View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0300_low_19 (Length: 229)

Name: NF0300_low_19
Description: NF0300
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0300_low_19
NF0300_low_19
[»] chr3 (48 HSPs)
chr3 (1-229)||(16744007-16744235)
chr3 (2-195)||(13839038-13839232)
chr3 (1-195)||(14842487-14842681)
chr3 (2-195)||(12030073-12030266)
chr3 (15-195)||(2049967-2050147)
chr3 (59-228)||(19231982-19232154)
chr3 (75-195)||(19260749-19260869)
chr3 (1-121)||(2449238-2449358)
chr3 (2-131)||(51158008-51158137)
chr3 (2-158)||(15858986-15859143)
chr3 (1-121)||(17912483-17912602)
chr3 (1-121)||(13975722-13975841)
chr3 (2-114)||(15936634-15936746)
chr3 (1-121)||(45860949-45861068)
chr3 (163-228)||(3992873-3992938)
chr3 (8-121)||(13954890-13955002)
chr3 (160-229)||(15857129-15857198)
chr3 (163-228)||(55513193-55513258)
chr3 (163-228)||(2844514-2844579)
chr3 (163-218)||(17955861-17955916)
chr3 (163-228)||(54037991-54038056)
chr3 (2-196)||(15614978-15615170)
chr3 (2-114)||(15938476-15938588)
chr3 (163-224)||(45581954-45582016)
chr3 (163-228)||(7854305-7854370)
chr3 (9-87)||(16821291-16821369)
chr3 (1-109)||(55316363-55316471)
chr3 (64-105)||(14080715-14080756)
chr3 (163-195)||(2449152-2449184)
chr3 (163-195)||(16261777-16261809)
chr3 (163-195)||(16933869-16933901)
chr3 (163-195)||(17912398-17912430)
chr3 (163-195)||(23492696-23492728)
chr3 (163-195)||(38168237-38168269)
chr3 (1-109)||(41270219-41270327)
chr3 (163-195)||(53771365-53771397)
chr3 (179-229)||(17205019-17205069)
chr3 (163-229)||(38810875-38810941)
chr3 (164-229)||(15550922-15550987)
chr3 (163-195)||(11986080-11986112)
chr3 (181-229)||(12031849-12031897)
chr3 (163-195)||(13954804-13954836)
chr3 (163-195)||(14285289-14285321)
chr3 (163-195)||(19947026-19947058)
chr3 (163-195)||(30153265-30153297)
chr3 (163-195)||(33342204-33342236)
chr3 (163-195)||(45861122-45861154)
chr3 (163-195)||(51961031-51961063)
[»] chr1 (20 HSPs)
chr1 (2-229)||(41394366-41394593)
chr1 (1-195)||(20913173-20913367)
chr1 (1-195)||(20931488-20931682)
chr1 (25-195)||(37844374-37844546)
chr1 (25-195)||(20445846-20446019)
chr1 (2-195)||(20893551-20893745)
chr1 (25-195)||(20531611-20531783)
chr1 (1-121)||(51452635-51452755)
chr1 (163-228)||(21860334-21860399)
chr1 (163-228)||(44034838-44034903)
chr1 (2-87)||(2116399-2116484)
chr1 (2-196)||(45051567-45051759)
chr1 (129-229)||(27675086-27675184)
chr1 (163-228)||(41218728-41218793)
chr1 (1-87)||(18601140-18601226)
chr1 (1-71)||(22227952-22228022)
chr1 (1-71)||(22232649-22232719)
chr1 (1-109)||(5072388-5072496)
chr1 (163-194)||(15861327-15861358)
chr1 (163-195)||(51452809-51452841)
[»] chr2 (31 HSPs)
chr2 (8-228)||(20627205-20627426)
chr2 (2-195)||(462882-463075)
chr2 (19-228)||(43642848-43643059)
chr2 (2-228)||(19794596-19794823)
chr2 (2-195)||(36982364-36982560)
chr2 (2-195)||(8891386-8891581)
chr2 (1-121)||(19689401-19689521)
chr2 (1-121)||(23820214-23820334)
chr2 (1-121)||(14906440-14906560)
chr2 (2-195)||(24341309-24341508)
chr2 (1-121)||(20015154-20015274)
chr2 (101-195)||(22863171-22863267)
chr2 (2-121)||(25265390-25265509)
chr2 (1-121)||(17396653-17396772)
chr2 (163-228)||(22275045-22275110)
chr2 (163-228)||(22284278-22284343)
chr2 (164-228)||(15633538-15633602)
chr2 (1-71)||(7507894-7507964)
chr2 (163-196)||(19689314-19689347)
chr2 (163-195)||(9652796-9652828)
chr2 (163-195)||(14906354-14906386)
chr2 (163-195)||(23820388-23820420)
chr2 (163-194)||(25213372-25213403)
chr2 (179-229)||(43646232-43646282)
chr2 (163-195)||(7507757-7507789)
chr2 (163-195)||(17396567-17396599)
chr2 (25-109)||(19886661-19886745)
chr2 (163-195)||(20015328-20015360)
chr2 (163-195)||(28031134-28031166)
chr2 (129-195)||(31146073-31146138)
chr2 (163-195)||(33128372-33128404)
[»] chr4 (26 HSPs)
chr4 (2-195)||(122033-122226)
chr4 (19-228)||(54118135-54118346)
chr4 (2-195)||(13246574-13246769)
chr4 (2-195)||(15675009-15675208)
chr4 (1-121)||(26680343-26680463)
chr4 (2-195)||(10104170-10104369)
chr4 (1-121)||(10488705-10488825)
chr4 (1-121)||(16327926-16328046)
chr4 (59-195)||(33240901-33241043)
chr4 (1-121)||(13048221-13048341)
chr4 (163-228)||(25119074-25119139)
chr4 (2-94)||(31115773-31115865)
chr4 (89-195)||(31132545-31132657)
chr4 (9-87)||(10644371-10644449)
chr4 (163-228)||(5682395-5682460)
chr4 (163-195)||(14952085-14952117)
chr4 (163-195)||(15135907-15135939)
chr4 (163-195)||(15272211-15272243)
chr4 (163-195)||(16327840-16327872)
chr4 (163-195)||(16609013-16609045)
chr4 (163-195)||(26680517-26680549)
chr4 (163-229)||(41165815-41165881)
chr4 (9-105)||(40885570-40885667)
chr4 (163-195)||(8045272-8045304)
chr4 (163-195)||(16523146-16523178)
chr4 (1-109)||(47357798-47357906)
[»] scaffold0266 (2 HSPs)
scaffold0266 (2-195)||(1268-1462)
scaffold0266 (2-195)||(3508-3701)
[»] scaffold0023 (2 HSPs)
scaffold0023 (2-195)||(48742-48935)
scaffold0023 (163-195)||(61122-61154)
[»] chr7 (42 HSPs)
chr7 (8-228)||(3060116-3060336)
chr7 (2-195)||(16211910-16212103)
chr7 (2-195)||(13036938-13037133)
chr7 (2-195)||(36052808-36053003)
chr7 (2-195)||(11580661-11580858)
chr7 (1-121)||(11516370-11516490)
chr7 (1-121)||(15441564-15441684)
chr7 (1-121)||(30262129-30262249)
chr7 (1-121)||(7293159-7293279)
chr7 (15-121)||(25292338-25292444)
chr7 (2-121)||(47481031-47481150)
chr7 (2-114)||(18253842-18253954)
chr7 (163-228)||(32493913-32493978)
chr7 (24-120)||(13321182-13321278)
chr7 (163-224)||(126738-126799)
chr7 (163-228)||(1936884-1936949)
chr7 (2-86)||(16478985-16479069)
chr7 (1-87)||(13572820-13572906)
chr7 (1-193)||(295893-296086)
chr7 (163-228)||(111136-111201)
chr7 (1-87)||(13911046-13911132)
chr7 (129-229)||(13377819-13377917)
chr7 (164-228)||(7283923-7283987)
chr7 (1-109)||(10989553-10989661)
chr7 (1-87)||(2437601-2437687)
chr7 (79-121)||(14113989-14114031)
chr7 (79-121)||(14423639-14423681)
chr7 (163-195)||(2029244-2029276)
chr7 (163-195)||(7293333-7293365)
chr7 (163-195)||(11516544-11516576)
chr7 (163-195)||(14113903-14113935)
chr7 (163-195)||(15441478-15441510)
chr7 (126-195)||(15709428-15709501)
chr7 (163-195)||(30262043-30262075)
chr7 (163-195)||(42056188-42056220)
chr7 (179-229)||(13389693-13389743)
chr7 (163-195)||(371417-371449)
chr7 (163-195)||(3049905-3049937)
chr7 (163-195)||(13321334-13321366)
chr7 (163-191)||(15516765-15516793)
chr7 (163-195)||(25124450-25124482)
chr7 (163-195)||(47480944-47480976)
[»] chr8 (29 HSPs)
chr8 (19-228)||(16404867-16405077)
chr8 (2-195)||(16193643-16193835)
chr8 (2-195)||(24928716-24928910)
chr8 (2-195)||(43373392-43373587)
chr8 (1-121)||(5238230-5238350)
chr8 (1-121)||(22907214-22907334)
chr8 (1-121)||(24661248-24661368)
chr8 (1-121)||(43685689-43685809)
chr8 (163-228)||(274766-274831)
chr8 (163-228)||(641018-641083)
chr8 (163-228)||(826824-826889)
chr8 (163-228)||(24716729-24716794)
chr8 (1-121)||(17345712-17345832)
chr8 (2-109)||(6774258-6774365)
chr8 (2-109)||(24549126-24549233)
chr8 (1-87)||(21844594-21844680)
chr8 (1-87)||(21851987-21852073)
chr8 (163-228)||(39115598-39115663)
chr8 (64-105)||(23226076-23226117)
chr8 (163-195)||(5238404-5238436)
chr8 (163-195)||(22907128-22907160)
chr8 (163-195)||(24385652-24385684)
chr8 (163-195)||(24661162-24661194)
chr8 (1-109)||(30120866-30120974)
chr8 (163-195)||(43685863-43685895)
chr8 (163-195)||(2545265-2545297)
chr8 (163-195)||(3431176-3431208)
chr8 (1-109)||(16674392-16674500)
chr8 (163-195)||(22886654-22886686)
[»] scaffold0106 (1 HSPs)
scaffold0106 (8-195)||(41879-42066)
[»] scaffold0018 (1 HSPs)
scaffold0018 (2-193)||(51110-51301)
[»] scaffold0413 (1 HSPs)
scaffold0413 (10-195)||(5990-6175)
[»] scaffold0175 (1 HSPs)
scaffold0175 (10-195)||(882-1067)
[»] scaffold0001 (2 HSPs)
scaffold0001 (2-195)||(172049-172242)
scaffold0001 (2-195)||(177752-177945)
[»] chr5 (29 HSPs)
chr5 (2-195)||(23507109-23507302)
chr5 (2-195)||(27182471-27182666)
chr5 (2-195)||(18530988-18531186)
chr5 (1-121)||(20623112-20623232)
chr5 (1-121)||(21233528-21233648)
chr5 (1-121)||(37052887-37053007)
chr5 (2-195)||(22053753-22053952)
chr5 (1-121)||(16536340-16536460)
chr5 (1-119)||(25900408-25900526)
chr5 (1-121)||(34939420-34939540)
chr5 (2-109)||(29188284-29188391)
chr5 (1-87)||(27009985-27010071)
chr5 (164-228)||(11584374-11584438)
chr5 (1-87)||(4200007-4200093)
chr5 (1-87)||(43443417-43443503)
chr5 (163-195)||(16105967-16105999)
chr5 (1-109)||(19500043-19500151)
chr5 (163-195)||(20623286-20623318)
chr5 (163-195)||(21233442-21233474)
chr5 (1-109)||(22366481-22366589)
chr5 (1-109)||(25426772-25426880)
chr5 (163-195)||(25900320-25900352)
chr5 (163-195)||(37053061-37053093)
chr5 (1-87)||(18778014-18778100)
chr5 (25-109)||(12542-12626)
chr5 (163-195)||(108728-108760)
chr5 (163-195)||(9730278-9730310)
chr5 (163-195)||(16536514-16536546)
chr5 (1-109)||(21073595-21073703)
[»] scaffold0008 (1 HSPs)
scaffold0008 (15-195)||(128095-128275)
[»] chr6 (26 HSPs)
chr6 (2-195)||(23153591-23153786)
chr6 (1-194)||(14626045-14626238)
chr6 (126-195)||(23148266-23148335)
chr6 (2-121)||(35009439-35009558)
chr6 (163-228)||(19983159-19983224)
chr6 (163-228)||(35015024-35015089)
chr6 (1-121)||(1657748-1657868)
chr6 (1-121)||(15862614-15862734)
chr6 (2-196)||(1650020-1650212)
chr6 (163-228)||(18583640-18583705)
chr6 (38-121)||(27751605-27751688)
chr6 (163-195)||(18002395-18002427)
chr6 (163-195)||(23995247-23995279)
chr6 (163-195)||(26090059-26090091)
chr6 (163-194)||(4991396-4991427)
chr6 (165-195)||(15742120-15742150)
chr6 (179-229)||(21623506-21623556)
chr6 (24-121)||(29666040-29666137)
chr6 (163-195)||(1657661-1657693)
chr6 (163-195)||(15862789-15862821)
chr6 (163-195)||(18823283-18823315)
chr6 (163-195)||(18839138-18839170)
chr6 (1-81)||(25175707-25175787)
chr6 (1-109)||(27653983-27654091)
chr6 (163-195)||(27751742-27751774)
chr6 (163-195)||(32276659-32276691)
[»] scaffold0162 (3 HSPs)
scaffold0162 (2-195)||(26340-26534)
scaffold0162 (2-121)||(8180-8299)
scaffold0162 (179-229)||(6884-6934)
[»] scaffold0077 (2 HSPs)
scaffold0077 (2-196)||(36836-37032)
scaffold0077 (164-228)||(15334-15398)
[»] scaffold0012 (2 HSPs)
scaffold0012 (2-195)||(247366-247561)
scaffold0012 (163-195)||(34075-34107)
[»] scaffold0302 (1 HSPs)
scaffold0302 (2-195)||(12257-12450)
[»] scaffold0195 (2 HSPs)
scaffold0195 (2-192)||(19350-19543)
scaffold0195 (2-121)||(21434-21553)
[»] scaffold0028 (3 HSPs)
scaffold0028 (19-195)||(89378-89556)
scaffold0028 (70-195)||(107708-107835)
scaffold0028 (163-194)||(130880-130911)
[»] scaffold0009 (1 HSPs)
scaffold0009 (2-195)||(272169-272362)
[»] scaffold0218 (1 HSPs)
scaffold0218 (2-185)||(4996-5180)
[»] scaffold0498 (1 HSPs)
scaffold0498 (9-195)||(9029-9215)
[»] scaffold0011 (1 HSPs)
scaffold0011 (2-195)||(123087-123283)
[»] scaffold0141 (4 HSPs)
scaffold0141 (1-121)||(26938-27058)
scaffold0141 (1-114)||(22683-22796)
scaffold0141 (163-195)||(22857-22889)
scaffold0141 (163-195)||(27112-27144)
[»] scaffold0124 (2 HSPs)
scaffold0124 (1-121)||(1582-1702)
scaffold0124 (163-195)||(1496-1528)
[»] scaffold0078 (3 HSPs)
scaffold0078 (1-121)||(37066-37186)
scaffold0078 (163-228)||(41632-41697)
scaffold0078 (163-195)||(36980-37012)
[»] scaffold0025 (3 HSPs)
scaffold0025 (101-195)||(146844-146938)
scaffold0025 (2-195)||(8993-9192)
scaffold0025 (2-147)||(148865-149012)
[»] scaffold0772 (2 HSPs)
scaffold0772 (3-114)||(5674-5785)
scaffold0772 (163-195)||(5846-5878)
[»] scaffold0132 (3 HSPs)
scaffold0132 (2-121)||(13650-13769)
scaffold0132 (163-228)||(42677-42739)
scaffold0132 (163-195)||(13824-13856)
[»] scaffold1542 (1 HSPs)
scaffold1542 (19-121)||(534-636)
[»] scaffold0049 (2 HSPs)
scaffold0049 (2-114)||(48331-48443)
scaffold0049 (164-224)||(20493-20553)
[»] scaffold0125 (2 HSPs)
scaffold0125 (2-121)||(41792-41911)
scaffold0125 (155-195)||(41957-41997)
[»] scaffold0034 (1 HSPs)
scaffold0034 (163-228)||(80187-80252)
[»] scaffold0026 (3 HSPs)
scaffold0026 (2-114)||(107891-108003)
scaffold0026 (64-106)||(89863-89905)
scaffold0026 (1-52)||(64585-64636)
[»] scaffold0016 (3 HSPs)
scaffold0016 (162-228)||(162045-162111)
scaffold0016 (162-228)||(166131-166197)
scaffold0016 (163-229)||(116417-116483)
[»] scaffold0686 (2 HSPs)
scaffold0686 (163-228)||(5744-5809)
scaffold0686 (163-228)||(5950-6015)
[»] scaffold0184 (1 HSPs)
scaffold0184 (163-228)||(31147-31212)
[»] scaffold0075 (1 HSPs)
scaffold0075 (25-121)||(34460-34556)
[»] scaffold0116 (2 HSPs)
scaffold0116 (1-87)||(179-265)
scaffold0116 (163-228)||(30417-30482)
[»] scaffold0420 (1 HSPs)
scaffold0420 (2-87)||(13347-13432)
[»] scaffold0215 (2 HSPs)
scaffold0215 (2-87)||(9371-9456)
scaffold0215 (2-87)||(16269-16354)
[»] scaffold0342 (1 HSPs)
scaffold0342 (162-228)||(319-385)
[»] scaffold0529 (1 HSPs)
scaffold0529 (2-110)||(3107-3215)
[»] scaffold0076 (1 HSPs)
scaffold0076 (9-86)||(43149-43226)
[»] scaffold1164 (1 HSPs)
scaffold1164 (164-228)||(1701-1765)
[»] scaffold0876 (1 HSPs)
scaffold0876 (164-228)||(94-158)
[»] scaffold0122 (2 HSPs)
scaffold0122 (164-228)||(19817-19881)
scaffold0122 (164-224)||(24125-24185)
[»] scaffold0139 (2 HSPs)
scaffold0139 (1-87)||(14083-14169)
scaffold0139 (1-87)||(21138-21224)
[»] scaffold0022 (1 HSPs)
scaffold0022 (1-71)||(5254-5324)
[»] scaffold1711 (1 HSPs)
scaffold1711 (1-109)||(1304-1412)
[»] scaffold0310 (2 HSPs)
scaffold0310 (164-228)||(6271-6335)
scaffold0310 (164-201)||(4-41)
[»] scaffold0361 (1 HSPs)
scaffold0361 (38-121)||(3370-3453)
[»] scaffold0507 (1 HSPs)
scaffold0507 (163-229)||(1370-1436)
[»] scaffold0004 (1 HSPs)
scaffold0004 (163-196)||(193396-193429)
[»] scaffold0706 (1 HSPs)
scaffold0706 (163-195)||(6443-6475)
[»] scaffold0597 (1 HSPs)
scaffold0597 (163-195)||(878-910)
[»] scaffold0465 (1 HSPs)
scaffold0465 (163-195)||(9882-9914)
[»] scaffold0369 (1 HSPs)
scaffold0369 (15-71)||(3880-3936)
[»] scaffold0251 (1 HSPs)
scaffold0251 (163-195)||(13285-13317)
[»] scaffold0058 (2 HSPs)
scaffold0058 (163-195)||(57392-57424)
scaffold0058 (64-105)||(70307-70348)
[»] scaffold0032 (2 HSPs)
scaffold0032 (163-195)||(55904-55936)
scaffold0032 (163-195)||(108075-108107)
[»] scaffold0207 (1 HSPs)
scaffold0207 (152-195)||(18015-18058)
[»] scaffold0013 (1 HSPs)
scaffold0013 (179-229)||(35816-35866)
[»] scaffold0456 (2 HSPs)
scaffold0456 (64-105)||(1546-1587)
scaffold0456 (64-105)||(8691-8732)
[»] scaffold0123 (1 HSPs)
scaffold0123 (64-105)||(8216-8257)
[»] scaffold0367 (1 HSPs)
scaffold0367 (163-195)||(17209-17241)
[»] scaffold0335 (1 HSPs)
scaffold0335 (163-195)||(5476-5508)
[»] scaffold0303 (1 HSPs)
scaffold0303 (163-195)||(4346-4378)
[»] scaffold0234 (1 HSPs)
scaffold0234 (163-195)||(17304-17336)
[»] scaffold0173 (1 HSPs)
scaffold0173 (163-195)||(5549-5581)
[»] scaffold0118 (1 HSPs)
scaffold0118 (163-195)||(34308-34340)
[»] scaffold0084 (1 HSPs)
scaffold0084 (42-114)||(56106-56178)
[»] scaffold0066 (1 HSPs)
scaffold0066 (163-195)||(45338-45370)
[»] scaffold0039 (1 HSPs)
scaffold0039 (163-195)||(12418-12450)


Alignment Details
Target: chr3 (Bit Score: 181; Significance: 6e-98; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 16744235 - 16744007
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcaca 100  Q
    |||||| |||||| |||||||||||| ||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||     
T  16744235 taacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacacttattatcaattcatggatacaaacatatcatcaaagttggagcacg 16744136  T
Q  101 aatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaattat 200  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||    
T  16744135 aatttaacaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatggtaaagactaacctcgttaccttaattat 16744036  T
Q  201 ctccaactactagctctagcttcacttta 229  Q
    ||||||||| |||||||||||||||||||    
T  16744035 ctccaactattagctctagcttcacttta 16744007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 2 - 195
Target Start/End: Original strand, 13839038 - 13839232
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 101  Q
    ||||| |||||| | | ||||| |||||| ||| | |||| |||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||| |    
T  13839038 aacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacga 13839137  T
Q  102 atttagcaacaatcatccataatcaaaattcatacaacatttgaaaattt-acaaaatgatgatgattatgataaagactaacccccttacctta 195  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  13839138 atttagcaacaattattcataatcaaaattcatacaacatttgaaaatttcacaaaatgatgatgattatgatgaagactaacccccttacctta 13839232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 14842681 - 14842487
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcaca 100  Q
    |||||| |||||| |||| |||| |||||| ||| | ||||||||||||||| ||||  |||||||||||||||||||||||||||| |||||||||||     
T  14842681 taacttatcatttttacacatttgaacatgcaatttcaccaacaatcatacaattatcttcaattcatgcatacaaacatatcatcacagttggagcacg 14842582  T
Q  101 aatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 195  Q
    |||||||||||||| ||||||||||| |||||||||||||||||| ||||| |||| ||| ||||||||||||||||||||||||||||||||||    
T  14842581 aatttagcaacaattatccataatcacaattcatacaacatttgagaatttgcaaagtgaagatgattatgataaagactaacccccttacctta 14842487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 2 - 195
Target Start/End: Complemental strand, 12030266 - 12030073
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 101  Q
    ||||| ||| || ||||||||| |||||| ||| | |||||||||| |||| |||| ||||||||||||||||||||||||||||| ||||||||||| |    
T  12030266 aacttatcacttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacga 12030167  T
Q  102 atttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 195  Q
    ||||||||||||| |||||||| ||||| ||||||||||||||||| || |||||||||||||||||||||||| || ||||||||||||||||    
T  12030166 atttagcaacaattatccataagcaaaagtcatacaacatttgaaatttcacaaaatgatgatgattatgataatgattaacccccttacctta 12030073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 15 - 195
Target Start/End: Original strand, 2049967 - 2050147
Alignment:
Q  15 tacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaat 114  Q
    ||||||||| |||||| ||| | |||||||||| |||| |||| ||||||||| ||||||||||||||| ||| ||||||||||| ||||||||||||||    
T  2049967 tacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcaggcatacaaacatatcgtcacagttggagcacgaatttagcaacaat 2050066  T
Q  115 catccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 195  Q
     |||||||| ||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  2050067 tatccataagcaaaattgatacaacatttgaaatttcacaaaatgatgatgattatgataaagactaacccccttacctta 2050147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 59 - 228
Target Start/End: Original strand, 19231982 - 19232154
Alignment:
Q  59 atcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaattt-acaa 155  Q
    ||||||||||| ||| ||||||||||||| ||||||||||| |||||||||||||| |||||| ||   |||||||||||||||||||||||||| ||||    
T  19231982 atcaattcatgaatataaacatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttcacaa 19232081  T
Q  156 aatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttt 228  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  19232082 aatgatgatgattaagataaagactaacccccttaccttaattatctccaactattagctctaacttcacttt 19232154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 75 - 195
Target Start/End: Complemental strand, 19260869 - 19260749
Alignment:
Q  75 aaacatatcatcaaagttggagcacaaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgata 174  Q
    ||||||||||||| | || |||||| |||||||||||||| ||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  19260869 aaacatatcatcataattagagcacgaatttagcaacaattatccataaaaaaaattcatacaacatttgaaaacttacaaaatgatgatgattatgata 19260770  T
Q  175 aagactaacccccttacctta 195  Q
    |||||||||||||||||||||    
T  19260769 aagactaacccccttacctta 19260749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 2449358 - 2449238
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcaca 100  Q
    |||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||     
T  2449358 taacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacg 2449259  T
Q  101 aatttagcaacaatcatccat 121  Q
    |||||||||||||| ||||||    
T  2449258 aatttagcaacaattatccat 2449238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 2 - 131
Target Start/End: Complemental strand, 51158137 - 51158008
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 101  Q
    ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||| |    
T  51158137 aacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacga 51158038  T
Q  102 atttagcaacaatcatccataatcaaaatt 131  Q
    ||||||||||||| |||||||| |||||||    
T  51158037 atttagcaacaattatccataagcaaaatt 51158008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 2 - 158
Target Start/End: Complemental strand, 15859143 - 15858986
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 101  Q
    ||||| |||||| | ||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||| |    
T  15859143 aacttatcatttgttcatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacga 15859044  T
Q  102 atttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaat 158  Q
    ||||||||||||| |||||| ||   ||||||||||||||| ||| |||||||||||||    
T  15859043 atttagcaacaattatccattatgcaaaaattcatacaacaattg-aaatttacaaaat 15858986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 17912602 - 17912483
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcaca 100  Q
    |||||| |||||| |||||||||||||||| ||| | ||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||     
T  17912602 taacttttcatttttacatatttaaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatc-aagttggagcacg 17912504  T
Q  101 aatttagcaacaatcatccat 121  Q
    |||||||||||||| ||||||    
T  17912503 aatttagcaacaattatccat 17912483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 13975841 - 13975722
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcaca 100  Q
    |||||| |||||| ||| |||||||||||| |||   ||||||||||||||| | || | |||||||||||||||| ||||||||||||||||||||||     
T  13975841 taacttatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatacaa-catatcatcaaagttggagcacg 13975743  T
Q  101 aatttagcaacaatcatccat 121  Q
    |||||||||||||| ||||||    
T  13975742 aatttagcaacaattatccat 13975722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 2 - 114
Target Start/End: Complemental strand, 15936746 - 15936634
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 101  Q
    ||||| |||||| |||| |||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||| | ||||||||||| |    
T  15936746 aacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattacagttggagcacga 15936647  T
Q  102 atttagcaacaat 114  Q
    |||||| ||||||    
T  15936646 atttagtaacaat 15936634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 45860949 - 45861068
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcaca 100  Q
    |||||| |||||| ||| |||||||||||| |||   ||||||||||||||| | || | |||||||||||||||| ||||||||||||||||||||||     
T  45860949 taacttatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatacaa-catatcatcaaagttggagcacg 45861047  T
Q  101 aatttagcaacaatcatccat 121  Q
    |||||||||||||| ||||||    
T  45861048 aatttagcaacaattatccat 45861068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 163 - 228
Target Start/End: Original strand, 3992873 - 3992938
Alignment:
Q  163 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttt 228  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  3992873 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttt 3992938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 13955002 - 13954890
Alignment:
Q  8 tcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttag 107  Q
    |||||| ||| |||||||||||| |||   ||||||||||||||| | || | |||||||||||||||| |||||||||||||||||||||| |||||||    
T  13955002 tcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatacaa-catatcatcaaagttggagcacgaatttag 13954904  T
Q  108 caacaatcatccat 121  Q
    ||||||| ||||||    
T  13954903 caacaattatccat 13954890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 160 - 229
Target Start/End: Complemental strand, 15857198 - 15857129
Alignment:
Q  160 atgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttta 229  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  15857198 atgatgattatgatgaagactaacccccttaccttaattatctccaagtattagctctagcttcacttta 15857129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 163 - 228
Target Start/End: Original strand, 55513193 - 55513258
Alignment:
Q  163 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttt 228  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  55513193 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttt 55513258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 163 - 228
Target Start/End: Original strand, 2844514 - 2844579
Alignment:
Q  163 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttt 228  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  2844514 atgattatgataaaaactaacccccttaccttaattatctcaaactattagctctagcttcacttt 2844579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 163 - 218
Target Start/End: Complemental strand, 17955916 - 17955861
Alignment:
Q  163 atgattatgataaagactaacccccttaccttaattatctccaactactagctcta 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  17955916 atgattatgataaagactaacccccttaccttaattatctccaactattagctcta 17955861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 163 - 228
Target Start/End: Complemental strand, 54038056 - 54037991
Alignment:
Q  163 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttt 228  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||| |||||| |||||||||||    
T  54038056 atgattatgataaaaactaacccccttaccttaattatcaccaactattagctcaagcttcacttt 54037991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 196
Target Start/End: Original strand, 15614978 - 15615170
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 101  Q
    ||||| |||||| ||||||||| |||||| ||| | |||||||||| |||| |||| ||||||||||||||||||| ||| || || |||  ||||||||    
T  15614978 aacttatcatttttacatatttgaacatgtaatttcaccaacaatcctacaattatcatcaattcatgcatacaaatataacaccacagtaagagcacaa 15615077  T
Q  102 atttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaa 196  Q
    || |||||  |||  | ||| || | |  ||||||||||||  |||||  | |||||| |  ||||||||||||||||||||||||||||||||||    
T  15615078 atctagcatgaattgttcatcaacccattttcatacaacatgagaaaa--tgcaaaatta-catgattatgataaagactaacccccttaccttaa 15615170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 114
Target Start/End: Complemental strand, 15938588 - 15938476
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 101  Q
    ||||| |||||| |||| |||| |||||| ||| | ||||||||||||||| |||| |||||||||||  |||||||||||||| | |||||||||||      
T  15938588 aacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgattacaaacatatcattacagttggagcacgt 15938489  T
Q  102 atttagcaacaat 114  Q
    |||||| ||||||    
T  15938488 atttagtaacaat 15938476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 163 - 224
Target Start/End: Original strand, 45581954 - 45582016
Alignment:
Q  163 atgattatgataaagactaacccc-cttaccttaattatctccaactactagctctagcttca 224  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  45581954 atgattatgataaaaactaaccccccttaccttaattatctccaactattagctctagcttca 45582016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 163 - 228
Target Start/End: Original strand, 7854305 - 7854370
Alignment:
Q  163 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttt 228  Q
    ||||||||||| || |||||||||||||||||||||||| ||||||| |||||| |||||||||||    
T  7854305 atgattatgatgaaaactaacccccttaccttaattatcaccaactattagctcaagcttcacttt 7854370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 16821291 - 16821369
Alignment:
Q  9 catttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 87  Q
    ||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||| ||||||||||||||| |||||    
T  16821291 catttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacataacatca 16821369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 55316363 - 55316471
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcaca 100  Q
    |||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||||||||||| ||||| ||   ||||||     
T  55316363 taacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacg 55316462  T
Q  101 aatttagca 109  Q
    |||||||||    
T  55316463 aatttagca 55316471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 14080715 - 14080756
Alignment:
Q  64 ttcatgcatacaaacatatcatcaaagttggagcacaaattt 105  Q
    |||||||||||||||||||||||| ||||||||||| |||||    
T  14080715 ttcatgcatacaaacatatcatcatagttggagcacgaattt 14080756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 2449184 - 2449152
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    |||||||||||||||||||||||||||||||||    
T  2449184 atgattatgataaagactaacccccttacctta 2449152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 195
Target Start/End: Original strand, 16261777 - 16261809
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    |||||||||||||||||||||||||||||||||    
T  16261777 atgattatgataaagactaacccccttacctta 16261809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 16933901 - 16933869
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    |||||||||||||||||||||||||||||||||    
T  16933901 atgattatgataaagactaacccccttacctta 16933869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 17912430 - 17912398
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    |||||||||||||||||||||||||||||||||    
T  17912430 atgattatgataaagactaacccccttacctta 17912398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 195
Target Start/End: Original strand, 23492696 - 23492728
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    |||||||||||||||||||||||||||||||||    
T  23492696 atgattatgataaagactaacccccttacctta 23492728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 195
Target Start/End: Original strand, 38168237 - 38168269
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    |||||||||||||||||||||||||||||||||    
T  38168237 atgattatgataaagactaacccccttacctta 38168269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 41270219 - 41270327
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcaca 100  Q
    |||||| |||||| | ||||| | |||||| |||   |||||||||||||||  ||  ||||||||||||||||||||||| ||||| ||   ||||||     
T  41270219 taacttatcatttttgcatatatgaacatgtaattccaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacg 41270318  T
Q  101 aatttagca 109  Q
    |||||||||    
T  41270319 aatttagca 41270327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 195
Target Start/End: Original strand, 53771365 - 53771397
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    |||||||||||||||||||||||||||||||||    
T  53771365 atgattatgataaagactaacccccttacctta 53771397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 229
Target Start/End: Original strand, 17205019 - 17205069
Alignment:
Q  179 ctaacccccttaccttaattatctccaactactagctctagcttcacttta 229  Q
    ||||||||||||||||||||||| |||| | ||||| | ||||||||||||    
T  17205019 ctaacccccttaccttaattatcaccaattcctagcccaagcttcacttta 17205069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 38810941 - 38810875
Alignment:
Q  163 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttta 229  Q
    ||||||||||| ||  ||||||||||||||||| ||||| |||| | ||||| | ||||||||||||    
T  38810941 atgattatgatgaattctaacccccttaccttagttatcaccaattcctagcccaagcttcacttta 38810875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 229
Target Start/End: Original strand, 15550922 - 15550987
Alignment:
Q  164 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttta 229  Q
    |||||||||| ||  |||||||||||| |||||||||| |||| | ||||| | ||||||||||||    
T  15550922 tgattatgatgaattctaacccccttatcttaattatcaccaattcctagcccaagcttcacttta 15550987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 11986112 - 11986080
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    ||||||||||| |||||||||||||||||||||    
T  11986112 atgattatgatgaagactaacccccttacctta 11986080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 229
Target Start/End: Original strand, 12031849 - 12031897
Alignment:
Q  181 aacccccttaccttaattatctccaactactagctctagcttcacttta 229  Q
    ||||||||||||||||||||| |||| | ||||| | ||||||||||||    
T  12031849 aacccccttaccttaattatcaccaattcctagcccaagcttcacttta 12031897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 13954836 - 13954804
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    ||||||||| |||||||||||||||||||||||    
T  13954836 atgattatggtaaagactaacccccttacctta 13954804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 195
Target Start/End: Original strand, 14285289 - 14285321
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    ||||||||||| |||||||||||||||||||||    
T  14285289 atgattatgatgaagactaacccccttacctta 14285321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 195
Target Start/End: Original strand, 19947026 - 19947058
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    ||||||||||| |||||||||||||||||||||    
T  19947026 atgattatgatgaagactaacccccttacctta 19947058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 195
Target Start/End: Original strand, 30153265 - 30153297
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    |||||||||||||| ||||||||||||||||||    
T  30153265 atgattatgataaaaactaacccccttacctta 30153297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 195
Target Start/End: Original strand, 33342204 - 33342236
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    ||||||||||||||||||||||| |||||||||    
T  33342204 atgattatgataaagactaaccctcttacctta 33342236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 195
Target Start/End: Original strand, 45861122 - 45861154
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    ||||||||| |||||||||||||||||||||||    
T  45861122 atgattatggtaaagactaacccccttacctta 45861154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 51961063 - 51961031
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    ||||||||||| |||||||||||||||||||||    
T  51961063 atgattatgatgaagactaacccccttacctta 51961031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 176; Significance: 6e-95; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 2 - 229
Target Start/End: Original strand, 41394366 - 41394593
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 101  Q
    ||||| |||||| ||||||||| |||||| ||  | ||||||||||||||| |||| ||||||| ||||||||||||||||||||| ||||||||||| |    
T  41394366 aacttatcatttttacatatttgaacatgtaacttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcatcatagttggagcacga 41394465  T
Q  102 atttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaattatc 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41394466 atttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaattatc 41394565  T
Q  202 tccaactactagctctagcttcacttta 229  Q
    |||||||| |||||||||||||||||||    
T  41394566 tccaactattagctctagcttcacttta 41394593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 20913173 - 20913367
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcaca 100  Q
    |||||| |||||| ||||||| | |||||| ||| | |||||||||| |||| |||| ||||||||||||||||||||||||||||| |||||||||||     
T  20913173 taacttatcatttttacatatatgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacg 20913272  T
Q  101 aatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 195  Q
    |||||||||||||| |||| ||| |||||||||||||||| |||||||||| |||||||| |||||||| |||||||||||||||||||||||||    
T  20913273 aatttagcaacaattatccgtaagcaaaattcatacaacaattgaaaatttgcaaaatgaggatgattacgataaagactaacccccttacctta 20913367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 20931488 - 20931682
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcaca 100  Q
    |||||| |||||| ||||||| | |||||| ||| | |||||||||| |||| |||| ||||||||||||||||||||||||||||| |||||||||||     
T  20931488 taacttatcatttttacatatatgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacg 20931587  T
Q  101 aatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 195  Q
    |||||||||||||| |||||||| |||| ||||||||||| |||||||||| |||||||| |||||||||||||||| |||||||||||||||||    
T  20931588 aatttagcaacaattatccataagcaaacttcatacaacaattgaaaatttgcaaaatgaggatgattatgataaaggctaacccccttacctta 20931682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 25 - 195
Target Start/End: Complemental strand, 37844546 - 37844374
Alignment:
Q  25 aacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaatcatccataat 124  Q
    |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||  |||||||||||||| |||||| ||    
T  37844546 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcatagttggagcatgaatttagcaacaattatccattat 37844447  T
Q  125 c--aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 195  Q
       ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  37844446 gcaaaaattcatacaacatttgaaaattcacaaaatgatgatgattatgataaagactaacccccttacctta 37844374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 25 - 195
Target Start/End: Original strand, 20445846 - 20446019
Alignment:
Q  25 aacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaatcatccataat 124  Q
    |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| | ||||||||| |||||||||||||| |||||| ||    
T  20445846 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacaattggagcacgaatttagcaacaattatccattat 20445945  T
Q  125 --caaaattcatacaacatttgaaaattt-acaaaatgatgatgattatgataaagactaacccccttacctta 195  Q
       |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  20445946 gcaaaaattcatacaacatttgaaaatttcacaaaatgatgatgattatgataaagactaactcccttacctta 20446019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 2 - 195
Target Start/End: Complemental strand, 20893745 - 20893551
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 101  Q
    ||||| |||||| | | ||||| |||||| ||| | | ||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||  |    
T  20893745 aacttatcatttgttcctatttgaacatgtaatttcaacaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcaaga 20893646  T
Q  102 atttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 195  Q
    ||||||||||||| |||||| ||   ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  20893645 atttagcaacaattatccattatgcaaaaattcatacaacatttgaaaa-ttacaaaatgatgatgattatgatgaagactaacccccttacctta 20893551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 25 - 195
Target Start/End: Original strand, 20531611 - 20531783
Alignment:
Q  25 aacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaatcatccataat 124  Q
    |||||| ||| | ||||||||||||||| |||| |||||||||||||||||||||||| |||| | ||||||||| |||||||||||||| |||||| ||    
T  20531611 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatattatcacatttggagcacgaatttagcaacaattatccattat 20531710  T
Q  125 --caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 195  Q
       ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||   ||||||||||    
T  20531711 gcaaaaattcatacaacatttgaaaattcacaaaatgatgatgattatgataaagactaatttccttacctta 20531783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 51452635 - 51452755
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcaca 100  Q
    |||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||     
T  51452635 taacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttgaagcacg 51452734  T
Q  101 aatttagcaacaatcatccat 121  Q
    |||||||||||||| ||||||    
T  51452735 aatttagcaacaattatccat 51452755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 163 - 228
Target Start/End: Original strand, 21860334 - 21860399
Alignment:
Q  163 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttt 228  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  21860334 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttt 21860399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 163 - 228
Target Start/End: Complemental strand, 44034903 - 44034838
Alignment:
Q  163 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttt 228  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  44034903 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttt 44034838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 2 - 87
Target Start/End: Original strand, 2116399 - 2116484
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 87  Q
    ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||| |||||    
T  2116399 aacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatca 2116484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 196
Target Start/End: Original strand, 45051567 - 45051759
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 101  Q
    ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||||||||| || ||||| |||  || ||| |    
T  45051567 aacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacgtaacatcacagtaagaacacga 45051666  T
Q  102 atttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaa 196  Q
    || |||||  |||  | ||| || | |  ||||||||||||  |||||  | |||||| |  ||||||||||||||||||||||||||||||||||    
T  45051667 atctagcatgaattgttcatcaacccattttcatacaacatgagaaaa--tgcaaaatca-catgattatgataaagactaacccccttaccttaa 45051759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 129 - 229
Target Start/End: Original strand, 27675086 - 27675184
Alignment:
Q  129 attcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttt 228  Q
    |||||||||||| |||||||||||||  |  |  | ||||||||||||  |||||||||||||||||||||||||||| | ||||| | |||||||||||    
T  27675086 attcatacaacaattgaaaatttacactaaaa--acgattatgataaattctaacccccttaccttaattatctccaattcctagcccaagcttcacttt 27675183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 163 - 228
Target Start/End: Original strand, 41218728 - 41218793
Alignment:
Q  163 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttt 228  Q
    ||||| ||||| || |||||||||||||||||||||||| ||||||| |||||| |||||||||||    
T  41218728 atgatcatgatgaaaactaacccccttaccttaattatcaccaactattagctcaagcttcacttt 41218793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 18601226 - 18601140
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 87  Q
    |||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||||||||||| |||||    
T  18601226 taacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatca 18601140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 22227952 - 22228022
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgca 71  Q
    |||||| |||||| ||||||||| |||||| ||| | || |||||||||||| |||| |||||||||||||    
T  22227952 taacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaattcatgca 22228022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 22232649 - 22232719
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgca 71  Q
    |||||| |||||| ||||||||| |||||| ||| | || |||||||||||| |||| |||||||||||||    
T  22232649 taacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaattcatgca 22232719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 5072496 - 5072388
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcaca 100  Q
    |||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||| ||||||| ||||| ||   ||||||     
T  5072496 taacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatataaacataacatcacagcaagagcacg 5072397  T
Q  101 aatttagca 109  Q
    |||||||||    
T  5072396 aatttagca 5072388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 194
Target Start/End: Complemental strand, 15861358 - 15861327
Alignment:
Q  163 atgattatgataaagactaacccccttacctt 194  Q
    ||||||||||||||||||||||||||||||||    
T  15861358 atgattatgataaagactaacccccttacctt 15861327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 195
Target Start/End: Original strand, 51452809 - 51452841
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    ||||||| |||||||||||||||||||||||||    
T  51452809 atgattaagataaagactaacccccttacctta 51452841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 146; Significance: 5e-77; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 8 - 228
Target Start/End: Complemental strand, 20627426 - 20627205
Alignment:
Q  8 tcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttag 107  Q
    |||||| |||||||||  ||||| ||| | ||||||||||||||| |||| |||||||| |||||||||||||||||||| ||||||||||| ||||||     
T  20627426 tcatttttacatatttggacatgtaatttcaccaacaatcatacaattatcatcaattcgtgcatacaaacatatcatcacagttggagcacgaatttaa 20627327  T
Q  108 caacaatcatccataatcaaaattcatacaacatttgaaaa-tttacaaaatgatgatgattatgataaagactaacccccttaccttaattatctccaa 206  Q
    ||||||| ||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  20627326 caacaattatccataatcataattcatacaatatttgaaaattttacaaaatgatgatgattatgataaagactaaccccgttaccttaattatctccaa 20627227  T
Q  207 ctactagctctagcttcacttt 228  Q
    ||| ||||||||||||||||||    
T  20627226 ctattagctctagcttcacttt 20627205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 2 - 195
Target Start/End: Original strand, 462882 - 463075
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 101  Q
    ||||| |||||| ||||||||| |||||| ||| | |||||||||| |||| |||| ||||||||||||||||||| ||||||||| ||||||||||| |    
T  462882 aacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaatatatcatcacagttggagcacga 462981  T
Q  102 atttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 195  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  462982 atttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 463075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 19 - 228
Target Start/End: Complemental strand, 43643059 - 43642848
Alignment:
Q  19 tatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaatcatc 118  Q
    ||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||    
T  43643059 tatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacaattggagcacaaatttagcaacaattatc 43642960  T
Q  119 cataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctc 216  Q
    ||  ||   ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||    
T  43642959 cactatgcaaaaattcatacaacatttgaaaattcacaaaatgatgatgattatgataaagactaacctccttcccttaattatctccaactattagctc 43642860  T
Q  217 tagcttcacttt 228  Q
    ||||||||||||    
T  43642859 tagcttcacttt 43642848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 2 - 228
Target Start/End: Complemental strand, 19794823 - 19794596
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 101  Q
    ||||| |||||| | | ||||| |||||| ||| | ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| |    
T  19794823 aacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcacagttggagcacga 19794724  T
Q  102 atttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaatta 199  Q
    ||||| | ||||| |||||| ||   |||||||||||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  19794723 atttaacgacaattatccattatgcaaaaattcatacaacatttgaaa-tttacaaaataatgatgattatgatgaagactaacccccttaccttaatta 19794625  T
Q  200 tctccaactactagctctagcttcacttt 228  Q
    |||||||||| ||||||||||||||||||    
T  19794624 tctccaactattagctctagcttcacttt 19794596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 2 - 195
Target Start/End: Complemental strand, 36982560 - 36982364
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 101  Q
    ||||| |||||| ||||||||| |||||| ||| | |||| ||||| |||| |||| ||||||||||| ||||||||||||||||| ||||||||||| |    
T  36982560 aacttatcatttttacatatttgaacatgtaatttcaccagcaatcttacaattatcatcaattcatgaatacaaacatatcatcacagttggagcacga 36982461  T
Q  102 atttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttac-aaaatgatgatgattatgataaagactaacccccttacctta 195  Q
    ||||||||||||| |||||| ||   |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  36982460 atttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaaatgatgatgattatgataaagactaacccccttacctta 36982364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 2 - 195
Target Start/End: Original strand, 8891386 - 8891581
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 101  Q
    ||||| |||||| | | ||||| |||||| ||| |  |||||||||||||| |||| |||||||||||||||||||||||| |||| ||||||||||| |    
T  8891386 aacttatcatttgttcctatttgaacatgtaatttcgccaacaatcatacaattatcatcaattcatgcatacaaacatattatcacagttggagcacga 8891485  T
Q  102 atttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 195  Q
    ||||||||||||| |||||| ||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  8891486 atttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccctttacctta 8891581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 19689521 - 19689401
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcaca 100  Q
    |||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||     
T  19689521 taacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacg 19689422  T
Q  101 aatttagcaacaatcatccat 121  Q
    |||||||||||||| ||||||    
T  19689421 aatttagcaacaattatccat 19689401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 23820214 - 23820334
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcaca 100  Q
    |||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||     
T  23820214 taacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacg 23820313  T
Q  101 aatttagcaacaatcatccat 121  Q
    |||||||||||||| ||||||    
T  23820314 aatttagcaacaattatccat 23820334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 14906560 - 14906440
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcaca 100  Q
    |||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||     
T  14906560 taacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacg 14906461  T
Q  101 aatttagcaacaatcatccat 121  Q
    |||||||||||||| ||||||    
T  14906460 aatttagcaacaattatccat 14906440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 2 - 195
Target Start/End: Complemental strand, 24341508 - 24341309
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 101  Q
    |||||| ||||| |||||| || |||||  ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||| ||||  |    
T  24341508 aacttcacatttttacataattgaacatataatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttgaagcatga 24341409  T
Q  102 atttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatgataaagactaacccccttacctta 195  Q
    ||||||||||||| |||||  ||   ||||||||||| ||||||||||| || ||||    ||||||||||||||||| |||||||||||||||||||||    
T  24341408 atttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgcaaaaatgatgatgatgattatgatgaagactaacccccttacctta 24341309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 20015154 - 20015274
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcaca 100  Q
    |||||| ||||||  ||||||| ||||||| ||| ||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||     
T  20015154 taacttttcattttcacatattcaaacatgtaatttaaccaacaatcacacaattattatcaattcatgcatgcaaacatatcatcaaagttggagcacg 20015253  T
Q  101 aatttagcaacaatcatccat 121  Q
    |||||||||||||| ||||||    
T  20015254 aatttagcaacaattatccat 20015274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 101 - 195
Target Start/End: Original strand, 22863171 - 22863267
Alignment:
Q  101 aatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 195  Q
    |||||||||||||| |||||| ||   ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22863171 aatttagcaacaattatccattatgcaaaaattcatacaacaattgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 22863267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 121
Target Start/End: Complemental strand, 25265509 - 25265390
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 101  Q
    |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||| |||||||||| |||||| |    
T  25265509 aacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcaaagttagagcacga 25265410  T
Q  102 atttagcaacaatcatccat 121  Q
    ||||||||||||| ||||||    
T  25265409 atttagcaacaattatccat 25265390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 17396772 - 17396653
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcaca 100  Q
    |||||| |||||| ||| |||||||||||| ||| | ||||||||||||||| | || | |||||||||||||||| ||||||||||||||||||||||     
T  17396772 taacttatcatttttacttatttaaacatgtaatttcaccaacaatcatacaatcatcaacaattcatgcatacaa-catatcatcaaagttggagcacg 17396674  T
Q  101 aatttagcaacaatcatccat 121  Q
    |||||||||||||| ||||||    
T  17396673 aatttagcaacaattatccat 17396653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 163 - 228
Target Start/End: Original strand, 22275045 - 22275110
Alignment:
Q  163 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttt 228  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  22275045 atgattatgataaaggctaacccccttaccttaattatctccaactattagctctagcttcacttt 22275110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 163 - 228
Target Start/End: Original strand, 22284278 - 22284343
Alignment:
Q  163 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttt 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  22284278 atgattatgataaagactaacccccttaccttaattatctccaactattagctctaacttcacttt 22284343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 164 - 228
Target Start/End: Original strand, 15633538 - 15633602
Alignment:
Q  164 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttt 228  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| || |||||||||||||||    
T  15633538 tgattatgataaagactaacctccttaccttaattatctccaactattaactctagcttcacttt 15633602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 7507964 - 7507894
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgca 71  Q
    |||||| | |||| ||||||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||    
T  7507964 taacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 7507894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 196
Target Start/End: Complemental strand, 19689347 - 19689314
Alignment:
Q  163 atgattatgataaagactaacccccttaccttaa 196  Q
    ||||||||||||||||||||||||||||||||||    
T  19689347 atgattatgataaagactaacccccttaccttaa 19689314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 9652828 - 9652796
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    |||||||||||||||||||||||||||||||||    
T  9652828 atgattatgataaagactaacccccttacctta 9652796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 14906386 - 14906354
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    |||||||||||||||||||||||||||||||||    
T  14906386 atgattatgataaagactaacccccttacctta 14906354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 195
Target Start/End: Original strand, 23820388 - 23820420
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    |||||||||||||||||||||||||||||||||    
T  23820388 atgattatgataaagactaacccccttacctta 23820420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 194
Target Start/End: Original strand, 25213372 - 25213403
Alignment:
Q  163 atgattatgataaagactaacccccttacctt 194  Q
    ||||||||||||||||||||||||||||||||    
T  25213372 atgattatgataaagactaacccccttacctt 25213403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 229
Target Start/End: Original strand, 43646232 - 43646282
Alignment:
Q  179 ctaacccccttaccttaattatctccaactactagctctagcttcacttta 229  Q
    ||||||||||||||||||||||| |||| | ||||| | ||||||||||||    
T  43646232 ctaacccccttaccttaattatcaccaattcctagcccaagcttcacttta 43646282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 7507789 - 7507757
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    ||||||||||| |||||||||||||||||||||    
T  7507789 atgattatgatgaagactaacccccttacctta 7507757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 17396599 - 17396567
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    ||||||||| |||||||||||||||||||||||    
T  17396599 atgattatggtaaagactaacccccttacctta 17396567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 109
Target Start/End: Complemental strand, 19886745 - 19886661
Alignment:
Q  25 aacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagca 109  Q
    |||||| ||| | ||||||||| |||||  ||  ||||||||||||||||||||||| ||||| ||   |||||| |||||||||    
T  19886745 aacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 19886661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 195
Target Start/End: Original strand, 20015328 - 20015360
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    ||||| |||||||||||||||||||||||||||    
T  20015328 atgatcatgataaagactaacccccttacctta 20015360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 28031166 - 28031134
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    ||||||||||| |||||||||||||||||||||    
T  28031166 atgattatgatgaagactaacccccttacctta 28031134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 195
Target Start/End: Complemental strand, 31146138 - 31146073
Alignment:
Q  129 attcatacaaca-tttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 195  Q
    |||||||||||| |||||||||||||| ||  | |||||||||||| ||  |||||||||||||||||    
T  31146138 attcatacaacaatttgaaaatttacacaa--aagatgattatgatgaattctaacccccttacctta 31146073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 195
Target Start/End: Original strand, 33128372 - 33128404
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    ||||||||||| |||||||||||||||||||||    
T  33128372 atgattatgatgaagactaacccccttacctta 33128404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 142; Significance: 1e-74; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 2 - 195
Target Start/End: Original strand, 122033 - 122226
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 101  Q
    ||||| |||||| ||||||||| |||||| ||| | |||||||||| |||| |||| ||||||||||||||||||||||||||||| |||||||||||||    
T  122033 aacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacaa 122132  T
Q  102 atttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 195  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  122133 atttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaatccccttacctta 122226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 19 - 228
Target Start/End: Complemental strand, 54118346 - 54118135
Alignment:
Q  19 tatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaatcatc 118  Q
    ||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| | ||||||||| |||||||||||||| |||    
T  54118346 tatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacaattggagcacgaatttagcaacaattatc 54118247  T
Q  119 cataatc--aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctc 216  Q
    ||| ||   ||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  54118246 cattatgcaaaaattcatacaacatttgaaaattcacaaaataatgatgattatgatgaagactaacccccttaccttaattatctccaactattagctc 54118147  T
Q  217 tagcttcacttt 228  Q
    ||||||||||||    
T  54118146 tagcttcacttt 54118135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 2 - 195
Target Start/End: Original strand, 13246574 - 13246769
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 101  Q
    ||||| |||||| | | ||||| |||||| ||| | ||||||||||||||| |||| || |||||||||||||||||||||||||| ||||| ||||| |    
T  13246574 aacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcattaattcatgcatacaaacatatcatcacagttgtagcacga 13246673  T
Q  102 atttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 195  Q
    ||||| ||||||| |||||| ||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13246674 atttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 13246769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 2 - 195
Target Start/End: Complemental strand, 15675208 - 15675009
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 101  Q
    |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||| |    
T  15675208 aacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacga 15675109  T
Q  102 atttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatgataaagactaacccccttacctta 195  Q
    ||||||||||||| |||||  ||   ||||||||||| ||||||||||| || ||||    ||||||||||||||||| |||||||||||||||||||||    
T  15675108 atttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgcaaaaatgatgatgatgattatgatgaagactaacccccttacctta 15675009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 26680343 - 26680463
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcaca 100  Q
    |||||| |||||| |||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||     
T  26680343 taacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacg 26680442  T
Q  101 aatttagcaacaatcatccat 121  Q
    |||||||||||||| ||||||    
T  26680443 aatttagcaacaattatccat 26680463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 2 - 195
Target Start/End: Complemental strand, 10104369 - 10104170
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 101  Q
    |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||      
T  10104369 aacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgg 10104270  T
Q  102 atttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatgataaagactaacccccttacctta 195  Q
    ||||||||||||| |||||  ||   ||||||||||| ||||||||||| ||  |||    ||||||||||||||||| |||||||||||||||||||||    
T  10104269 atttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgtaaaaatgatgatgatgattatgatgaagactaacccccttacctta 10104170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 10488705 - 10488825
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcaca 100  Q
    |||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||     
T  10488705 taacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacg 10488804  T
Q  101 aatttagcaacaatcatccat 121  Q
    |||||||||||||| ||||||    
T  10488805 aatttagcaacaattatccat 10488825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 16328046 - 16327926
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcaca 100  Q
    |||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||     
T  16328046 taacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacg 16327947  T
Q  101 aatttagcaacaatcatccat 121  Q
    |||||||||||||| ||||||    
T  16327946 aatttagcaacaattatccat 16327926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 59 - 195
Target Start/End: Original strand, 33240901 - 33241043
Alignment:
Q  59 atcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa 156  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||  ||   ||||||||||| ||||||||||| || ||||    
T  33240901 atcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgcaaa 33241000  T
Q  157 ----atgatgatgattatgataaagactaacccccttacctta 195  Q
        ||||||||||||||||| |||||||||||||||||||||    
T  33241001 aatgatgatgatgattatgatgaagactaacccccttacctta 33241043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 13048341 - 13048221
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcaca 100  Q
    |||||| || ||| |||||||||||||||| ||| | ||||||||||||||| | || ||||| |||||||||||||||||||||  |||||||||||      
T  13048341 taacttatcctttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaaatcatgcatacaaacatatcattgaagttggagcatg 13048242  T
Q  101 aatttagcaacaatcatccat 121  Q
    |||||||||||||| ||||||    
T  13048241 aatttagcaacaattatccat 13048221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 163 - 228
Target Start/End: Complemental strand, 25119139 - 25119074
Alignment:
Q  163 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttt 228  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  25119139 atgattatgataaaaactaactcccttaccttaattatctccaactattagctctagcttcacttt 25119074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 94
Target Start/End: Original strand, 31115773 - 31115865
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttgg 94  Q
    |||||| ||||| |||||| |  |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||    
T  31115773 aacttcacatttttacataatggaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttgg 31115865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 89 - 195
Target Start/End: Original strand, 31132545 - 31132657
Alignment:
Q  89 agttggagcacaaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatgataaagactaa 182  Q
    ||||||||||| |||||||||||||| |||||  ||   ||||||||||| ||||||||||| || ||||    |||||||| |||||||| ||||||||    
T  31132545 agttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgcaaaaatgatgatgataattatgatgaagactaa 31132644  T
Q  183 cccccttacctta 195  Q
    |||||||||||||    
T  31132645 cccccttacctta 31132657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 10644371 - 10644449
Alignment:
Q  9 catttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 87  Q
    ||||| ||||||||| |||||| ||| | || |||||||||||| |||| ||||||||||||||||||||||| |||||    
T  10644371 catttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaattcatgcatacaaacataacatca 10644449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 163 - 228
Target Start/End: Complemental strand, 5682460 - 5682395
Alignment:
Q  163 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttt 228  Q
    |||||||||||||| |||||||| ||||||||||||||| ||||||| ||||||  ||||||||||    
T  5682460 atgattatgataaaaactaacccacttaccttaattatcaccaactattagctcatgcttcacttt 5682395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 195
Target Start/End: Original strand, 14952085 - 14952117
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    |||||||||||||||||||||||||||||||||    
T  14952085 atgattatgataaagactaacccccttacctta 14952117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 15135939 - 15135907
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    |||||||||||||||||||||||||||||||||    
T  15135939 atgattatgataaagactaacccccttacctta 15135907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 15272243 - 15272211
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    |||||||||||||||||||||||||||||||||    
T  15272243 atgattatgataaagactaacccccttacctta 15272211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 16327872 - 16327840
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    |||||||||||||||||||||||||||||||||    
T  16327872 atgattatgataaagactaacccccttacctta 16327840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 16609045 - 16609013
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    |||||||||||||||||||||||||||||||||    
T  16609045 atgattatgataaagactaacccccttacctta 16609013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 195
Target Start/End: Original strand, 26680517 - 26680549
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    |||||||||||||||||||||||||||||||||    
T  26680517 atgattatgataaagactaacccccttacctta 26680549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 41165881 - 41165815
Alignment:
Q  163 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttta 229  Q
    ||||||||||| ||  ||||||||||||| ||||||||| |||| | ||||| | ||||||||||||    
T  41165881 atgattatgatgaattctaacccccttacgttaattatcaccaattcctagcccaagcttcacttta 41165815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 105
Target Start/End: Complemental strand, 40885667 - 40885570
Alignment:
Q  9 catttctacata-tttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaaattt 105  Q
    ||||| |||||| ||| |||||| ||| | |||||||| ||| || |||| | ||||||||||||||||||||| || || |||||||| || |||||    
T  40885667 catttatacatactttgaacatgtaatttcaccaacaaacattcaattatcaccaattcatgcatacaaacatagcaccacagttggagtacgaattt 40885570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 195
Target Start/End: Original strand, 8045272 - 8045304
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    ||||||||||| |||||||||||||||||||||    
T  8045272 atgattatgatgaagactaacccccttacctta 8045304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 195
Target Start/End: Original strand, 16523146 - 16523178
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    ||||||||||| |||||||||||||||||||||    
T  16523146 atgattatgatgaagactaacccccttacctta 16523178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 47357798 - 47357906
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcaca 100  Q
    |||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  ||  |||||| |||||||||||||||| ||||| ||   ||||||     
T  47357798 taacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaatccatgcatacaaacataacatcacagcaagagcacg 47357897  T
Q  101 aatttagca 109  Q
    |||||||||    
T  47357898 aatttagca 47357906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 139; Significance: 7e-73; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 2 - 195
Target Start/End: Original strand, 1268 - 1462
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 101  Q
    ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| |    
T  1268 aacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattattatcaattcatgcatactaacatatcatcaaagttggagcacga 1367  T
Q  102 atttagcaacaatcatccataatcaaaattcatacaacatttgaaaattt-acaaaatgatgatgattatgataaagactaacccccttacctta 195  Q
    ||||||||||||| ||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  1368 atttagcaacaattatccataagaaaaattcatacaacatttgaaaatttcacaaaatgatgatgattatgataaagactaacccccttacctta 1462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 2 - 195
Target Start/End: Complemental strand, 3701 - 3508
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 101  Q
    ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||| |    
T  3701 aacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacga 3602  T
Q  102 atttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 195  Q
    ||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  3601 atttagcaacaattatctataatcaaaattcatacaacttttgaaaatttacaaaatgaagatgattatgacaaagactaacccccttacctta 3508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 138; Significance: 3e-72; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 2 - 195
Target Start/End: Original strand, 48742 - 48935
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 101  Q
    ||||| |||||| | | ||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||| |    
T  48742 aacttatcattttttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacga 48841  T
Q  102 atttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 195  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48842 atttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 48935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 61154 - 61122
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    ||||||||||| |||||||||||||||||||||    
T  61154 atgattatgatgaagactaacccccttacctta 61122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 137; Significance: 1e-71; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 8 - 228
Target Start/End: Original strand, 3060116 - 3060336
Alignment:
Q  8 tcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttag 107  Q
    |||||| ||||||||| |||||| ||| | ||||||| |  |||| |||| ||||||| ||||||||||| |||| |||| ||||||||||| |||||||    
T  3060116 tcatttttacatatttgaacatgtaatttcaccaacagtattacaattatcatcaattaatgcatacaaatatattatcacagttggagcacgaatttag 3060215  T
Q  108 caacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaattatctccaac 207  Q
    ||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  3060216 caacaattatccataagcaaaattcatataacatttgaaaatttacaaaatgatgatgattatgataaagacttacccccttaccttcattatctccaac 3060315  T
Q  208 tactagctctagcttcacttt 228  Q
    || ||||||||||||||||||    
T  3060316 tattagctctagcttcacttt 3060336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 2 - 195
Target Start/End: Original strand, 16211910 - 16212103
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 101  Q
    ||||| |||||| ||||||||| |||||| ||| | || ||||||| |||| |||| ||||||||||||||||||||||||||||| ||||||||||| |    
T  16211910 aacttatcatttttacatatttgaacatgcaatttcacaaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacga 16212009  T
Q  102 atttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 195  Q
    |||||||||||||  ||||||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  16212010 atttagcaacaattgtccataagcaaaattcatacaacatttgaaatttcacaaaatgatgatgattatgataaagactaacccccttacctta 16212103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 2 - 195
Target Start/End: Complemental strand, 13037133 - 13036938
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 101  Q
    ||||| |||||| | | ||||| |||||| ||| | | ||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||| |    
T  13037133 aacttatcatttgttcctatttgaacatgcaatttcatcaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacga 13037034  T
Q  102 atttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 195  Q
    ||||||||||||| |||||| ||   |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  13037033 atttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgattatggtgaagactaacccccttacctta 13036938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 2 - 195
Target Start/End: Original strand, 36052808 - 36053003
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 101  Q
    ||||| |||||| ||||||||| |||||| ||| | ||||||||||||| | |||| |||||||||||||||||||| |||||||| |||||||| | ||    
T  36052808 aacttatcatttttacatatttgaacatgtaattttaccaacaatcatataattatcatcaattcatgcatacaaacgtatcatcacagttggagtataa 36052907  T
Q  102 atttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 195  Q
    ||||||||||||| |||||| ||   |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  36052908 atttagcaacaattatccattatacaaaaattcatacaacatttgaaatttcacaaaatgatgatgattatgataaagactaacccccttacctta 36053003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 2 - 195
Target Start/End: Complemental strand, 11580858 - 11580661
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 101  Q
    ||||| |||||| | | ||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||||||||||||| |||| ||||||||||| |    
T  11580858 aacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatattatcacagttggagcacga 11580759  T
Q  102 atttagcaacaatcatccataat---caaaattcatacaacatttgaaaatttac-aaaatgatgatgattatgataaagactaacccccttacctta 195  Q
    ||||||||| ||| |||||| ||    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  11580758 atttagcaataattatccattatgcaaaaaattcatacaacatttgaaaatttacaaaaatgatgatgattatgataaagactaatccccttacctta 11580661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 11516370 - 11516490
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcaca 100  Q
    |||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||     
T  11516370 taacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacg 11516469  T
Q  101 aatttagcaacaatcatccat 121  Q
    |||||||||||||| ||||||    
T  11516470 aatttagcaacaattatccat 11516490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 15441684 - 15441564
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcaca 100  Q
    |||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||     
T  15441684 taacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacg 15441585  T
Q  101 aatttagcaacaatcatccat 121  Q
    |||||||||||||| ||||||    
T  15441584 aatttagcaacaattatccat 15441564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 30262249 - 30262129
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcaca 100  Q
    |||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||     
T  30262249 taacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacg 30262150  T
Q  101 aatttagcaacaatcatccat 121  Q
    |||||||||||||| ||||||    
T  30262149 aatttagcaacaattatccat 30262129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 7293159 - 7293279
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcaca 100  Q
    |||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||     
T  7293159 taacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattattaattcatgcatacaaacatatcatcaaagttggagcacg 7293258  T
Q  101 aatttagcaacaatcatccat 121  Q
    |||||||||||||| ||||||    
T  7293259 aatttagcaacaattatccat 7293279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 15 - 121
Target Start/End: Complemental strand, 25292444 - 25292338
Alignment:
Q  15 tacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaat 114  Q
    |||||||||||||||| ||| | ||||||||||||||| | || | |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  25292444 tacatatttaaacatgtaatttcaccaacaatcatacaatcatcaacaattcatacatacaaacatatcatcaaagttggagcacaaatttagcaacaat 25292345  T
Q  115 catccat 121  Q
     ||||||    
T  25292344 tatccat 25292338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 2 - 121
Target Start/End: Complemental strand, 47481150 - 47481031
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 101  Q
    ||||| |||||| ||||||||| |||||| ||| | || |||||||||||| |||| ||||||||||||||||||||||| ||||| |||| |||||| |    
T  47481150 aacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagttagagcacga 47481051  T
Q  102 atttagcaacaatcatccat 121  Q
    ||||||||||||| ||||||    
T  47481050 atttagcaacaattatccat 47481031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 2 - 114
Target Start/End: Complemental strand, 18253954 - 18253842
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 101  Q
    ||||| |||||| |||| |||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||| | ||||||||||| |    
T  18253954 aacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattacagttggagcacga 18253855  T
Q  102 atttagcaacaat 114  Q
    |||||| ||||||    
T  18253854 atttagtaacaat 18253842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 163 - 228
Target Start/End: Complemental strand, 32493978 - 32493913
Alignment:
Q  163 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttt 228  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  32493978 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttt 32493913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 24 - 120
Target Start/End: Original strand, 13321182 - 13321278
Alignment:
Q  24 aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaatcatcca 120  Q
    ||||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||| ||||| |||| |||||| |||||||||||||| |||||    
T  13321182 aaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagcaacaattatcca 13321278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 163 - 224
Target Start/End: Original strand, 126738 - 126799
Alignment:
Q  163 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttca 224  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||    
T  126738 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctaacttca 126799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 163 - 228
Target Start/End: Complemental strand, 1936949 - 1936884
Alignment:
Q  163 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttt 228  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||| || |||||||||||||||    
T  1936949 atgattatgataaaaactaacctccttaccttaattatctccaactattaactctagcttcacttt 1936884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 86
Target Start/End: Complemental strand, 16479069 - 16478985
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatc 86  Q
    ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||| ||||    
T  16479069 aacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatc 16478985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 13572820 - 13572906
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 87  Q
    |||||| |||||| |||||||||||||||| ||| | ||||||||||| ||| | || ||||||||||||||||||||||| |||||    
T  13572820 taacttatcatttttacatatttaaacatgtaatttcaccaacaatcacacaatcatcatcaattcatgcatacaaacataacatca 13572906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 296086 - 295893
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcaca 100  Q
    ||||||||||||| |||||| || |||||| ||| | |||||||||||||   |||| ||| ||||||||| ||||||||| || |  | || || |||     
T  296086 taacttctcatttttacataattcaacatgaaatttcaccaacaatcataacattatcatcgattcatgcacacaaacataacacctcaattagaacacg 295987  T
Q  101 aatttagcaacaatcatccataat-caaaa-ttcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacct 193  Q
    |||||||||||||| || ||| || ||||| |||||||||  |||||||||  | ||||||||||  |||||| | ||||| |||||||||||||    
T  295986 aatttagcaacaattattcattatgcaaaatttcatacaaagtttgaaaatgca-aaaatgatgagaattatgttgaagacaaacccccttacct 295893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 163 - 228
Target Start/End: Complemental strand, 111201 - 111136
Alignment:
Q  163 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttt 228  Q
    ||||||||||| || |||||||||||||||||||||||| ||||||  |||||| |||||||||||    
T  111201 atgattatgatgaaaactaacccccttaccttaattatcaccaacttttagctcaagcttcacttt 111136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 13911132 - 13911046
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 87  Q
    |||||| |||||| | ||||| | |||||| ||| | ||||||||||||||| |||  ||||||||||||||||||||||| |||||    
T  13911132 taacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaattaacatcaattcatgcatacaaacataacatca 13911046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 229
Target Start/End: Original strand, 13377819 - 13377917
Alignment:
Q  129 attcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttt 228  Q
    |||||||||||| |||||||||||||  |  |  ||||||||||| ||  ||||||||||||||||||||||| |||| | ||||| | |||||||||||    
T  13377819 attcatacaacaattgaaaatttacactaaaa--atgattatgatgaattctaacccccttaccttaattatcaccaattcctagcccaagcttcacttt 13377916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 164 - 228
Target Start/End: Complemental strand, 7283987 - 7283923
Alignment:
Q  164 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttt 228  Q
    |||||||||| || |||||||||||||||||||||||| |||| || || ||| |||||||||||    
T  7283987 tgattatgatgaaaactaacccccttaccttaattatcaccaattattaactcaagcttcacttt 7283923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 10989553 - 10989661
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcaca 100  Q
    |||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||||||||||| ||||| ||   ||||||     
T  10989553 taacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacg 10989652  T
Q  101 aatttagca 109  Q
    |||||||||    
T  10989653 aatttagca 10989661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 2437601 - 2437687
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 87  Q
    |||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||||||||||| |||||    
T  2437601 taacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatca 2437687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 79 - 121
Target Start/End: Complemental strand, 14114031 - 14113989
Alignment:
Q  79 atatcatcaaagttggagcacaaatttagcaacaatcatccat 121  Q
    ||||||||||||||||||||| |||||||||||||| ||||||    
T  14114031 atatcatcaaagttggagcacgaatttagcaacaattatccat 14113989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 79 - 121
Target Start/End: Complemental strand, 14423681 - 14423639
Alignment:
Q  79 atatcatcaaagttggagcacaaatttagcaacaatcatccat 121  Q
    ||||||||||||||||||||| |||||||||||||| ||||||    
T  14423681 atatcatcaaagttggagcacgaatttagcaacaattatccat 14423639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 195
Target Start/End: Original strand, 2029244 - 2029276
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    |||||||||||||||||||||||||||||||||    
T  2029244 atgattatgataaagactaacccccttacctta 2029276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 195
Target Start/End: Original strand, 7293333 - 7293365
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    |||||||||||||||||||||||||||||||||    
T  7293333 atgattatgataaagactaacccccttacctta 7293365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 195
Target Start/End: Original strand, 11516544 - 11516576
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    |||||||||||||||||||||||||||||||||    
T  11516544 atgattatgataaagactaacccccttacctta 11516576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 14113935 - 14113903
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    |||||||||||||||||||||||||||||||||    
T  14113935 atgattatgataaagactaacccccttacctta 14113903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 15441510 - 15441478
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    |||||||||||||||||||||||||||||||||    
T  15441510 atgattatgataaagactaacccccttacctta 15441478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 195
Target Start/End: Original strand, 15709428 - 15709501
Alignment:
Q  126 aaaattcatacaacatttgaaaatttacaaaat----gatgatgattatgataaagactaacccccttacctta 195  Q
    ||||||||||| ||||||||||| || ||||||    ||||||||||||||| |||||||| || |||||||||    
T  15709428 aaaattcataccacatttgaaaaattgcaaaattgatgatgatgattatgatgaagactaatcctcttacctta 15709501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 30262075 - 30262043
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    |||||||||||||||||||||||||||||||||    
T  30262075 atgattatgataaagactaacccccttacctta 30262043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 42056220 - 42056188
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    |||||||||||||||||||||||||||||||||    
T  42056220 atgattatgataaagactaacccccttacctta 42056188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 229
Target Start/End: Original strand, 13389693 - 13389743
Alignment:
Q  179 ctaacccccttaccttaattatctccaactactagctctagcttcacttta 229  Q
    ||||||||||||||||||||||| |||| | ||||| | ||||||||||||    
T  13389693 ctaacccccttaccttaattatcaccaattcctagcccaagcttcacttta 13389743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 195
Target Start/End: Original strand, 371417 - 371449
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    ||||||||||| |||||||||||||||||||||    
T  371417 atgattatgatgaagactaacccccttacctta 371449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 195
Target Start/End: Original strand, 3049905 - 3049937
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    |||||||||||||| ||||||||||||||||||    
T  3049905 atgattatgataaaaactaacccccttacctta 3049937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 195
Target Start/End: Original strand, 13321334 - 13321366
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    ||||||||||| |||||||||||||||||||||    
T  13321334 atgattatgatgaagactaacccccttacctta 13321366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 191
Target Start/End: Complemental strand, 15516793 - 15516765
Alignment:
Q  163 atgattatgataaagactaacccccttac 191  Q
    |||||||||||||||||||||||||||||    
T  15516793 atgattatgataaagactaacccccttac 15516765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 195
Target Start/End: Original strand, 25124450 - 25124482
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    ||||||||||| |||||||||||||||||||||    
T  25124450 atgattatgatgaagactaacccccttacctta 25124482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 47480976 - 47480944
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    ||||||||||| |||||||||||||||||||||    
T  47480976 atgattatgatgaagactaacccccttacctta 47480944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 133; Significance: 3e-69; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 19 - 228
Target Start/End: Complemental strand, 16405077 - 16404867
Alignment:
Q  19 tatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaatcatc 118  Q
    ||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||| |||    
T  16405077 tatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaataattatc 16404978  T
Q  119 cataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctc 216  Q
    ||| ||   |||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  16404977 catcatgcaaaaattcatacaacatttgaaaatttac-aaataatgatgattatgatgaagactaacccccttaccttaattatctccaactattagctc 16404879  T
Q  217 tagcttcacttt 228  Q
    ||||||||||||    
T  16404878 tagcttcacttt 16404867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 2 - 195
Target Start/End: Complemental strand, 16193835 - 16193643
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 101  Q
    ||||| |||||| ||||||||| |||||| ||| |  |||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||| |    
T  16193835 aacttatcatttttacatatttgaacatgtaatttccccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcatagttggagcacga 16193736  T
Q  102 atttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 195  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  16193735 atttagcaacaatcatccataagcaaaattcatacaatatttgaaaatttaccaaatgatgatgattatgataaagactaa-ccccttacctta 16193643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 2 - 195
Target Start/End: Complemental strand, 24928910 - 24928716
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 101  Q
    ||||| |||||| | | ||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||||||||||||| |||| ||||||||||| |    
T  24928910 aacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatataatcacagttggagcacga 24928811  T
Q  102 atttagcaacaatcatccataatcaaaattcatacaacatttgaaaattt-acaaaatgatgatgattatgataaagactaacccccttacctta 195  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||    
T  24928810 atttagcaacaattatccataatcaaaattcatacaacatttgaaaatttcacaaaatgacgatgattatgataaagactaaccccattacctta 24928716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 2 - 195
Target Start/End: Complemental strand, 43373587 - 43373392
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 101  Q
    ||||| |||||| ||||||||| |||||| ||| | ||||||||||||| | |||| |||||||||||||||||||| |||||||| ||||||||||| |    
T  43373587 aacttatcatttttacatatttgaacatgtaatttcaccaacaatcatataattatcatcaattcatgcatacaaacgtatcatcacagttggagcacga 43373488  T
Q  102 atttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 195  Q
    ||||||||  ||| |||||| ||   |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  43373487 atttagcattaattatccattatacaaaaattcatacaacatttgaaatttcacaaaatgatgatgattatgataaagactaacccccttacctta 43373392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 5238230 - 5238350
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcaca 100  Q
    |||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||     
T  5238230 taacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacg 5238329  T
Q  101 aatttagcaacaatcatccat 121  Q
    |||||||||||||| ||||||    
T  5238330 aatttagcaacaattatccat 5238350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 22907334 - 22907214
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcaca 100  Q
    |||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||     
T  22907334 taacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacg 22907235  T
Q  101 aatttagcaacaatcatccat 121  Q
    |||||||||||||| ||||||    
T  22907234 aatttagcaacaattatccat 22907214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 24661368 - 24661248
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcaca 100  Q
    |||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||     
T  24661368 taacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacg 24661269  T
Q  101 aatttagcaacaatcatccat 121  Q
    |||||||||||||| ||||||    
T  24661268 aatttagcaacaattatccat 24661248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 43685689 - 43685809
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcaca 100  Q
    |||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||     
T  43685689 taacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacg 43685788  T
Q  101 aatttagcaacaatcatccat 121  Q
    |||||||||||||| ||||||    
T  43685789 aatttagcaacaattatccat 43685809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 163 - 228
Target Start/End: Original strand, 274766 - 274831
Alignment:
Q  163 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttt 228  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  274766 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttt 274831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 163 - 228
Target Start/End: Complemental strand, 641083 - 641018
Alignment:
Q  163 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttt 228  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  641083 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttt 641018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 163 - 228
Target Start/End: Complemental strand, 826889 - 826824
Alignment:
Q  163 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttt 228  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  826889 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttt 826824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 163 - 228
Target Start/End: Complemental strand, 24716794 - 24716729
Alignment:
Q  163 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttt 228  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  24716794 atgattatgataaagactaacccccttaccttaattatcaccaactattagctctagcttcacttt 24716729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 17345712 - 17345832
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcaca 100  Q
    ||||||| ||||| |||||| || ||||||  || | ||||||||||||||| |||| ||||||||||||||| ||||||| ||||| |||| ||||||     
T  17345712 taacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatataaacataacatcacagttagagcacg 17345811  T
Q  101 aatttagcaacaatcatccat 121  Q
    ||||| |||||||| ||||||    
T  17345812 aatttcgcaacaattatccat 17345832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 6774365 - 6774258
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 101  Q
    ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||| ||||| |||  |||||| |    
T  6774365 aacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagtaagagcacga 6774266  T
Q  102 atttagca 109  Q
    || |||||    
T  6774265 atctagca 6774258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 109
Target Start/End: Original strand, 24549126 - 24549233
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 101  Q
    ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||| ||||| |||  |||||| |    
T  24549126 aacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagtaagagcacga 24549225  T
Q  102 atttagca 109  Q
    || |||||    
T  24549226 atctagca 24549233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 21844680 - 21844594
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 87  Q
    |||||| |||||| |||||||||||||||| ||| | ||||||||||||||| | || ||||||||||||||||||||||| |||||    
T  21844680 taacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatca 21844594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 21852073 - 21851987
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 87  Q
    |||||| |||||| |||||||||||||||  ||| | ||||||||||||||| | || ||||||||||||||||||||||| |||||    
T  21852073 taacttatcatttttacatatttaaacatttaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatca 21851987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 228
Target Start/End: Original strand, 39115598 - 39115663
Alignment:
Q  163 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttt 228  Q
    ||||||||||| || |||||| ||||||||||||||||  ||||||| |||||| |||||||||||    
T  39115598 atgattatgatgaaaactaacacccttaccttaattattaccaactattagctcaagcttcacttt 39115663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 105
Target Start/End: Complemental strand, 23226117 - 23226076
Alignment:
Q  64 ttcatgcatacaaacatatcatcaaagttggagcacaaattt 105  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  23226117 ttcatgcatacaaacatatcatcatagttagagcacaaattt 23226076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 195
Target Start/End: Original strand, 5238404 - 5238436
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    |||||||||||||||||||||||||||||||||    
T  5238404 atgattatgataaagactaacccccttacctta 5238436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 22907160 - 22907128
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    |||||||||||||||||||||||||||||||||    
T  22907160 atgattatgataaagactaacccccttacctta 22907128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 24385684 - 24385652
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    |||||||||||||||||||||||||||||||||    
T  24385684 atgattatgataaagactaacccccttacctta 24385652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 24661194 - 24661162
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    |||||||||||||||||||||||||||||||||    
T  24661194 atgattatgataaagactaacccccttacctta 24661162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 30120866 - 30120974
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcaca 100  Q
    |||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  || |||||||||||||||||||| ||||| ||   ||||||     
T  30120866 taacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacataaattcatgcatacaaacataacatcacagcaagagcacg 30120965  T
Q  101 aatttagca 109  Q
    |||||||||    
T  30120966 aatttagca 30120974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 195
Target Start/End: Original strand, 43685863 - 43685895
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    |||||||||||||||||||||||||||||||||    
T  43685863 atgattatgataaagactaacccccttacctta 43685895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 195
Target Start/End: Original strand, 2545265 - 2545297
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    ||||||||||| |||||||||||||||||||||    
T  2545265 atgattatgatgaagactaacccccttacctta 2545297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 3431208 - 3431176
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    ||||||||||| |||||||||||||||||||||    
T  3431208 atgattatgatgaagactaacccccttacctta 3431176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 16674500 - 16674392
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcaca 100  Q
    |||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  || |||||||||||| ||||||| ||||| ||   ||||||     
T  16674500 taacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacataaattcatgcataaaaacataacatcacagaaagagcacg 16674401  T
Q  101 aatttagca 109  Q
    |||||||||    
T  16674400 aatttagca 16674392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 195
Target Start/End: Original strand, 22886654 - 22886686
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    ||||||||||| |||||||||||||||||||||    
T  22886654 atgattatgattaagactaacccccttacctta 22886686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 124; Significance: 6e-64; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 8 - 195
Target Start/End: Original strand, 41879 - 42066
Alignment:
Q  8 tcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttag 107  Q
    |||||| ||||||||| | |||| ||| | |||||||||   ||| |||| ||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  41879 tcatttttacatatttgagcatgtaatttcaccaacaatatgacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttag 41978  T
Q  108 caacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 195  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  41979 caacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagaccaacccccttacctta 42066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 124; Significance: 6e-64; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 2 - 193
Target Start/End: Complemental strand, 51301 - 51110
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 101  Q
    ||||| |||||| ||| ||||| |||||| ||| | |||||||||| |||| |||| ||||||||||||||||||| ||||||||| ||||||||||| |    
T  51301 aacttatcatttttacctatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaatatatcatcacagttggagcacga 51202  T
Q  102 atttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacct 193  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  51201 atttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaatctccttacct 51110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 10 - 195
Target Start/End: Complemental strand, 6175 - 5990
Alignment:
Q  10 atttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagca 109  Q
    |||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  6175 atttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagca 6076  T
Q  110 acaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 195  Q
    ||||| ||||||||||| |||||||||||||||||| ||||| |||| |||  |||||||||||||||||||||||||||||||||    
T  6075 acaattatccataatcacaattcatacaacatttgagaatttgcaaagtgaaaatgattatgataaagactaacccccttacctta 5990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 10 - 195
Target Start/End: Complemental strand, 1067 - 882
Alignment:
Q  10 atttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagca 109  Q
    |||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  1067 atttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagca 968  T
Q  110 acaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 195  Q
    ||||| ||||||||||| |||||||||||||||||| |||||  ||| ||| ||||||||||||||||||||||||||||||||||    
T  967 acaattatccataatcacaattcatacaacatttgagaatttgtaaagtgaagatgattatgataaagactaacccccttacctta 882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 122; Significance: 1e-62; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 2 - 195
Target Start/End: Original strand, 172049 - 172242
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 101  Q
    ||||| |||||| | | ||||| |||||| ||| | |||| |||||||||| |||| |||||||||| |||||||||||||||||| |||||||||||      
T  172049 aacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcatccatacaaacatatcatcacagttggagcacgt 172148  T
Q  102 atttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 195  Q
    ||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  172149 atttagcaacagttatccataatcaaaatttatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 172242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 2 - 195
Target Start/End: Original strand, 177752 - 177945
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 101  Q
    ||||| |||||| | | ||||| |||||| ||| | |||| |||||||||| |||| |||||||||| |||||||||||||||||| |||||||||||      
T  177752 aacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcatccatacaaacatatcatcacagttggagcacgt 177851  T
Q  102 atttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 195  Q
    ||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  177852 atttagcaacagttatccataatcaaaatttatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 177945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 122; Significance: 1e-62; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 2 - 195
Target Start/End: Original strand, 23507109 - 23507302
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 101  Q
    ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| |  |||||||| |    
T  23507109 aacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacaaatggagcacga 23507208  T
Q  102 atttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 195  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||  ||||||||||  ||||||||||||||||||||||||||||||||||    
T  23507209 atttagcaacaattatccataagcaaaattcatacaacatttgaaatcttacaaaatggagatgattatgataaagactaacccccttacctta 23507302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 2 - 195
Target Start/End: Complemental strand, 27182666 - 27182471
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 101  Q
    ||||| |||||| | | ||||| |||||| ||| | | ||||||||||||| |||| |||| |||||||||||||||||||||||| ||||||||||  |    
T  27182666 aacttatcatttgttcctatttgaacatgtaatttcatcaacaatcatacaattatcatcagttcatgcatacaaacatatcatcacagttggagcatga 27182567  T
Q  102 atttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 195  Q
    ||||||||||||| |||||| ||   |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  27182566 atttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgatgaagactaacccccttacctta 27182471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 2 - 195
Target Start/End: Complemental strand, 18531186 - 18530988
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 101  Q
    |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||| |    
T  18531186 aacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacga 18531087  T
Q  102 atttagcaacaatcatcc-ataatcaaa-attcatacaacatttgaaaatttacaaaatgatgat---gattatgataaagactaacccccttacctta 195  Q
    ||||||||||||| |||| || || ||| |||||||| ||||||||||| || ||||||||||||   ||||||||| |||||||||||||||||||||    
T  18531086 atttagcaacaattatccaattatgaaacattcataccacatttgaaaaattgcaaaatgatgatgacgattatgatgaagactaacccccttacctta 18530988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 20623112 - 20623232
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcaca 100  Q
    |||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||     
T  20623112 taacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacg 20623211  T
Q  101 aatttagcaacaatcatccat 121  Q
    |||||||||||||| ||||||    
T  20623212 aatttagcaacaattatccat 20623232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 21233648 - 21233528
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcaca 100  Q
    |||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||     
T  21233648 taacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacg 21233549  T
Q  101 aatttagcaacaatcatccat 121  Q
    |||||||||||||| ||||||    
T  21233548 aatttagcaacaattatccat 21233528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 37052887 - 37053007
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcaca 100  Q
    |||||| ||||||| ||||||| ||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||     
T  37052887 taacttttcatttccacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacg 37052986  T
Q  101 aatttagcaacaatcatccat 121  Q
    |||||||||||||| ||||||    
T  37052987 aatttagcaacaattatccat 37053007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 2 - 195
Target Start/End: Complemental strand, 22053952 - 22053753
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 101  Q
    |||||| ||||| |||||| || |||||| ||| | |||||||||||||||  ||| |||||||||| |||||||||||||||||| ||||||||||| |    
T  22053952 aacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaactatcatcaattcatacatacaaacatatcatcacagttggagcacga 22053853  T
Q  102 atttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatgataaagactaacccccttacctta 195  Q
    ||||||||||||| |||||  ||   ||||||||||| ||||||||||| || ||||    ||||||||||||||||| |||||||||||||||||||||    
T  22053852 atttagcaacaattatccaattatgaaaaattcataccacatttgaaaaatttcaaaaatgatgatgatgattatgatgaagactaacccccttacctta 22053753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 16536340 - 16536460
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcaca 100  Q
    |||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||     
T  16536340 taacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattataaattcatgcatacaaacatatcatcaaagttggagcacg 16536439  T
Q  101 aatttagcaacaatcatccat 121  Q
    |||||||||||||| ||||||    
T  16536440 aatttagcaacaattatccat 16536460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 25900526 - 25900408
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcaca 100  Q
    |||||| ||||||  ||||||| ||||||  ||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||     
T  25900526 taacttttcattttcacatattcaaacatataatttaaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcaaagttggagcacg 25900427  T
Q  101 aatttagcaacaatcatcc 119  Q
    |||||||||||||| ||||    
T  25900426 aatttagcaacaattatcc 25900408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 34939420 - 34939540
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcaca 100  Q
    ||||||| ||||| |||||| || ||||||  || | ||||||||||||||| |||| ||||||||||||||||||||||| ||||| |||| ||||||     
T  34939420 taacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagttagagcacg 34939519  T
Q  101 aatttagcaacaatcatccat 121  Q
    |||||||||||| | ||||||    
T  34939520 aatttagcaacagttatccat 34939540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 29188391 - 29188284
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 101  Q
    ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||| ||||| |||  |||||| |    
T  29188391 aacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagtaagagcacga 29188292  T
Q  102 atttagca 109  Q
    || |||||    
T  29188291 atctagca 29188284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 27009985 - 27010071
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 87  Q
    |||||| |||||| |||||||||||||||| ||| | ||||||| ||||||| | || ||||||||||||||||||||||| |||||    
T  27009985 taacttatcatttttacatatttaaacatgtaatttcaccaacactcatacaatcatcatcaattcatgcatacaaacataacatca 27010071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 164 - 228
Target Start/End: Original strand, 11584374 - 11584438
Alignment:
Q  164 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttt 228  Q
    |||||||||| ||  ||||||||||||||||||||||| ||||||| || ||| |||||||||||    
T  11584374 tgattatgatgaattctaacccccttaccttaattatcaccaactattaactcaagcttcacttt 11584438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 4200093 - 4200007
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 87  Q
    |||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||||||||||| |||||    
T  4200093 taacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatca 4200007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 43443503 - 43443417
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 87  Q
    |||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||||||||||| |||||    
T  43443503 taacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatca 43443417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 195
Target Start/End: Original strand, 16105967 - 16105999
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    |||||||||||||||||||||||||||||||||    
T  16105967 atgattatgataaagactaacccccttacctta 16105999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 19500043 - 19500151
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcaca 100  Q
    |||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  ||  ||||||||||||||||||||||| ||||| ||   ||||||     
T  19500043 taacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacg 19500142  T
Q  101 aatttagca 109  Q
    |||||||||    
T  19500143 aatttagca 19500151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 195
Target Start/End: Original strand, 20623286 - 20623318
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    |||||||||||||||||||||||||||||||||    
T  20623286 atgattatgataaagactaacccccttacctta 20623318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 21233474 - 21233442
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    |||||||||||||||||||||||||||||||||    
T  21233474 atgattatgataaagactaacccccttacctta 21233442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 22366589 - 22366481
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcaca 100  Q
    |||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  ||  ||||||||||||||||||||||| ||||| ||   ||||||     
T  22366589 taacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacg 22366490  T
Q  101 aatttagca 109  Q
    |||||||||    
T  22366489 aatttagca 22366481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 25426772 - 25426880
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcaca 100  Q
    |||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  ||  ||||||||||||||||||||||| ||||| ||   ||||||     
T  25426772 taacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacg 25426871  T
Q  101 aatttagca 109  Q
    |||||||||    
T  25426872 aatttagca 25426880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 25900352 - 25900320
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    |||||||||||||||||||||||||||||||||    
T  25900352 atgattatgataaagactaacccccttacctta 25900320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 195
Target Start/End: Original strand, 37053061 - 37053093
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    |||||||||||||||||||||||||||||||||    
T  37053061 atgattatgataaagactaacccccttacctta 37053093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 18778100 - 18778014
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 87  Q
    |||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  ||  ||||||||||||||||||||||| |||||    
T  18778100 taacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatca 18778014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 109
Target Start/End: Original strand, 12542 - 12626
Alignment:
Q  25 aacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagca 109  Q
    |||||| ||| | ||||||||| |||||  ||  ||||||||||||||||||||||| ||||| ||   |||||| |||||||||    
T  12542 aacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 12626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 108760 - 108728
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    ||||||||||| |||||||||||||||||||||    
T  108760 atgattatgatgaagactaacccccttacctta 108728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 9730310 - 9730278
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    ||||||||||| |||||||||||||||||||||    
T  9730310 atgattatgatgaagactaacccccttacctta 9730278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 195
Target Start/End: Original strand, 16536514 - 16536546
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    |||||||||||||||||||||||||||| ||||    
T  16536514 atgattatgataaagactaacccccttatctta 16536546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 21073703 - 21073595
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcaca 100  Q
    |||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  ||  ||| ||||||||||||||||||| ||||| ||   ||||||     
T  21073703 taacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatccattcatgcatacaaacataacatcacagcaagagcacg 21073604  T
Q  101 aatttagca 109  Q
    |||||||||    
T  21073603 aatttagca 21073595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 117; Significance: 9e-60; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 15 - 195
Target Start/End: Complemental strand, 128275 - 128095
Alignment:
Q  15 tacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaat 114  Q
    |||| |||| |||||| ||| | |||||||||| |||| |||| ||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||    
T  128275 tacacatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttgaagcacgaatttagcaacaat 128176  T
Q  115 catccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 195  Q
     |||||||| ||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  128175 tatccataagcaaaattcatacaacttttgaaaatttgcaaaatgaagatgattatgataaagactaacccccttacctta 128095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 117; Significance: 9e-60; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 2 - 195
Target Start/End: Original strand, 23153591 - 23153786
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 101  Q
    ||||| |||||| | | ||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||| |    
T  23153591 aacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacga 23153690  T
Q  102 atttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 195  Q
    |||||| |||||| |||||| ||   |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  23153691 atttagaaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgatgaagactaacccccttacctta 23153786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 14626238 - 14626045
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcaca 100  Q
    |||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||| ||||| ||   ||||||     
T  14626238 taacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacg 14626139  T
Q  101 aatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctt 194  Q
    |||||||||| ||| ||||||||||| |||||| ||||||||||| |||||  ||| ||| ||||||| ||||||  |||||||||||||||||    
T  14626138 aatttagcaataattatccataatcacaattcaaacaacatttgagaatttgtaaagtgaagatgattgtgataataactaacccccttacctt 14626045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 126 - 195
Target Start/End: Original strand, 23148266 - 23148335
Alignment:
Q  126 aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 195  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  23148266 aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgatgaagactaacccccttacctta 23148335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 121
Target Start/End: Complemental strand, 35009558 - 35009439
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 101  Q
    |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| |||| |||||||||||||||||||| || ||||| |||| |||||| |    
T  35009558 aacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacttaacatcacagttagagcacga 35009459  T
Q  102 atttagcaacaatcatccat 121  Q
    ||||||||||||| ||||||    
T  35009458 atttagcaacaattatccat 35009439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 163 - 228
Target Start/End: Complemental strand, 19983224 - 19983159
Alignment:
Q  163 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttt 228  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19983224 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttt 19983159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 163 - 228
Target Start/End: Complemental strand, 35015089 - 35015024
Alignment:
Q  163 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttt 228  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  35015089 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttt 35015024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 1657868 - 1657748
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcaca 100  Q
    ||||||| ||||| |||||| || ||||||  || | ||||||||||||||| |||| |||||||||||||| |||||||| ||||| |||| ||||||     
T  1657868 taacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatccaaacataacatcacagttagagcacg 1657769  T
Q  101 aatttagcaacaatcatccat 121  Q
    |||||||||||||| ||||||    
T  1657768 aatttagcaacaattatccat 1657748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 15862614 - 15862734
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcaca 100  Q
    ||||||| ||||| |||||| || ||||||  || | ||||||||||||||| |||| ||||||||||||||||||||||| ||||| |||| ||||||     
T  15862614 taacttcacatttatacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagttagagcacg 15862713  T
Q  101 aatttagcaacaatcatccat 121  Q
    ||||||| |||||| ||||||    
T  15862714 aatttagtaacaattatccat 15862734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 196
Target Start/End: Complemental strand, 1650212 - 1650020
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 101  Q
    ||||| |||||  ||||||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||||||||| || ||||| |||  |||||| |    
T  1650212 aacttatcattcttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacgtaacatcacagtaagagcacga 1650113  T
Q  102 atttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaa 196  Q
    || |||||  |||  | ||| || | |  ||||||||||||  |||||  | |||||| |  ||||||||||||||||||||||||||||||||||    
T  1650112 atctagcatgaattgttcatcaacccattttcatacaacatgagaaaa--tgcaaaatta-catgattatgataaagactaacccccttaccttaa 1650020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 163 - 228
Target Start/End: Original strand, 18583640 - 18583705
Alignment:
Q  163 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttt 228  Q
    ||||||||||| || |||||||||||||||||||||||| ||||||| || ||| |||||||||||    
T  18583640 atgattatgatgaaaactaacccccttaccttaattatcaccaactattaactcaagcttcacttt 18583705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 38 - 121
Target Start/End: Original strand, 27751605 - 27751688
Alignment:
Q  38 accaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaatcatccat 121  Q
    ||||||||||||||| || | ||||||||||||||||||||||| ||||| | || |||||| |||||||| ||| | ||||||    
T  27751605 accaacaatcatacaattgtcatcaattcatgcatacaaacataacatcacaattagagcacgaatttagctacatttatccat 27751688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 18002427 - 18002395
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    |||||||||||||||||||||||||||||||||    
T  18002427 atgattatgataaagactaacccccttacctta 18002395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 195
Target Start/End: Original strand, 23995247 - 23995279
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    |||||||||||||||||||||||||||||||||    
T  23995247 atgattatgataaagactaacccccttacctta 23995279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 195
Target Start/End: Original strand, 26090059 - 26090091
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    |||||||||||||||||||||||||||||||||    
T  26090059 atgattatgataaagactaacccccttacctta 26090091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 194
Target Start/End: Original strand, 4991396 - 4991427
Alignment:
Q  163 atgattatgataaagactaacccccttacctt 194  Q
    ||||||||||||||||||||||||||||||||    
T  4991396 atgattatgataaagactaacccccttacctt 4991427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 195
Target Start/End: Complemental strand, 15742150 - 15742120
Alignment:
Q  165 gattatgataaagactaacccccttacctta 195  Q
    |||||||||||||||||||||||||||||||    
T  15742150 gattatgataaagactaacccccttacctta 15742120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 229
Target Start/End: Original strand, 21623506 - 21623556
Alignment:
Q  179 ctaacccccttaccttaattatctccaactactagctctagcttcacttta 229  Q
    ||||||||||||||||||||||| |||| | ||||| | ||||||||||||    
T  21623506 ctaacccccttaccttaattatcaccaattcctagcccaagcttcacttta 21623556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 121
Target Start/End: Original strand, 29666040 - 29666137
Alignment:
Q  24 aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaatcatccat 121  Q
    ||||||| ||| | ||| ||||||||||| |||| |||||||||| ||||  || ||| ||||| || | |||||| |||||| ||||||| ||||||    
T  29666040 aaacatgtaatttcacccacaatcatacaattatcatcaattcatacataagaaaataacatcacagctagagcacgaatttaacaacaattatccat 29666137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 1657693 - 1657661
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    ||||||||||| |||||||||||||||||||||    
T  1657693 atgattatgatgaagactaacccccttacctta 1657661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 195
Target Start/End: Original strand, 15862789 - 15862821
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    ||||||||||| |||||||||||||||||||||    
T  15862789 atgattatgatgaagactaacccccttacctta 15862821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 18823315 - 18823283
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    ||||||||||| |||||||||||||||||||||    
T  18823315 atgattatgatgaagactaacccccttacctta 18823283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 18839170 - 18839138
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    ||||||||||| |||||||||||||||||||||    
T  18839170 atgattatgatgaagactaacccccttacctta 18839138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 25175707 - 25175787
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacata 81  Q
    |||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  ||  |||||||||||||||||||||||    
T  25175707 taacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacata 25175787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 27654091 - 27653983
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcaca 100  Q
    |||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  ||  |||||||||||||||||| |||| ||||| ||   ||||||     
T  27654091 taacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaagcataacatcacagcaagagcacg 27653992  T
Q  101 aatttagca 109  Q
    |||||||||    
T  27653991 aatttagca 27653983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 195
Target Start/End: Original strand, 27751742 - 27751774
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    ||||||||||| |||||||||||||||||||||    
T  27751742 atgattatgatgaagactaacccccttacctta 27751774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 32276691 - 32276659
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    ||||||||||| |||||||||||||||||||||    
T  32276691 atgattatgatgaagactaacccccttacctta 32276659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 115; Significance: 1e-58; HSPs: 3)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 2 - 195
Target Start/End: Complemental strand, 26534 - 26340
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 101  Q
    ||||| |||||| ||||||||| |||||| | | | ||||| |||| |||| |||| ||||||||| ||||||||||||||||||||||||||||||| |    
T  26534 aacttatcatttttacatatttgaacatgtactttcaccaataatcttacaattatcatcaattcacgcatacaaacatatcatcaaagttggagcacga 26435  T
Q  102 atttagcaacaatcatccataatcaaaa-ttcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 195  Q
    ||||||||||||| || ||| || |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  26434 atttagcaacaattatacattatgaaaaattcatacaacatttgaaaatttacaaaatgatcatgattatgataaagactaacccccttacctta 26340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 2 - 121
Target Start/End: Complemental strand, 8299 - 8180
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 101  Q
    |||||| ||||| |||||| || ||| || ||| | ||||||||||||||| |||| | ||||||||||||||||||||| ||||| |||| |||||| |    
T  8299 aacttcacatttttacataattgaacctgtaatttcaccaacaatcatacaattatcaccaattcatgcatacaaacataacatcacagttagagcacga 8200  T
Q  102 atttagcaacaatcatccat 121  Q
    ||||||||||||| ||||||    
T  8199 atttagcaacaattatccat 8180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 229
Target Start/End: Complemental strand, 6934 - 6884
Alignment:
Q  179 ctaacccccttaccttaattatctccaactactagctctagcttcacttta 229  Q
    ||||||||||||||||||||||| |||| | ||||| | ||||||||||||    
T  6934 ctaacccccttaccttaattatcaccaattcctagcccaagcttcacttta 6884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 114; Significance: 6e-58; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 2 - 196
Target Start/End: Complemental strand, 37032 - 36836
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 101  Q
    ||||| |||||| ||||||||| |||||| ||| | |||||||| | |||| |||| ||||||||||||||||||||||||||||| ||||||||||| |    
T  37032 aacttatcatttttacatatttgaacatgtaatttcaccaacaagcttacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacga 36933  T
Q  102 atttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaa 196  Q
    ||||| ||||||| |||||| ||   |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  36932 atttaacaacaattatccattatgcaaaaattcatacaacatttgaaatttcacaaaatgatgatgattatgataaagactaacccccttaccttaa 36836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 228
Target Start/End: Complemental strand, 15398 - 15334
Alignment:
Q  164 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttt 228  Q
    |||||||||| ||  ||||||||||||||||||||||||||||||| |||| | |||||||||||    
T  15398 tgattatgatgaatgctaacccccttaccttaattatctccaactattagcccaagcttcacttt 15334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 113; Significance: 2e-57; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 2 - 195
Target Start/End: Complemental strand, 247561 - 247366
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 101  Q
    ||||| |||||| | | ||||| |||||| ||| | |||  |||||||||| |||| ||||||||||||||||||||||||||| | ||||||||||| |    
T  247561 aacttatcatttgttcctatttgaacatgaaatttcaccctcaatcatacaattatcatcaattcatgcatacaaacatatcattacagttggagcacga 247462  T
Q  102 atttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 195  Q
    ||||||||||||| |||||| ||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  247461 atttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 247366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 34107 - 34075
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    ||||||||||| |||||||||||||||||||||    
T  34107 atgattatgatgaagactaacccccttacctta 34075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 111; Significance: 4e-56; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 2 - 195
Target Start/End: Original strand, 12257 - 12450
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 101  Q
    ||||| |||||| |||| ||||||||||| | | | ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||| |||||| |    
T  12257 aacttatcatttttacacatttaaacatgtattttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttagagcacga 12356  T
Q  102 atttagcaacaatcatccataatcaaaa-ttcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 195  Q
    ||||||||||||| |||||||||||||| |||||||| |||||| ||| ||||||||| | ||||||||||||||||||||||||||||||||||    
T  12357 atttagcaacaattatccataatcaaaatttcatacagcatttg-aaagttacaaaattaagatgattatgataaagactaacccccttacctta 12450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 111; Significance: 4e-56; HSPs: 2)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 2 - 192
Target Start/End: Original strand, 19350 - 19543
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 101  Q
    ||||| |||||| ||||||||| |||||| ||| | |||||||||| |||| |||| ||||||||||||||||||||||||||||| ||||||||||| |    
T  19350 aacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacga 19449  T
Q  102 atttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttac-aaaatgatgatgattatgataaagactaacccccttacc 192  Q
    ||||||||||||| |||||| ||   |||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||    
T  19450 atttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaaattatgatgattatgatgaagactaacccccttacc 19543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 2 - 121
Target Start/End: Original strand, 21434 - 21553
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 101  Q
    ||||| |||||| ||||||||| |||||| ||| | |||||||||| |||| |||| ||||||||||||||||||||||||||||| ||||||||||| |    
T  21434 aacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacga 21533  T
Q  102 atttagcaacaatcatccat 121  Q
    ||||||||||||| ||||||    
T  21534 atttagcaacaattatccat 21553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 108; Significance: 2e-54; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 19 - 195
Target Start/End: Complemental strand, 89556 - 89378
Alignment:
Q  19 tatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaatcatc 118  Q
    ||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||| |||    
T  89556 tatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaatatatcatcacagttggagcacgaatttagcaacaattatc 89457  T
Q  119 cataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 195  Q
    ||| ||   |||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  89456 cattatgcaaaaattcatagaacatttgaaaatttacaaaatgatgatgatcatgatgaagactaacccccttacctta 89378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 70 - 195
Target Start/End: Complemental strand, 107835 - 107708
Alignment:
Q  70 catacaaacatatcatcaaagttggagcacaaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaaatgatgatgat 167  Q
    |||||||| ||||||||| ||||||||||| |||||||||| ||| |||||| ||   ||||||||||||||||||||||||||||||||||||||||||    
T  107835 catacaaatatatcatcacagttggagcacgaatttagcaaaaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 107736  T
Q  168 tatgataaagactaacccccttacctta 195  Q
     ||||| |||||||||||||||||||||    
T  107735 catgatgaagactaacccccttacctta 107708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 194
Target Start/End: Original strand, 130880 - 130911
Alignment:
Q  163 atgattatgataaagactaacccccttacctt 194  Q
    ||||||||||||||||||||||||||||||||    
T  130880 atgattatgataaagactaacccccttacctt 130911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 102; Significance: 8e-51; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 2 - 195
Target Start/End: Original strand, 272169 - 272362
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 101  Q
    ||||| |||||| | | ||||| |||||| ||| |  ||| |||||||||| |||| |||||||||| |||||||||||||||| | |||||||| ||      
T  272169 aacttatcatttgttcctatttgaacatgtaatttctccatcaatcatacaattatcatcaattcattcatacaaacatatcattacagttggagtacgt 272268  T
Q  102 atttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 195  Q
    ||||||||| | | |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  272269 atttagcaatatttatccataatcaaaatttatacaatatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 272362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 2 - 185
Target Start/End: Complemental strand, 5180 - 4996
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 101  Q
    ||||| |||||| ||||||||| |||||| | | | |||||||||| |||| |||| ||||||||| ||||||||||||||| ||| |||||||| || |    
T  5180 aacttatcatttttacatatttgaacatgtactttcaccaacaatcttacaattatcatcaattcacgcatacaaacatatcgtcacagttggagtacga 5081  T
Q  102 atttagcaacaatcatccataatcaaaa-ttcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccc 185  Q
    ||||||||||||| |||||| || |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  5080 atttagcaacaattatccattatgaaaaattcatacaacatttgaaaatttacaaaatgataatgattatgataaagactaaccc 4996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 99; Significance: 5e-49; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 9 - 195
Target Start/End: Original strand, 9029 - 9215
Alignment:
Q  9 catttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagc 108  Q
    ||||| |||||| || |||||| ||| | |||||||||| |||| |||| ||| ||||||||||||||||||| ||||| |  |||||||| ||||||||    
T  9029 catttttacataattgaacatgtaatttcaccaacaatcttacaattatcatcgattcatgcatacaaacataacatcacaaatggagcacgaatttagc 9128  T
Q  109 aacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 195  Q
    ||||||  ||||||| |||||||| |||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  9129 aacaattttccataagcaaaattcgtacaacttttgaaaatttgcaaaatgaagatgattatgataaagactaacccccttacctta 9215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 2 - 195
Target Start/End: Complemental strand, 123283 - 123087
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 101  Q
    ||||| |||||| | | ||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| | ||||||||| |    
T  123283 aacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacaattggagcacga 123184  T
Q  102 atttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttac-aaaatgatgatgattatgataaagactaacccccttacctta 195  Q
    ||||||||||||| |||||| ||   ||||||||||||||||||| |||||||| ||||| |||||||||||| | |||||||||||||||||||||    
T  123183 atttagcaacaattatccattatgcaaaaattcatacaacatttgcaaatttacaaaaattatgatgattatggtgaagactaacccccttacctta 123087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 85; Significance: 1e-40; HSPs: 4)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 26938 - 27058
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcaca 100  Q
    |||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||     
T  26938 taacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacg 27037  T
Q  101 aatttagcaacaatcatccat 121  Q
    |||||||||||||| ||||||    
T  27038 aatttagcaacaattatccat 27058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 22683 - 22796
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcaca 100  Q
    |||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||     
T  22683 taacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacg 22782  T
Q  101 aatttagcaacaat 114  Q
    ||||||||||||||    
T  22783 aatttagcaacaat 22796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 195
Target Start/End: Original strand, 22857 - 22889
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    |||||||||||||||||||||||||||||||||    
T  22857 atgattatgataaagactaacccccttacctta 22889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 195
Target Start/End: Original strand, 27112 - 27144
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    |||||||||||||||||||||||||||||||||    
T  27112 atgattatgataaagactaacccccttacctta 27144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 85; Significance: 1e-40; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 1702 - 1582
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcaca 100  Q
    |||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||     
T  1702 taacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacg 1603  T
Q  101 aatttagcaacaatcatccat 121  Q
    |||||||||||||| ||||||    
T  1602 aatttagcaacaattatccat 1582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 1528 - 1496
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    |||||||||||||||||||||||||||||||||    
T  1528 atgattatgataaagactaacccccttacctta 1496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 85; Significance: 1e-40; HSPs: 3)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 37186 - 37066
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcaca 100  Q
    |||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||     
T  37186 taacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacg 37087  T
Q  101 aatttagcaacaatcatccat 121  Q
    |||||||||||||| ||||||    
T  37086 aatttagcaacaattatccat 37066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 163 - 228
Target Start/End: Original strand, 41632 - 41697
Alignment:
Q  163 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttt 228  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  41632 atgattgtgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttt 41697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 37012 - 36980
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    |||||||||||||||||||||||||||||||||    
T  37012 atgattatgataaagactaacccccttacctta 36980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 83; Significance: 2e-39; HSPs: 3)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 101 - 195
Target Start/End: Original strand, 146844 - 146938
Alignment:
Q  101 aatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 195  Q
    ||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  146844 aatttaggaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 146938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 2 - 195
Target Start/End: Original strand, 8993 - 9192
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 101  Q
    |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| || |||||||| |    
T  8993 aacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagatggagcacga 9092  T
Q  102 atttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatgataaagactaacccccttacctta 195  Q
    ||||||||||||| |||||  ||   ||||| ||||| ||||||||||| || ||||    ||||||||||||||||| ||||||||| | |||||||||    
T  9093 atttagcaacaattatccaattatgaaaaatacataccacatttgaaaaattgcaaaaatgatgatgatgattatgatgaagactaacacacttacctta 9192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 2 - 147
Target Start/End: Original strand, 148865 - 149012
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 101  Q
    ||||| |||||| ||||||||| |||||| ||| | |||||||||| |||| |||| ||||||||||||||||||||||||||||| |||||||||||||    
T  148865 aacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacaa 148964  T
Q  102 atttagcaacaatcatccataat--caaaattcatacaacatttgaaa 147  Q
    ||||| ||||||| ||| || ||   ||||||||||||||||||||||    
T  148965 atttaacaacaattatcaattatgcaaaaattcatacaacatttgaaa 149012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772 (Bit Score: 72; Significance: 7e-33; HSPs: 2)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 5674 - 5785
Alignment:
Q  3 acttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaaa 102  Q
    |||| |||||| |||||||||||||||| ||| | ||||||||||||||| | || ||||||||||||||||||||||| ||||||||||||||||| ||    
T  5674 acttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcaaagttggagcacgaa 5773  T
Q  103 tttagcaacaat 114  Q
    ||||||||||||    
T  5774 tttagcaacaat 5785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 195
Target Start/End: Original strand, 5846 - 5878
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    ||||||||| |||||||||||||||||||||||    
T  5846 atgattatggtaaagactaacccccttacctta 5878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 68; Significance: 2e-30; HSPs: 3)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 121
Target Start/End: Original strand, 13650 - 13769
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 101  Q
    |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||| |||||||||| |||||| |    
T  13650 aacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcaaagttagagcacga 13749  T
Q  102 atttagcaacaatcatccat 121  Q
    ||||||||||||| ||||||    
T  13750 atttagcaacaattatccat 13769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 163 - 228
Target Start/End: Original strand, 42677 - 42739
Alignment:
Q  163 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttt 228  Q
    |||||||||||||| ||||||||||||||||   ||||||||||||| ||||||||||||||||||    
T  42677 atgattatgataaaaactaacccccttacct---ttatctccaactattagctctagcttcacttt 42739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 195
Target Start/End: Original strand, 13824 - 13856
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    ||||||||||| |||||||||||||||||||||    
T  13824 atgattatgatgaagactaacccccttacctta 13856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1542 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold1542
Description:

Target: scaffold1542; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 636 - 534
Alignment:
Q  19 tatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaatcatc 118  Q
    ||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||    
T  636 tatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatc 537  T
Q  119 cat 121  Q
    |||    
T  536 cat 534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 48331 - 48443
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 101  Q
    ||||| |||||| |||| |||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||| | ||||||||||| |    
T  48331 aacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattacagttggagcacga 48430  T
Q  102 atttagcaacaat 114  Q
    |||||||||||||    
T  48431 atttagcaacaat 48443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 164 - 224
Target Start/End: Original strand, 20493 - 20553
Alignment:
Q  164 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttca 224  Q
    |||||||||| || |||||||||||||||||||||||| ||||||| || ||| |||||||    
T  20493 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttca 20553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 121
Target Start/End: Original strand, 41792 - 41911
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 101  Q
    |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||| ||||| |||| |||||| |    
T  41792 aacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagttagagcacga 41891  T
Q  102 atttagcaacaatcatccat 121  Q
    ||||| ||||||| ||||||    
T  41892 atttaacaacaattatccat 41911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 41957 - 41997
Alignment:
Q  155 aaatgatgatgattatgataaagactaacccccttacctta 195  Q
    ||||||  ||||||||||| |||||||||||||||||||||    
T  41957 aaatgaacatgattatgatgaagactaacccccttacctta 41997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 163 - 228
Target Start/End: Original strand, 80187 - 80252
Alignment:
Q  163 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttt 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  80187 atgattatgataaagactaacccccttaccttaattatctccaactattagctcaagcttcacttt 80252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 57; Significance: 6e-24; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 107891 - 108003
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 101  Q
    ||||| |||||| | || |||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||| | ||||||||||| |    
T  107891 aacttatcatttttgcacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattacagttggagcacga 107990  T
Q  102 atttagcaacaat 114  Q
    |||||| ||||||    
T  107991 atttagtaacaat 108003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 64 - 106
Target Start/End: Complemental strand, 89905 - 89863
Alignment:
Q  64 ttcatgcatacaaacatatcatcaaagttggagcacaaattta 106  Q
    |||||||||||||||||||||||| ||||||||||| ||||||    
T  89905 ttcatgcatacaaacatatcatcatagttggagcacgaattta 89863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 64636 - 64585
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcataca 52  Q
    |||||| |||||| |||||||||||||||| ||| | |||||||||||||||    
T  64636 taacttatcatttttacatatttaaacatgtaatttcaccaacaatcataca 64585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 55; Significance: 9e-23; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 162111 - 162045
Alignment:
Q  162 gatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttt 228  Q
    |||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  162111 gatgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttt 162045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 166197 - 166131
Alignment:
Q  162 gatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttt 228  Q
    |||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  166197 gatgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttt 166131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 116483 - 116417
Alignment:
Q  163 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttta 229  Q
    ||||||||||| ||  ||||||||||||||||||||||| |||| | ||||| | ||||||||||||    
T  116483 atgattatgatgaaatctaacccccttaccttaattatcaccaattcctagcccaagcttcacttta 116417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 163 - 228
Target Start/End: Complemental strand, 5809 - 5744
Alignment:
Q  163 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttt 228  Q
    ||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  5809 atgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttt 5744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 163 - 228
Target Start/End: Complemental strand, 6015 - 5950
Alignment:
Q  163 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttt 228  Q
    ||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  6015 atgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttt 5950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 163 - 228
Target Start/End: Complemental strand, 31212 - 31147
Alignment:
Q  163 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttt 228  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  31212 atgattgtgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttt 31147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 25 - 121
Target Start/End: Complemental strand, 34556 - 34460
Alignment:
Q  25 aacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaatcatccat 121  Q
    |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||| ||||| |||| |||||| |||||||||| ||| ||||||    
T  34556 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagcaataattatccat 34460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 179 - 265
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 87  Q
    |||||| |||||| |||||||||||||||| ||| | ||||||||||||||| | || ||||||||||||||||||||||| |||||    
T  179 taacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatca 265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 228
Target Start/End: Original strand, 30417 - 30482
Alignment:
Q  163 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttt 228  Q
    ||||||||||| || | |||||||||||||||||||||| |||| || || ||| |||||||||||    
T  30417 atgattatgatgaaaaataacccccttaccttaattatcaccaattattaactcaagcttcacttt 30482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 2 - 87
Target Start/End: Complemental strand, 13432 - 13347
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 87  Q
    ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||| |||||    
T  13432 aacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatca 13347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 50; Significance: 9e-20; HSPs: 2)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 2 - 87
Target Start/End: Complemental strand, 9456 - 9371
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 87  Q
    ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||| |||||    
T  9456 aacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatca 9371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 2 - 87
Target Start/End: Complemental strand, 16354 - 16269
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 87  Q
    ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||| |||||    
T  16354 aacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatca 16269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 385 - 319
Alignment:
Q  162 gatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttt 228  Q
    ||||||||||||||||| ||||||| |||||||||||||| ||||||| |||||| |||||||||||    
T  385 gatgattatgataaagaataaccccgttaccttaattatcaccaactattagctcaagcttcacttt 319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 3107 - 3215
Alignment:
Q  2 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 101  Q
    |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| |||| ||||||||||| ||||||||||| ||||| ||   |||||| |    
T  3107 aacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatggatacaaacataacatcacagcaagagcacga 3206  T
Q  102 atttagcaa 110  Q
    |||||||||    
T  3207 atttagcaa 3215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 43149 - 43226
Alignment:
Q  9 catttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatc 86  Q
    ||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||| ||||||| ||||    
T  43149 catttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatagaaacataacatc 43226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1164 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold1164
Description:

Target: scaffold1164; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 228
Target Start/End: Original strand, 1701 - 1765
Alignment:
Q  164 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttt 228  Q
    |||||||||| || |||||||||||||||||||||||| ||||||| || ||| |||||||||||    
T  1701 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcacttt 1765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 228
Target Start/End: Original strand, 94 - 158
Alignment:
Q  164 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttt 228  Q
    |||||||||| || |||||||||||||||||||||||| ||||||| || ||| |||||||||||    
T  94 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcacttt 158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 228
Target Start/End: Complemental strand, 19881 - 19817
Alignment:
Q  164 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttt 228  Q
    |||||||||| || |||||||||||||||||||||||| ||||||| || ||| |||||||||||    
T  19881 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcacttt 19817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 164 - 224
Target Start/End: Complemental strand, 24185 - 24125
Alignment:
Q  164 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttca 224  Q
    |||||||||| || |||||||||||||||||||||||| ||||||| || ||| |||||||    
T  24185 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttca 24125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 14169 - 14083
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 87  Q
    |||||| |||||| ||||||||| |||||| ||| | || |||||||||| | |||| ||||||||||||||||| ||||| |||||    
T  14169 taacttatcatttttacatatttcaacatgtaatttcactaacaatcatataattatcatcaattcatgcatacagacataacatca 14083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 21224 - 21138
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 87  Q
    |||||| |||||| ||||||||| |||||| ||| | || |||||||||| | |||| ||||||| ||| ||||||||||| |||||    
T  21224 taacttatcatttttacatatttgaacatgtaatttcactaacaatcatataattatcatcaattaatggatacaaacataacatca 21138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 5324 - 5254
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgca 71  Q
    |||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||    
T  5324 taacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 5254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1711 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold1711
Description:

Target: scaffold1711; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 1412 - 1304
Alignment:
Q  1 taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcaca 100  Q
    |||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||||||||||| ||||| ||   ||||||     
T  1412 taacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacg 1313  T
Q  101 aatttagca 109  Q
    |||||||||    
T  1312 aatttagca 1304  T

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Target: scaffold0310 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 164 - 228
Target Start/End: Complemental strand, 6335 - 6271
Alignment:
Q  164 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttt 228  Q
    |||||||||| || |||||||||||||||||||||||| || |||| || ||| |||||||||||    
T  6335 tgattatgatgaacactaacccccttaccttaattatcacccactattaactcaagcttcacttt 6271  T

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Target: scaffold0310; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 201
Target Start/End: Complemental strand, 41 - 4
Alignment:
Q  164 tgattatgataaagactaacccccttaccttaattatc 201  Q
    |||||||||| || ||||||||||||||||||||||||    
T  41 tgattatgatgaacactaacccccttaccttaattatc 4  T

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Target: scaffold0361 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 121
Target Start/End: Original strand, 3370 - 3453
Alignment:
Q  38 accaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaatcatccat 121  Q
    |||||||||||||||  ||| || ||||||||||||||||| || ||||| || | |||||| ||||||||| |||| ||||||    
T  3370 accaacaatcatacaaatatcattaattcatgcatacaaacttaacatcacagctagagcacgaatttagcatcaattatccat 3453  T

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Target: scaffold0507 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 1436 - 1370
Alignment:
Q  163 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttta 229  Q
    ||||||||||| ||  ||||||||||||||| ||||||| |||| | ||||||| ||||||||||||    
T  1436 atgattatgatgaattctaacccccttacctcaattatcaccaattcctagctcaagcttcacttta 1370  T

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Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 196
Target Start/End: Complemental strand, 193429 - 193396
Alignment:
Q  163 atgattatgataaagactaacccccttaccttaa 196  Q
    ||||||||||||||||||||||||||||||||||    
T  193429 atgattatgataaagactaacccccttaccttaa 193396  T

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Target: scaffold0706 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 6475 - 6443
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    |||||||||||||||||||||||||||||||||    
T  6475 atgattatgataaagactaacccccttacctta 6443  T

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Target: scaffold0597 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 910 - 878
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    |||||||||||||||||||||||||||||||||    
T  910 atgattatgataaagactaacccccttacctta 878  T

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Target: scaffold0465 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 9914 - 9882
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    |||||||||||||||||||||||||||||||||    
T  9914 atgattatgataaagactaacccccttacctta 9882  T

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Target: scaffold0369 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 3880 - 3936
Alignment:
Q  15 tacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgca 71  Q
    ||||||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||    
T  3880 tacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 3936  T

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Target: scaffold0251 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 13317 - 13285
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    |||||||||||||||||||||||||||||||||    
T  13317 atgattatgataaagactaacccccttacctta 13285  T

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Target: scaffold0058 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 57424 - 57392
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    |||||||||||||||||||||||||||||||||    
T  57424 atgattatgataaagactaacccccttacctta 57392  T

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Target: scaffold0058; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 105
Target Start/End: Complemental strand, 70348 - 70307
Alignment:
Q  64 ttcatgcatacaaacatatcatcaaagttggagcacaaattt 105  Q
    |||||||||||||||||||||||| |||||||| || |||||    
T  70348 ttcatgcatacaaacatatcatcatagttggagtacgaattt 70307  T

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Target: scaffold0032 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 195
Target Start/End: Original strand, 55904 - 55936
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    |||||||||||||||||||||||||||||||||    
T  55904 atgattatgataaagactaacccccttacctta 55936  T

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Target: scaffold0032; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 108107 - 108075
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    |||||||||||||||||||||||||||||||||    
T  108107 atgattatgataaagactaacccccttacctta 108075  T

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Target: scaffold0207 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 195
Target Start/End: Original strand, 18015 - 18058
Alignment:
Q  152 acaaaatgatgatgattatgataaagactaacccccttacctta 195  Q
    ||||||| || ||||||||||| |||||||||||||||||||||    
T  18015 acaaaataattatgattatgatgaagactaacccccttacctta 18058  T

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Target: scaffold0013 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 229
Target Start/End: Original strand, 35816 - 35866
Alignment:
Q  179 ctaacccccttaccttaattatctccaactactagctctagcttcacttta 229  Q
    ||||||||||||||||||||||| |||| | ||||| | ||||||||||||    
T  35816 ctaacccccttaccttaattatcaccaattcctagcccaagcttcacttta 35866  T

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Target: scaffold0456 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 105
Target Start/End: Complemental strand, 1587 - 1546
Alignment:
Q  64 ttcatgcatacaaacatatcatcaaagttggagcacaaattt 105  Q
    |||||||||||||||||||||||| |||| |||||| |||||    
T  1587 ttcatgcatacaaacatatcatcatagttagagcacgaattt 1546  T

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Target: scaffold0456; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 105
Target Start/End: Complemental strand, 8732 - 8691
Alignment:
Q  64 ttcatgcatacaaacatatcatcaaagttggagcacaaattt 105  Q
    |||||||||||||||||||||||| |||| |||||| |||||    
T  8732 ttcatgcatacaaacatatcatcatagttagagcacgaattt 8691  T

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Target: scaffold0123 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 8216 - 8257
Alignment:
Q  64 ttcatgcatacaaacatatcatcaaagttggagcacaaattt 105  Q
    |||||||||||||||||||||||| |||| |||||| |||||    
T  8216 ttcatgcatacaaacatatcatcatagttagagcacgaattt 8257  T

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Target: scaffold0367 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 17241 - 17209
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    ||||||||||| |||||||||||||||||||||    
T  17241 atgattatgatgaagactaacccccttacctta 17209  T

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Target: scaffold0335 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 5508 - 5476
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    ||||||||||| |||||||||||||||||||||    
T  5508 atgattatgatgaagactaacccccttacctta 5476  T

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Target: scaffold0303 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 4378 - 4346
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    ||||||||||||||| |||||||||||||||||    
T  4378 atgattatgataaagtctaacccccttacctta 4346  T

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Target: scaffold0234 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 17336 - 17304
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    ||||||||||||||||||||||| |||||||||    
T  17336 atgattatgataaagactaacccgcttacctta 17304  T

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Target: scaffold0173 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 195
Target Start/End: Original strand, 5549 - 5581
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    ||||||||||| |||||||||||||||||||||    
T  5549 atgattatgatgaagactaacccccttacctta 5581  T

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Target: scaffold0118 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 34340 - 34308
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    ||||||||||| |||||||||||||||||||||    
T  34340 atgattatgatgaagactaacccccttacctta 34308  T

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Target: scaffold0084 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 114
Target Start/End: Complemental strand, 56178 - 56106
Alignment:
Q  42 acaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaat 114  Q
    ||||||||||| |||| ||||| ||||||| || || ||| ||||| |||| |||||| |||||| |||||||    
T  56178 acaatcatacaattatcatcaaatcatgcacacgaaaataacatcacagttagagcacgaatttaacaacaat 56106  T

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Target: scaffold0066 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 195
Target Start/End: Original strand, 45338 - 45370
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    ||||||||||| |||||||||||||||||||||    
T  45338 atgattatgatgaagactaacccccttacctta 45370  T

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Target: scaffold0039 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 12450 - 12418
Alignment:
Q  163 atgattatgataaagactaacccccttacctta 195  Q
    |||||||||||||| ||||||||||||||||||    
T  12450 atgattatgataaaaactaacccccttacctta 12418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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