View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0302_1D_low_5 (Length: 406)
Name: NF0302_1D_low_5
Description: NF0302_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0302_1D_low_5 |
 | |
|
| [»] scaffold0083 (2 HSPs) |
| | |
|
| [»] scaffold0002 (2 HSPs) |
| | |
|
Alignment Details
Target: chr8 (Bit Score: 343; Significance: 0; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 343; E-Value: 0
Query Start/End: Original strand, 1 - 385
Target Start/End: Original strand, 11486035 - 11486416
Alignment:
| Q |
1 |
atttcaaatgcttgcgaagcttcctacccattgatttctcggatttttataatcttcacttatccaccaaggtggttgttgatttgctaccaacactcaa |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11486035 |
atttcaaatgcttgcgaagcttcctacccattgatttctcggattttaata---ttcacttatccaccaaggtggttgttgatttgctaccaacactcaa |
11486131 |
T |
|
| Q |
101 |
aaggttgcatgtgttatcgctatcaaagtatacaaacatcttcgagctaccagattcaattggcaatttggtgcaattgcgatatctagatctctcctcc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11486132 |
aaggttgcatgtgttatcgctatcaaagtatacaaacatcttcgagctaccagattcaattggcaatttggtgcaattgcgatatctagatctctcctcc |
11486231 |
T |
|
| Q |
201 |
actaatatcaaaagcttgcctgatacaatatgcaacctttacaatttgcaaaccttgcttttatcaagatgttggtgtctcactgaattgccagtacata |
300 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
11486232 |
actaatatcggtagcttgcctgatacaatatgcaacctttacaatttgcaaaccttgcttttatcaagatgtcagtgtctcactgaattgccagtacata |
11486331 |
T |
|
| Q |
301 |
tgggaaatttaatcaacttatgtcaccttgatataagttctacggatataaaggagttgccaatggaaatttgtgggctagaaag |
385 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11486332 |
tgggaaatttaatcaacttacgtcaccttgatataagttctacggatataaaggagttgccaatggaaatttgtgggctagaaag |
11486416 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 58 - 384
Target Start/End: Complemental strand, 44956692 - 44956366
Alignment:
| Q |
58 |
acttatccaccaaggtggttgttgatttgctaccaacactcaaaaggttgcatgtgttatcgctatcaaagtatacaaacatcttcgagctaccagattc |
157 |
Q |
| |
|
|||||||| ||||||||||| ||||||| |||| |||||||||||||||| ||||||| |||||| |||| ||||||| | | ||||||||||| |
|
|
| T |
44956692 |
acttatccctcaaggtggttgatgatttgatacccacactcaaaaggttgcgcatgttatcactatcagcttatagaaacatcaccaaactaccagattc |
44956593 |
T |
|
| Q |
158 |
aattggcaatttggtgcaattgcgatatctagatctctcctccactaatatcaaaagcttgcctgatacaatatgcaacctttacaatttgcaaaccttg |
257 |
Q |
| |
|
|||||| ||||||||||| ||||| |||| |||||||||| || | |||||||||||||||||||| | ||| |||||||||||| || ||||| || |
|
|
| T |
44956592 |
aattggaaatttggtgcatttgcggtatccggatctctcctttacaagaatcaaaagcttgcctgataccacatgtaacctttacaatctggaaaccctg |
44956493 |
T |
|
| Q |
258 |
cttttatcaagatgttggtgtctcactgaattgccagtacatatgggaaatttaatcaacttatgtcaccttgatataagttctacggatataaaggagt |
357 |
Q |
| |
|
||||| ||||| |||||||||||||||||| |||||||||||||||| || ||| |||| |||||||||| | || ||||||||||||| |
|
|
| T |
44956492 |
attttagttgattgttgcaatctcactgaattgccagtgaatatgggaaatttaataaatttacgtcatcttgatataattggaactgatataaaggagt |
44956393 |
T |
|
| Q |
358 |
tgccaatggaaatttgtgggctagaaa |
384 |
Q |
| |
|
| || || |||||| |||| ||||||| |
|
|
| T |
44956392 |
ttcccatagaaattggtggactagaaa |
44956366 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 168; Significance: 6e-90; HSPs: 34)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 57 - 340
Target Start/End: Original strand, 10678491 - 10678774
Alignment:
| Q |
57 |
cacttatccaccaaggtggttgttgatttgctaccaacactcaaaaggttgcatgtgttatcgctatcaaagtatacaaacatcttcgagctaccagatt |
156 |
Q |
| |
|
||||||||||||||||| || | ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||| | ||||||| |||| |
|
|
| T |
10678491 |
cacttatccaccaaggtagtcgatgatttgctaccaacactcaaaaggttgcgtgtgttatcgctgtcaaagtatacaaatatcaccaagctacctgatt |
10678590 |
T |
|
| Q |
157 |
caattggcaatttggtgcaattgcgatatctagatctctcctccactaatatcaaaagcttgcctgatacaatatgcaacctttacaatttgcaaacctt |
256 |
Q |
| |
|
||||||||||||||||||| ||||| |||||||||||||| | |||| | ||||||||||||||||||||| ||| |||||||| |||||||| || || |
|
|
| T |
10678591 |
caattggcaatttggtgcagttgcggtatctagatctctctttcactgaaatcaaaagcttgcctgatacatcatgtaacctttataatttgcagacttt |
10678690 |
T |
|
| Q |
257 |
gcttttatcaagatgttggtgtctcactgaattgccagtacatatgggaaatttaatcaacttatgtcaccttgatataagttc |
340 |
Q |
| |
|
| |||||||||| ||| || |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
10678691 |
gattttatcaagctgtaggaatctcactgaattaccagtacatatgggaaatttaatcaatttatgtcaccttgatataagttc |
10678774 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 56 - 338
Target Start/End: Original strand, 10501638 - 10501920
Alignment:
| Q |
56 |
tcacttatccaccaaggtggttgttgatttgctaccaacactcaaaaggttgcatgtgttatcgctatcaaagtatacaaacatcttcgagctaccagat |
155 |
Q |
| |
|
||||||||||| |||||||||| |||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||| | ||||||||||| |
|
|
| T |
10501638 |
tcacttatccatgaaggtggttgatgatttgctaccaaaactcaaaaggttgcgtgtgttatcgctatccaagtatacaaacatcaccaagctaccagat |
10501737 |
T |
|
| Q |
156 |
tcaattggcaatttggtgcaattgcgatatctagatctctcctccactaatatcaaaagcttgcctgatacaatatgcaacctttacaatttgcaaacct |
255 |
Q |
| |
|
||||||||||||||||||||| || | |||||||||||||||| |||| |||||||||||||||||||| ||||||||||||| ||||||||||||| |
|
|
| T |
10501738 |
tcaattggcaatttggtgcaaatgaggtatctagatctctccttaactagaatcaaaagcttgcctgatacgatatgcaacctttttaatttgcaaacct |
10501837 |
T |
|
| Q |
256 |
tgcttttatcaagatgttggtgtctcactgaattgccagtacatatgggaaatttaatcaacttatgtcaccttgatataagt |
338 |
Q |
| |
|
| |||||| | ||||| ||| ||||||||||| ||||||||||||||||||| ||| |||||||||||||||| |
|
|
| T |
10501838 |
ttattttatttggttgttgcgatctttgtgaattgccagcgaatatgggaaatttaatcaatttacatcaccttgatataagt |
10501920 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 69 - 384
Target Start/End: Original strand, 10664591 - 10664906
Alignment:
| Q |
69 |
aaggtggttgttgatttgctaccaacactcaaaaggttgcatgtgttatcgctatcaaagtatacaaacatcttcgagctaccagattcaattggcaatt |
168 |
Q |
| |
|
|||||| ||| |||||||||| || ||| |||||||||| ||||||||| |||||||||||| ||||||| | | ||||||||| |||||||||||| |
|
|
| T |
10664591 |
aaggtgcttgatgatttgctatcatcacaaaaaaggttgcgtgtgttatctctatcaaagtatgtaaacatcaccaaactaccagatacaattggcaatt |
10664690 |
T |
|
| Q |
169 |
tggtgcaattgcgatatctagatctctcctccactaatatcaaaagcttgcctgatacaatatgcaacctttacaatttgcaaaccttgcttttatcaag |
268 |
Q |
| |
|
| ||||||||||| ||||||||| |||| | |||||| ||| |||||||||||||||||| ||| ||||||||||||||||| |||||| ||||||||| |
|
|
| T |
10664691 |
tagtgcaattgcggtatctagatatctctttcactaaaatcgaaagcttgcctgatacaacatgtaacctttacaatttgcagaccttgaatttatcaag |
10664790 |
T |
|
| Q |
269 |
atgttggtgtctcactgaattgccagtacatatgggaaatttaatcaacttatgtcaccttgatataagttctacggatataaaggagttgccaatggaa |
368 |
Q |
| |
|
||| || ||||||||||||||||||||||||| ||||||||| |||| ||| |||| |||||||||||| || || ||||| |||||||| ||||| |
|
|
| T |
10664791 |
ttgtgggagtctcactgaattgccagtacatattggaaatttagtcaatttacgtcagcttgatataagtgggactgacataaatgagttgcctgtggaa |
10664890 |
T |
|
| Q |
369 |
atttgtgggctagaaa |
384 |
Q |
| |
|
||| | || ||||||| |
|
|
| T |
10664891 |
attgggggactagaaa |
10664906 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 58 - 338
Target Start/End: Original strand, 9850793 - 9851073
Alignment:
| Q |
58 |
acttatccaccaaggtggttgttgatttgctaccaacactcaaaaggttgcatgtgttatcgctatcaaagtatacaaacatcttcgagctaccagattc |
157 |
Q |
| |
|
|||||||| |||||||||| ||||||||||||| ||| |||||||||| ||||||||| ||||| | ||||| ||||||| || ||||||| ||||| |
|
|
| T |
9850793 |
acttatccttcaaggtggttaatgatttgctaccatcacaaaaaaggttgcgtgtgttatcactatcgaggtataaaaacatcatcaagctacctgattc |
9850892 |
T |
|
| Q |
158 |
aattggcaatttggtgcaattgcgatatctagatctctcctccactaatatcaaaagcttgcctgatacaatatgcaacctttacaatttgcaaaccttg |
257 |
Q |
| |
|
|||||| ||||||||||| ||||| ||||||||| |||| | |||| |||||||||||||||||||||||||| ||||||||||||||||| |||||| |
|
|
| T |
9850893 |
aattggaaatttggtgcagttgcggtatctagatatctcattcactggaatcaaaagcttgcctgatacaatatgtaacctttacaatttgcagaccttg |
9850992 |
T |
|
| Q |
258 |
cttttatcaagatgttggtgtctcactgaattgccagtacatatgggaaatttaatcaacttatgtcaccttgatataagt |
338 |
Q |
| |
|
||||||| | ||| || ||||||||||||||||||| ||||| ||||||||| |||| ||| |||||||||||||||| |
|
|
| T |
9850993 |
aatttatcaggttgtaggagtctcactgaattgccagtgcatattggaaatttagtcaatttacatcaccttgatataagt |
9851073 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 58 - 338
Target Start/End: Original strand, 10261752 - 10262032
Alignment:
| Q |
58 |
acttatccaccaaggtggttgttgatttgctaccaacactcaaaaggttgcatgtgttatcgctatcaaagtatacaaacatcttcgagctaccagattc |
157 |
Q |
| |
|
|||||||| |||||||||| ||||||||||||| ||| |||||||||| ||||||||| ||||||| ||||| ||||||| || ||||||||||||| |
|
|
| T |
10261752 |
acttatccttcaaggtggttaatgatttgctaccatcacaaaaaaggttgcgtgtgttatcactatcaaggtataaaaacatcatcaagctaccagattc |
10261851 |
T |
|
| Q |
158 |
aattggcaatttggtgcaattgcgatatctagatctctcctccactaatatcaaaagcttgcctgatacaatatgcaacctttacaatttgcaaaccttg |
257 |
Q |
| |
|
|||||| ||||||||||| |||| ||||||||| |||||| |||||| |||||||||||||||||||||| ||| | ||||||||||||||| |||||| |
|
|
| T |
10261852 |
aattggaaatttggtgcagctgcgttatctagatatctccttcactaaaatcaaaagcttgcctgatacaacatgtagcctttacaatttgcagaccttg |
10261951 |
T |
|
| Q |
258 |
cttttatcaagatgttggtgtctcactgaattgccagtacatatgggaaatttaatcaacttatgtcaccttgatataagt |
338 |
Q |
| |
|
||||||||| ||| |||| |||||||||||| ||||||| ||||||||| || |||| ||||||||||||||||| |
|
|
| T |
10261952 |
aatttatcaaggtgtgacagtcttactgaattgccaatacatattggaaatttagtcggcttacgtcaccttgatataagt |
10262032 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 58 - 337
Target Start/End: Original strand, 9839915 - 9840194
Alignment:
| Q |
58 |
acttatccaccaaggtggttgttgatttgctaccaacactcaaaaggttgcatgtgttatcgctatcaaagtatacaaacatcttcgagctaccagattc |
157 |
Q |
| |
|
|||||||| |||||||||| ||||||||||||| ||| |||||||||| ||||||||| ||||| | ||||| ||||||| || ||||||| ||||| |
|
|
| T |
9839915 |
acttatccttcaaggtggttaatgatttgctaccatcacaaaaaaggttgcgtgtgttatcactatcgaggtataaaaacatcatcaagctacctgattc |
9840014 |
T |
|
| Q |
158 |
aattggcaatttggtgcaattgcgatatctagatctctcctccactaatatcaaaagcttgcctgatacaatatgcaacctttacaatttgcaaaccttg |
257 |
Q |
| |
|
|||||| ||||||||||| ||||| ||||||||| |||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||| |
|
|
| T |
9840015 |
aattggaaatttggtgcagttgcggtatctagatatctccttcactagaatcaaaagcttgcctgatacaatatgtaacctttacaatttgcagaccttg |
9840114 |
T |
|
| Q |
258 |
cttttatcaagatgttggtgtctcactgaattgccagtacatatgggaaatttaatcaacttatgtcaccttgatataag |
337 |
Q |
| |
|
||||||||| ||| |||| |||||||||||||||||||| |||||||| || |||| |||||||||||||||| |
|
|
| T |
9840115 |
aatttatcaaggtgtaacagtcttactgaattgccagtacatattggaaatttggtcggcttacgtcaccttgatataag |
9840194 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 58 - 338
Target Start/End: Original strand, 10581664 - 10581944
Alignment:
| Q |
58 |
acttatccaccaaggtggttgttgatttgctaccaacactcaaaaggttgcatgtgttatcgctatcaaagtatacaaacatcttcgagctaccagattc |
157 |
Q |
| |
|
|||||||| ||||||| ||| |||||| ||||| ||| |||||||||| |||||||||||||||| |||| ||||||| | ||||||||||||| |
|
|
| T |
10581664 |
acttatccttcaaggtgattgatgattttctaccgtcacaaaaaaggttgcgtgtgttatcgctatcagggtatcaaaacatcaccaagctaccagattc |
10581763 |
T |
|
| Q |
158 |
aattggcaatttggtgcaattgcgatatctagatctctcctccactaatatcaaaagcttgcctgatacaatatgcaacctttacaatttgcaaaccttg |
257 |
Q |
| |
|
|||||| ||||||||||| ||||| ||||||||| |||||| |||||| ||| |||||||||||||||||||||| |||||||||||||| || |||||| |
|
|
| T |
10581764 |
aattggaaatttggtgcagttgcggtatctagatatctccttcactaacatcgaaagcttgcctgatacaatatgtaacctttacaatttacagaccttg |
10581863 |
T |
|
| Q |
258 |
cttttatcaagatgttggtgtctcactgaattgccagtacatatgggaaatttaatcaacttatgtcaccttgatataagt |
338 |
Q |
| |
|
|||||||| | ||| ||||||||||||||||| ||||||| ||||||||| |||| ||| ||||||||||||||||| |
|
|
| T |
10581864 |
aatttatcaaactactggagtctcactgaattgccaatacatattggaaatttagtcaatttacgtcaccttgatataagt |
10581944 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 1 - 298
Target Start/End: Complemental strand, 13853752 - 13853458
Alignment:
| Q |
1 |
atttcaaatgcttgcgaagcttcctacccattgatttctcggatttttataatcttcacttatccaccaaggtggttgttgatttgctaccaacactcaa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||| | |||| | ||| || |||||||| |||||||||| |||| |||||||||||||| |
|
|
| T |
13853752 |
atttcaaatgcttgcgaagcttcctacccattaattataagagttttcacaat--tc-cttatccataaaggtggttgacaatttcctaccaacactcaa |
13853656 |
T |
|
| Q |
101 |
aaggttgcatgtgttatcgctatcaaagtatacaaacatcttcgagctaccagattcaattggcaatttggtgcaattgcgatatctagatctctcctcc |
200 |
Q |
| |
|
| ||||| ||| ||||| || |||||||||||||||||| | ||||||||||| ||||||||||||| |||||| |||| |||||||||||||||| |
|
|
| T |
13853655 |
catgttgcgtgtattatcactttcaaagtatacaaacatcaccaagctaccagatacaattggcaatttagtgcaactgcggtatctagatctctcctat |
13853556 |
T |
|
| Q |
201 |
actaatatcaaaagcttgcctgatacaatatgcaacctttacaatttgcaaaccttgcttttatcaagatgttggtgtctcactgaattgccagtaca |
298 |
Q |
| |
|
||| | ||||||||||||| |||||||||||| |||||||||||||||||||||||| |||||||||| ||| | |||||||||||||||||||||| |
|
|
| T |
13853555 |
actgaaatcaaaagcttgcatgatacaatatgtaacctttacaatttgcaaaccttgattttatcaagttgtgagggtctcactgaattgccagtaca |
13853458 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 58 - 311
Target Start/End: Original strand, 10185293 - 10185546
Alignment:
| Q |
58 |
acttatccaccaaggtggttgttgatttgctaccaacactcaaaaggttgcatgtgttatcgctatcaaagtatacaaacatcttcgagctaccagattc |
157 |
Q |
| |
|
|||||||| ||||||||||| ||||||| ||||| ||||||||||||||| |||||||| ||||||||||||| ||||||| | ||||||| ||| | |
|
|
| T |
10185293 |
acttatccttcaaggtggttgatgatttgataccatcactcaaaaggttgcgcgtgttatctctatcaaagtataaaaacatcaccaagctacctgatac |
10185392 |
T |
|
| Q |
158 |
aattggcaatttggtgcaattgcgatatctagatctctcctccactaatatcaaaagcttgcctgatacaatatgcaacctttacaatttgcaaaccttg |
257 |
Q |
| |
|
||||||||| || |||||||||||||||||||||||||| | |||| | || |||||||||||||| ||| ||| ||||||||||||||||| |||||| |
|
|
| T |
10185393 |
aattggcaagttagtgcaattgcgatatctagatctctcattcactgaaattgaaagcttgcctgatgcaacatgtaacctttacaatttgcagaccttg |
10185492 |
T |
|
| Q |
258 |
cttttatcaagatgttggtgtctcactgaattgccagtacatatgggaaattta |
311 |
Q |
| |
|
|||||||||| ||| | |||||||| |||||||||||||||| ||||||||| |
|
|
| T |
10185493 |
attttatcaagttgtgagggtctcactaaattgccagtacatattggaaattta |
10185546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 59 - 337
Target Start/End: Original strand, 10033055 - 10033333
Alignment:
| Q |
59 |
cttatccaccaaggtggttgttgatttgctaccaacactcaaaaggttgcatgtgttatcgctatcaaagtatacaaacatcttcgagctaccagattca |
158 |
Q |
| |
|
||||||| |||||||||||| ||||||||||||| ||| ||| |||||| ||| ||||| |||||| ||||| ||||||| | |||||||||||||| |
|
|
| T |
10033055 |
cttatcctccaaggtggttgatgatttgctaccatcacaaaaacggttgcgtgttttatcactatcatggtatataaacatcaccaagctaccagattca |
10033154 |
T |
|
| Q |
159 |
attggcaatttggtgcaattgcgatatctagatctctcctccactaatatcaaaagcttgcctgatacaatatgcaacctttacaatttgcaaaccttgc |
258 |
Q |
| |
|
||||| ||||||||||| || || |||||| || ||||||| | ||| |||||||||||||||||||||| ||| |||||||||||||| || |||||| |
|
|
| T |
10033155 |
attggaaatttggtgcagttacggtatctacatatctcctcgagtaaaatcaaaagcttgcctgatacaacatgtaacctttacaatttacagaccttga |
10033254 |
T |
|
| Q |
259 |
ttttatcaagatgttggtgtctcactgaattgccagtacatatgggaaatttaatcaacttatgtcaccttgatataag |
337 |
Q |
| |
|
||||||| | |||||| ||||||||||||| ||||||||||| ||||||||| | | ||| |||||||||||||||| |
|
|
| T |
10033255 |
atttatcacgttgttggagtctcactgaattaccagtacatattggaaatttagtaagtttacgtcaccttgatataag |
10033333 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 59 - 337
Target Start/End: Original strand, 10127980 - 10128258
Alignment:
| Q |
59 |
cttatccaccaaggtggttgttgatttgctaccaacactcaaaaggttgcatgtgttatcgctatcaaagtatacaaacatcttcgagctaccagattca |
158 |
Q |
| |
|
||||||| |||||||||||| ||||||||||||| ||| ||| |||||| ||| ||||| |||||| ||||| |||||| | |||||||||||||| |
|
|
| T |
10127980 |
cttatcctccaaggtggttgatgatttgctaccatcacaaaaacggttgcgtgttttatcactatcatggtatatgaacatcaccaagctaccagattca |
10128079 |
T |
|
| Q |
159 |
attggcaatttggtgcaattgcgatatctagatctctcctccactaatatcaaaagcttgcctgatacaatatgcaacctttacaatttgcaaaccttgc |
258 |
Q |
| |
|
||||| ||||||||||| || || ||||||||| |||||| |||||| |||||||||||||||||||||| ||| |||||||||||||| || |||||| |
|
|
| T |
10128080 |
attggaaatttggtgcagttacggtatctagatatctcctgcactaaaatcaaaagcttgcctgatacaacatgtaacctttacaatttacagaccttga |
10128179 |
T |
|
| Q |
259 |
ttttatcaagatgttggtgtctcactgaattgccagtacatatgggaaatttaatcaacttatgtcaccttgatataag |
337 |
Q |
| |
|
||||||| | |||| | ||||||||||||| ||||||||||| ||||||||| | | ||| |||||||||||||||| |
|
|
| T |
10128180 |
atttatcacgttgttcgagtctcactgaattaccagtacatattggaaatttagtaagtttacgtcaccttgatataag |
10128258 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 99 - 337
Target Start/End: Complemental strand, 10362772 - 10362534
Alignment:
| Q |
99 |
aaaaggttgcatgtgttatcgctatcaaagtatacaaacatcttcgagctaccagattcaattggcaatttggtgcaattgcgatatctagatctctcct |
198 |
Q |
| |
|
|||||||||| |||||||||||||||| |||| ||||||| | ||||||||||||||||||| ||||||||||| ||||| ||||||||| |||||| |
|
|
| T |
10362772 |
aaaaggttgcgtgtgttatcgctatcagggtatgtaaacatcaccaagctaccagattcaattggaaatttggtgcagttgcggtatctagatatctcct |
10362673 |
T |
|
| Q |
199 |
ccactaatatcaaaagcttgcctgatacaatatgcaacctttacaatttgcaaaccttgcttttatcaagatgttggtgtctcactgaattgccagtaca |
298 |
Q |
| |
|
|| ||| |||||||||||||||||||||| ||| |||||||||||||| || |||||| ||||||||| |||||| ||||||||||||| |||||||| |
|
|
| T |
10362672 |
tcagtaaaatcaaaagcttgcctgatacaacatgtaacctttacaatttacagaccttgaatttatcaagttgttggagtctcactgaattaccagtaca |
10362573 |
T |
|
| Q |
299 |
tatgggaaatttaatcaacttatgtcaccttgatataag |
337 |
Q |
| |
|
||| ||||||||| | | ||| |||||||||||||||| |
|
|
| T |
10362572 |
tattggaaatttagtaagtttacgtcaccttgatataag |
10362534 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 58 - 371
Target Start/End: Complemental strand, 10374860 - 10374547
Alignment:
| Q |
58 |
acttatccaccaaggtggttgttgatttgctaccaacactcaaaaggttgcatgtgttatcgctatcaaagtatacaaacatcttcgagctaccagattc |
157 |
Q |
| |
|
|||||||| ||||||||||| |||| |||| ||| ||| |||||| ||| ||||||||| ||||| | ||||||||||||| | |||||||||| |
|
|
| T |
10374860 |
acttatccttcaaggtggttgatgatctgctcccatcacaaaaaaggctgcgtgtgttatcactatcgaggtatacaaacatcactaaattaccagattc |
10374761 |
T |
|
| Q |
158 |
aattggcaatttggtgcaattgcgatatctagatctctcctccactaatatcaaaagcttgcctgatacaatatgcaacctttacaatttgcaaaccttg |
257 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |||||| |||||| |||||||||||||||||||||| ||| | ||||||||| || || |||||| |
|
|
| T |
10374760 |
aattggcaatttggtgcaattgcggtatctagatatctccttcactaacatcaaaagcttgcctgatacaacatgtagcctttacaacttacagaccttg |
10374661 |
T |
|
| Q |
258 |
cttttatcaagatgttggtgtctcactgaattgccagtacatatgggaaatttaatcaacttatgtcaccttgatataagttctacggatataaaggagt |
357 |
Q |
| |
|
|||||||||| ||| |||| |||||||||||||||||||| ||||||||| ||| ||| ||||||||||||||||| || ||||||| |||| |
|
|
| T |
10374660 |
attttatcaaggtgtgacagtcttactgaattgccagtacatattggaaatttagtcagtttacgtcaccttgatataagtgggactaatataaatgagt |
10374561 |
T |
|
| Q |
358 |
tgccaatggaaatt |
371 |
Q |
| |
|
|||| |||||||| |
|
|
| T |
10374560 |
tgcctgtggaaatt |
10374547 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 69 - 338
Target Start/End: Complemental strand, 11780986 - 11780717
Alignment:
| Q |
69 |
aaggtggttgttgatttgctaccaacactcaaaaggttgcatgtgttatcgctatcaaagtatacaaacatcttcgagctaccagattcaattggcaatt |
168 |
Q |
| |
|
|||||||||| |||||| |||||| ||| |||||||||| ||||||||| ||||||| ||||| ||||||| | ||||||||||||||||||| |||| |
|
|
| T |
11780986 |
aaggtggttgatgatttcctaccatcacaaaaaaggttgcgtgtgttatccctatcaaggtataaaaacatcaccaagctaccagattcaattggaaatt |
11780887 |
T |
|
| Q |
169 |
tggtgcaattgcgatatctagatctctcctccactaatatcaaaagcttgcctgatacaatatgcaacctttacaatttgcaaaccttgcttttatcaag |
268 |
Q |
| |
|
||||||| ||||| ||||||||| |||||| |||||| |||||||| ||||||||||||| || || ||||||||||| ||||||||| |||||||||| |
|
|
| T |
11780886 |
tggtgcagttgcggtatctagatatctccttcactaaaatcaaaagattgcctgatacaacatataagctttacaatttacaaaccttgattttatcaag |
11780787 |
T |
|
| Q |
269 |
atgttggtgtctcactgaattgccagtacatatgggaaatttaatcaacttatgtcaccttgatataagt |
338 |
Q |
| |
|
||| | |||||| ||||||||||||||| || ||||||||| ||| || |||| |||||||||||| |
|
|
| T |
11780786 |
ttgtgagagtctcattgaattgccagtacaaattggaaatttagtcagtctacgtcaacttgatataagt |
11780717 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 69 - 338
Target Start/End: Original strand, 10089855 - 10090124
Alignment:
| Q |
69 |
aaggtggttgttgatttgctaccaacactcaaaaggttgcatgtgttatcgctatcaaagtatacaaacatcttcgagctaccagattcaattggcaatt |
168 |
Q |
| |
|
|||||||||| ||||||||||||| ||| |||||||||| | ||||||| |||||| |||| |||||||| | ||||||||||||||||||| |||| |
|
|
| T |
10089855 |
aaggtggttgatgatttgctaccatcacaaaaaaggttgcgtctgttatcactatcagggtatgcaaacatcaccaagctaccagattcaattgggaatt |
10089954 |
T |
|
| Q |
169 |
tggtgcaattgcgatatctagatctctcctccactaatatcaaaagcttgcctgatacaatatgcaacctttacaatttgcaaaccttgcttttatcaag |
268 |
Q |
| |
|
|||||| ||||| ||||||||| |||||| |||| ||| ||||||| |||||||||||||| |||||||||||||| || |||||| |||||||| |
|
|
| T |
10089955 |
tggtgctgttgcggtatctagatatctccttcactggaatcgaaagcttacctgatacaatatgtaacctttacaatttacagaccttgaatttatcaaa |
10090054 |
T |
|
| Q |
269 |
atgttggtgtctcactgaattgccagtacatatgggaaatttaatcaacttatgtcaccttgatataagt |
338 |
Q |
| |
|
|| ||| ||||||||||||| ||| ||||||| ||||||||| ||| ||| ||||||||||||||||| |
|
|
| T |
10090055 |
ctgctggagtctcactgaattaccaatacatattggaaatttagtcagtttacgtcaccttgatataagt |
10090124 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 72 - 338
Target Start/End: Original strand, 11770302 - 11770568
Alignment:
| Q |
72 |
gtggttgttgatttgctaccaacactcaaaaggttgcatgtgttatcgctatcaaagtatacaaacatcttcgagctaccagattcaattggcaatttgg |
171 |
Q |
| |
|
||||||| |||||| |||||| ||| |||||||||| ||||||||| ||||||| ||||| ||||||| | ||||||||||||||||||| ||||||| |
|
|
| T |
11770302 |
gtggttgatgatttcctaccatcacaaaaaaggttgcgtgtgttatccctatcaaggtataaaaacatcaccaagctaccagattcaattggaaatttgg |
11770401 |
T |
|
| Q |
172 |
tgcaattgcgatatctagatctctcctccactaatatcaaaagcttgcctgatacaatatgcaacctttacaatttgcaaaccttgcttttatcaagatg |
271 |
Q |
| |
|
|||| ||||| ||||||||| |||||| |||||| |||||||| ||||||||| || || || ||||||||||| ||||||||| |||||||||| || |
|
|
| T |
11770402 |
tgcagttgcggtatctagatatctccttcactaaaatcaaaagtttgcctgattcatcatataagctttacaatttacaaaccttgattttatcaagttg |
11770501 |
T |
|
| Q |
272 |
ttggtgtctcactgaattgccagtacatatgggaaatttaatcaacttatgtcaccttgatataagt |
338 |
Q |
| |
|
| | ||||| ||||||||||||||| || ||||||||| ||| || ||||||||||||||||| |
|
|
| T |
11770502 |
tgagagtctcgttgaattgccagtacaaattggaaatttagtcagtctacgtcaccttgatataagt |
11770568 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 69 - 338
Target Start/End: Original strand, 10196738 - 10197007
Alignment:
| Q |
69 |
aaggtggttgttgatttgctaccaacactcaaaaggttgcatgtgttatcgctatcaaagtatacaaacatcttcgagctaccagattcaattggcaatt |
168 |
Q |
| |
|
|||||||||| ||||||||||||| ||| |||||||||| | ||||||| |||||| |||| |||||||| | ||||||||||||||||||| |||| |
|
|
| T |
10196738 |
aaggtggttgatgatttgctaccatcacaaaaaaggttgcgtctgttatcactatcagggtatgcaaacatcaccaagctaccagattcaattgggaatt |
10196837 |
T |
|
| Q |
169 |
tggtgcaattgcgatatctagatctctcctccactaatatcaaaagcttgcctgatacaatatgcaacctttacaatttgcaaaccttgcttttatcaag |
268 |
Q |
| |
|
||||| ||||| ||||||||| |||||| |||| ||| ||||||| |||||||||||||| |||||||||||||| || |||||| |||||||| |
|
|
| T |
10196838 |
tggtgttgttgcggtatctagatatctccttcactggaatcgaaagcttacctgatacaatatgtaacctttacaatttacagaccttgaatttatcaaa |
10196937 |
T |
|
| Q |
269 |
atgttggtgtctcactgaattgccagtacatatgggaaatttaatcaacttatgtcaccttgatataagt |
338 |
Q |
| |
|
|| ||| ||||||||||||| ||| ||||||| ||||||||| ||| ||| ||||||||||||||||| |
|
|
| T |
10196938 |
ttgctggagtctcactgaattaccaatacatattggaaatttagtcagtttacgtcaccttgatataagt |
10197007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 69 - 311
Target Start/End: Original strand, 10078331 - 10078576
Alignment:
| Q |
69 |
aaggtggttgttgatttgctaccaacactcaaaaggttgcatgtgttatcgctatcaaagtatacaaacatcttcgagctaccagatt---caattggca |
165 |
Q |
| |
|
||||| |||| ||||||||||||| ||||||||||||||| |||||||| ||||||||||||| ||||||| | ||||||| ||| ||||||||| |
|
|
| T |
10078331 |
aaggtagttgatgatttgctaccatcactcaaaaggttgcgcgtgttatctctatcaaagtataaaaacatcaccaagctacctgatgatacaattggca |
10078430 |
T |
|
| Q |
166 |
atttggtgcaattgcgatatctagatctctcctccactaatatcaaaagcttgcctgatacaatatgcaacctttacaatttgcaaaccttgcttttatc |
265 |
Q |
| |
|
| || |||||||||||| ||||||||||||| | |||| | || ||||||||||| || ||| ||| ||||||||||||||||| |||||| ||||||| |
|
|
| T |
10078431 |
agttagtgcaattgcgaaatctagatctctcattcactgaaattgaaagcttgccttatgcaacatgtaacctttacaatttgcagaccttgattttatc |
10078530 |
T |
|
| Q |
266 |
aagatgttggtgtctcactgaattgccagtacatatgggaaattta |
311 |
Q |
| |
|
||| ||| | |||||||| |||| ||||||||||| ||||||||| |
|
|
| T |
10078531 |
aagttgtgagggtctcactaaattaccagtacatattggaaattta |
10078576 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 99 - 338
Target Start/End: Complemental strand, 10433018 - 10432779
Alignment:
| Q |
99 |
aaaaggttgcatgtgttatcgctatcaaagtatacaaacatcttcgagctaccagattcaattggcaatttggtgcaattgcgatatctagatctctcct |
198 |
Q |
| |
|
||||| |||| |||||||||||||||| ||||| ||||||| | ||||||||||||||||||| ||||||||||| ||||| ||||||||| |||||| |
|
|
| T |
10433018 |
aaaagattgcgtgtgttatcgctatcagggtataaaaacatcaccaagctaccagattcaattggaaatttggtgcagttgcggtatctagatatctcct |
10432919 |
T |
|
| Q |
199 |
ccactaatatcaaaagcttgcctgatacaatatgcaacctttacaatttgcaaaccttgcttttatcaagatgttggtgtctcactgaattgccagtaca |
298 |
Q |
| |
|
| || | ||| ||||||| |||||||||||||| ||||||||||||||||| |||||| |||| |||| ||| | ||||||| |||||||| ||| |
|
|
| T |
10432918 |
tctcttacatcgaaagcttacctgatacaatatgtaacctttacaatttgcagaccttgattttgtcaaaatgcacgactctcactaaattgccaatacg |
10432819 |
T |
|
| Q |
299 |
tatgggaaatttaatcaacttatgtcaccttgatataagt |
338 |
Q |
| |
|
||| |||||||| ||| ||| ||||||||||||||||| |
|
|
| T |
10432818 |
tattggaaatttggtcagtttacgtcaccttgatataagt |
10432779 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 69 - 336
Target Start/End: Original strand, 10518550 - 10518817
Alignment:
| Q |
69 |
aaggtggttgttgatttgctaccaacactcaaaaggttgcatgtgttatcgctatcaaagtatacaaacatcttcgagctaccagattcaattggcaatt |
168 |
Q |
| |
|
|||||||||| |||| |||| ||| ||| || ||||||| ||||||||| || |||| ||||| ||||||| | |||||||||||||||||||||||| |
|
|
| T |
10518550 |
aaggtggttgatgatctgctcccatcacaaaacaggttgcgtgtgttatcactgtcaaggtatagaaacatcaccaagctaccagattcaattggcaatt |
10518649 |
T |
|
| Q |
169 |
tggtgcaattgcgatatctagatctctcctccactaatatcaaaagcttgcctgatacaatatgcaacctttacaatttgcaaaccttgcttttatcaag |
268 |
Q |
| |
|
||||||||||||| ||| ||||| ||||| |||| | ||| |||||||||||||||||| ||| |||||||||||||| || |||||| |||||||| |
|
|
| T |
10518650 |
tggtgcaattgcggtatttagatacctccttcacttacatcgaaagcttgcctgatacaacatgtaacctttacaatttacagaccttgaatttatcaaa |
10518749 |
T |
|
| Q |
269 |
atgttggtgtctcactgaattgccagtacatatgggaaatttaatcaacttatgtcaccttgatataa |
336 |
Q |
| |
|
||| | |||||||||||| ||| ||||| | ||||||||| | | ||| ||||||||||||||| |
|
|
| T |
10518750 |
ctgtacggctctcactgaattaccaatacatgttggaaatttagttagtttacgtcaccttgatataa |
10518817 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 58 - 196
Target Start/End: Original strand, 10528409 - 10528547
Alignment:
| Q |
58 |
acttatccaccaaggtggttgttgatttgctaccaacactcaaaaggttgcatgtgttatcgctatcaaagtatacaaacatcttcgagctaccagattc |
157 |
Q |
| |
|
|||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||| | ||||||| |||| |
|
|
| T |
10528409 |
acttatccaccaaggtagttgatgatttgctaccaacactcaaaaggttgcgtgtgttatcgctgtcaaagtatacaaatatcaccaagctacctgatta |
10528508 |
T |
|
| Q |
158 |
aattggcaatttggtgcaattgcgatatctagatctctc |
196 |
Q |
| |
|
|||||||||||||||| | ||||| |||||||||||||| |
|
|
| T |
10528509 |
aattggcaatttggtgtagttgcggtatctagatctctc |
10528547 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 207 - 340
Target Start/End: Original strand, 10529851 - 10529984
Alignment:
| Q |
207 |
atcaaaagcttgcctgatacaatatgcaacctttacaatttgcaaaccttgcttttatcaagatgttggtgtctcactgaattgccagtacatatgggaa |
306 |
Q |
| |
|
||||||||||||||||||||| ||| |||||||| |||||||| || ||| |||||||||| ||| || |||||||||||| |||||||||||||||| |
|
|
| T |
10529851 |
atcaaaagcttgcctgatacatcatgtaacctttataatttgcagactttgattttatcaagctgtaggaatctcactgaattaccagtacatatgggaa |
10529950 |
T |
|
| Q |
307 |
atttaatcaacttatgtcaccttgatataagttc |
340 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||| |
|
|
| T |
10529951 |
atttaatcaatttatgtcaccttgatataagttc |
10529984 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 159 - 338
Target Start/End: Original strand, 10078565 - 10078744
Alignment:
| Q |
159 |
attggcaatttggtgcaattgcgatatctagatctctcctccactaatatcaaaagcttgcctgatacaatatgcaacctttacaatttgcaaaccttgc |
258 |
Q |
| |
|
||||| ||||| || ||||||| |||||||||||||||| |||| | ||| |||||||||||||| ||| ||||||||||||||||||| | |||||| |
|
|
| T |
10078565 |
attggaaatttagtacaattgcagtatctagatctctccttcactgaaatcgaaagcttgcctgatgcaacatgcaacctttacaatttgaagaccttga |
10078664 |
T |
|
| Q |
259 |
ttttatcaagatgttggtgtctcactgaattgccagtacatatgggaaatttaatcaacttatgtcaccttgatataagt |
338 |
Q |
| |
|
|||||||||| ||| | |||||||||||||||| ||||||| ||||||||| ||| ||| ||||||||||||||||| |
|
|
| T |
10078665 |
ttttatcaagttgtgagagtctcactgaattgccgctacatattggaaatttagtcagtttacgtcaccttgatataagt |
10078744 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 159 - 338
Target Start/End: Original strand, 10185535 - 10185714
Alignment:
| Q |
159 |
attggcaatttggtgcaattgcgatatctagatctctcctccactaatatcaaaagcttgcctgatacaatatgcaacctttacaatttgcaaaccttgc |
258 |
Q |
| |
|
||||| ||||| || ||||||| |||||||||||||||| |||| | ||| |||||||||| ||| ||| ||||||||||||||||||| | |||||| |
|
|
| T |
10185535 |
attggaaatttagtacaattgcagtatctagatctctccttcactgaaatcgaaagcttgccggatgcaacatgcaacctttacaatttgaagaccttga |
10185634 |
T |
|
| Q |
259 |
ttttatcaagatgttggtgtctcactgaattgccagtacatatgggaaatttaatcaacttatgtcaccttgatataagt |
338 |
Q |
| |
|
|||||||||| ||| | |||||||||||||||| ||||||| ||||||||| ||| ||| ||||||||||||||||| |
|
|
| T |
10185635 |
ttttatcaagttgtgagagtctcactgaattgccgctacatattggaaatttagtcagtttacgtcaccttgatataagt |
10185714 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 69 - 266
Target Start/End: Complemental strand, 11159021 - 11158824
Alignment:
| Q |
69 |
aaggtggttgttgatttgctaccaacactcaaaaggttgcatgtgttatcgctatcaaagtatacaaacatcttcgagctaccagattcaattggcaatt |
168 |
Q |
| |
|
|||||||||| |||||||||||| ||| | |||||||| |||||| ||| |||||| ||||| |||||| | ||||| ||||||||||| | || |
|
|
| T |
11159021 |
aaggtggttgatgatttgctacccacatttggaaggttgcgtgtgttgtcgttatcaagatatactaacatcactgtactacctgattcaattggaagtt |
11158922 |
T |
|
| Q |
169 |
tggtgcaattgcgatatctagatctctcctccactaatatcaaaagcttgcctgatacaatatgcaacctttacaatttgcaaaccttgcttttatca |
266 |
Q |
| |
|
||||||| ||||| ||||||||||| || | |||| | |||||||||||||||||||||||||||||||| ||| | |||||||||||| |||||||| |
|
|
| T |
11158921 |
tggtgcagttgcgctatctagatctatcttacactgaaatcaaaagcttgcctgatacaatatgcaacctctactacttgcaaaccttgattttatca |
11158824 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 101 - 266
Target Start/End: Original strand, 10890403 - 10890568
Alignment:
| Q |
101 |
aaggttgcatgtgttatcgctatcaaagtatacaaacatcttcgagctaccagattcaattggcaatttggtgcaattgcgatatctagatctctcctcc |
200 |
Q |
| |
|
|||||||| |||||||||| ||||||| |||||||||||| ||| |||||||||||||||| ||||||||| ||||| ||||||||||| || | |
|
|
| T |
10890403 |
aaggttgcgtgtgttatcgttatcaaaatatacaaacatcacaatgcttccagattcaattggcagtttggtgcagttgcgctatctagatctatctcac |
10890502 |
T |
|
| Q |
201 |
actaatatcaaaagcttgcctgatacaatatgcaacctttacaatttgcaaaccttgcttttatca |
266 |
Q |
| |
|
|| || ||||||||||||||||| | |||||||||||| | | |||||||||||||| |||||||| |
|
|
| T |
10890503 |
acaaaaatcaaaagcttgcctgacataatatgcaacctctgctatttgcaaaccttgattttatca |
10890568 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 69 - 266
Target Start/End: Complemental strand, 11147858 - 11147661
Alignment:
| Q |
69 |
aaggtggttgttgatttgctaccaacactcaaaaggttgcatgtgttatcgctatcaaagtatacaaacatcttcgagctaccagattcaattggcaatt |
168 |
Q |
| |
|
|||||||| | |||||||||||| ||| | |||||||| |||| ||||| ||||||| |||||||||||| ||| |||||||||||||||| || |
|
|
| T |
11147858 |
aaggtggtcgatgatttgctacccacattaggaaggttgcgtgtgctatcgttatcaaaatatacaaacatcacaatgcttccagattcaattggcagtt |
11147759 |
T |
|
| Q |
169 |
tggtgcaattgcgatatctagatctctcctccactaatatcaaaagcttgcctgatacaatatgcaacctttacaatttgcaaaccttgcttttatca |
266 |
Q |
| |
|
||||||| ||||| |||||||||||||| |||| | |||||| |||||||||| |||||||| ||||| ||| |||||||||||||| | |||||| |
|
|
| T |
11147758 |
tggtgcagttgcgctatctagatctctctcacactcaaatcaaaggcttgcctgacacaatatgtaacctctactatttgcaaaccttgatcttatca |
11147661 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 71 - 266
Target Start/End: Complemental strand, 11130031 - 11129836
Alignment:
| Q |
71 |
ggtggttgttgatttgctaccaacactcaaaaggttgcatgtgttatcgctatcaaagtatacaaacatcttcgagctaccagattcaattggcaatttg |
170 |
Q |
| |
|
|||||||| |||||||||||| ||| | | || ||||| |||||| || |||||| ||||| |||||| | ||||| ||||||||||| | |||| |
|
|
| T |
11130031 |
ggtggttgatgatttgctacccacatttagaatgttgcgtgtgttgtcattatcaagatatactaacatcgctgtactacctgattcaattggaagtttg |
11129932 |
T |
|
| Q |
171 |
gtgcaattgcgatatctagatctctcctccactaatatcaaaagcttgcctgatacaatatgcaacctttacaatttgcaaaccttgcttttatca |
266 |
Q |
| |
|
||||| ||||| ||||||||||| || | |||||| ||||||||||||||||| | |||||||||||| ||| |||||||||||||| |||||||| |
|
|
| T |
11129931 |
gtgcagttgcgctatctagatctatcttgcactaaaatcaaaagcttgcctgagataatatgcaacctctactatttgcaaaccttgattttatca |
11129836 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 71 - 266
Target Start/End: Original strand, 8862353 - 8862548
Alignment:
| Q |
71 |
ggtggttgttgatttgctaccaacactcaaaaggttgcatgtgttatcgctatcaaagtatacaaacatcttcgagctaccagattcaattggcaatttg |
170 |
Q |
| |
|
|||||||| |||||||||||| ||| | |||||||| ||||||||| ||||||| |||| ||||||| ||| |||||||| || ||| |||| |
|
|
| T |
8862353 |
ggtggttgatgatttgctacccacatttggaaggttgcgtgtgttatcattatcaaaatatagaaacatcacaatgcttccagattcgatctgcagtttg |
8862452 |
T |
|
| Q |
171 |
gtgcaattgcgatatctagatctctcctccactaatatcaaaagcttgcctgatacaatatgcaacctttacaatttgcaaaccttgcttttatca |
266 |
Q |
| |
|
||||| ||||| ||||||||||| || ||| || ||||||||||||||||| | |||||||||||| ||| |||||||||||||| |||||||| |
|
|
| T |
8862453 |
gtgcagttgcgctatctagatctatctcacacaaaaatcaaaagcttgcctgacataatatgcaacctctactatttgcaaaccttgattttatca |
8862548 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 72 - 266
Target Start/End: Complemental strand, 11245625 - 11245430
Alignment:
| Q |
72 |
gtggttgttgatttgctacca-acactcaaaaggttgcatgtgttatcgctatcaaagtatacaaacatcttcgagctaccagattcaattggcaatttg |
170 |
Q |
| |
|
||||||||||||||||| || ||||| |||| ||| |||||||||| |||||| ||||| |||||| | |||||| ||||||||||| | |||| |
|
|
| T |
11245625 |
gtggttgttgatttgctcccttacacttcgaaggctgcgtgtgttatcgttatcaagatatactaacatcactgtgctacctgattcaattggtagtttg |
11245526 |
T |
|
| Q |
171 |
gtgcaattgcgatatctagatctctcctccactaatatcaaaagcttgcctgatacaatatgcaacctttacaatttgcaaaccttgcttttatca |
266 |
Q |
| |
|
||||| ||||| ||||| ||||||| |||||| ||||||| ||||||| ||||||| |||||||| ||| ||||||||||||||||| ||||| |
|
|
| T |
11245525 |
gtgcagttgcgctatcttgatctctttcacactaaaatcaaaatcttgccttatacaatgtgcaacctctaccatttgcaaaccttgcttctatca |
11245430 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 10501571 - 10501602
Alignment:
| Q |
1 |
atttcaaatgcttgcgaagcttcctacccatt |
32 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
10501571 |
atttcaaatgcttgcgaagcttcctacccatt |
10501602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 266
Target Start/End: Original strand, 13396489 - 13396748
Alignment:
| Q |
1 |
atttcaaatgcttgcgaagcttcctacccattgatttctcggatttttataatcttcacttatccaccaaggtggttgttgatttgctaccaacactcaa |
100 |
Q |
| |
|
||||||||||||||||||| ||||||||||||| |||| || || | |||||| ||||||| || ||| ||| ||||||| |||| || | || |
|
|
| T |
13396489 |
atttcaaatgcttgcgaagtttcctacccattg-gttctagg-ttgcaagaatctt-acttatcatgtaaagtgattgatgatttgataccttcaattaa |
13396585 |
T |
|
| Q |
101 |
aaggttgcatgtgttatcgctatcaaagtatacaaacatcttcgagctaccagattcaattggcaatttggtgcaattgcgatatctagatctctcctcc |
200 |
Q |
| |
|
|||||||| | ||||||| ||||||| ||| |||||| | ||||||| |||||||| || ||||||||| |||| ||||| |||||||| | |
|
|
| T |
13396586 |
aaggttgcgtatgttatccttatcaaattat---aacatcacggtgctaccaaattcaattaataagttggtgcaactgcggtatctgaatctctcccac |
13396682 |
T |
|
| Q |
201 |
actaatatcaaaagcttgcctgatacaatatgcaacctttacaatttgcaaaccttgcttttatca |
266 |
Q |
| |
|
||| | |||||| ||||||| ||||||| ||| |||||||| |||||||||| || ||||||||| |
|
|
| T |
13396683 |
actgacatcaaatgcttgccagatacaacatgtgacctttactatttgcaaactttacttttatca |
13396748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 371
Target Start/End: Original strand, 13162189 - 13162350
Alignment:
| Q |
210 |
aaaagcttgcctgatacaatatgcaacctttacaatttgcaaaccttgcttttatcaagatgttggtgtctcactgaattgccagtacatatgggaaatt |
309 |
Q |
| |
|
|||||||| ||| || ||| |||||| ||||||||| ||||||||||| |||| || |||| |||||||| |||||| ||||| | ||||| | |
|
|
| T |
13162189 |
aaaagcttacctaatgcaacatgcaatctttacaatctgcaaaccttgaatttaacacaatgtgaaaacctcactgagttgccactacattttggaaagt |
13162288 |
T |
|
| Q |
310 |
taatcaacttatgtcaccttgatataagttctacggatataaaggagttgccaatggaaatt |
371 |
Q |
| |
|
|||| |||||| | ||||||||||| ||| || ||||||||||| |||||||| ||||| |
|
|
| T |
13162289 |
taattaacttacggcaccttgatattagtaagacaaatataaaggagatgccaatgcaaatt |
13162350 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 371
Target Start/End: Original strand, 13334113 - 13334274
Alignment:
| Q |
210 |
aaaagcttgcctgatacaatatgcaacctttacaatttgcaaaccttgcttttatcaagatgttggtgtctcactgaattgccagtacatatgggaaatt |
309 |
Q |
| |
|
|||||||| ||| || ||| |||||| ||||||||| ||||||||||| |||| || |||| |||||||| |||||| ||||| | ||||| | |
|
|
| T |
13334113 |
aaaagcttacctaatgcaacatgcaatctttacaatctgcaaaccttgaatttaacacaatgtgaaaacctcactgagttgccactacattttggaaagt |
13334212 |
T |
|
| Q |
310 |
taatcaacttatgtcaccttgatataagttctacggatataaaggagttgccaatggaaatt |
371 |
Q |
| |
|
|||| |||||| | ||||||||||| ||| || ||||||||||| |||||||| ||||| |
|
|
| T |
13334213 |
taattaacttacggcaccttgatattagtaagacaaatataaaggagatgccaatgcaaatt |
13334274 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 142; Significance: 2e-74; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 58 - 371
Target Start/End: Complemental strand, 17851941 - 17851628
Alignment:
| Q |
58 |
acttatccaccaaggtggttgttgatttgctaccaacactcaaaaggttgcatgtgttatcgctatcaaagtatacaaacatcttcgagctaccagattc |
157 |
Q |
| |
|
||||||||| ||||||||||| |||||| ||||||| ||||||||||||| |||||||||||||||||| |||| ||||||| | ||||||||||||| |
|
|
| T |
17851941 |
acttatccatcaaggtggttgatgatttcctaccaaagctcaaaaggttgcgtgtgttatcgctatcaaattataaaaacatcaccaagctaccagattc |
17851842 |
T |
|
| Q |
158 |
aattggcaatttggtgcaattgcgatatctagatctctcctccactaatatcaaaagcttgcctgatacaatatgcaacctttacaatttgcaaaccttg |
257 |
Q |
| |
|
| ||| ||||||||||||||| || |||||||||||||||| |||||| |||||||||||||| |||||| | | ||||||||||||||||||||| || |
|
|
| T |
17851841 |
agttgccaatttggtgcaattacgttatctagatctctccttcactaaaatcaaaagcttgcccaatacaacaagtaacctttacaatttgcaaaccatg |
17851742 |
T |
|
| Q |
258 |
cttttatcaagatgttggtgtctcactgaattgccagtacatatgggaaatttaatcaacttatgtcaccttgatataagttctacggatataaaggagt |
357 |
Q |
| |
|
||||| || ||| || |||||||||||||||| ||||||| |||||||||||||| ||| ||||||||||||||||| ||| |||||||||| |
|
|
| T |
17851741 |
attttagcatattgtcgggttctcactgaattgccattacatattggaaatttaatcaatttacgtcaccttgatataagtgggacgacaataaaggagt |
17851642 |
T |
|
| Q |
358 |
tgccaatggaaatt |
371 |
Q |
| |
|
|||| |||||||| |
|
|
| T |
17851641 |
tgcctgtggaaatt |
17851628 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 141; Significance: 8e-74; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 80 - 336
Target Start/End: Original strand, 26907964 - 26908220
Alignment:
| Q |
80 |
tgatttgctaccaacactcaaaaggttgcatgtgttatcgctatcaaagtatacaaacatcttcgagctaccagattcaattggcaatttggtgcaattg |
179 |
Q |
| |
|
||||||| ||||||||||||||||||||| ||||||||| |||| ||| |||||||||||| ||||||||||||||||||| ||||||||||||||| |
|
|
| T |
26907964 |
tgatttgataccaacactcaaaaggttgcgtgtgttatcactattaaattatacaaacatcacaaagctaccagattcaattggtaatttggtgcaattg |
26908063 |
T |
|
| Q |
180 |
cgatatctagatctctcctccactaatatcaaaagcttgcctgatacaatatgcaacctttacaatttgcaaaccttgcttttatcaagatgttggtgtc |
279 |
Q |
| |
|
|| ||| |||| ||||||| |||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||| | || |
|
|
| T |
26908064 |
cggtatttagacctctccttcactaaaatcaaaagattgcctgatacaatatgtaacctttacaatttgcaaaccttgattttatcaaattgtgaggctc |
26908163 |
T |
|
| Q |
280 |
tcactgaattgccagtacatatgggaaatttaatcaacttatgtcaccttgatataa |
336 |
Q |
| |
|
|||||||||||||| ||||||| ||||||||| |||| ||| ||||||||||||||| |
|
|
| T |
26908164 |
tcactgaattgccattacatattggaaatttagtcaagttacgtcaccttgatataa |
26908220 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 30
Target Start/End: Original strand, 26907892 - 26907920
Alignment:
| Q |
2 |
tttcaaatgcttgcgaagcttcctaccca |
30 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
26907892 |
tttcaaatgcttgcgaagcttcctaccca |
26907920 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0083 (Bit Score: 113; Significance: 4e-57; HSPs: 2)
Name: scaffold0083
Description:
Target: scaffold0083; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 58 - 338
Target Start/End: Complemental strand, 56617 - 56337
Alignment:
| Q |
58 |
acttatccaccaaggtggttgttgatttgctaccaacactcaaaaggttgcatgtgttatcgctatcaaagtatacaaacatcttcgagctaccagattc |
157 |
Q |
| |
|
|||||||| ||||||| ||| ||| || ||||| ||| |||||||||| |||||||||||||||| ||||| ||||||| | ||||||||||||| |
|
|
| T |
56617 |
acttatccttcaaggtgattgatgactttctaccgtcacaaaaaaggttgcgtgtgttatcgctatcagggtataaaaacatcaccaagctaccagattc |
56518 |
T |
|
| Q |
158 |
aattggcaatttggtgcaattgcgatatctagatctctcctccactaatatcaaaagcttgcctgatacaatatgcaacctttacaatttgcaaaccttg |
257 |
Q |
| |
|
|||||| |||| |||||| ||||| ||||||||| |||||| |||| ||| |||||||||||||||||||||| |||||||||||||| || |||||| |
|
|
| T |
56517 |
aattggaaattcggtgcagttgcggtatctagatatctccttcactggaatcgaaagcttgcctgatacaatatgtaacctttacaatttacagaccttg |
56418 |
T |
|
| Q |
258 |
cttttatcaagatgttggtgtctcactgaattgccagtacatatgggaaatttaatcaacttatgtcaccttgatataagt |
338 |
Q |
| |
|
|||||||| || ||| ||||||||||||||||| ||||||| ||||||||| ||| ||| ||||||||||||||||| |
|
|
| T |
56417 |
aatttatcaaactgctggagtctcactgaattgccaatacatattggaaatttagtcagtttacgtcaccttgatataagt |
56337 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0083; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 58 - 338
Target Start/End: Complemental strand, 57426 - 57146
Alignment:
| Q |
58 |
acttatccaccaaggtggttgttgatttgctaccaacactcaaaaggttgcatgtgttatcgctatcaaagtatacaaacatcttcgagctaccagattc |
157 |
Q |
| |
|
|||||||| ||||||| ||| ||| || ||||| ||| |||||||||| |||||||||||||||| ||||| ||||||| | ||||||||||||| |
|
|
| T |
57426 |
acttatccttcaaggtgattgatgactttctaccgtcacaaaaaaggttgcgtgtgttatcgctatcagggtataaaaacatcaccaagctaccagattc |
57327 |
T |
|
| Q |
158 |
aattggcaatttggtgcaattgcgatatctagatctctcctccactaatatcaaaagcttgcctgatacaatatgcaacctttacaatttgcaaaccttg |
257 |
Q |
| |
|
|||||| |||||||||| ||||| ||||||||| |||||| |||| ||| ||||||| |||||||||||||| |||||||||||||| || |||||| |
|
|
| T |
57326 |
aattgggaatttggtgctgttgcggtatctagatatctccttcactggaatcgaaagctttcctgatacaatatgtaacctttacaatttacagaccttg |
57227 |
T |
|
| Q |
258 |
cttttatcaagatgttggtgtctcactgaattgccagtacatatgggaaatttaatcaacttatgtcaccttgatataagt |
338 |
Q |
| |
|
|||||||| || ||| ||||||||||||| ||| ||||||| ||||||||| ||| ||| ||||||||||||||||| |
|
|
| T |
57226 |
aatttatcaaactgctggagtctcactgaatttccaatacatattggaaatttagtcagtttacgtcaccttgatataagt |
57146 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 70 - 371
Target Start/End: Original strand, 29837706 - 29838007
Alignment:
| Q |
70 |
aggtggttgttgatttgctaccaacactcaaaaggttgcatgtgttatcgctatcaaagtatacaaacatcttcgagctaccagattcaattggcaattt |
169 |
Q |
| |
|
|||||||||||||||| |||| || |||| || ||| ||||||||||||||||||||||| ||| || | ||||||| |||||| ||| || ||| |
|
|
| T |
29837706 |
aggtggttgttgatttattacccactctcattagactgcgtgtgttatcgctatcaaagtatagaaatgtcaccaagctaccggattcacttgacacttt |
29837805 |
T |
|
| Q |
170 |
ggtgcaattgcgatatctagatctctcctccactaatatcaaaagcttgcctgatacaatatgcaacctttacaatttgcaaaccttgcttttatcaaga |
269 |
Q |
| |
|
| ||||||| | ||||||||||| ||| ||| | |||||||| |||||| |||||||| ||||| |||||||||||||||||| |||||||| |
|
|
| T |
29837806 |
gacgcaattgaggtatctagatctttccaacacaagaatcaaaagtttgcctagcacaatatgtaacctatacaatttgcaaaccttgattttatcatat |
29837905 |
T |
|
| Q |
270 |
tgttggtgtctcactgaattgccagtacatatgggaaatttaatcaacttatgtcaccttgatataagttctacggatataaaggagttgccaatggaaa |
369 |
Q |
| |
|
|||| |||||||||| |||||| |||||| |||| || ||||| ||| ||||||||||||| ||| || ||||||| |||||||||||| ||| |
|
|
| T |
29837906 |
tgttatcgtctcactgatttgccaacacatattggaatgttgatcaatttacgtcaccttgatattagtgggacaaatataaaagagttgccaatgcaaa |
29838005 |
T |
|
| Q |
370 |
tt |
371 |
Q |
| |
|
|| |
|
|
| T |
29838006 |
tt |
29838007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 70 - 367
Target Start/End: Complemental strand, 31678736 - 31678439
Alignment:
| Q |
70 |
aggtggttgttgatttgctaccaacactcaaaaggttgcatgtgttatcgctatcaaagtatacaaacatcttcgagctaccagattcaattggcaattt |
169 |
Q |
| |
|
|||| |||| |||| || |||| ||||| | |||||||| |||||||||| |||| |||| ||||||| | |||||| ||||||||||||| ||| |
|
|
| T |
31678736 |
aggttgttgatgatgtgatacccacacttagaaggttgcgtgtgttatcgttatctggttatagaaacatcgccatgctaccggattcaattggcagttt |
31678637 |
T |
|
| Q |
170 |
ggtgcaattgcgatatctagatctctcctccactaatatcaaaagcttgcctgatacaatatgcaacctttacaatttgcaaaccttgcttttatcaaga |
269 |
Q |
| |
|
|||||| ||||| ||||| ||||| ||| ||| | || |||||||||||||||||| ||| |||||| ||||||||||||| ||| |||||||| |
|
|
| T |
31678636 |
ggtgcagttgcggtatcttgatctatccaacaccagaattgaaagcttgcctgatacaacatgtaaccttcacaatttgcaaacattgattttatcatat |
31678537 |
T |
|
| Q |
270 |
tgttggtgtctcactgaattgccagtacatatgggaaatttaatcaacttatgtcaccttgatataagttctacggatataaaggagttgccaatgga |
367 |
Q |
| |
|
|| | ||||| |||||| || |||||||| ||||| ||||| || ||| ||||||| ||||| | | ||| | ||||||||| |||||||||| |
|
|
| T |
31678536 |
tgctatcatctcattgaattaccggtacatattggaaagttaattaatttacgtcacctagatattaactggacgaacataaaggagatgccaatgga |
31678439 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 371
Target Start/End: Complemental strand, 144799 - 144638
Alignment:
| Q |
210 |
aaaagcttgcctgatacaatatgcaacctttacaatttgcaaaccttgcttttatcaagatgttggtgtctcactgaattgccagtacatatgggaaatt |
309 |
Q |
| |
|
|||||||| ||| || ||| |||||| ||||||||| ||||||||||| |||| || |||| |||||||| |||||| ||||| | ||||| | |
|
|
| T |
144799 |
aaaagcttacctaatgcaacatgcaatctttacaatctgcaaaccttgaatttaacacaatgtgaaaacctcactgagttgccactacattttggaaagt |
144700 |
T |
|
| Q |
310 |
taatcaacttatgtcaccttgatataagttctacggatataaaggagttgccaatggaaatt |
371 |
Q |
| |
|
|||| |||||| | ||||||||||| ||| || ||||||||||| |||||||| ||||| |
|
|
| T |
144699 |
taattaacttacggcaccttgatattagtaagacaaatataaaggagatgccaatgcaaatt |
144638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 371
Target Start/End: Complemental strand, 153104 - 152943
Alignment:
| Q |
210 |
aaaagcttgcctgatacaatatgcaacctttacaatttgcaaaccttgcttttatcaagatgttggtgtctcactgaattgccagtacatatgggaaatt |
309 |
Q |
| |
|
|||||||| ||| || ||| |||||| ||||||||| ||||||||||| |||| || |||| |||||||| |||||| ||||| | ||||| | |
|
|
| T |
153104 |
aaaagcttacctaatgcaacatgcaatctttacaatctgcaaaccttgaatttaacacaatgtgaaaacctcactgagttgccactacattttggaaagt |
153005 |
T |
|
| Q |
310 |
taatcaacttatgtcaccttgatataagttctacggatataaaggagttgccaatggaaatt |
371 |
Q |
| |
|
|||| |||||| | ||||||||||| ||| || ||||||||||| |||||||| ||||| |
|
|
| T |
153004 |
taattaacttacggcaccttgatattagtaagacaaatataaaggagatgccaatgcaaatt |
152943 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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