302 (3-196)||(12257-12450)
[»] scaffold0195 (2 HSPs)
scaffold0195 (3-193)||(19350-19543)
scaffold0195 (3-122)||(21434-21553)
[»] scaffold0012 (2 HSPs)
scaffold0012 (3-196)||(247366-247561)
scaffold0012 (164-196)||(34075-34107)
[»] scaffold0028 (4 HSPs)
scaffold0028 (20-196)||(89378-89556)
scaffold0028 (71-196)||(107708-107835)
scaffold0028 (52-106)||(79731-79786)
scaffold0028 (164-195)||(130880-130911)
[»] scaffold0218 (1 HSPs)
scaffold0218 (3-186)||(4996-5180)
[»] scaffold0498 (1 HSPs)
scaffold0498 (10-196)||(9029-9215)
[»] scaffold0009 (1 HSPs)
scaffold0009 (3-196)||(272169-272362)
[»] scaffold0011 (1 HSPs)
scaffold0011 (3-196)||(123087-123283)
[»] scaffold0141 (4 HSPs)
scaffold0141 (1-122)||(26937-27058)
scaffold0141 (1-115)||(22682-22796)
scaffold0141 (164-196)||(22857-22889)
scaffold0141 (164-196)||(27112-27144)
[»] scaffold0124 (2 HSPs)
scaffold0124 (1-122)||(1582-1703)
scaffold0124 (164-196)||(1496-1528)
[»] scaffold0078 (3 HSPs)
scaffold0078 (1-122)||(37066-37187)
scaffold0078 (164-239)||(41632-41707)
scaffold0078 (164-196)||(36980-37012)
[»] scaffold0025 (3 HSPs)
scaffold0025 (10-196)||(9000-9192)
scaffold0025 (96-196)||(146838-146938)
scaffold0025 (3-148)||(148865-149012)
[»] scaffold0772 (2 HSPs)
scaffold0772 (4-115)||(5674-5785)
scaffold0772 (164-196)||(5846-5878)
[»] scaffold0132 (3 HSPs)
scaffold0132 (10-122)||(13657-13769)
scaffold0132 (164-239)||(42677-42749)
scaffold0132 (164-196)||(13824-13856)
[»] scaffold0049 (2 HSPs)
scaffold0049 (3-115)||(48331-48443)
scaffold0049 (165-239)||(20493-20567)
[»] scaffold1542 (1 HSPs)
scaffold1542 (20-122)||(534-636)
[»] scaffold0125 (2 HSPs)
scaffold0125 (10-122)||(41799-41911)
scaffold0125 (156-196)||(41957-41997)
[»] scaffold0026 (3 HSPs)
scaffold0026 (3-115)||(107891-108003)
scaffold0026 (1-106)||(64527-64637)
scaffold0026 (65-107)||(89863-89905)
[»] scaffold0075 (1 HSPs)
scaffold0075 (11-122)||(34460-34571)
[»] scaffold0034 (1 HSPs)
scaffold0034 (164-239)||(80187-80262)
[»] scaffold0116 (2 HSPs)
scaffold0116 (1-106)||(178-283)
scaffold0116 (164-239)||(30417-30492)
[»] scaffold0016 (3 HSPs)
scaffold0016 (163-239)||(166121-166197)
scaffold0016 (163-238)||(162036-162111)
scaffold0016 (164-237)||(116410-116483)
[»] scaffold0420 (1 HSPs)
scaffold0420 (3-110)||(13325-13432)
[»] scaffold0184 (1 HSPs)
scaffold0184 (164-239)||(31137-31212)
[»] scaffold0686 (2 HSPs)
scaffold0686 (164-238)||(5735-5809)
scaffold0686 (164-238)||(5941-6015)
[»] scaffold0215 (2 HSPs)
scaffold0215 (3-88)||(9371-9456)
scaffold0215 (3-88)||(16269-16354)
[»] scaffold0529 (1 HSPs)
scaffold0529 (10-111)||(3114-3215)
[»] scaffold0342 (1 HSPs)
scaffold0342 (163-239)||(309-385)
[»] scaffold0076 (1 HSPs)
scaffold0076 (1-87)||(43140-43226)
[»] scaffold1711 (1 HSPs)
scaffold1711 (1-110)||(1304-1413)
[»] scaffold0139 (2 HSPs)
scaffold0139 (1-88)||(14083-14170)
scaffold0139 (1-111)||(21115-21225)
[»] scaffold0022 (2 HSPs)
scaffold0022 (1-72)||(5254-5325)
scaffold0022 (65-105)||(102923-102963)
[»] scaffold1164 (1 HSPs)
scaffold1164 (165-239)||(1701-1775)
[»] scaffold0122 (2 HSPs)
scaffold0122 (165-239)||(19807-19881)
scaffold0122 (165-239)||(24111-24185)
[»] scaffold0361 (1 HSPs)
scaffold0361 (29-122)||(3360-3453)
[»] scaffold0876 (1 HSPs)
scaffold0876 (165-235)||(94-164)
[»] scaffold0310 (2 HSPs)
scaffold0310 (165-239)||(6261-6335)
scaffold0310 (165-202)||(4-41)
[»] scaffold0369 (1 HSPs)
scaffold0369 (12-72)||(3876-3936)
[»] scaffold0084 (1 HSPs)
scaffold0084 (1-115)||(56106-56222)
[»] scaffold0467 (1 HSPs)
scaffold0467 (29-196)||(10256-10424)
[»] scaffold0123 (1 HSPs)
scaffold0123 (39-106)||(8189-8257)
[»] scaffold0058 (2 HSPs)
scaffold0058 (53-106)||(70307-70361)
scaffold0058 (164-196)||(57392-57424)
[»] scaffold0507 (1 HSPs)
scaffold0507 (164-237)||(1363-1436)
[»] scaffold0456 (2 HSPs)
scaffold0456 (65-106)||(1546-1587)
scaffold0456 (65-106)||(8691-8732)
[»] scaffold0013 (1 HSPs)
scaffold0013 (180-237)||(35816-35873)
[»] scaffold0004 (1 HSPs)
scaffold0004 (164-197)||(193396-193429)
[»] scaffold0706 (1 HSPs)
scaffold0706 (164-196)||(6443-6475)
[»] scaffold0597 (1 HSPs)
scaffold0597 (164-196)||(878-910)
[»] scaffold0465 (1 HSPs)
scaffold0465 (164-196)||(9882-9914)
[»] scaffold0251 (1 HSPs)
scaffold0251 (164-196)||(13285-13317)
[»] scaffold0032 (5 HSPs)
scaffold0032 (164-196)||(55904-55936)
scaffold0032 (164-196)||(108075-108107)
scaffold0032 (65-106)||(93773-93814)
scaffold0032 (164-237)||(104477-104550)
scaffold0032 (39-106)||(104623-104691)
[»] scaffold0207 (1 HSPs)
scaffold0207 (153-196)||(18015-18058)
[»] scaffold0066 (2 HSPs)
scaffold0066 (29-72)||(45201-45244)
scaffold0066 (164-196)||(45338-45370)
[»] scaffold0409 (2 HSPs)
scaffold0409 (68-106)||(1348-1386)
scaffold0409 (68-106)||(9603-9641)
[»] scaffold0389 (1 HSPs)
scaffold0389 (52-105)||(10854-10908)
[»] scaffold0151 (1 HSPs)
scaffold0151 (53-106)||(22422-22476)
[»] scaffold1295 (1 HSPs)
scaffold1295 (180-237)||(442-499)
[»] scaffold0053 (1 HSPs)
scaffold0053 (180-237)||(76699-76756)
[»] scaffold0367 (1 HSPs)
scaffold0367 (164-196)||(17209-17241)
[»] scaffold0335 (1 HSPs)
scaffold0335 (164-196)||(5476-5508)
[»] scaffold0303 (1 HSPs)
scaffold0303 (164-196)||(4346-4378)
[»] scaffold0234 (1 HSPs)
scaffold0234 (164-196)||(17304-17336)
[»] scaffold0173 (1 HSPs)
scaffold0173 (164-196)||(5549-5581)
[»] scaffold0138 (1 HSPs)
scaffold0138 (39-106)||(22429-22497)
[»] scaffold0118 (1 HSPs)
scaffold0118 (164-196)||(34308-34340)
[»] scaffold0039 (1 HSPs)
scaffold0039 (164-196)||(12418-12450)


Alignment Details
Target: chr3 (Bit Score: 215; Significance: 1e-118; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 16744236 - 16743998
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  16744236 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacacttattatcaattcatggatacaaacatatcatcaaagttggagcac 16744137  T
Q  101 gaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaatta 200  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||    
T  16744136 gaatttaacaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatggtaaagactaacctcgttaccttaatta 16744037  T
Q  201 tctccaactattagctctagcttcactttagctcctatg 239  Q
    |||||||||||||||||||||||||||||||||||||||    
T  16744036 tctccaactattagctctagcttcactttagctcctatg 16743998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 14842682 - 14842487
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||| ||||||||||| |||| || ||| ||||| ||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||    
T  14842682 ataacttatcatttttacacatttgaacatgcaatttcaccaacaatcatacaattatcttcaattcatgcatacaaacatatcatcacagttggagcac 14842583  T
Q  101 gaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 196  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||| ||||| |||| ||| ||||||||||||||||||||||||||||||||||    
T  14842582 gaatttagcaacaattatccataatcacaattcatacaacatttgagaatttgcaaagtgaagatgattatgataaagactaacccccttacctta 14842487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 3 - 196
Target Start/End: Original strand, 13839038 - 13839232
Alignment:
Q  3 aacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 102  Q
    ||||| |||||| | | ||||| || ||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  13839038 aacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacga 13839137  T
Q  103 atttagcaacaatcatccataatcaaaattcatacaacatttgaaaattt-acaaaatgatgatgattatgataaagactaacccccttacctta 196  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  13839138 atttagcaacaattattcataatcaaaattcatacaacatttgaaaatttcacaaaatgatgatgattatgatgaagactaacccccttacctta 13839232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 3 - 196
Target Start/End: Complemental strand, 12030266 - 12030073
Alignment:
Q  3 aacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 102  Q
    ||||| ||| |||||||||||| || ||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  12030266 aacttatcacttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacga 12030167  T
Q  103 atttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 196  Q
    ||||||||||||| |||||||| ||||| ||||||||||||||||| || |||||||||||||||||||||||| || ||||||||||||||||    
T  12030166 atttagcaacaattatccataagcaaaagtcatacaacatttgaaatttcacaaaatgatgatgattatgataatgattaacccccttacctta 12030073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 9 - 196
Target Start/End: Original strand, 2049960 - 2050147
Alignment:
Q  9 tcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttag 108  Q
    |||| ||||||||||| || ||||||||| |||||||||| ||||||||| ||||||||| ||||||||||||||| ||| |||||||||||||||||||    
T  2049960 tcatgtttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcaggcatacaaacatatcgtcacagttggagcacgaatttag 2050059  T
Q  109 caacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 196  Q
    ||||||| |||||||| ||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  2050060 caacaattatccataagcaaaattgatacaacatttgaaatttcacaaaatgatgatgattatgataaagactaacccccttacctta 2050147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 60 - 239
Target Start/End: Original strand, 19231982 - 19232164
Alignment:
Q  60 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaattt-acaa 156  Q
    ||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||| |||||| ||   |||||||||||||||||||||||||| ||||    
T  19231982 atcaattcatgaatataaacatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttcacaa 19232081  T
Q  157 aatgatgatgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatg 239  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  19232082 aatgatgatgattaagataaagactaacccccttaccttaattatctccaactattagctctaacttcacttttgctcctatg 19232164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 2449359 - 2449238
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2449359 ataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 2449260  T
Q  101 gaatttagcaacaatcatccat 122  Q
    ||||||||||||||| ||||||    
T  2449259 gaatttagcaacaattatccat 2449238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 17912603 - 17912483
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  17912603 ataacttttcatttttacatatttaaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatc-aagttggagcac 17912505  T
Q  101 gaatttagcaacaatcatccat 122  Q
    ||||||||||||||| ||||||    
T  17912504 gaatttagcaacaattatccat 17912483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 3 - 132
Target Start/End: Complemental strand, 51158137 - 51158008
Alignment:
Q  3 aacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 102  Q
    ||||| |||||||||||||||| || ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  51158137 aacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacga 51158038  T
Q  103 atttagcaacaatcatccataatcaaaatt 132  Q
    ||||||||||||| |||||||| |||||||    
T  51158037 atttagcaacaattatccataagcaaaatt 51158008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 76 - 196
Target Start/End: Complemental strand, 19260869 - 19260749
Alignment:
Q  76 aaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgata 175  Q
    ||||||||||||| | || ||||||||||||||||||||| ||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  19260869 aaacatatcatcataattagagcacgaatttagcaacaattatccataaaaaaaattcatacaacatttgaaaacttacaaaatgatgatgattatgata 19260770  T
Q  176 aagactaacccccttacctta 196  Q
    |||||||||||||||||||||    
T  19260769 aagactaacccccttacctta 19260749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 3 - 159
Target Start/End: Complemental strand, 15859143 - 15858986
Alignment:
Q  3 aacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 102  Q
    ||||| |||||| | ||||||| || ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  15859143 aacttatcatttgttcatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacga 15859044  T
Q  103 atttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaat 159  Q
    ||||||||||||| |||||| ||   ||||||||||||||| ||| |||||||||||||    
T  15859043 atttagcaacaattatccattatgcaaaaattcatacaacaattg-aaatttacaaaat 15858986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 13975842 - 13975722
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||| |||||||||| |||||||| ||||||||  ||||||||||||||||| || | |||||||||||||| ||||||||||||||||||||||||    
T  13975842 ataacttatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatac-aacatatcatcaaagttggagcac 13975744  T
Q  101 gaatttagcaacaatcatccat 122  Q
    ||||||||||||||| ||||||    
T  13975743 gaatttagcaacaattatccat 13975722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 45860948 - 45861068
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||| |||||||||| |||||||| ||||||||  ||||||||||||||||| || | |||||||||||||| ||||||||||||||||||||||||    
T  45860948 ataacttatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatac-aacatatcatcaaagttggagcac 45861046  T
Q  101 gaatttagcaacaatcatccat 122  Q
    ||||||||||||||| ||||||    
T  45861047 gaatttagcaacaattatccat 45861068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 15936746 - 15936634
Alignment:
Q  3 aacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 102  Q
    ||||| ||||||||||| |||| || ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||    
T  15936746 aacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattacagttggagcacga 15936647  T
Q  103 atttagcaacaat 115  Q
    |||||| ||||||    
T  15936646 atttagtaacaat 15936634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 9 - 122
Target Start/End: Complemental strand, 13955002 - 13954890
Alignment:
Q  9 tcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttag 108  Q
    |||||||||| |||||||| ||||||||  ||||||||||||||||| || | |||||||||||||||| ||||||||||||||||||||||||||||||    
T  13955002 tcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatacaa-catatcatcaaagttggagcacgaatttag 13954904  T
Q  109 caacaatcatccat 122  Q
    ||||||| ||||||    
T  13954903 caacaattatccat 13954890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 161 - 239
Target Start/End: Complemental strand, 15857198 - 15857120
Alignment:
Q  161 atgatgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatg 239  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  15857198 atgatgattatgatgaagactaacccccttaccttaattatctccaagtattagctctagcttcactttagctcctatg 15857120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 164 - 239
Target Start/End: Original strand, 3992873 - 3992948
Alignment:
Q  164 atgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatg 239  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  3992873 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 3992948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 164 - 239
Target Start/End: Original strand, 55513193 - 55513268
Alignment:
Q  164 atgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatg 239  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  55513193 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 55513268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 15938588 - 15938476
Alignment:
Q  3 aacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 102  Q
    ||||| ||||||||||| |||| || ||||||||| |||||||||||||||||||| |||||||||||  |||||||||||||| | ||||||||||||     
T  15938588 aacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgattacaaacatatcattacagttggagcacgt 15938489  T
Q  103 atttagcaacaat 115  Q
    |||||| ||||||    
T  15938488 atttagtaacaat 15938476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 164 - 239
Target Start/End: Original strand, 2844514 - 2844589
Alignment:
Q  164 atgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatg 239  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  2844514 atgattatgataaaaactaacccccttaccttaattatctcaaactattagctctagcttcacttttgctcctatg 2844589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 164 - 239
Target Start/End: Complemental strand, 54038056 - 54037981
Alignment:
Q  164 atgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatg 239  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||    
T  54038056 atgattatgataaaaactaacccccttaccttaattatcaccaactattagctcaagcttcacttttgctcctatg 54037981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 164 - 239
Target Start/End: Complemental strand, 17955916 - 17955837
Alignment:
Q  164 atgattatgataaagactaacccccttaccttaattatctccaactattagct----ctagcttcactttagctcctatg 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||||| |||||||||    
T  17955916 atgattatgataaagactaacccccttaccttaattatctccaactattagctctacctagcttcacttttgctcctatg 17955837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 3 - 197
Target Start/End: Original strand, 15614978 - 15615170
Alignment:
Q  3 aacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 102  Q
    ||||| |||||||||||||||| || ||||||||| |||||||||| ||||||||| ||||||||||||||||||| ||| || || |||  |||||| |    
T  15614978 aacttatcatttttacatatttgaacatgtaatttcaccaacaatcctacaattatcatcaattcatgcatacaaatataacaccacagtaagagcacaa 15615077  T
Q  103 atttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaa 197  Q
    || |||||  |||  | ||| || | |  ||||||||||||  |||||  | |||||| |  ||||||||||||||||||||||||||||||||||    
T  15615078 atctagcatgaattgttcatcaacccattttcatacaacatgagaaaa--tgcaaaatta-catgattatgataaagactaacccccttaccttaa 15615170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 164 - 239
Target Start/End: Original strand, 7854305 - 7854380
Alignment:
Q  164 atgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatg 239  Q
    ||||||||||| || |||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||    
T  7854305 atgattatgatgaaaactaacccccttaccttaattatcaccaactattagctcaagcttcacttttgctcctatg 7854380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 16821291 - 16821369
Alignment:
Q  10 catttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatca 88  Q
    ||||||||||||||| || ||||||||| |||||||||||||||||||| ||||||| ||||||||||||||| |||||    
T  16821291 catttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacataacatca 16821369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 55316362 - 55316471
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||| |||||||| ||||| | || ||||||||| |||||||||||||||| ||  ||||||||||||||||||||||| ||||| ||   ||||||    
T  55316362 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcac 55316461  T
Q  101 gaatttagca 110  Q
    ||||||||||    
T  55316462 gaatttagca 55316471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 45581954 - 45582016
Alignment:
Q  164 atgattatgataaagactaacccc-cttaccttaattatctccaactattagctctagcttca 225  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  45581954 atgattatgataaaaactaaccccccttaccttaattatctccaactattagctctagcttca 45582016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 41270218 - 41270327
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||| |||||||| ||||| | || ||||||||  |||||||||||||||| ||  ||||||||||||||||||||||| ||||| ||   ||||||    
T  41270218 ataacttatcatttttgcatatatgaacatgtaattccaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcac 41270317  T
Q  101 gaatttagca 110  Q
    ||||||||||    
T  41270318 gaatttagca 41270327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 52 - 106
Target Start/End: Original strand, 14080701 - 14080756
Alignment:
Q  52 caattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 106  Q
    ||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||    
T  14080701 caattatcatcaatttcatgcatacaaacatatcatcatagttggagcacgaattt 14080756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 196
Target Start/End: Original strand, 54651642 - 54651796
Alignment:
Q  43 acaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat-aatcaaaattcatacaaca 141  Q
    |||||||||||||||| ||||||||||||| |  || ||| ||||| ||   ||||||||||||||||||||| || ||| || | |  |||||||||||    
T  54651642 acaatcatacaattatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattattcatcaacccattttcatacaaca 54651741  T
Q  142 tttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 196  Q
    |  |||| |  | ||| |||  ||||||||||| ||||| |||||||||||||||    
T  54651742 tgagaaattgcaaaaattgaacatgattatgatgaagacaaacccccttacctta 54651796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 115
Target Start/End: Complemental strand, 11986259 - 11986173
Alignment:
Q  29 atgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 115  Q
    ||||||||| | | |||||||||||||||| || || ||||||| || || ||| ||||| |||| ||||||||||||| |||||||    
T  11986259 atgtaatttcaaccacaatcatacaattatcattaaatcatgcacacgaaaataacatcacagttagagcacgaatttaacaacaat 11986173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 237
Target Start/End: Original strand, 17205019 - 17205076
Alignment:
Q  180 ctaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 237  Q
    ||||||||||||||||||||||| |||| |  |||| | |||||||||||||||||||    
T  17205019 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 17205076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 237
Target Start/End: Complemental strand, 38810941 - 38810868
Alignment:
Q  164 atgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 237  Q
    ||||||||||| ||  ||||||||||||||||| ||||| |||| |  |||| | |||||||||||||||||||    
T  38810941 atgattatgatgaattctaacccccttaccttagttatcaccaattcctagcccaagcttcactttagctccta 38810868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 2449184 - 2449152
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    |||||||||||||||||||||||||||||||||    
T  2449184 atgattatgataaagactaacccccttacctta 2449152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 16261777 - 16261809
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    |||||||||||||||||||||||||||||||||    
T  16261777 atgattatgataaagactaacccccttacctta 16261809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 16933901 - 16933869
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    |||||||||||||||||||||||||||||||||    
T  16933901 atgattatgataaagactaacccccttacctta 16933869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 17912430 - 17912398
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    |||||||||||||||||||||||||||||||||    
T  17912430 atgattatgataaagactaacccccttacctta 17912398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 23492696 - 23492728
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    |||||||||||||||||||||||||||||||||    
T  23492696 atgattatgataaagactaacccccttacctta 23492728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 38168237 - 38168269
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    |||||||||||||||||||||||||||||||||    
T  38168237 atgattatgataaagactaacccccttacctta 38168269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 53771365 - 53771397
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    |||||||||||||||||||||||||||||||||    
T  53771365 atgattatgataaagactaacccccttacctta 53771397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 237
Target Start/End: Original strand, 12031849 - 12031904
Alignment:
Q  182 aacccccttaccttaattatctccaactattagctctagcttcactttagctccta 237  Q
    ||||||||||||||||||||| |||| |  |||| | |||||||||||||||||||    
T  12031849 aacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 12031904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 237
Target Start/End: Complemental strand, 13301396 - 13301323
Alignment:
Q  164 atgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 237  Q
    ||||||||||| ||  ||||||||||||||||||||| | | || |  |||| | |||||||||||||||||||    
T  13301396 atgattatgatgaattctaacccccttaccttaattagcacaaattcctagcccaagcttcactttagctccta 13301323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 237
Target Start/End: Complemental strand, 13312052 - 13311979
Alignment:
Q  164 atgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 237  Q
    ||||||||||| ||  ||||||||||||||||||||| | | || |  |||| | |||||||||||||||||||    
T  13312052 atgattatgatgaattctaacccccttaccttaattagcacaaattcctagcccaagcttcactttagctccta 13311979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 237
Target Start/End: Original strand, 17191879 - 17191936
Alignment:
Q  180 ctaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 237  Q
    ||||||||||||||||||||||| |||| |  |||| | | |||||||||||||||||    
T  17191879 ctaacccccttaccttaattatcaccaattcctagcccaaacttcactttagctccta 17191936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 11986112 - 11986080
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    ||||||||||| |||||||||||||||||||||    
T  11986112 atgattatgatgaagactaacccccttacctta 11986080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 13954836 - 13954804
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    ||||||||| |||||||||||||||||||||||    
T  13954836 atgattatggtaaagactaacccccttacctta 13954804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 14285289 - 14285321
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    ||||||||||| |||||||||||||||||||||    
T  14285289 atgattatgatgaagactaacccccttacctta 14285321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 19947026 - 19947058
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    ||||||||||| |||||||||||||||||||||    
T  19947026 atgattatgatgaagactaacccccttacctta 19947058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 30153265 - 30153297
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    |||||||||||||| ||||||||||||||||||    
T  30153265 atgattatgataaaaactaacccccttacctta 30153297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 33342204 - 33342236
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    ||||||||||||||||||||||| |||||||||    
T  33342204 atgattatgataaagactaaccctcttacctta 33342236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 45861122 - 45861154
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    ||||||||| |||||||||||||||||||||||    
T  45861122 atgattatggtaaagactaacccccttacctta 45861154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 51961063 - 51961031
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    ||||||||||| |||||||||||||||||||||    
T  51961063 atgattatgatgaagactaacccccttacctta 51961031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 205; Significance: 1e-112; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 3 - 239
Target Start/End: Original strand, 41394366 - 41394602
Alignment:
Q  3 aacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 102  Q
    ||||| |||||||||||||||| || |||||| || |||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||||    
T  41394366 aacttatcatttttacatatttgaacatgtaacttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcatcatagttggagcacga 41394465  T
Q  103 atttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaattatc 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41394466 atttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaattatc 41394565  T
Q  203 tccaactattagctctagcttcactttagctcctatg 239  Q
    |||||||||||||||||||||||||||||||||||||    
T  41394566 tccaactattagctctagcttcactttagctcctatg 41394602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 20913172 - 20913367
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||| |||||||||||||| | || ||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  20913172 ataacttatcatttttacatatatgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttggagcac 20913271  T
Q  101 gaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 196  Q
    ||||||||||||||| |||| ||| |||||||||||||||| |||||||||| |||||||| |||||||| |||||||||||||||||||||||||    
T  20913272 gaatttagcaacaattatccgtaagcaaaattcatacaacaattgaaaatttgcaaaatgaggatgattacgataaagactaacccccttacctta 20913367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 20931487 - 20931682
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||| |||||||||||||| | || ||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  20931487 ataacttatcatttttacatatatgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttggagcac 20931586  T
Q  101 gaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 196  Q
    ||||||||||||||| |||||||| |||| ||||||||||| |||||||||| |||||||| |||||||||||||||| |||||||||||||||||    
T  20931587 gaatttagcaacaattatccataagcaaacttcatacaacaattgaaaatttgcaaaatgaggatgattatgataaaggctaacccccttacctta 20931682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 29 - 196
Target Start/End: Complemental strand, 37844543 - 37844374
Alignment:
Q  29 atgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--c 126  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||| ||       
T  37844543 atgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcatagttggagcatgaatttagcaacaattatccattatgca 37844444  T
Q  127 aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 196  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  37844443 aaaattcatacaacatttgaaaattcacaaaatgatgatgattatgataaagactaacccccttacctta 37844374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 29 - 196
Target Start/End: Original strand, 20445849 - 20446019
Alignment:
Q  29 atgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--c 126  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||| ||       
T  20445849 atgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacaattggagcacgaatttagcaacaattatccattatgca 20445948  T
Q  127 aaaattcatacaacatttgaaaattt-acaaaatgatgatgattatgataaagactaacccccttacctta 196  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  20445949 aaaattcatacaacatttgaaaatttcacaaaatgatgatgattatgataaagactaactcccttacctta 20446019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 3 - 196
Target Start/End: Complemental strand, 20893745 - 20893551
Alignment:
Q  3 aacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 102  Q
    ||||| |||||| | | ||||| || ||||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||    
T  20893745 aacttatcatttgttcctatttgaacatgtaatttcaacaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcaaga 20893646  T
Q  103 atttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 196  Q
    ||||||||||||| |||||| ||   ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  20893645 atttagcaacaattatccattatgcaaaaattcatacaacatttgaaaa-ttacaaaatgatgatgattatgatgaagactaacccccttacctta 20893551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 29 - 196
Target Start/End: Original strand, 20531614 - 20531783
Alignment:
Q  29 atgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--c 126  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||||||| |||| | |||||||||||||||||||||||| |||||| ||       
T  20531614 atgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatattatcacatttggagcacgaatttagcaacaattatccattatgca 20531713  T
Q  127 aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 196  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||   ||||||||||    
T  20531714 aaaattcatacaacatttgaaaattcacaaaatgatgatgattatgataaagactaatttccttacctta 20531783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 51452634 - 51452755
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  51452634 ataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttgaagcac 51452733  T
Q  101 gaatttagcaacaatcatccat 122  Q
    ||||||||||||||| ||||||    
T  51452734 gaatttagcaacaattatccat 51452755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 164 - 239
Target Start/End: Original strand, 21860334 - 21860409
Alignment:
Q  164 atgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatg 239  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  21860334 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 21860409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 164 - 238
Target Start/End: Complemental strand, 44034903 - 44034829
Alignment:
Q  164 atgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctat 238  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  44034903 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 44034829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 197
Target Start/End: Original strand, 45051567 - 45051759
Alignment:
Q  3 aacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 102  Q
    ||||| |||||||||||||||| || ||||||||| |||||||||||||||||||| |||||||||||||||||||| || ||||| |||  || |||||    
T  45051567 aacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacgtaacatcacagtaagaacacga 45051666  T
Q  103 atttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaa 197  Q
    || |||||  |||  | ||| || | |  ||||||||||||  |||||  | |||||| |  ||||||||||||||||||||||||||||||||||    
T  45051667 atctagcatgaattgttcatcaacccattttcatacaacatgagaaaa--tgcaaaatca-catgattatgataaagactaacccccttaccttaa 45051759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 2116399 - 2116506
Alignment:
Q  3 aacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 102  Q
    ||||| |||||||||||||||| || ||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||| |||   |||||||    
T  2116399 aacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagtaaaagcacga 2116498  T
Q  103 atttagca 110  Q
    || |||||    
T  2116499 atctagca 2116506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 22227951 - 22228146
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||| |||||||||||||||| || ||||||||| || ||||||||||||||||| ||||||||||||| |  || ||| ||||| ||   ||||||    
T  22227951 ataacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaattcatgcacaagaaaataacatcacagcaagagcac 22228050  T
Q  101 gaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctt 195  Q
    ||||||||||| |||  | ||| || | |  ||||||||||||  ||||||  | ||| ||   |||||||||||||  |||||||||||||||||    
T  22228051 gaatttagcaagaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataactaacccccttacctt 22228146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 22232648 - 22232843
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||| |||||||||||||||| || ||||||||| || ||||||||||||||||| ||||||||||||| |  || ||| ||||| ||   ||||||    
T  22232648 ataacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaattcatgcacaagaaaataacatcacagcaagagcac 22232747  T
Q  101 gaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctt 195  Q
    ||||||||||| |||  | ||| || | |  ||||||||||||  ||||||  | ||| ||   |||||||||||||  |||||||||||||||||    
T  22232748 gaatttagcaagaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataactaacccccttacctt 22232843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 164 - 239
Target Start/End: Original strand, 41218728 - 41218803
Alignment:
Q  164 atgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatg 239  Q
    ||||| ||||| || |||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||    
T  41218728 atgatcatgatgaaaactaacccccttaccttaattatcaccaactattagctcaagcttcacttttgctcctatg 41218803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 5072497 - 5072388
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||| |||||||| ||||| | || ||||||||| |||||||||||||||| ||  ||||||||||||||| ||||||| ||||| ||   ||||||    
T  5072497 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatataaacataacatcacagcaagagcac 5072398  T
Q  101 gaatttagca 110  Q
    ||||||||||    
T  5072397 gaatttagca 5072388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 18601227 - 18601118
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||| |||||||| ||||| | || ||||||||| |||||||||||||||| ||  ||||||||||||||||||||||| ||||| ||   |||||     
T  18601227 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcat 18601128  T
Q  101 gaatttagca 110  Q
    ||||||||||    
T  18601127 gaatttagca 18601118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 130 - 237
Target Start/End: Original strand, 27675086 - 27675191
Alignment:
Q  130 attcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcacttt 229  Q
    |||||||||||| |||||||||||||  |  |  | ||||||||||||  |||||||||||||||||||||||||||| |  |||| | |||||||||||    
T  27675086 attcatacaacaattgaaaatttacactaaaa--acgattatgataaattctaacccccttaccttaattatctccaattcctagcccaagcttcacttt 27675183  T
Q  230 agctccta 237  Q
    ||||||||    
T  27675184 agctccta 27675191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 195
Target Start/End: Complemental strand, 15861358 - 15861327
Alignment:
Q  164 atgattatgataaagactaacccccttacctt 195  Q
    ||||||||||||||||||||||||||||||||    
T  15861358 atgattatgataaagactaacccccttacctt 15861327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 237
Target Start/End: Complemental strand, 13376768 - 13376711
Alignment:
Q  180 ctaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 237  Q
    ||||||||||||||||||||||| |||| |  |||| | | |||||||||||||||||    
T  13376768 ctaacccccttaccttaattatcaccaattcctagcccaaacttcactttagctccta 13376711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 237
Target Start/End: Original strand, 20177513 - 20177570
Alignment:
Q  180 ctaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 237  Q
    |||||||| |||||||||||||| |||| |  |||| | |||||||||||||||||||    
T  20177513 ctaaccccattaccttaattatcaccaattcctagcccaagcttcactttagctccta 20177570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 106
Target Start/End: Complemental strand, 22143402 - 22143361
Alignment:
Q  65 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 106  Q
    |||||||||||||||| ||||||| |||| ||||||||||||    
T  22143402 ttcatgcatacaaacacatcatcatagttagagcacgaattt 22143361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 51452809 - 51452841
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    ||||||| |||||||||||||||||||||||||    
T  51452809 atgattaagataaagactaacccccttacctta 51452841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 172; Significance: 2e-92; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 9 - 239
Target Start/End: Complemental strand, 20627426 - 20627195
Alignment:
Q  9 tcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttag 108  Q
    ||||||||||||||||  | ||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||     
T  20627426 tcatttttacatatttggacatgtaatttcaccaacaatcatacaattatcatcaattcgtgcatacaaacatatcatcacagttggagcacgaatttaa 20627327  T
Q  109 caacaatcatccataatcaaaattcatacaacatttgaaaa-tttacaaaatgatgatgattatgataaagactaacccccttaccttaattatctccaa 207  Q
    ||||||| ||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  20627326 caacaattatccataatcataattcatacaatatttgaaaattttacaaaatgatgatgattatgataaagactaaccccgttaccttaattatctccaa 20627227  T
Q  208 ctattagctctagcttcactttagctcctatg 239  Q
    |||||||||||||||||||||| |||||||||    
T  20627226 ctattagctctagcttcacttttgctcctatg 20627195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 3 - 196
Target Start/End: Original strand, 462882 - 463075
Alignment:
Q  3 aacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 102  Q
    ||||| |||||||||||||||| || ||||||||| |||||||||| ||||||||| ||||||||||||||||||| ||||||||| |||||||||||||    
T  462882 aacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaatatatcatcacagttggagcacga 462981  T
Q  103 atttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 196  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  462982 atttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 463075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 3 - 239
Target Start/End: Complemental strand, 19794823 - 19794586
Alignment:
Q  3 aacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 102  Q
    ||||| |||||| | | ||||| || ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  19794823 aacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcacagttggagcacga 19794724  T
Q  103 atttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaatta 200  Q
    ||||| | ||||| |||||| ||   |||||||||||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  19794723 atttaacgacaattatccattatgcaaaaattcatacaacatttgaaa-tttacaaaataatgatgattatgatgaagactaacccccttaccttaatta 19794625  T
Q  201 tctccaactattagctctagcttcactttagctcctatg 239  Q
    ||||||||||||||||||||||||||||| |||| ||||    
T  19794624 tctccaactattagctctagcttcacttttgctcttatg 19794586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 20 - 239
Target Start/End: Complemental strand, 43643059 - 43642838
Alignment:
Q  20 tatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatc 119  Q
    ||||| || ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||| |||||||||||||| |||    
T  43643059 tatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacaattggagcacaaatttagcaacaattatc 43642960  T
Q  120 cataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaattatctccaactattagctc 217  Q
    ||  ||   ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  43642959 cactatgcaaaaattcatacaacatttgaaaattcacaaaatgatgatgattatgataaagactaacctccttcccttaattatctccaactattagctc 43642860  T
Q  218 tagcttcactttagctcctatg 239  Q
    |||||||||||| |||||||||    
T  43642859 tagcttcacttttgctcctatg 43642838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 3 - 196
Target Start/End: Complemental strand, 36982560 - 36982364
Alignment:
Q  3 aacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 102  Q
    ||||| |||||||||||||||| || ||||||||| |||| ||||| ||||||||| ||||||||||| ||||||||||||||||| |||||||||||||    
T  36982560 aacttatcatttttacatatttgaacatgtaatttcaccagcaatcttacaattatcatcaattcatgaatacaaacatatcatcacagttggagcacga 36982461  T
Q  103 atttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttac-aaaatgatgatgattatgataaagactaacccccttacctta 196  Q
    ||||||||||||| |||||| ||   |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  36982460 atttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaaatgatgatgattatgataaagactaacccccttacctta 36982364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 3 - 196
Target Start/End: Original strand, 8891386 - 8891581
Alignment:
Q  3 aacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 102  Q
    ||||| |||||| | | ||||| || |||||||||  ||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  8891386 aacttatcatttgttcctatttgaacatgtaatttcgccaacaatcatacaattatcatcaattcatgcatacaaacatattatcacagttggagcacga 8891485  T
Q  103 atttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 196  Q
    ||||||||||||| |||||| ||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  8891486 atttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccctttacctta 8891581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 19689522 - 19689401
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19689522 ataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 19689423  T
Q  101 gaatttagcaacaatcatccat 122  Q
    ||||||||||||||| ||||||    
T  19689422 gaatttagcaacaattatccat 19689401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 23820213 - 23820334
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23820213 ataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 23820312  T
Q  101 gaatttagcaacaatcatccat 122  Q
    ||||||||||||||| ||||||    
T  23820313 gaatttagcaacaattatccat 23820334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 14906561 - 14906440
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14906561 ataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 14906462  T
Q  101 gaatttagcaacaatcatccat 122  Q
    ||||||||||||||| ||||||    
T  14906461 gaatttagcaacaattatccat 14906440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 20015153 - 20015274
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||||||||||| ||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  20015153 ataacttttcattttcacatattcaaacatgtaatttaaccaacaatcacacaattattatcaattcatgcatgcaaacatatcatcaaagttggagcac 20015252  T
Q  101 gaatttagcaacaatcatccat 122  Q
    ||||||||||||||| ||||||    
T  20015253 gaatttagcaacaattatccat 20015274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 10 - 196
Target Start/End: Complemental strand, 24341501 - 24341309
Alignment:
Q  10 catttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagc 109  Q
    |||||||||||| || || || |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||| |||||||||    
T  24341501 catttttacataattgaacatataatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttgaagcatgaatttagc 24341402  T
Q  110 aacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatgataaagactaacccccttacctta 196  Q
    |||||| |||||  ||   ||||||||||| ||||||||||| || ||||    ||||||||||||||||| |||||||||||||||||||||    
T  24341401 aacaattatccaattatgaaaaattcataccacatttgaaaaattgcaaaaatgatgatgatgattatgatgaagactaacccccttacctta 24341309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 17396773 - 17396653
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||| |||||||||| |||||||| ||||||||| ||||||||||||||||| || | |||||||||||||| ||||||||||||||||||||||||    
T  17396773 ataacttatcatttttacttatttaaacatgtaatttcaccaacaatcatacaatcatcaacaattcatgcatac-aacatatcatcaaagttggagcac 17396675  T
Q  101 gaatttagcaacaatcatccat 122  Q
    ||||||||||||||| ||||||    
T  17396674 gaatttagcaacaattatccat 17396653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 10 - 122
Target Start/End: Complemental strand, 25265502 - 25265390
Alignment:
Q  10 catttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagc 109  Q
    |||||||||||| || || ||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  25265502 catttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcaaagttagagcacgaatttagc 25265403  T
Q  110 aacaatcatccat 122  Q
    |||||| ||||||    
T  25265402 aacaattatccat 25265390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 100 - 196
Target Start/End: Original strand, 22863169 - 22863267
Alignment:
Q  100 cgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 196  Q
    |||||||||||||||| |||||| ||   ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22863169 cgaatttagcaacaattatccattatgcaaaaattcatacaacaattgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 22863267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 164 - 239
Target Start/End: Original strand, 22275045 - 22275120
Alignment:
Q  164 atgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatg 239  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  22275045 atgattatgataaaggctaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 22275120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 164 - 239
Target Start/End: Original strand, 22284278 - 22284353
Alignment:
Q  164 atgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatg 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  22284278 atgattatgataaagactaacccccttaccttaattatctccaactattagctctaacttcacttttgctcctatg 22284353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 15633538 - 15633612
Alignment:
Q  165 tgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatg 239  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  15633538 tgattatgataaagactaacctccttaccttaattatctccaactattaactctagcttcacttttgctcctatg 15633612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 7507965 - 7507894
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgca 72  Q
    ||||||| | |||||||||||||| || ||||||||| |||||||||||||||||||| |||||||||||||    
T  7507965 ataacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 7507894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 19886770 - 19886661
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||| ||| |||| ||||| | || ||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| ||||| ||   ||||||    
T  19886770 ataacttatcacttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcac 19886671  T
Q  101 gaatttagca 110  Q
    ||||||||||    
T  19886670 gaatttagca 19886661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 197
Target Start/End: Complemental strand, 19689347 - 19689314
Alignment:
Q  164 atgattatgataaagactaacccccttaccttaa 197  Q
    ||||||||||||||||||||||||||||||||||    
T  19689347 atgattatgataaagactaacccccttaccttaa 19689314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 237
Target Start/End: Original strand, 43646232 - 43646289
Alignment:
Q  180 ctaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 237  Q
    ||||||||||||||||||||||| |||| |  |||| | |||||||||||||||||||    
T  43646232 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 43646289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 9652828 - 9652796
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    |||||||||||||||||||||||||||||||||    
T  9652828 atgattatgataaagactaacccccttacctta 9652796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 14906386 - 14906354
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    |||||||||||||||||||||||||||||||||    
T  14906386 atgattatgataaagactaacccccttacctta 14906354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 23820388 - 23820420
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    |||||||||||||||||||||||||||||||||    
T  23820388 atgattatgataaagactaacccccttacctta 23820420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 195
Target Start/End: Original strand, 25213372 - 25213403
Alignment:
Q  164 atgattatgataaagactaacccccttacctt 195  Q
    ||||||||||||||||||||||||||||||||    
T  25213372 atgattatgataaagactaacccccttacctt 25213403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 237
Target Start/End: Original strand, 25305769 - 25305826
Alignment:
Q  180 ctaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 237  Q
    ||||||||||||||||||||||| |||| |  |||| | |||||||||||| ||||||    
T  25305769 ctaacccccttaccttaattatcaccaattcatagcccaagcttcactttaactccta 25305826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 7507789 - 7507757
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    ||||||||||| |||||||||||||||||||||    
T  7507789 atgattatgatgaagactaacccccttacctta 7507757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 17396599 - 17396567
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    ||||||||| |||||||||||||||||||||||    
T  17396599 atgattatggtaaagactaacccccttacctta 17396567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 237
Target Start/End: Original strand, 19660221 - 19660273
Alignment:
Q  185 ccccttaccttaattatctccaactattagctctagcttcactttagctccta 237  Q
    |||||||||||||||||| |||| |  |||| | |||||||||||||||||||    
T  19660221 ccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 19660273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 20015328 - 20015360
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    ||||| |||||||||||||||||||||||||||    
T  20015328 atgatcatgataaagactaacccccttacctta 20015360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 28031166 - 28031134
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    ||||||||||| |||||||||||||||||||||    
T  28031166 atgattatgatgaagactaacccccttacctta 28031134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 196
Target Start/End: Complemental strand, 31146138 - 31146073
Alignment:
Q  130 attcatacaaca-tttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 196  Q
    |||||||||||| |||||||||||||| ||  | |||||||||||| ||  |||||||||||||||||    
T  31146138 attcatacaacaatttgaaaatttacacaa--aagatgattatgatgaattctaacccccttacctta 31146073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 33128372 - 33128404
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    ||||||||||| |||||||||||||||||||||    
T  33128372 atgattatgatgaagactaacccccttacctta 33128404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 161; Significance: 6e-86; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 9 - 237
Target Start/End: Original strand, 3060116 - 3060344
Alignment:
Q  9 tcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttag 108  Q
    |||||||||||||||| || ||||||||| ||||||| |  ||||||||| ||||||| ||||||||||| |||| |||| |||||||||||||||||||    
T  3060116 tcatttttacatatttgaacatgtaatttcaccaacagtattacaattatcatcaattaatgcatacaaatatattatcacagttggagcacgaatttag 3060215  T
Q  109 caacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaattatctccaac 208  Q
    ||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  3060216 caacaattatccataagcaaaattcatataacatttgaaaatttacaaaatgatgatgattatgataaagacttacccccttaccttcattatctccaac 3060315  T
Q  209 tattagctctagcttcactttagctccta 237  Q
    ||||||||||||||||||||| |||||||    
T  3060316 tattagctctagcttcacttttgctccta 3060344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 3 - 196
Target Start/End: Original strand, 16211910 - 16212103
Alignment:
Q  3 aacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 102  Q
    ||||| |||||||||||||||| || ||| ||||| || ||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  16211910 aacttatcatttttacatatttgaacatgcaatttcacaaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacga 16212009  T
Q  103 atttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 196  Q
    |||||||||||||  ||||||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  16212010 atttagcaacaattgtccataagcaaaattcatacaacatttgaaatttcacaaaatgatgatgattatgataaagactaacccccttacctta 16212103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 3 - 196
Target Start/End: Complemental strand, 13037133 - 13036938
Alignment:
Q  3 aacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 102  Q
    ||||| |||||| | | ||||| || ||| ||||| | |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  13037133 aacttatcatttgttcctatttgaacatgcaatttcatcaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacga 13037034  T
Q  103 atttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 196  Q
    ||||||||||||| |||||| ||   |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  13037033 atttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgattatggtgaagactaacccccttacctta 13036938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 3 - 196
Target Start/End: Original strand, 36052808 - 36053003
Alignment:
Q  3 aacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 102  Q
    ||||| |||||||||||||||| || ||||||||| ||||||||||||| |||||| |||||||||||||||||||| |||||||| |||||||| |  |    
T  36052808 aacttatcatttttacatatttgaacatgtaattttaccaacaatcatataattatcatcaattcatgcatacaaacgtatcatcacagttggagtataa 36052907  T
Q  103 atttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 196  Q
    ||||||||||||| |||||| ||   |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  36052908 atttagcaacaattatccattatacaaaaattcatacaacatttgaaatttcacaaaatgatgatgattatgataaagactaacccccttacctta 36053003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 3 - 196
Target Start/End: Complemental strand, 11580858 - 11580661
Alignment:
Q  3 aacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 102  Q
    ||||| |||||| | | ||||| || ||||||||| |||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  11580858 aacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatattatcacagttggagcacga 11580759  T
Q  103 atttagcaacaatcatccataat---caaaattcatacaacatttgaaaatttac-aaaatgatgatgattatgataaagactaacccccttacctta 196  Q
    ||||||||| ||| |||||| ||    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  11580758 atttagcaataattatccattatgcaaaaaattcatacaacatttgaaaatttacaaaaatgatgatgattatgataaagactaatccccttacctta 11580661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 11516369 - 11516490
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11516369 ataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 11516468  T
Q  101 gaatttagcaacaatcatccat 122  Q
    ||||||||||||||| ||||||    
T  11516469 gaatttagcaacaattatccat 11516490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 15441685 - 15441564
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15441685 ataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 15441586  T
Q  101 gaatttagcaacaatcatccat 122  Q
    ||||||||||||||| ||||||    
T  15441585 gaatttagcaacaattatccat 15441564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 30262250 - 30262129
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30262250 ataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 30262151  T
Q  101 gaatttagcaacaatcatccat 122  Q
    ||||||||||||||| ||||||    
T  30262150 gaatttagcaacaattatccat 30262129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 7293158 - 7293279
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  7293158 ataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattattaattcatgcatacaaacatatcatcaaagttggagcac 7293257  T
Q  101 gaatttagcaacaatcatccat 122  Q
    ||||||||||||||| ||||||    
T  7293258 gaatttagcaacaattatccat 7293279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 3 - 122
Target Start/End: Complemental strand, 47481150 - 47481031
Alignment:
Q  3 aacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 102  Q
    ||||| |||||||||||||||| || ||||||||| || ||||||||||||||||| ||||||||||||||||||||||| ||||| |||| ||||||||    
T  47481150 aacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagttagagcacga 47481051  T
Q  103 atttagcaacaatcatccat 122  Q
    ||||||||||||| ||||||    
T  47481050 atttagcaacaattatccat 47481031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 12 - 122
Target Start/End: Complemental strand, 25292448 - 25292338
Alignment:
Q  12 tttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaa 111  Q
    |||||||||||||||| ||||||||| ||||||||||||||||| || | |||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  25292448 tttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcaacaattcatacatacaaacatatcatcaaagttggagcacaaatttagcaa 25292349  T
Q  112 caatcatccat 122  Q
    |||| ||||||    
T  25292348 caattatccat 25292338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 18253954 - 18253842
Alignment:
Q  3 aacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 102  Q
    ||||| ||||||||||| |||| || ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||    
T  18253954 aacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattacagttggagcacga 18253855  T
Q  103 atttagcaacaat 115  Q
    |||||| ||||||    
T  18253854 atttagtaacaat 18253842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 29 - 121
Target Start/End: Original strand, 13321186 - 13321278
Alignment:
Q  29 atgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcca 121  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||| |||||    
T  13321186 atgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagcaacaattatcca 13321278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 164 - 239
Target Start/End: Complemental strand, 32493978 - 32493903
Alignment:
Q  164 atgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatg 239  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  32493978 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 32493903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 13572819 - 13572924
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||| ||||||||||||||||||| ||||||||| ||||||||||| ||||| || ||||||||||||||||||||||| ||||| ||   ||||||    
T  13572819 ataacttatcatttttacatatttaaacatgtaatttcaccaacaatcacacaatcatcatcaattcatgcatacaaacataacatcacagcaagagcac 13572918  T
Q  101 gaattt 106  Q
    ||||||    
T  13572919 gaattt 13572924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 16479069 - 16478968
Alignment:
Q  3 aacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 102  Q
    ||||| |||||||||||||||| || ||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||  |||  ||||||||    
T  16479069 aacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcgcagtaagagcacga 16478970  T
Q  103 at 104  Q
    ||    
T  16478969 at 16478968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 164 - 239
Target Start/End: Original strand, 126738 - 126813
Alignment:
Q  164 atgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatg 239  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||    
T  126738 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctaacttcatttttgctcctatg 126813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 164 - 239
Target Start/End: Complemental strand, 1936949 - 1936874
Alignment:
Q  164 atgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatg 239  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||| |||||    
T  1936949 atgattatgataaaaactaacctccttaccttaattatctccaactattaactctagcttcacttttgcttctatg 1936874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 10989552 - 10989661
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||| |||||||| ||||| | || ||||||||| |||||||||||||||| ||  ||||||||||||||||||||||| ||||| ||   ||||||    
T  10989552 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcac 10989651  T
Q  101 gaatttagca 110  Q
    ||||||||||    
T  10989652 gaatttagca 10989661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 13911133 - 13911024
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||| |||||||| ||||| | || ||||||||| |||||||||||||||||||  ||||||||||||||||||||||| ||||| |    ||||||    
T  13911133 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaattaacatcaattcatgcatacaaacataacatcacaacaagagcac 13911034  T
Q  101 gaatttagca 110  Q
    ||||||||||    
T  13911033 gaatttagca 13911024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 164 - 239
Target Start/End: Complemental strand, 111201 - 111126
Alignment:
Q  164 atgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatg 239  Q
    ||||||||||| || |||||||||||||||||||||||| |||||| ||||||| ||||||||||| |||||||||    
T  111201 atgattatgatgaaaactaacccccttaccttaattatcaccaacttttagctcaagcttcacttttgctcctatg 111126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 296087 - 295893
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||| ||||||||||||| || || ||| ||||| |||||||||||||  ||||| ||| ||||||||| ||||||||| || |  | || || |||    
T  296087 ataacttctcatttttacataattcaacatgaaatttcaccaacaatcataacattatcatcgattcatgcacacaaacataacacctcaattagaacac 295988  T
Q  101 gaatttagcaacaatcatccataat-caaaa-ttcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacct 194  Q
    ||||||||||||||| || ||| || ||||| |||||||||  |||||||||  | ||||||||||  |||||| | ||||| |||||||||||||    
T  295987 gaatttagcaacaattattcattatgcaaaatttcatacaaagtttgaaaatgca-aaaatgatgagaattatgttgaagacaaacccccttacct 295893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 2437600 - 2437710
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||| |||||||| ||||| | || ||||||||| |||||||||||||||| ||  ||||||||||||||||||||||| ||||| |    ||||||    
T  2437600 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcacaacaagagcac 2437699  T
Q  101 gaatttagcaa 111  Q
    |||||||||||    
T  2437700 gaatttagcaa 2437710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 7283987 - 7283913
Alignment:
Q  165 tgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatg 239  Q
    |||||||||| || |||||||||||||||||||||||| |||| ||||| ||| ||||||||||| |||||||||    
T  7283987 tgattatgatgaaaactaacccccttaccttaattatcaccaattattaactcaagcttcacttttgctcctatg 7283913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 237
Target Start/End: Original strand, 13377819 - 13377924
Alignment:
Q  130 attcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcacttt 229  Q
    |||||||||||| |||||||||||||  |  |  ||||||||||| ||  ||||||||||||||||||||||| |||| |  |||| | |||||||||||    
T  13377819 attcatacaacaattgaaaatttacactaaaa--atgattatgatgaattctaacccccttaccttaattatcaccaattcctagcccaagcttcacttt 13377916  T
Q  230 agctccta 237  Q
    ||||||||    
T  13377917 agctccta 13377924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 80 - 122
Target Start/End: Complemental strand, 14114031 - 14113989
Alignment:
Q  80 atatcatcaaagttggagcacgaatttagcaacaatcatccat 122  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  14114031 atatcatcaaagttggagcacgaatttagcaacaattatccat 14113989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 80 - 122
Target Start/End: Complemental strand, 14423681 - 14423639
Alignment:
Q  80 atatcatcaaagttggagcacgaatttagcaacaatcatccat 122  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  14423681 atatcatcaaagttggagcacgaatttagcaacaattatccat 14423639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 196
Target Start/End: Original strand, 36024372 - 36024485
Alignment:
Q  90 agttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatgataaagactaa 183  Q
    ||||||||||||||||||| |||||| |||||  ||   ||||||||||| ||||||||||| ||  |||    ||||||||||||||||| ||||||||    
T  36024372 agttggagcacgaatttagaaacaattatccaattatgaaaaattcataccacatttgaaaaattgtaaaaatgatgatgatgattatgatgaagactaa 36024471  T
Q  184 -cccccttacctta 196  Q
     |||||||||||||    
T  36024472 ccccccttacctta 36024485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 237
Target Start/End: Original strand, 13389693 - 13389750
Alignment:
Q  180 ctaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 237  Q
    ||||||||||||||||||||||| |||| |  |||| | |||||||||||||||||||    
T  13389693 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 13389750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 2029244 - 2029276
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    |||||||||||||||||||||||||||||||||    
T  2029244 atgattatgataaagactaacccccttacctta 2029276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 7293333 - 7293365
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    |||||||||||||||||||||||||||||||||    
T  7293333 atgattatgataaagactaacccccttacctta 7293365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 11516544 - 11516576
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    |||||||||||||||||||||||||||||||||    
T  11516544 atgattatgataaagactaacccccttacctta 11516576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 14113935 - 14113903
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    |||||||||||||||||||||||||||||||||    
T  14113935 atgattatgataaagactaacccccttacctta 14113903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 15441510 - 15441478
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    |||||||||||||||||||||||||||||||||    
T  15441510 atgattatgataaagactaacccccttacctta 15441478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 196
Target Start/End: Original strand, 15709428 - 15709501
Alignment:
Q  127 aaaattcatacaacatttgaaaatttacaaaat----gatgatgattatgataaagactaacccccttacctta 196  Q
    ||||||||||| ||||||||||| || ||||||    ||||||||||||||| |||||||| || |||||||||    
T  15709428 aaaattcataccacatttgaaaaattgcaaaattgatgatgatgattatgatgaagactaatcctcttacctta 15709501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 30262075 - 30262043
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    |||||||||||||||||||||||||||||||||    
T  30262075 atgattatgataaagactaacccccttacctta 30262043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 42056220 - 42056188
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    |||||||||||||||||||||||||||||||||    
T  42056220 atgattatgataaagactaacccccttacctta 42056188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 106
Target Start/End: Complemental strand, 16915002 - 16914928
Alignment:
Q  33 aatttaaccaacaatcatacaattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 106  Q
    ||||| ||||||||  || ||||||| ||||||| ||||||| |||||||||||||| | || ||||||||||||    
T  16915002 aatttcaccaacaacaattcaattatcatcaatttcatgcattcaaacatatcatcataattagagcacgaattt 16914928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 230
Target Start/End: Complemental strand, 17223846 - 17223796
Alignment:
Q  180 ctaacccccttaccttaattatctccaactattagctctagcttcacttta 230  Q
    ||||||||||||||||||||||| |||| | ||||| | ||||||||||||    
T  17223846 ctaacccccttaccttaattatcaccaattcttagcccaagcttcacttta 17223796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 115
Target Start/End: Complemental strand, 48622751 - 48622665
Alignment:
Q  29 atgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 115  Q
    ||||||||| ||| |||| ||||| || || ||||||||||||| |  || ||||||||| |||  |||||||||||||||| ||||    
T  48622751 atgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatatcatcacagtaagagcacgaatttagcatcaat 48622665  T

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Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 371417 - 371449
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    ||||||||||| |||||||||||||||||||||    
T  371417 atgattatgatgaagactaacccccttacctta 371449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 3049905 - 3049937
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    |||||||||||||| ||||||||||||||||||    
T  3049905 atgattatgataaaaactaacccccttacctta 3049937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 13321334 - 13321366
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    ||||||||||| |||||||||||||||||||||    
T  13321334 atgattatgatgaagactaacccccttacctta 13321366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 192
Target Start/End: Complemental strand, 15516793 - 15516765
Alignment:
Q  164 atgattatgataaagactaacccccttac 192  Q
    |||||||||||||||||||||||||||||    
T  15516793 atgattatgataaagactaacccccttac 15516765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 16919870 - 16919926
Alignment:
Q  181 taacccccttaccttaattatctccaactattagctctagcttcactttagctccta 237  Q
    ||||||||||| |||||||||| |||| |  |||| | |||||||||||||||||||    
T  16919870 taacccccttatcttaattatcaccaattcctagcccaagcttcactttagctccta 16919926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 25124450 - 25124482
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    ||||||||||| |||||||||||||||||||||    
T  25124450 atgattatgatgaagactaacccccttacctta 25124482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 47480976 - 47480944
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    ||||||||||| |||||||||||||||||||||    
T  47480976 atgattatgatgaagactaacccccttacctta 47480944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 155; Significance: 2e-82; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 3 - 196
Target Start/End: Original strand, 1268 - 1462
Alignment:
Q  3 aacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 102  Q
    ||||| |||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  1268 aacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattattatcaattcatgcatactaacatatcatcaaagttggagcacga 1367  T
Q  103 atttagcaacaatcatccataatcaaaattcatacaacatttgaaaattt-acaaaatgatgatgattatgataaagactaacccccttacctta 196  Q
    ||||||||||||| ||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  1368 atttagcaacaattatccataagaaaaattcatacaacatttgaaaatttcacaaaatgatgatgattatgataaagactaacccccttacctta 1462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 3 - 196
Target Start/End: Complemental strand, 3701 - 3508
Alignment:
Q  3 aacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 102  Q
    ||||| |||||||||||||||| || ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  3701 aacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacga 3602  T
Q  103 atttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 196  Q
    ||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  3601 atttagcaacaattatctataatcaaaattcatacaacttttgaaaatttacaaaatgaagatgattatgacaaagactaacccccttacctta 3508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 155; Significance: 2e-82; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 20 - 239
Target Start/End: Complemental strand, 16405077 - 16404857
Alignment:
Q  20 tatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatc 119  Q
    ||||| || ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||    
T  16405077 tatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaataattatc 16404978  T
Q  120 cataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaattatctccaactattagctc 217  Q
    ||| ||   |||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  16404977 catcatgcaaaaattcatacaacatttgaaaatttac-aaataatgatgattatgatgaagactaacccccttaccttaattatctccaactattagctc 16404879  T
Q  218 tagcttcactttagctcctatg 239  Q
    |||||||||||| |||||||||    
T  16404878 tagcttcacttttgctcctatg 16404857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 3 - 196
Target Start/End: Complemental strand, 16193835 - 16193643
Alignment:
Q  3 aacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 102  Q
    ||||| |||||||||||||||| || |||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  16193835 aacttatcatttttacatatttgaacatgtaatttccccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcatagttggagcacga 16193736  T
Q  103 atttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 196  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  16193735 atttagcaacaatcatccataagcaaaattcatacaatatttgaaaatttaccaaatgatgatgattatgataaagactaa-ccccttacctta 16193643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 3 - 196
Target Start/End: Complemental strand, 24928910 - 24928716
Alignment:
Q  3 aacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 102  Q
    ||||| |||||| | | ||||| || ||||||||| |||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  24928910 aacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatataatcacagttggagcacga 24928811  T
Q  103 atttagcaacaatcatccataatcaaaattcatacaacatttgaaaattt-acaaaatgatgatgattatgataaagactaacccccttacctta 196  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||    
T  24928810 atttagcaacaattatccataatcaaaattcatacaacatttgaaaatttcacaaaatgacgatgattatgataaagactaaccccattacctta 24928716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 3 - 196
Target Start/End: Complemental strand, 43373587 - 43373392
Alignment:
Q  3 aacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 102  Q
    ||||| |||||||||||||||| || ||||||||| ||||||||||||| |||||| |||||||||||||||||||| |||||||| |||||||||||||    
T  43373587 aacttatcatttttacatatttgaacatgtaatttcaccaacaatcatataattatcatcaattcatgcatacaaacgtatcatcacagttggagcacga 43373488  T
Q  103 atttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 196  Q
    ||||||||  ||| |||||| ||   |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  43373487 atttagcattaattatccattatacaaaaattcatacaacatttgaaatttcacaaaatgatgatgattatgataaagactaacccccttacctta 43373392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 5238229 - 5238350
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5238229 ataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 5238328  T
Q  101 gaatttagcaacaatcatccat 122  Q
    ||||||||||||||| ||||||    
T  5238329 gaatttagcaacaattatccat 5238350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 22907335 - 22907214
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22907335 ataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 22907236  T
Q  101 gaatttagcaacaatcatccat 122  Q
    ||||||||||||||| ||||||    
T  22907235 gaatttagcaacaattatccat 22907214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 24661369 - 24661248
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24661369 ataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 24661270  T
Q  101 gaatttagcaacaatcatccat 122  Q
    ||||||||||||||| ||||||    
T  24661269 gaatttagcaacaattatccat 24661248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 43685688 - 43685809
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43685688 ataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 43685787  T
Q  101 gaatttagcaacaatcatccat 122  Q
    ||||||||||||||| ||||||    
T  43685788 gaatttagcaacaattatccat 43685809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 164 - 239
Target Start/End: Original strand, 274766 - 274841
Alignment:
Q  164 atgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatg 239  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  274766 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 274841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 164 - 239
Target Start/End: Complemental strand, 641083 - 641008
Alignment:
Q  164 atgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatg 239  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  641083 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 641008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 164 - 239
Target Start/End: Complemental strand, 826889 - 826814
Alignment:
Q  164 atgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatg 239  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  826889 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 826814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 6774365 - 6774258
Alignment:
Q  3 aacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 102  Q
    ||||| |||||||||||||||| || ||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||| |||  ||||||||    
T  6774365 aacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagtaagagcacga 6774266  T
Q  103 atttagca 110  Q
    || |||||    
T  6774265 atctagca 6774258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 24549126 - 24549233
Alignment:
Q  3 aacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 102  Q
    ||||| |||||||||||||||| || ||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||| |||  ||||||||    
T  24549126 aacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagtaagagcacga 24549225  T
Q  103 atttagca 110  Q
    || |||||    
T  24549226 atctagca 24549233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 164 - 239
Target Start/End: Complemental strand, 24716794 - 24716719
Alignment:
Q  164 atgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatg 239  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  24716794 atgattatgataaagactaacccccttaccttaattatcaccaactattagctctagcttcacttttgctcctatg 24716719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 17345711 - 17345832
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    |||||||  |||||||||||| || || |||| |||| |||||||||||||||||||| ||||||||||||||| ||||||| ||||| |||| ||||||    
T  17345711 ataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatataaacataacatcacagttagagcac 17345810  T
Q  101 gaatttagcaacaatcatccat 122  Q
    |||||| |||||||| ||||||    
T  17345811 gaatttcgcaacaattatccat 17345832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 21844681 - 21844576
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||| || ||||||||||||||||||||||| ||||| ||   ||||||    
T  21844681 ataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcacagcaagagcac 21844582  T
Q  101 gaattt 106  Q
    ||||||    
T  21844581 gaattt 21844576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 21852074 - 21851969
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||| ||||||||||||||||||| || |||||| ||||||||||||||||| || ||||||||||||||||||||||| ||||| ||   ||||||    
T  21852074 ataacttatcatttttacatatttaaacatttaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcacagcaagagcac 21851975  T
Q  101 gaattt 106  Q
    ||||||    
T  21851974 gaattt 21851969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 30120865 - 30120974
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||| |||||||| ||||| | || ||||||||| |||||||||||||||| ||  || |||||||||||||||||||| ||||| ||   ||||||    
T  30120865 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacataaattcatgcatacaaacataacatcacagcaagagcac 30120964  T
Q  101 gaatttagca 110  Q
    ||||||||||    
T  30120965 gaatttagca 30120974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 164 - 239
Target Start/End: Original strand, 39115598 - 39115673
Alignment:
Q  164 atgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatg 239  Q
    ||||||||||| || |||||| ||||||||||||||||  |||||||||||||| ||||||||||| |||||||||    
T  39115598 atgattatgatgaaaactaacacccttaccttaattattaccaactattagctcaagcttcacttttgctcctatg 39115673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 16674501 - 16674392
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||| |||||||| ||||| | || ||||||||| |||||||||||||||| ||  || |||||||||||| ||||||| ||||| ||   ||||||    
T  16674501 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacataaattcatgcataaaaacataacatcacagaaagagcac 16674402  T
Q  101 gaatttagca 110  Q
    ||||||||||    
T  16674401 gaatttagca 16674392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 5238404 - 5238436
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    |||||||||||||||||||||||||||||||||    
T  5238404 atgattatgataaagactaacccccttacctta 5238436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 22907160 - 22907128
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    |||||||||||||||||||||||||||||||||    
T  22907160 atgattatgataaagactaacccccttacctta 22907128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 24385684 - 24385652
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    |||||||||||||||||||||||||||||||||    
T  24385684 atgattatgataaagactaacccccttacctta 24385652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 24661194 - 24661162
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    |||||||||||||||||||||||||||||||||    
T  24661194 atgattatgataaagactaacccccttacctta 24661162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 43685863 - 43685895
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    |||||||||||||||||||||||||||||||||    
T  43685863 atgattatgataaagactaacccccttacctta 43685895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 106
Target Start/End: Complemental strand, 23226131 - 23226076
Alignment:
Q  52 caattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 106  Q
    ||||||| ||||||| |||||||||||||||||||||| |||| |||||| |||||    
T  23226131 caattatcatcaatttcatgcatacaaacatatcatcatagttagagcacaaattt 23226076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 106
Target Start/End: Original strand, 26011663 - 26011741
Alignment:
Q  29 atgtaatttaaccaacaatcatacaattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 106  Q
    ||||||||| ||||||||  || ||||||| | ||||| ||||||| |||||||||||||| | || ||||||||||||    
T  26011663 atgtaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcatcataattagagcacgaattt 26011741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 237
Target Start/End: Original strand, 17285543 - 17285600
Alignment:
Q  180 ctaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 237  Q
    ||||||||||||||||||||||| |||| |  || | | |||||||||||||||||||    
T  17285543 ctaacccccttaccttaattatcaccaattcctaacccaagcttcactttagctccta 17285600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 237
Target Start/End: Complemental strand, 21198062 - 21198005
Alignment:
Q  180 ctaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 237  Q
    |||||||||||| |||||||||| |||| |  |||| | |||||||||||||||||||    
T  21198062 ctaacccccttatcttaattatcaccaattcctagcccaagcttcactttagctccta 21198005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 106
Target Start/End: Original strand, 23149985 - 23150026
Alignment:
Q  65 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 106  Q
    ||||||||| |||||||||||||| | |||||||||||||||    
T  23149985 ttcatgcattcaaacatatcatcataattggagcacgaattt 23150026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 2545265 - 2545297
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    ||||||||||| |||||||||||||||||||||    
T  2545265 atgattatgatgaagactaacccccttacctta 2545297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 3431208 - 3431176
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    ||||||||||| |||||||||||||||||||||    
T  3431208 atgattatgatgaagactaacccccttacctta 3431176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 22886654 - 22886686
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    ||||||||||| |||||||||||||||||||||    
T  22886654 atgattatgattaagactaacccccttacctta 22886686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 155; Significance: 2e-82; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 20 - 239
Target Start/End: Complemental strand, 54118346 - 54118125
Alignment:
Q  20 tatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatc 119  Q
    ||||| || ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||    
T  54118346 tatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacaattggagcacgaatttagcaacaattatc 54118247  T
Q  120 cataatc--aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaattatctccaactattagctc 217  Q
    ||| ||   ||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  54118246 cattatgcaaaaattcatacaacatttgaaaattcacaaaataatgatgattatgatgaagactaacccccttaccttaattatctccaactattagctc 54118147  T
Q  218 tagcttcactttagctcctatg 239  Q
    |||||||||||| |||| ||||    
T  54118146 tagcttcacttttgctcttatg 54118125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 3 - 196
Target Start/End: Original strand, 122033 - 122226
Alignment:
Q  3 aacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 102  Q
    ||||| |||||||||||||||| || ||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||| |    
T  122033 aacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacaa 122132  T
Q  103 atttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 196  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  122133 atttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaatccccttacctta 122226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 3 - 196
Target Start/End: Original strand, 13246574 - 13246769
Alignment:
Q  3 aacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 102  Q
    ||||| |||||| | | ||||| || ||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||| ||||| |||||||    
T  13246574 aacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcattaattcatgcatacaaacatatcatcacagttgtagcacga 13246673  T
Q  103 atttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 196  Q
    ||||| ||||||| |||||| ||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13246674 atttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 13246769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 26680342 - 26680463
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26680342 ataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 26680441  T
Q  101 gaatttagcaacaatcatccat 122  Q
    ||||||||||||||| ||||||    
T  26680442 gaatttagcaacaattatccat 26680463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 10 - 196
Target Start/End: Complemental strand, 15675201 - 15675009
Alignment:
Q  10 catttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagc 109  Q
    |||||||||||| || || ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  15675201 catttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagc 15675102  T
Q  110 aacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatgataaagactaacccccttacctta 196  Q
    |||||| |||||  ||   ||||||||||| ||||||||||| || ||||    ||||||||||||||||| |||||||||||||||||||||    
T  15675101 aacaattatccaattatgaaaaattcataccacatttgaaaaattgcaaaaatgatgatgatgattatgatgaagactaacccccttacctta 15675009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 10488704 - 10488825
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10488704 ataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 10488803  T
Q  101 gaatttagcaacaatcatccat 122  Q
    ||||||||||||||| ||||||    
T  10488804 gaatttagcaacaattatccat 10488825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 16328047 - 16327926
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16328047 ataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 16327948  T
Q  101 gaatttagcaacaatcatccat 122  Q
    ||||||||||||||| ||||||    
T  16327947 gaatttagcaacaattatccat 16327926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 10 - 196
Target Start/End: Complemental strand, 10104362 - 10104170
Alignment:
Q  10 catttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagc 109  Q
    |||||||||||| || || ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  10104362 catttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacggatttagc 10104263  T
Q  110 aacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatgataaagactaacccccttacctta 196  Q
    |||||| |||||  ||   ||||||||||| ||||||||||| ||  |||    ||||||||||||||||| |||||||||||||||||||||    
T  10104262 aacaattatccaattatgaaaaattcataccacatttgaaaaattgtaaaaatgatgatgatgattatgatgaagactaacccccttacctta 10104170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 49 - 196
Target Start/End: Original strand, 33240890 - 33241043
Alignment:
Q  49 atacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttga 146  Q
    ||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||  ||   ||||||||||| ||||||||    
T  33240890 atacaatcatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttga 33240989  T
Q  147 aaatttacaaa----atgatgatgattatgataaagactaacccccttacctta 196  Q
    ||| || ||||    ||||||||||||||||| |||||||||||||||||||||    
T  33240990 aaaattgcaaaaatgatgatgatgattatgatgaagactaacccccttacctta 33241043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 13048342 - 13048221
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||| || |||||||||||||||| ||||||||| ||||||||||||||||| || ||||| |||||||||||||||||||||  |||||||||||     
T  13048342 ataacttatcctttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaaatcatgcatacaaacatatcattgaagttggagcat 13048243  T
Q  101 gaatttagcaacaatcatccat 122  Q
    ||||||||||||||| ||||||    
T  13048242 gaatttagcaacaattatccat 13048221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 164 - 239
Target Start/End: Complemental strand, 25119139 - 25119064
Alignment:
Q  164 atgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatg 239  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  25119139 atgattatgataaaaactaactcccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 25119064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 10644362 - 10644467
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    |||||||  ||||||||||||||| || ||||||||| || ||||||||||||||||| ||||||||||||||||||||||| ||||| ||   ||||||    
T  10644362 ataacttaacatttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagcaagagcac 10644461  T
Q  101 gaattt 106  Q
    ||||||    
T  10644462 gaattt 10644467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 31115780 - 31115865
Alignment:
Q  10 catttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttgg 95  Q
    |||||||||||| |  || ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  31115780 catttttacataatggaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttgg 31115865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 164 - 239
Target Start/End: Complemental strand, 5682460 - 5682385
Alignment:
Q  164 atgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatg 239  Q
    |||||||||||||| |||||||| ||||||||||||||| ||||||||||||||  |||||||||| |||||||||    
T  5682460 atgattatgataaaaactaacccacttaccttaattatcaccaactattagctcatgcttcacttttgctcctatg 5682385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 90 - 196
Target Start/End: Original strand, 31132545 - 31132657
Alignment:
Q  90 agttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatgataaagactaa 183  Q
    |||||||||||||||||||||||||| |||||  ||   ||||||||||| ||||||||||| || ||||    |||||||| |||||||| ||||||||    
T  31132545 agttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgcaaaaatgatgatgataattatgatgaagactaa 31132644  T
Q  184 cccccttacctta 196  Q
    |||||||||||||    
T  31132645 cccccttacctta 31132657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 47357797 - 47357906
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||| |||||||| ||||| | || ||||||||| ||||||||| |||||| ||  |||||| |||||||||||||||| ||||| ||   ||||||    
T  47357797 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaatccatgcatacaaacataacatcacagcaagagcac 47357896  T
Q  101 gaatttagca 110  Q
    ||||||||||    
T  47357897 gaatttagca 47357906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 40885676 - 40885570
Alignment:
Q  1 ataacttttcatttttacata-tttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagca 99  Q
    |||||||  ||||| |||||| ||| || ||||||||| |||||||| ||| ||||||| | ||||||||||||||||||||| || || |||||||| |    
T  40885676 ataacttgacatttatacatactttgaacatgtaatttcaccaacaaacattcaattatcaccaattcatgcatacaaacatagcaccacagttggagta 40885577  T
Q  100 cgaattt 106  Q
    |||||||    
T  40885576 cgaattt 40885570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 237
Target Start/End: Complemental strand, 41165881 - 41165808
Alignment:
Q  164 atgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 237  Q
    ||||||||||| ||  ||||||||||||| ||||||||| |||| |  |||| | |||||||||||||||||||    
T  41165881 atgattatgatgaattctaacccccttacgttaattatcaccaattcctagcccaagcttcactttagctccta 41165808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 14952085 - 14952117
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    |||||||||||||||||||||||||||||||||    
T  14952085 atgattatgataaagactaacccccttacctta 14952117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 15135939 - 15135907
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    |||||||||||||||||||||||||||||||||    
T  15135939 atgattatgataaagactaacccccttacctta 15135907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 15272243 - 15272211
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    |||||||||||||||||||||||||||||||||    
T  15272243 atgattatgataaagactaacccccttacctta 15272211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 16327872 - 16327840
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    |||||||||||||||||||||||||||||||||    
T  16327872 atgattatgataaagactaacccccttacctta 16327840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 16609045 - 16609013
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    |||||||||||||||||||||||||||||||||    
T  16609045 atgattatgataaagactaacccccttacctta 16609013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 26680517 - 26680549
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    |||||||||||||||||||||||||||||||||    
T  26680517 atgattatgataaagactaacccccttacctta 26680549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 237
Target Start/End: Complemental strand, 47534990 - 47534933
Alignment:
Q  180 ctaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 237  Q
    ||||||||||||||||||||||| |||| |  | || | |||||||||||||||||||    
T  47534990 ctaacccccttaccttaattatcaccaattcctcgcccaagcttcactttagctccta 47534933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 8045272 - 8045304
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    ||||||||||| |||||||||||||||||||||    
T  8045272 atgattatgatgaagactaacccccttacctta 8045304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 105
Target Start/End: Complemental strand, 13809551 - 13809511
Alignment:
Q  65 ttcatgcatacaaacatatcatcaaagttggagcacgaatt 105  Q
    ||||||||| |||||||||||||| | ||||||||||||||    
T  13809551 ttcatgcattcaaacatatcatcataattggagcacgaatt 13809511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 16523146 - 16523178
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    ||||||||||| |||||||||||||||||||||    
T  16523146 atgattatgatgaagactaacccccttacctta 16523178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 154; Significance: 8e-82; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 3 - 196
Target Start/End: Original strand, 48742 - 48935
Alignment:
Q  3 aacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 102  Q
    ||||| |||||||| | ||||| || ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  48742 aacttatcattttttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacga 48841  T
Q  103 atttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 196  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48842 atttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 48935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 36236 - 36323
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatca 88  Q
    ||||||| |||||||| ||||| | || ||||||||| |||||||||||||||| ||  |||||||||| |||||||||||| |||||    
T  36236 ataacttatcatttttgcatatatgaatatgtaatttcaccaacaatcatacaactaacatcaattcatacatacaaacataacatca 36323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 61154 - 61122
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    ||||||||||| |||||||||||||||||||||    
T  61154 atgattatgatgaagactaacccccttacctta 61122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 9 - 196
Target Start/End: Original strand, 41879 - 42066
Alignment:
Q  9 tcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttag 108  Q
    |||||||||||||||| |  ||||||||| |||||||||   |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  41879 tcatttttacatatttgagcatgtaatttcaccaacaatatgacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttag 41978  T
Q  109 caacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 196  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  41979 caacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagaccaacccccttacctta 42066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 3 - 194
Target Start/End: Complemental strand, 51301 - 51110
Alignment:
Q  3 aacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 102  Q
    ||||| |||||||||| ||||| || ||||||||| |||||||||| ||||||||| ||||||||||||||||||| ||||||||| |||||||||||||    
T  51301 aacttatcatttttacctatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaatatatcatcacagttggagcacga 51202  T
Q  103 atttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacct 194  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  51201 atttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaatctccttacct 51110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 11 - 196
Target Start/End: Complemental strand, 6175 - 5990
Alignment:
Q  11 atttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 110  Q
    |||||||||||||| || ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  6175 atttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagca 6076  T
Q  111 acaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 196  Q
    ||||| ||||||||||| |||||||||||||||||| ||||| |||| |||  |||||||||||||||||||||||||||||||||    
T  6075 acaattatccataatcacaattcatacaacatttgagaatttgcaaagtgaaaatgattatgataaagactaacccccttacctta 5990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 11 - 196
Target Start/End: Complemental strand, 1067 - 882
Alignment:
Q  11 atttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 110  Q
    |||||||||||||| || ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  1067 atttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagca 968  T
Q  111 acaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 196  Q
    ||||| ||||||||||| |||||||||||||||||| |||||  ||| ||| ||||||||||||||||||||||||||||||||||    
T  967 acaattatccataatcacaattcatacaacatttgagaatttgtaaagtgaagatgattatgataaagactaacccccttacctta 882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 138; Significance: 3e-72; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 3 - 196
Target Start/End: Original strand, 23507109 - 23507302
Alignment:
Q  3 aacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 102  Q
    ||||| |||||||||||||||| || ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |  ||||||||||    
T  23507109 aacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacaaatggagcacga 23507208  T
Q  103 atttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 196  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||  ||||||||||  ||||||||||||||||||||||||||||||||||    
T  23507209 atttagcaacaattatccataagcaaaattcatacaacatttgaaatcttacaaaatggagatgattatgataaagactaacccccttacctta 23507302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 3 - 196
Target Start/End: Complemental strand, 27182666 - 27182471
Alignment:
Q  3 aacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 102  Q
    ||||| |||||| | | ||||| || ||||||||| | |||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||| ||    
T  27182666 aacttatcatttgttcctatttgaacatgtaatttcatcaacaatcatacaattatcatcagttcatgcatacaaacatatcatcacagttggagcatga 27182567  T
Q  103 atttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 196  Q
    ||||||||||||| |||||| ||   |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  27182566 atttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgatgaagactaacccccttacctta 27182471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 10 - 196
Target Start/End: Complemental strand, 18531179 - 18530988
Alignment:
Q  10 catttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagc 109  Q
    |||||||||||| || || ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18531179 catttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagc 18531080  T
Q  110 aacaatcatcc-ataatcaaa-attcatacaacatttgaaaatttacaaaatgatgat---gattatgataaagactaacccccttacctta 196  Q
    |||||| |||| || || ||| |||||||| ||||||||||| || ||||||||||||   ||||||||| |||||||||||||||||||||    
T  18531079 aacaattatccaattatgaaacattcataccacatttgaaaaattgcaaaatgatgatgacgattatgatgaagactaacccccttacctta 18530988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 20623111 - 20623232
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20623111 ataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 20623210  T
Q  101 gaatttagcaacaatcatccat 122  Q
    ||||||||||||||| ||||||    
T  20623211 gaatttagcaacaattatccat 20623232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 21233649 - 21233528
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21233649 ataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 21233550  T
Q  101 gaatttagcaacaatcatccat 122  Q
    ||||||||||||||| ||||||    
T  21233549 gaatttagcaacaattatccat 21233528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 16536339 - 16536460
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  16536339 ataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattataaattcatgcatacaaacatatcatcaaagttggagcac 16536438  T
Q  101 gaatttagcaacaatcatccat 122  Q
    ||||||||||||||| ||||||    
T  16536439 gaatttagcaacaattatccat 16536460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 37052886 - 37053007
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||||||||||  ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37052886 ataacttttcatttccacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 37052985  T
Q  101 gaatttagcaacaatcatccat 122  Q
    ||||||||||||||| ||||||    
T  37052986 gaatttagcaacaattatccat 37053007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 10 - 196
Target Start/End: Complemental strand, 22053945 - 22053753
Alignment:
Q  10 catttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagc 109  Q
    |||||||||||| || || ||||||||| |||||||||||||||| ||| |||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  22053945 catttttacataattgaacatgtaatttcaccaacaatcatacaactatcatcaattcatacatacaaacatatcatcacagttggagcacgaatttagc 22053846  T
Q  110 aacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatgataaagactaacccccttacctta 196  Q
    |||||| |||||  ||   ||||||||||| ||||||||||| || ||||    ||||||||||||||||| |||||||||||||||||||||    
T  22053845 aacaattatccaattatgaaaaattcataccacatttgaaaaatttcaaaaatgatgatgatgattatgatgaagactaacccccttacctta 22053753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 25900527 - 25900408
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||||||||||| ||||||| ||| || ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  25900527 ataacttttcattttcacatattcaaacatataatttaaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcaaagttggagcac 25900428  T
Q  101 gaatttagcaacaatcatcc 120  Q
    ||||||||||||||| ||||    
T  25900427 gaatttagcaacaattatcc 25900408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 34939419 - 34939540
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    |||||||  |||||||||||| || || |||| |||| |||||||||||||||||||| ||||||||||||||||||||||| ||||| |||| ||||||    
T  34939419 ataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagttagagcac 34939518  T
Q  101 gaatttagcaacaatcatccat 122  Q
    ||||||||||||| | ||||||    
T  34939519 gaatttagcaacagttatccat 34939540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 29188391 - 29188284
Alignment:
Q  3 aacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 102  Q
    ||||| |||||||||||||||| || ||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||| |||  ||||||||    
T  29188391 aacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagtaagagcacga 29188292  T
Q  103 atttagca 110  Q
    || |||||    
T  29188291 atctagca 29188284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 27009984 - 27010089
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||| ||||||||||||||||||| ||||||||| ||||||| ||||||||| || ||||||||||||||||||||||| ||||| ||   ||||||    
T  27009984 ataacttatcatttttacatatttaaacatgtaatttcaccaacactcatacaatcatcatcaattcatgcatacaaacataacatcacagcaagagcac 27010083  T
Q  101 gaattt 106  Q
    ||||||    
T  27010084 gaattt 27010089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 43443504 - 43443398
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||| |||||||| ||||| | || ||||||||| |||||||||||||||| ||  ||||||||||||||||||||||| ||||| ||   ||||||    
T  43443504 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcac 43443405  T
Q  101 gaattta 107  Q
    |||||||    
T  43443404 gaattta 43443398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 4200094 - 4199985
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||| |||||||| ||||| | || ||||||||| |||||||||||||||| ||  ||||||||||||||||||||||| ||||| |    ||||||    
T  4200094 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcacaacaagagcac 4199995  T
Q  101 gaatttagca 110  Q
    ||||||||||    
T  4199994 gaatttagca 4199985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 19500042 - 19500151
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||| |||||||| ||||| | || ||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| ||||| ||   ||||||    
T  19500042 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcac 19500141  T
Q  101 gaatttagca 110  Q
    ||||||||||    
T  19500142 gaatttagca 19500151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 22366590 - 22366481
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||| |||||||| ||||| | || ||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| ||||| ||   ||||||    
T  22366590 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcac 22366491  T
Q  101 gaatttagca 110  Q
    ||||||||||    
T  22366490 gaatttagca 22366481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 25426771 - 25426880
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||| |||||||| ||||| | || ||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| ||||| ||   ||||||    
T  25426771 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcac 25426870  T
Q  101 gaatttagca 110  Q
    ||||||||||    
T  25426871 gaatttagca 25426880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 11584374 - 11584448
Alignment:
Q  165 tgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatg 239  Q
    |||||||||| ||  ||||||||||||||||||||||| |||||||||| ||| ||||||||||| |||||||||    
T  11584374 tgattatgatgaattctaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatg 11584448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 18778101 - 18777995
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||| |||||||| ||||| | || ||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| ||||| ||   ||||||    
T  18778101 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcac 18778002  T
Q  101 gaattta 107  Q
    |||||||    
T  18778001 gaattta 18777995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 12517 - 12626
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||| ||| |||| ||||| | || ||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| ||||| ||   ||||||    
T  12517 ataacttatcacttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcac 12616  T
Q  101 gaatttagca 110  Q
    ||||||||||    
T  12617 gaatttagca 12626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 21073704 - 21073595
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||| |||||||| ||||| | || ||||||||| ||||||||| |||||| ||  ||| ||||||||||||||||||| ||||| ||   ||||||    
T  21073704 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatccattcatgcatacaaacataacatcacagcaagagcac 21073605  T
Q  101 gaatttagca 110  Q
    ||||||||||    
T  21073604 gaatttagca 21073595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 115
Target Start/End: Original strand, 32950865 - 32950951
Alignment:
Q  29 atgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 115  Q
    ||||||||| | | |||||||||||||||| ||||| |||| || || || ||| ||||| |||| ||||||||||||| |||||||    
T  32950865 atgtaatttcaaccacaatcatacaattatcatcaaatcatacacacgaaaataacatcacagttagagcacgaatttaacaacaat 32950951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 16105967 - 16105999
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    |||||||||||||||||||||||||||||||||    
T  16105967 atgattatgataaagactaacccccttacctta 16105999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 20623286 - 20623318
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    |||||||||||||||||||||||||||||||||    
T  20623286 atgattatgataaagactaacccccttacctta 20623318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 21233474 - 21233442
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    |||||||||||||||||||||||||||||||||    
T  21233474 atgattatgataaagactaacccccttacctta 21233442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 25900352 - 25900320
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    |||||||||||||||||||||||||||||||||    
T  25900352 atgattatgataaagactaacccccttacctta 25900320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 37053061 - 37053093
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    |||||||||||||||||||||||||||||||||    
T  37053061 atgattatgataaagactaacccccttacctta 37053093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 106
Target Start/End: Complemental strand, 21310783 - 21310709
Alignment:
Q  33 aatttaaccaacaatcatacaattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 106  Q
    ||||| ||||||||  || ||||||| | ||||| ||||||| |||||||||||||| |||| ||||||||||||    
T  21310783 aatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcatcatagttagagcacgaattt 21310709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 106
Target Start/End: Original strand, 29918138 - 29918212
Alignment:
Q  33 aatttaaccaacaatcatacaattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 106  Q
    ||||| ||||||||  || ||||||| ||||||| |||| || |||||||||||||| | |||||||||||||||    
T  29918138 aatttcaccaacaacaattcaattatcatcaatttcatgtattcaaacatatcatcataattggagcacgaattt 29918212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 237
Target Start/End: Complemental strand, 5450768 - 5450695
Alignment:
Q  164 atgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 237  Q
    ||||||||||| ||  ||||||||||||||||||||||   ||| |  |||| | |||||||||||||||||||    
T  5450768 atgattatgatgaattctaacccccttaccttaattattatcaattcctagcccaagcttcactttagctccta 5450695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 237
Target Start/End: Original strand, 19862547 - 19862604
Alignment:
Q  180 ctaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 237  Q
    ||||||||||||||||||||||| |||| | |||||   | |||||||||||||||||    
T  19862547 ctaacccccttaccttaattatcaccaatttttagcctaaacttcactttagctccta 19862604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 237
Target Start/End: Complemental strand, 21222519 - 21222462
Alignment:
Q  180 ctaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 237  Q
    ||||||||| ||||||||||||| |||| |  |||| | |||||||||||||||||||    
T  21222519 ctaacccccataccttaattatcaccaattcctagcccaagcttcactttagctccta 21222462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 106
Target Start/End: Complemental strand, 23981557 - 23981516
Alignment:
Q  65 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 106  Q
    |||||||||||||||||||||||| | || ||||||||||||    
T  23981557 ttcatgcatacaaacatatcatcataattagagcacgaattt 23981516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 108760 - 108728
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    ||||||||||| |||||||||||||||||||||    
T  108760 atgattatgatgaagactaacccccttacctta 108728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 9730310 - 9730278
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    ||||||||||| |||||||||||||||||||||    
T  9730310 atgattatgatgaagactaacccccttacctta 9730278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 16536514 - 16536546
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    |||||||||||||||||||||||||||| ||||    
T  16536514 atgattatgataaagactaacccccttatctta 16536546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 134; Significance: 7e-70; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 3 - 196
Target Start/End: Original strand, 172049 - 172242
Alignment:
Q  3 aacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 102  Q
    ||||| |||||| | | ||||| || ||||||||| |||| ||||||||||||||| |||||||||| |||||||||||||||||| ||||||||||||     
T  172049 aacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcatccatacaaacatatcatcacagttggagcacgt 172148  T
Q  103 atttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 196  Q
    ||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  172149 atttagcaacagttatccataatcaaaatttatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 172242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 3 - 196
Target Start/End: Original strand, 177752 - 177945
Alignment:
Q  3 aacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 102  Q
    ||||| |||||| | | ||||| || ||||||||| |||| ||||||||||||||| |||||||||| |||||||||||||||||| ||||||||||||     
T  177752 aacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcatccatacaaacatatcatcacagttggagcacgt 177851  T
Q  103 atttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 196  Q
    ||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  177852 atttagcaacagttatccataatcaaaatttatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 177945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 131; Significance: 5e-68; HSPs: 3)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 3 - 196
Target Start/End: Complemental strand, 26534 - 26340
Alignment:
Q  3 aacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 102  Q
    ||||| |||||||||||||||| || ||||| ||| ||||| |||| ||||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  26534 aacttatcatttttacatatttgaacatgtactttcaccaataatcttacaattatcatcaattcacgcatacaaacatatcatcaaagttggagcacga 26435  T
Q  103 atttagcaacaatcatccataat-caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 196  Q
    ||||||||||||| || ||| ||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  26434 atttagcaacaattatacattatgaaaaattcatacaacatttgaaaatttacaaaatgatcatgattatgataaagactaacccccttacctta 26340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 10 - 122
Target Start/End: Complemental strand, 8292 - 8180
Alignment:
Q  10 catttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagc 109  Q
    |||||||||||| || ||  |||||||| |||||||||||||||||||| | ||||||||||||||||||||| ||||| |||| |||||||||||||||    
T  8292 catttttacataattgaacctgtaatttcaccaacaatcatacaattatcaccaattcatgcatacaaacataacatcacagttagagcacgaatttagc 8193  T
Q  110 aacaatcatccat 122  Q
    |||||| ||||||    
T  8192 aacaattatccat 8180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 237
Target Start/End: Complemental strand, 6934 - 6877
Alignment:
Q  180 ctaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 237  Q
    ||||||||||||||||||||||| |||| |  |||| | |||||||||||| ||||||    
T  6934 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttaactccta 6877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 131; Significance: 5e-68; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 14 - 196
Target Start/End: Complemental strand, 128277 - 128095
Alignment:
Q  14 tttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaaca 113  Q
    |||||| |||| || ||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  128277 tttacacatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttgaagcacgaatttagcaaca 128178  T
Q  114 atcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 196  Q
    || |||||||| ||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  128177 attatccataagcaaaattcatacaacttttgaaaatttgcaaaatgaagatgattatgataaagactaacccccttacctta 128095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 31784 - 31697
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatca 88  Q
    ||||||| |||||||| ||||| | || ||||||||| |||||||||||||||| ||  |||||||||||||| |||||||| |||||    
T  31784 ataacttatcatttttgcatatatgaatatgtaatttcaccaacaatcatacaactaacatcaattcatgcattcaaacataacatca 31697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 130; Significance: 2e-67; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 3 - 197
Target Start/End: Complemental strand, 37032 - 36836
Alignment:
Q  3 aacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 102  Q
    ||||| |||||||||||||||| || ||||||||| |||||||| | ||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  37032 aacttatcatttttacatatttgaacatgtaatttcaccaacaagcttacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacga 36933  T
Q  103 atttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaa 197  Q
    ||||| ||||||| |||||| ||   |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  36932 atttaacaacaattatccattatgcaaaaattcatacaacatttgaaatttcacaaaatgatgatgattatgataaagactaacccccttaccttaa 36836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 15398 - 15324
Alignment:
Q  165 tgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatg 239  Q
    |||||||||| ||  |||||||||||||||||||||||||||||||||||| | ||||||||||| |||||||||    
T  15398 tgattatgatgaatgctaacccccttaccttaattatctccaactattagcccaagcttcacttttgctcctatg 15324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 129; Significance: 7e-67; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 3 - 196
Target Start/End: Original strand, 23153591 - 23153786
Alignment:
Q  3 aacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 102  Q
    ||||| |||||| | | ||||| || ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  23153591 aacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacga 23153690  T
Q  103 atttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 196  Q
    |||||| |||||| |||||| ||   |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  23153691 atttagaaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgatgaagactaacccccttacctta 23153786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 14626239 - 14626045
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||| |||||||||||||||| || ||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||| ||   ||||||    
T  14626239 ataacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagcaagagcac 14626140  T
Q  101 gaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctt 195  Q
    ||||||||||| ||| ||||||||||| |||||| ||||||||||| |||||  ||| ||| ||||||| ||||||  |||||||||||||||||    
T  14626139 gaatttagcaataattatccataatcacaattcaaacaacatttgagaatttgtaaagtgaagatgattgtgataataactaacccccttacctt 14626045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 10 - 122
Target Start/End: Complemental strand, 35009551 - 35009439
Alignment:
Q  10 catttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagc 109  Q
    |||||||||||| || || ||||||||| |||||||||||||||||||| |||||||||||||||||||| || ||||| |||| |||||||||||||||    
T  35009551 catttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacttaacatcacagttagagcacgaatttagc 35009452  T
Q  110 aacaatcatccat 122  Q
    |||||| ||||||    
T  35009451 aacaattatccat 35009439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 1657869 - 1657748
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    |||||||  |||||||||||| || || |||| |||| |||||||||||||||||||| |||||||||||||| |||||||| ||||| |||| ||||||    
T  1657869 ataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatccaaacataacatcacagttagagcac 1657770  T
Q  101 gaatttagcaacaatcatccat 122  Q
    ||||||||||||||| ||||||    
T  1657769 gaatttagcaacaattatccat 1657748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 164 - 239
Target Start/End: Complemental strand, 19983224 - 19983149
Alignment:
Q  164 atgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatg 239  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  19983224 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 19983149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 164 - 239
Target Start/End: Complemental strand, 35015089 - 35015014
Alignment:
Q  164 atgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatg 239  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  35015089 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 35015014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 15862613 - 15862734
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    |||||||  ||||| |||||| || || |||| |||| |||||||||||||||||||| ||||||||||||||||||||||| ||||| |||| ||||||    
T  15862613 ataacttcacatttatacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagttagagcac 15862712  T
Q  101 gaatttagcaacaatcatccat 122  Q
    |||||||| |||||| ||||||    
T  15862713 gaatttagtaacaattatccat 15862734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 127 - 196
Target Start/End: Original strand, 23148266 - 23148335
Alignment:
Q  127 aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 196  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  23148266 aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgatgaagactaacccccttacctta 23148335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 197
Target Start/End: Complemental strand, 1650212 - 1650020
Alignment:
Q  3 aacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 102  Q
    ||||| ||||| |||||||||| || ||||||||| |||||||||||||||||||| |||||||||||||||||||| || ||||| |||  ||||||||    
T  1650212 aacttatcattcttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacgtaacatcacagtaagagcacga 1650113  T
Q  103 atttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaa 197  Q
    || |||||  |||  | ||| || | |  ||||||||||||  |||||  | |||||| |  ||||||||||||||||||||||||||||||||||    
T  1650112 atctagcatgaattgttcatcaacccattttcatacaacatgagaaaa--tgcaaaatta-catgattatgataaagactaacccccttaccttaa 1650020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 164 - 239
Target Start/End: Original strand, 18583640 - 18583715
Alignment:
Q  164 atgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatg 239  Q
    ||||||||||| || |||||||||||||||||||||||| |||||||||| ||| ||||||||||| |||||||||    
T  18583640 atgattatgatgaaaactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatg 18583715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 39 - 122
Target Start/End: Original strand, 27751605 - 27751688
Alignment:
Q  39 accaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 122  Q
    |||||||||||||||||| | ||||||||||||||||||||||| ||||| | || ||||||||||||||| ||| | ||||||    
T  27751605 accaacaatcatacaattgtcatcaattcatgcatacaaacataacatcacaattagagcacgaatttagctacatttatccat 27751688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 25175706 - 25175815
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||| |||||||| ||||| | || ||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| || || ||   ||||||    
T  25175706 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacacagcaagagcac 25175805  T
Q  101 gaatttagca 110  Q
    ||||||||||    
T  25175806 gaatttagca 25175815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 27654092 - 27653983
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||| |||||||| ||||| | || ||||||||| ||||||||| |||||| ||  |||||||||||||||||| |||| ||||| ||   ||||||    
T  27654092 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaagcataacatcacagcaagagcac 27653993  T
Q  101 gaatttagca 110  Q
    ||||||||||    
T  27653992 gaatttagca 27653983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 29666044 - 29666137
Alignment:
Q  29 atgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 122  Q
    ||||||||| ||| |||||||||||||||| |||||||||| ||||  || ||| ||||| || | ||||||||||||| ||||||| ||||||    
T  29666044 atgtaatttcacccacaatcatacaattatcatcaattcatacataagaaaataacatcacagctagagcacgaatttaacaacaattatccat 29666137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 16825863 - 16825752
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatca--tacaattattatcaattcatgcatacaaacatatcatcaaagttggagc 98  Q
    ||||||| |||||||| ||||| | || ||||||||| ||||||||| |  ||||| ||  ||||||||||||||||||||||| ||||| ||   ||||    
T  16825863 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattaattacaactaacatcaattcatgcatacaaacataacatcacagcaagagc 16825764  T
Q  99 acgaatttagca 110  Q
    ||||||||||||    
T  16825763 acgaatttagca 16825752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 237
Target Start/End: Original strand, 21623506 - 21623563
Alignment:
Q  180 ctaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 237  Q
    ||||||||||||||||||||||| |||| |  |||| | |||||||||||||||||||    
T  21623506 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 21623563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 18002427 - 18002395
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    |||||||||||||||||||||||||||||||||    
T  18002427 atgattatgataaagactaacccccttacctta 18002395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 23995247 - 23995279
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    |||||||||||||||||||||||||||||||||    
T  23995247 atgattatgataaagactaacccccttacctta 23995279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 26090059 - 26090091
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    |||||||||||||||||||||||||||||||||    
T  26090059 atgattatgataaagactaacccccttacctta 26090091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 195
Target Start/End: Original strand, 4991396 - 4991427
Alignment:
Q  164 atgattatgataaagactaacccccttacctt 195  Q
    ||||||||||||||||||||||||||||||||    
T  4991396 atgattatgataaagactaacccccttacctt 4991427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 106
Target Start/End: Complemental strand, 16887847 - 16887792
Alignment:
Q  52 caattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 106  Q
    ||||||| ||||||| ||||||||||||||||| |||| |||| ||||||||||||    
T  16887847 caattatcatcaatttcatgcatacaaacatattatcatagttagagcacgaattt 16887792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 104
Target Start/End: Complemental strand, 17083271 - 17083200
Alignment:
Q  33 aatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaat 104  Q
    ||||| ||||||||  || ||||||| | |||||||||||| |||||||||||||| | || ||||||||||    
T  17083271 aatttcaccaacaacaattcaattatcaccaattcatgcattcaaacatatcatcataattagagcacgaat 17083200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 106
Target Start/End: Complemental strand, 35136068 - 35136013
Alignment:
Q  52 caattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 106  Q
    ||||||| ||||||| |||||||||||||||||||||  |||| ||||||||||||    
T  35136068 caattatcatcaatttcatgcatacaaacatatcatcctagttagagcacgaattt 35136013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 196
Target Start/End: Complemental strand, 15742150 - 15742120
Alignment:
Q  166 gattatgataaagactaacccccttacctta 196  Q
    |||||||||||||||||||||||||||||||    
T  15742150 gattatgataaagactaacccccttacctta 15742120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 106
Target Start/End: Complemental strand, 18629682 - 18629608
Alignment:
Q  33 aatttaaccaacaatcatacaattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 106  Q
    ||||| ||||||||  || ||||||| ||||||| ||||||| |||||||||||||| | || ||||||||||||    
T  18629682 aatttcaccaacaacaattcaattatcatcaatttcatgcattcaaacatatcatcataattagagcacgaattt 18629608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 237
Target Start/End: Complemental strand, 22361676 - 22361619
Alignment:
Q  180 ctaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 237  Q
    ||||||||||||||||||||||| |||| |  |||  | |||||||||||||||||||    
T  22361676 ctaacccccttaccttaattatcaccaattcctaggccaagcttcactttagctccta 22361619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 106
Target Start/End: Original strand, 29605619 - 29605696
Alignment:
Q  29 atgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattt 106  Q
    ||||||||| ||||||||  || ||||||| |  ||||||||||| ||||||||||| || | || ||||||||||||    
T  29605619 atgtaatttcaccaacaacaattcaattatcactaattcatgcattcaaacatatcaccataattagagcacgaattt 29605696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 106
Target Start/End: Original strand, 33324898 - 33324939
Alignment:
Q  65 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 106  Q
    |||||||||||||||||||||||  |||| ||||||||||||    
T  33324898 ttcatgcatacaaacatatcatcctagttagagcacgaattt 33324939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 1657693 - 1657661
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    ||||||||||| |||||||||||||||||||||    
T  1657693 atgattatgatgaagactaacccccttacctta 1657661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 237
Target Start/End: Original strand, 14152632 - 14152704
Alignment:
Q  165 tgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 237  Q
    |||||||||| |||| |||||||||| ||||||||| | | || |  |||| | |||||||||||||||||||    
T  14152632 tgattatgatgaagaataacccccttgccttaattagcacaaattcctagcccaagcttcactttagctccta 14152704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 15862789 - 15862821
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    ||||||||||| |||||||||||||||||||||    
T  15862789 atgattatgatgaagactaacccccttacctta 15862821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 18823315 - 18823283
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    ||||||||||| |||||||||||||||||||||    
T  18823315 atgattatgatgaagactaacccccttacctta 18823283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 18839170 - 18839138
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    ||||||||||| |||||||||||||||||||||    
T  18839170 atgattatgatgaagactaacccccttacctta 18839138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 27751742 - 27751774
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    ||||||||||| |||||||||||||||||||||    
T  27751742 atgattatgatgaagactaacccccttacctta 27751774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 32276691 - 32276659
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    ||||||||||| |||||||||||||||||||||    
T  32276691 atgattatgatgaagactaacccccttacctta 32276659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 3 - 196
Target Start/End: Original strand, 12257 - 12450
Alignment:
Q  3 aacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 102  Q
    ||||| ||||||||||| ||||||| ||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||    
T  12257 aacttatcatttttacacatttaaacatgtattttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttagagcacga 12356  T
Q  103 atttagcaacaatcatccataatcaaaa-ttcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 196  Q
    ||||||||||||| |||||||||||||| |||||||| |||||| ||| ||||||||| | ||||||||||||||||||||||||||||||||||    
T  12357 atttagcaacaattatccataatcaaaatttcatacagcatttg-aaagttacaaaattaagatgattatgataaagactaacccccttacctta 12450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 127; Significance: 1e-65; HSPs: 2)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 3 - 193
Target Start/End: Original strand, 19350 - 19543
Alignment:
Q  3 aacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 102  Q
    ||||| |||||||||||||||| || ||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  19350 aacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacga 19449  T
Q  103 atttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttac-aaaatgatgatgattatgataaagactaacccccttacc 193  Q
    ||||||||||||| |||||| ||   |||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||    
T  19450 atttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaaattatgatgattatgatgaagactaacccccttacc 19543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 3 - 122
Target Start/End: Original strand, 21434 - 21553
Alignment:
Q  3 aacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 102  Q
    ||||| |||||||||||||||| || ||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  21434 aacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacga 21533  T
Q  103 atttagcaacaatcatccat 122  Q
    ||||||||||||| ||||||    
T  21534 atttagcaacaattatccat 21553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 121; Significance: 4e-62; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 3 - 196
Target Start/End: Complemental strand, 247561 - 247366
Alignment:
Q  3 aacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 102  Q
    ||||| |||||| | | ||||| || ||| ||||| |||  ||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||    
T  247561 aacttatcatttgttcctatttgaacatgaaatttcaccctcaatcatacaattatcatcaattcatgcatacaaacatatcattacagttggagcacga 247462  T
Q  103 atttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 196  Q
    ||||||||||||| |||||| ||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  247461 atttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 247366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 34107 - 34075
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    ||||||||||| |||||||||||||||||||||    
T  34107 atgattatgatgaagactaacccccttacctta 34075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 120; Significance: 2e-61; HSPs: 4)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 20 - 196
Target Start/End: Complemental strand, 89556 - 89378
Alignment:
Q  20 tatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatc 119  Q
    ||||| || ||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||    
T  89556 tatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaatatatcatcacagttggagcacgaatttagcaacaattatc 89457  T
Q  120 cataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 196  Q
    ||| ||   |||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  89456 cattatgcaaaaattcatagaacatttgaaaatttacaaaatgatgatgatcatgatgaagactaacccccttacctta 89378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 71 - 196
Target Start/End: Complemental strand, 107835 - 107708
Alignment:
Q  71 catacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaaatgatgatgat 168  Q
    |||||||| ||||||||| |||||||||||||||||||||| ||| |||||| ||   ||||||||||||||||||||||||||||||||||||||||||    
T  107835 catacaaatatatcatcacagttggagcacgaatttagcaaaaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 107736  T
Q  169 tatgataaagactaacccccttacctta 196  Q
     ||||| |||||||||||||||||||||    
T  107735 catgatgaagactaacccccttacctta 107708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 106
Target Start/End: Original strand, 79731 - 79786
Alignment:
Q  52 caattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 106  Q
    ||||||| ||||||| |||||||||||||||||||||| |||| | ||||||||||    
T  79731 caattatcatcaatttcatgcatacaaacatatcatcatagttagtgcacgaattt 79786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 195
Target Start/End: Original strand, 130880 - 130911
Alignment:
Q  164 atgattatgataaagactaacccccttacctt 195  Q
    ||||||||||||||||||||||||||||||||    
T  130880 atgattatgataaagactaacccccttacctt 130911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 3 - 186
Target Start/End: Complemental strand, 5180 - 4996
Alignment:
Q  3 aacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 102  Q
    ||||| |||||||||||||||| || ||||| ||| |||||||||| ||||||||| ||||||||| ||||||||||||||| ||| |||||||| ||||    
T  5180 aacttatcatttttacatatttgaacatgtactttcaccaacaatcttacaattatcatcaattcacgcatacaaacatatcgtcacagttggagtacga 5081  T
Q  103 atttagcaacaatcatccataat-caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccc 186  Q
    ||||||||||||| |||||| ||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  5080 atttagcaacaattatccattatgaaaaattcatacaacatttgaaaatttacaaaatgataatgattatgataaagactaaccc 4996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 10 - 196
Target Start/End: Original strand, 9029 - 9215
Alignment:
Q  10 catttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagc 109  Q
    |||||||||||| || || ||||||||| |||||||||| ||||||||| ||| ||||||||||||||||||| ||||| |  |||||||||||||||||    
T  9029 catttttacataattgaacatgtaatttcaccaacaatcttacaattatcatcgattcatgcatacaaacataacatcacaaatggagcacgaatttagc 9128  T
Q  110 aacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 196  Q
    ||||||  ||||||| |||||||| |||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  9129 aacaattttccataagcaaaattcgtacaacttttgaaaatttgcaaaatgaagatgattatgataaagactaacccccttacctta 9215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 114; Significance: 6e-58; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 3 - 196
Target Start/End: Original strand, 272169 - 272362
Alignment:
Q  3 aacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 102  Q
    ||||| |||||| | | ||||| || |||||||||  ||| ||||||||||||||| |||||||||| |||||||||||||||| | |||||||| |||     
T  272169 aacttatcatttgttcctatttgaacatgtaatttctccatcaatcatacaattatcatcaattcattcatacaaacatatcattacagttggagtacgt 272268  T
Q  103 atttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 196  Q
    ||||||||| | | |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  272269 atttagcaatatttatccataatcaaaatttatacaatatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 272362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 3 - 196
Target Start/End: Complemental strand, 123283 - 123087
Alignment:
Q  3 aacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 102  Q
    ||||| |||||| | | ||||| || ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||    
T  123283 aacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacaattggagcacga 123184  T
Q  103 atttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttac-aaaatgatgatgattatgataaagactaacccccttacctta 196  Q
    ||||||||||||| |||||| ||   ||||||||||||||||||| |||||||| ||||| |||||||||||| | |||||||||||||||||||||    
T  123183 atttagcaacaattatccattatgcaaaaattcatacaacatttgcaaatttacaaaaattatgatgattatggtgaagactaacccccttacctta 123087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 106; Significance: 4e-53; HSPs: 4)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 26937 - 27058
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26937 ataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 27036  T
Q  101 gaatttagcaacaatcatccat 122  Q
    ||||||||||||||| ||||||    
T  27037 gaatttagcaacaattatccat 27058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 22682 - 22796
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22682 ataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 22781  T
Q  101 gaatttagcaacaat 115  Q
    |||||||||||||||    
T  22782 gaatttagcaacaat 22796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 22857 - 22889
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    |||||||||||||||||||||||||||||||||    
T  22857 atgattatgataaagactaacccccttacctta 22889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 27112 - 27144
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    |||||||||||||||||||||||||||||||||    
T  27112 atgattatgataaagactaacccccttacctta 27144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 106; Significance: 4e-53; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 1703 - 1582
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1703 ataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 1604  T
Q  101 gaatttagcaacaatcatccat 122  Q
    ||||||||||||||| ||||||    
T  1603 gaatttagcaacaattatccat 1582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 1528 - 1496
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    |||||||||||||||||||||||||||||||||    
T  1528 atgattatgataaagactaacccccttacctta 1496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 106; Significance: 4e-53; HSPs: 3)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 37187 - 37066
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37187 ataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 37088  T
Q  101 gaatttagcaacaatcatccat 122  Q
    ||||||||||||||| ||||||    
T  37087 gaatttagcaacaattatccat 37066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 164 - 239
Target Start/End: Original strand, 41632 - 41707
Alignment:
Q  164 atgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatg 239  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  41632 atgattgtgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 41707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 37012 - 36980
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    |||||||||||||||||||||||||||||||||    
T  37012 atgattatgataaagactaacccccttacctta 36980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 93; Significance: 2e-45; HSPs: 3)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 10 - 196
Target Start/End: Original strand, 9000 - 9192
Alignment:
Q  10 catttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagc 109  Q
    |||||||||||| || || ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||    
T  9000 catttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagatggagcacgaatttagc 9099  T
Q  110 aacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatgataaagactaacccccttacctta 196  Q
    |||||| |||||  ||   ||||| ||||| ||||||||||| || ||||    ||||||||||||||||| ||||||||| | |||||||||    
T  9100 aacaattatccaattatgaaaaatacataccacatttgaaaaattgcaaaaatgatgatgatgattatgatgaagactaacacacttacctta 9192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 96 - 196
Target Start/End: Original strand, 146838 - 146938
Alignment:
Q  96 agcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctt 195  Q
    |||| |||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  146838 agcatgaatttaggaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctt 146937  T
Q  196 a 196  Q
    |    
T  146938 a 146938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 3 - 148
Target Start/End: Original strand, 148865 - 149012
Alignment:
Q  3 aacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 102  Q
    ||||| |||||||||||||||| || ||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||| |    
T  148865 aacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacaa 148964  T
Q  103 atttagcaacaatcatccataat--caaaattcatacaacatttgaaa 148  Q
    ||||| ||||||| ||| || ||   ||||||||||||||||||||||    
T  148965 atttaacaacaattatcaattatgcaaaaattcatacaacatttgaaa 149012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772 (Bit Score: 88; Significance: 2e-42; HSPs: 2)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 5674 - 5785
Alignment:
Q  4 acttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaa 103  Q
    |||| ||||||||||||||||||| ||||||||| ||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||    
T  5674 acttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcaaagttggagcacgaa 5773  T
Q  104 tttagcaacaat 115  Q
    ||||||||||||    
T  5774 tttagcaacaat 5785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 5846 - 5878
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    ||||||||| |||||||||||||||||||||||    
T  5846 atgattatggtaaagactaacccccttacctta 5878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 81; Significance: 3e-38; HSPs: 3)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 10 - 122
Target Start/End: Original strand, 13657 - 13769
Alignment:
Q  10 catttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagc 109  Q
    |||||||||||| || || ||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  13657 catttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcaaagttagagcacgaatttagc 13756  T
Q  110 aacaatcatccat 122  Q
    |||||| ||||||    
T  13757 aacaattatccat 13769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 164 - 239
Target Start/End: Original strand, 42677 - 42749
Alignment:
Q  164 atgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatg 239  Q
    |||||||||||||| |||||||||||||||||   ||||||||||||||||||||||||||||||| |||||||||    
T  42677 atgattatgataaaaactaacccccttacctt---tatctccaactattagctctagcttcacttttgctcctatg 42749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 13824 - 13856
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    ||||||||||| |||||||||||||||||||||    
T  13824 atgattatgatgaagactaacccccttacctta 13856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 81; Significance: 3e-38; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 48331 - 48443
Alignment:
Q  3 aacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 102  Q
    ||||| ||||||||||| |||| || ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||    
T  48331 aacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattacagttggagcacga 48430  T
Q  103 atttagcaacaat 115  Q
    |||||||||||||    
T  48431 atttagcaacaat 48443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 20493 - 20567
Alignment:
Q  165 tgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatg 239  Q
    |||||||||| || |||||||||||||||||||||||| |||||||||| ||| ||||||| ||| |||||||||    
T  20493 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcatttttgctcctatg 20567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1542 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold1542
Description:

Target: scaffold1542; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 20 - 122
Target Start/End: Complemental strand, 636 - 534
Alignment:
Q  20 tatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatc 119  Q
    ||||| || ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  636 tatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatc 537  T
Q  120 cat 122  Q
    |||    
T  536 cat 534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 10 - 122
Target Start/End: Original strand, 41799 - 41911
Alignment:
Q  10 catttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagc 109  Q
    |||||||||||| || || ||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||| |||| ||||||||||||| |    
T  41799 catttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagttagagcacgaatttaac 41898  T
Q  110 aacaatcatccat 122  Q
    |||||| ||||||    
T  41899 aacaattatccat 41911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 196
Target Start/End: Original strand, 41957 - 41997
Alignment:
Q  156 aaatgatgatgattatgataaagactaacccccttacctta 196  Q
    ||||||  ||||||||||| |||||||||||||||||||||    
T  41957 aaatgaacatgattatgatgaagactaacccccttacctta 41997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 73; Significance: 2e-33; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 107891 - 108003
Alignment:
Q  3 aacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 102  Q
    ||||| |||||||| || |||| || ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||    
T  107891 aacttatcatttttgcacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattacagttggagcacga 107990  T
Q  103 atttagcaacaat 115  Q
    |||||| ||||||    
T  107991 atttagtaacaat 108003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 64637 - 64527
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatc-----aattcatgcatacaaacatatcatcaaagttgg 95  Q
    ||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||| || |||     |||||||||||| ||||||| ||||| ||   |    
T  64637 ataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaatataattcatgcatataaacataacatcacagcaag 64538  T
Q  96 agcacgaattt 106  Q
    |||||||||||    
T  64537 agcacgaattt 64527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 65 - 107
Target Start/End: Complemental strand, 89905 - 89863
Alignment:
Q  65 ttcatgcatacaaacatatcatcaaagttggagcacgaattta 107  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  89905 ttcatgcatacaaacatatcatcatagttggagcacgaattta 89863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 122
Target Start/End: Complemental strand, 34571 - 34460
Alignment:
Q  11 atttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 110  Q
    ||||||||| | || || ||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||| |||| ||||||||||||||||    
T  34571 atttttacacaattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagca 34472  T
Q  111 acaatcatccat 122  Q
    | ||| ||||||    
T  34471 ataattatccat 34460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 164 - 239
Target Start/End: Original strand, 80187 - 80262
Alignment:
Q  164 atgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatg 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  80187 atgattatgataaagactaacccccttaccttaattatctccaactattagctcaagcttcacttttgctcctatg 80262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 178 - 283
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||| || ||||||||||||||||||||||| ||||| ||   ||||||    
T  178 ataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcacagcaagagcac 277  T
Q  101 gaattt 106  Q
    ||||||    
T  278 gaattt 283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 239
Target Start/End: Original strand, 30417 - 30492
Alignment:
Q  164 atgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatg 239  Q
    ||||||||||| || | |||||||||||||||||||||| |||| ||||| ||| ||||||||||| ||| |||||    
T  30417 atgattatgatgaaaaataacccccttaccttaattatcaccaattattaactcaagcttcacttttgcttctatg 30492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 65; Significance: 1e-28; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 163 - 239
Target Start/End: Complemental strand, 166197 - 166121
Alignment:
Q  163 gatgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatg 239  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  166197 gatgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 166121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 163 - 238
Target Start/End: Complemental strand, 162111 - 162036
Alignment:
Q  163 gatgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctat 238  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  162111 gatgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 162036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 237
Target Start/End: Complemental strand, 116483 - 116410
Alignment:
Q  164 atgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 237  Q
    ||||||||||| ||  ||||||||||||||||||||||| |||| |  |||| | |||||||||||||||||||    
T  116483 atgattatgatgaaatctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 116410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 13432 - 13325
Alignment:
Q  3 aacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacga 102  Q
    ||||| |||||||||||||||| || ||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||| | |  ||||||||    
T  13432 aacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacactaagagcacga 13333  T
Q  103 atttagca 110  Q
    || |||||    
T  13332 atctagca 13325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 164 - 239
Target Start/End: Complemental strand, 31212 - 31137
Alignment:
Q  164 atgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatg 239  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  31212 atgattgtgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 31137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 164 - 238
Target Start/End: Complemental strand, 5809 - 5735
Alignment:
Q  164 atgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctat 238  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  5809 atgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 5735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 164 - 238
Target Start/End: Complemental strand, 6015 - 5941
Alignment:
Q  164 atgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctat 238  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  6015 atgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 5941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 62; Significance: 7e-27; HSPs: 2)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 9456 - 9371
Alignment:
Q  3 aacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatca 88  Q
    ||||| |||||||||||||||| || ||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  9456 aacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatca 9371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 16354 - 16269
Alignment:
Q  3 aacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatca 88  Q
    ||||| |||||||||||||||| || ||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  16354 aacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatca 16269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 3114 - 3215
Alignment:
Q  10 catttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagc 109  Q
    |||||||||||| || || ||||||||| |||||||||||||||||||| ||||||||||| ||||||||||| ||||| ||   |||||||||||||||    
T  3114 catttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatggatacaaacataacatcacagcaagagcacgaatttagc 3213  T
Q  110 aa 111  Q
    ||    
T  3214 aa 3215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 163 - 239
Target Start/End: Complemental strand, 385 - 309
Alignment:
Q  163 gatgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatg 239  Q
    ||||||||||||||||| ||||||| |||||||||||||| |||||||||||||| ||||||||||| |||||||||    
T  385 gatgattatgataaagaataaccccgttaccttaattatcaccaactattagctcaagcttcacttttgctcctatg 309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 43140 - 43226
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatc 87  Q
    |||||||  ||||||||||||||| || ||||||||| |||||||||||||||||||| ||||||||||||||| ||||||| ||||    
T  43140 ataacttaacatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatagaaacataacatc 43226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1711 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold1711
Description:

Target: scaffold1711; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 1413 - 1304
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||| |||||||| ||||| | || ||||||||| |||||||||||||||| ||  ||||||||||||||||||||||| ||||| ||   ||||||    
T  1413 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcac 1314  T
Q  101 gaatttagca 110  Q
    ||||||||||    
T  1313 gaatttagca 1304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 14170 - 14083
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatca 88  Q
    ||||||| |||||||||||||||| || ||||||||| || |||||||||| |||||| ||||||||||||||||| ||||| |||||    
T  14170 ataacttatcatttttacatatttcaacatgtaatttcactaacaatcatataattatcatcaattcatgcatacagacataacatca 14083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 21225 - 21115
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 100  Q
    ||||||| |||||||||||||||| || ||||||||| || |||||||||| |||||| ||||||| ||| ||||||||||| ||||| |    ||||||    
T  21225 ataacttatcatttttacatatttgaacatgtaatttcactaacaatcatataattatcatcaattaatggatacaaacataacatcacaacaagagcac 21126  T
Q  101 gaatttagcaa 111  Q
    |||||||||||    
T  21125 gaatttagcaa 21115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 5325 - 5254
Alignment:
Q  1 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgca 72  Q
    ||||||| |||||||||||||||| || ||||||||| |||||||||||||||||||| |||||||||||||    
T  5325 ataacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 5254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 105
Target Start/End: Complemental strand, 102963 - 102923
Alignment:
Q  65 ttcatgcatacaaacatatcatcaaagttggagcacgaatt 105  Q
    ||||||||| |||||||||||||| | ||||||||||||||    
T  102963 ttcatgcattcaaacatatcatcataattggagcacgaatt 102923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1164 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold1164
Description:

Target: scaffold1164; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 1701 - 1775
Alignment:
Q  165 tgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatg 239  Q
    |||||||||| || |||||||||||||||||||||||| |||||||||| ||| ||||||||||| |||||||||    
T  1701 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatg 1775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 19881 - 19807
Alignment:
Q  165 tgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatg 239  Q
    |||||||||| || |||||||||||||||||||||||| |||||||||| ||| ||||||||||| |||||||||    
T  19881 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatg 19807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 24185 - 24111
Alignment:
Q  165 tgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatg 239  Q
    |||||||||| || |||||||||||||||||||||||| |||||||||| ||| ||||||| ||| |||||||||    
T  24185 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcatttttgctcctatg 24111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 3360 - 3453
Alignment:
Q  29 atgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 122  Q
    ||||||||| |||||||||||||||| ||| || ||||||||||||||||| || ||||| || | |||||||||||||||| |||| ||||||    
T  3360 atgtaatttcaccaacaatcatacaaatatcattaattcatgcatacaaacttaacatcacagctagagcacgaatttagcatcaattatccat 3453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 165 - 235
Target Start/End: Original strand, 94 - 164
Alignment:
Q  165 tgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctcc 235  Q
    |||||||||| || |||||||||||||||||||||||| |||||||||| ||| ||||||||||| |||||    
T  94 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcc 164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 6335 - 6261
Alignment:
Q  165 tgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatg 239  Q
    |||||||||| || |||||||||||||||||||||||| || ||||||| ||| ||||||||||| |||||||||    
T  6335 tgattatgatgaacactaacccccttaccttaattatcacccactattaactcaagcttcacttttgctcctatg 6261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 202
Target Start/End: Complemental strand, 41 - 4
Alignment:
Q  165 tgattatgataaagactaacccccttaccttaattatc 202  Q
    |||||||||| || ||||||||||||||||||||||||    
T  41 tgattatgatgaacactaacccccttaccttaattatc 4  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 3876 - 3936
Alignment:
Q  12 tttttacatatttaaaaatgtaatttaaccaacaatcatacaattattatcaattcatgca 72  Q
    ||||||||||||| || ||||||||| |||||||||||||||||||| |||||||||||||    
T  3876 tttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 3936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 56222 - 56106
Alignment:
Q  1 ataacttttcatttttacata-tttaaaa-atgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagc 98  Q
    |||||||  ||||| |||||| ||||||| ||||||||| | | |||||||||||||||| ||||| ||||||| || || ||| ||||| |||| ||||    
T  56222 ataacttgacatttatacatactttaaaacatgtaatttcagccacaatcatacaattatcatcaaatcatgcacacgaaaataacatcacagttagagc 56123  T
Q  99 acgaatttagcaacaat 115  Q
    ||||||||| |||||||    
T  56122 acgaatttaacaacaat 56106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 196
Target Start/End: Complemental strand, 10424 - 10256
Alignment:
Q  29 atgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat-aatca 127  Q
    ||||||||| ||| |||| ||||| || || ||||||||||||| |  || ||||||||| ||   ||||||||||||||||||||| || ||| || |     
T  10424 atgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatatcatcacagcaagagcacgaatttagcaacaattattcatcaaccc 10325  T
Q  128 aaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 196  Q
    |  ||||||||||||  ||||||  | ||| |||  ||||||||||  ||||| |||||||||||||||    
T  10324 attttcatacaacatgagaaaatgcaaaaattgaacatgattatgaagaagacaaacccccttacctta 10256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 39 - 106
Target Start/End: Original strand, 8189 - 8257
Alignment:
Q  39 accaacaatcatacaattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 106  Q
    ||||||||  || ||||||| ||||||| |||||||||||||||||||||| |||| ||||||||||||    
T  8189 accaacaacaattcaattatcatcaatttcatgcatacaaacatatcatcatagttagagcacgaattt 8257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 106
Target Start/End: Complemental strand, 70361 - 70307
Alignment:
Q  53 aattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 106  Q
    |||||| ||||||| |||||||||||||||||||||| |||||||| ||||||||    
T  70361 aattatcatcaatttcatgcatacaaacatatcatcatagttggagtacgaattt 70307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 57424 - 57392
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    |||||||||||||||||||||||||||||||||    
T  57424 atgattatgataaagactaacccccttacctta 57392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 237
Target Start/End: Complemental strand, 1436 - 1363
Alignment:
Q  164 atgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 237  Q
    ||||||||||| ||  ||||||||||||||| ||||||| |||| |  |||||| ||||||||||||| |||||    
T  1436 atgattatgatgaattctaacccccttacctcaattatcaccaattcctagctcaagcttcactttagttccta 1363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 106
Target Start/End: Complemental strand, 1587 - 1546
Alignment:
Q  65 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 106  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  1587 ttcatgcatacaaacatatcatcatagttagagcacgaattt 1546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 106
Target Start/End: Complemental strand, 8732 - 8691
Alignment:
Q  65 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 106  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  8732 ttcatgcatacaaacatatcatcatagttagagcacgaattt 8691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 237
Target Start/End: Original strand, 35816 - 35873
Alignment:
Q  180 ctaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 237  Q
    ||||||||||||||||||||||| |||| |  |||| | |||||||||||||||||||    
T  35816 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 35873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 197
Target Start/End: Complemental strand, 193429 - 193396
Alignment:
Q  164 atgattatgataaagactaacccccttaccttaa 197  Q
    ||||||||||||||||||||||||||||||||||    
T  193429 atgattatgataaagactaacccccttaccttaa 193396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 6475 - 6443
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    |||||||||||||||||||||||||||||||||    
T  6475 atgattatgataaagactaacccccttacctta 6443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 910 - 878
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    |||||||||||||||||||||||||||||||||    
T  910 atgattatgataaagactaacccccttacctta 878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 9914 - 9882
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    |||||||||||||||||||||||||||||||||    
T  9914 atgattatgataaagactaacccccttacctta 9882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 13317 - 13285
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    |||||||||||||||||||||||||||||||||    
T  13317 atgattatgataaagactaacccccttacctta 13285  T

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Target: scaffold0032 (Bit Score: 33; Significance: 0.000000001; HSPs: 5)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 55904 - 55936
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    |||||||||||||||||||||||||||||||||    
T  55904 atgattatgataaagactaacccccttacctta 55936  T

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Target: scaffold0032; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 108107 - 108075
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    |||||||||||||||||||||||||||||||||    
T  108107 atgattatgataaagactaacccccttacctta 108075  T

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Target: scaffold0032; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 106
Target Start/End: Complemental strand, 93814 - 93773
Alignment:
Q  65 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 106  Q
    |||||||||||| ||||||||||| | |||||||||||||||    
T  93814 ttcatgcatacatacatatcatcataattggagcacgaattt 93773  T

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Target: scaffold0032; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 237
Target Start/End: Complemental strand, 104550 - 104477
Alignment:
Q  164 atgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 237  Q
    ||||||||||| ||  ||||||| ||||||||||||| | | || | ||||| | |||||||||||||||||||    
T  104550 atgattatgatgaattctaacccacttaccttaattagcacaaattcttagcccaagcttcactttagctccta 104477  T

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Target: scaffold0032; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 106
Target Start/End: Complemental strand, 104691 - 104623
Alignment:
Q  39 accaacaatcatacaattattatcaattca-tgcatacaaacatatcatcaaagttggagcacgaattt 106  Q
    ||||||||  || ||||||| ||||||| | |||||||||||||||||||| |||| ||||| ||||||    
T  104691 accaacaacaattcaattatcatcaatttaatgcatacaaacatatcatcatagttagagcatgaattt 104623  T

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Target: scaffold0207 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 196
Target Start/End: Original strand, 18015 - 18058
Alignment:
Q  153 acaaaatgatgatgattatgataaagactaacccccttacctta 196  Q
    ||||||| || ||||||||||| |||||||||||||||||||||    
T  18015 acaaaataattatgattatgatgaagactaacccccttacctta 18058  T

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Target: scaffold0066 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 45201 - 45244
Alignment:
Q  29 atgtaatttaaccaacaatcatacaattattatcaattcatgca 72  Q
    ||||||||| ||| |||||||||||||||| |||||||||||||    
T  45201 atgtaatttcacccacaatcatacaattatcatcaattcatgca 45244  T

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Target: scaffold0066; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 45338 - 45370
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    ||||||||||| |||||||||||||||||||||    
T  45338 atgattatgatgaagactaacccccttacctta 45370  T

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Target: scaffold0409 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0409
Description:

Target: scaffold0409; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 106
Target Start/End: Complemental strand, 1386 - 1348
Alignment:
Q  68 atgcatacaaacatatcatcaaagttggagcacgaattt 106  Q
    ||||||||||||||||||||| |||| ||||||||||||    
T  1386 atgcatacaaacatatcatcatagttagagcacgaattt 1348  T

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Target: scaffold0409; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 106
Target Start/End: Complemental strand, 9641 - 9603
Alignment:
Q  68 atgcatacaaacatatcatcaaagttggagcacgaattt 106  Q
    ||||||||||||||||||||| |||| ||||||||||||    
T  9641 atgcatacaaacatatcatcatagttagagcacgaattt 9603  T

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Target: scaffold0389 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 105
Target Start/End: Original strand, 10854 - 10908
Alignment:
Q  52 caattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaatt 105  Q
    ||||||| ||||||| |||||||||||||||||||||| || | |||||||||||    
T  10854 caattatcatcaatttcatgcatacaaacatatcatcatagatagagcacgaatt 10908  T

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Target: scaffold0151 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 106
Target Start/End: Complemental strand, 22476 - 22422
Alignment:
Q  53 aattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 106  Q
    |||||| ||||||| |||||||||||||||||||||| | || ||||||||||||    
T  22476 aattatcatcaatttcatgcatacaaacatatcatcatatttagagcacgaattt 22422  T

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Target: scaffold1295 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1295
Description:

Target: scaffold1295; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 237
Target Start/End: Original strand, 442 - 499
Alignment:
Q  180 ctaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 237  Q
    ||||||||||||||| | ||||| |||| |  |||||| |||||||||||||||||||    
T  442 ctaacccccttacctcagttatcaccaattcctagctcaagcttcactttagctccta 499  T

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Target: scaffold0053 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 237
Target Start/End: Complemental strand, 76756 - 76699
Alignment:
Q  180 ctaacccccttaccttaattatctccaactattagctctagcttcactttagctccta 237  Q
    |||||||||||||||||||||||  ||| |  |||| | |||||||||||||||||||    
T  76756 ctaacccccttaccttaattatcagcaattcctagcccaagcttcactttagctccta 76699  T

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Target: scaffold0367 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 17241 - 17209
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    ||||||||||| |||||||||||||||||||||    
T  17241 atgattatgatgaagactaacccccttacctta 17209  T

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Target: scaffold0335 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 5508 - 5476
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    ||||||||||| |||||||||||||||||||||    
T  5508 atgattatgatgaagactaacccccttacctta 5476  T

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Target: scaffold0303 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 4378 - 4346
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    ||||||||||||||| |||||||||||||||||    
T  4378 atgattatgataaagtctaacccccttacctta 4346  T

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Target: scaffold0234 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 17336 - 17304
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    ||||||||||||||||||||||| |||||||||    
T  17336 atgattatgataaagactaacccgcttacctta 17304  T

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Target: scaffold0173 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 5549 - 5581
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    ||||||||||| |||||||||||||||||||||    
T  5549 atgattatgatgaagactaacccccttacctta 5581  T

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Target: scaffold0138 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 106
Target Start/End: Complemental strand, 22497 - 22429
Alignment:
Q  39 accaacaatcatacaattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 106  Q
    ||||||||  || ||||||| ||||||| ||||||||||||||||| |||  |||| ||||||||||||    
T  22497 accaacaacaattcaattatcatcaatttcatgcatacaaacatattatcctagttagagcacgaattt 22429  T

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Target: scaffold0118 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 34340 - 34308
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    ||||||||||| |||||||||||||||||||||    
T  34340 atgattatgatgaagactaacccccttacctta 34308  T

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Target: scaffold0039 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 12450 - 12418
Alignment:
Q  164 atgattatgataaagactaacccccttacctta 196  Q
    |||||||||||||| ||||||||||||||||||    
T  12450 atgattatgataaaaactaacccccttacctta 12418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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