View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0304_1D_low_21 (Length: 251)

Name: NF0304_1D_low_21
Description: NF0304_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0304_1D_low_21
NF0304_1D_low_21
[»] chr8 (36 HSPs)
chr8 (18-251)||(7008419-7008656)
chr8 (62-162)||(4558681-4558783)
chr8 (62-162)||(14482085-14482187)
chr8 (62-162)||(41336730-41336832)
chr8 (60-167)||(2364556-2364665)
chr8 (70-165)||(12972736-12972833)
chr8 (64-162)||(29699137-29699237)
chr8 (64-158)||(34563137-34563233)
chr8 (83-162)||(43208239-43208320)
chr8 (69-105)||(3936791-3936827)
chr8 (68-157)||(35453714-35453805)
chr8 (117-158)||(6950223-6950264)
chr8 (64-105)||(39392748-39392789)
chr8 (126-170)||(9912993-9913037)
chr8 (62-105)||(1470941-1470984)
chr8 (62-105)||(37152975-37153018)
chr8 (62-105)||(42597343-42597386)
chr8 (62-108)||(3537116-3537162)
chr8 (123-153)||(31862341-31862371)
chr8 (128-162)||(44865718-44865752)
chr8 (67-161)||(5226486-5226582)
chr8 (117-162)||(8062123-8062168)
chr8 (62-103)||(11000646-11000687)
chr8 (64-162)||(11119086-11119186)
chr8 (124-169)||(26055961-26056006)
chr8 (68-105)||(26215438-26215475)
chr8 (117-162)||(26499596-26499641)
chr8 (117-162)||(31884477-31884522)
chr8 (64-162)||(35869720-35869820)
chr8 (62-94)||(8062268-8062300)
chr8 (124-168)||(8194087-8194131)
chr8 (132-168)||(8536205-8536241)
chr8 (64-96)||(8799356-8799388)
chr8 (126-162)||(10722514-10722550)
chr8 (64-96)||(26820150-26820182)
chr8 (64-96)||(40728505-40728537)
[»] chr5 (43 HSPs)
chr5 (65-162)||(20982223-20982322)
chr5 (70-162)||(26516181-26516275)
chr5 (65-162)||(32172536-32172635)
chr5 (64-162)||(39257473-39257573)
chr5 (64-168)||(6739749-6739855)
chr5 (66-162)||(29115302-29115400)
chr5 (64-105)||(7096214-7096255)
chr5 (125-162)||(30585330-30585367)
chr5 (64-105)||(37063161-37063202)
chr5 (62-167)||(39128517-39128624)
chr5 (126-161)||(4273523-4273558)
chr5 (125-168)||(6725114-6725157)
chr5 (62-97)||(10303751-10303786)
chr5 (64-162)||(11040928-11041027)
chr5 (126-169)||(12521442-12521485)
chr5 (62-97)||(35095868-35095903)
chr5 (126-160)||(10296315-10296349)
chr5 (120-158)||(32222901-32222939)
chr5 (128-162)||(37873987-37874021)
chr5 (128-162)||(40336024-40336058)
chr5 (133-162)||(1550811-1550840)
chr5 (125-162)||(4855596-4855633)
chr5 (133-162)||(7026411-7026440)
chr5 (62-103)||(7853602-7853643)
chr5 (65-110)||(11095557-11095602)
chr5 (62-103)||(11615452-11615493)
chr5 (65-102)||(11667108-11667145)
chr5 (68-105)||(12407752-12407789)
chr5 (64-97)||(14295456-14295489)
chr5 (125-162)||(14716620-14716657)
chr5 (125-162)||(23137365-23137402)
chr5 (64-97)||(28586853-28586886)
chr5 (117-162)||(28981889-28981934)
chr5 (72-162)||(33961586-33961678)
chr5 (64-105)||(35135749-35135790)
chr5 (125-162)||(39750022-39750059)
chr5 (117-162)||(41052773-41052818)
chr5 (126-162)||(14331237-14331273)
chr5 (65-105)||(28578834-28578874)
chr5 (64-96)||(29117017-29117049)
chr5 (65-97)||(29590828-29590860)
chr5 (62-94)||(32969202-32969234)
chr5 (123-167)||(39823270-39823314)
[»] scaffold0590 (1 HSPs)
scaffold0590 (64-160)||(1161-1259)
[»] scaffold0275 (1 HSPs)
scaffold0275 (64-160)||(2716-2814)
[»] chr7 (40 HSPs)
chr7 (61-167)||(7100703-7100809)
chr7 (65-162)||(30133934-30134031)
chr7 (64-168)||(31341071-31341177)
chr7 (64-162)||(27481381-27481481)
chr7 (64-168)||(28340483-28340589)
chr7 (64-162)||(753291-753391)
chr7 (44-157)||(43318591-43318704)
chr7 (64-154)||(47003978-47004070)
chr7 (61-158)||(7453482-7453581)
chr7 (62-162)||(49060423-49060525)
chr7 (117-162)||(5630057-5630102)
chr7 (63-103)||(42656459-42656499)
chr7 (62-106)||(43152987-43153031)
chr7 (126-166)||(46281354-46281394)
chr7 (62-105)||(1417206-1417249)
chr7 (125-168)||(5620244-5620287)
chr7 (66-105)||(28178911-28178950)
chr7 (62-105)||(30496646-30496689)
chr7 (62-105)||(35536049-35536092)
chr7 (133-167)||(657842-657876)
chr7 (70-104)||(2767271-2767305)
chr7 (118-160)||(28844371-28844413)
chr7 (62-160)||(36532239-36532336)
chr7 (62-96)||(39591552-39591586)
chr7 (62-96)||(47046193-47046227)
chr7 (64-97)||(2999141-2999174)
chr7 (64-105)||(5006596-5006637)
chr7 (125-162)||(28702640-28702677)
chr7 (64-105)||(35808991-35809032)
chr7 (133-162)||(39539904-39539933)
chr7 (126-162)||(1083872-1083908)
chr7 (65-105)||(1418373-1418413)
chr7 (62-102)||(1792438-1792478)
chr7 (73-138)||(2013106-2013173)
chr7 (110-162)||(2221848-2221900)
chr7 (126-162)||(2380226-2380262)
chr7 (63-148)||(8445183-8445270)
chr7 (126-162)||(22388055-22388091)
chr7 (69-105)||(24975846-24975882)
chr7 (114-162)||(29290253-29290301)
[»] chr4 (39 HSPs)
chr4 (48-161)||(22684583-22684702)
chr4 (62-169)||(485957-486067)
chr4 (67-162)||(24929376-24929473)
chr4 (62-157)||(30024588-30024685)
chr4 (66-162)||(8422926-8423024)
chr4 (117-164)||(41162195-41162242)
chr4 (64-105)||(51044546-51044587)
chr4 (114-158)||(2726400-2726444)
chr4 (117-161)||(18512561-18512605)
chr4 (127-167)||(21043366-21043406)
chr4 (62-97)||(4071832-4071867)
chr4 (62-105)||(6364091-6364134)
chr4 (127-162)||(23525717-23525752)
chr4 (62-105)||(24160932-24160975)
chr4 (82-162)||(41241649-41241731)
chr4 (117-168)||(42865997-42866048)
chr4 (117-162)||(4243223-4243269)
chr4 (110-168)||(10812378-10812436)
chr4 (117-167)||(33640986-33641036)
chr4 (62-104)||(34368820-34368862)
chr4 (126-160)||(40709531-40709565)
chr4 (46-97)||(41701506-41701561)
chr4 (44-155)||(55437349-55437464)
chr4 (123-157)||(55599054-55599088)
chr4 (133-162)||(6427917-6427946)
chr4 (64-97)||(20936089-20936122)
chr4 (64-162)||(24443921-24444021)
chr4 (64-101)||(32724065-32724102)
chr4 (64-105)||(36734835-36734876)
chr4 (128-165)||(46053580-46053617)
chr4 (64-105)||(47970260-47970301)
chr4 (64-105)||(54325124-54325165)
chr4 (126-162)||(3805184-3805220)
chr4 (61-93)||(11802488-11802520)
chr4 (117-157)||(14171973-14172013)
chr4 (65-105)||(21593099-21593139)
chr4 (61-105)||(35958597-35958641)
chr4 (62-102)||(42321964-42322004)
chr4 (65-105)||(54277402-54277442)
[»] chr1 (32 HSPs)
chr1 (62-168)||(49516946-49517055)
chr1 (62-157)||(3224311-3224408)
chr1 (64-162)||(23895219-23895319)
chr1 (117-162)||(29666452-29666497)
chr1 (62-105)||(40357971-40358014)
chr1 (84-162)||(49175511-49175590)
chr1 (124-162)||(16322725-16322763)
chr1 (120-164)||(29794067-29794111)
chr1 (118-162)||(49365931-49365975)
chr1 (65-105)||(50319234-50319274)
chr1 (124-164)||(52542445-52542485)
chr1 (62-105)||(12519055-12519098)
chr1 (64-158)||(15565919-15566014)
chr1 (119-162)||(24263283-24263326)
chr1 (62-105)||(36151590-36151633)
chr1 (62-96)||(14737790-14737824)
chr1 (124-162)||(29415858-29415896)
chr1 (124-162)||(30237895-30237933)
chr1 (62-96)||(36641826-36641860)
chr1 (117-167)||(48133081-48133131)
chr1 (124-158)||(49173292-49173326)
chr1 (117-162)||(12477428-12477473)
chr1 (125-162)||(15514933-15514970)
chr1 (62-95)||(36496570-36496603)
chr1 (117-162)||(36653331-36653376)
chr1 (64-101)||(42351993-42352030)
chr1 (123-160)||(44936738-44936775)
chr1 (64-105)||(45999375-45999416)
chr1 (62-103)||(46499939-46499980)
chr1 (64-96)||(15360845-15360877)
chr1 (125-161)||(22813759-22813795)
chr1 (62-106)||(38578468-38578512)
[»] chr6 (39 HSPs)
chr6 (68-161)||(2206474-2206569)
chr6 (71-171)||(33068655-33068757)
chr6 (64-162)||(3155059-3155159)
chr6 (125-162)||(4247234-4247271)
chr6 (125-160)||(4003750-4003785)
chr6 (62-162)||(7713908-7714010)
chr6 (117-160)||(9833239-9833282)
chr6 (74-162)||(31461561-31461651)
chr6 (65-163)||(740953-741056)
chr6 (124-162)||(9041566-9041604)
chr6 (62-133)||(22742278-22742351)
chr6 (64-167)||(32975856-32975961)
chr6 (62-152)||(8349749-8349841)
chr6 (126-162)||(14340954-14340990)
chr6 (118-161)||(7268042-7268085)
chr6 (62-105)||(24836284-24836327)
chr6 (82-162)||(28130030-28130112)
chr6 (62-105)||(29269838-29269881)
chr6 (62-105)||(29274314-29274357)
chr6 (62-161)||(3217275-3217376)
chr6 (62-96)||(4006665-4006699)
chr6 (64-105)||(2514644-2514685)
chr6 (62-103)||(4248902-4248943)
chr6 (121-162)||(4324575-4324616)
chr6 (64-105)||(4420559-4420600)
chr6 (127-168)||(7480265-7480306)
chr6 (125-162)||(30004785-30004822)
chr6 (64-97)||(30865432-30865465)
chr6 (133-162)||(31807984-31808013)
chr6 (125-162)||(33818102-33818139)
chr6 (133-162)||(34404321-34404350)
chr6 (126-162)||(2785819-2785855)
chr6 (126-162)||(4046203-4046239)
chr6 (64-96)||(5328925-5328957)
chr6 (117-161)||(6078431-6078475)
chr6 (129-161)||(8817107-8817139)
chr6 (62-110)||(20671950-20671998)
chr6 (126-158)||(32408833-32408865)
chr6 (117-161)||(32917107-32917151)
[»] scaffold0024 (1 HSPs)
scaffold0024 (62-167)||(27454-27561)
[»] chr3 (31 HSPs)
chr3 (124-168)||(37308214-37308258)
chr3 (64-162)||(43116515-43116615)
chr3 (62-105)||(1395613-1395656)
chr3 (62-168)||(22214766-22214874)
chr3 (117-162)||(23785136-23785181)
chr3 (126-163)||(34857393-34857430)
chr3 (125-162)||(50399505-50399542)
chr3 (65-105)||(42084339-42084379)
chr3 (44-105)||(42809243-42809308)
chr3 (117-161)||(44240047-44240091)
chr3 (65-104)||(905058-905097)
chr3 (62-105)||(2128336-2128379)
chr3 (126-169)||(2621068-2621111)
chr3 (61-104)||(34318031-34318074)
chr3 (64-103)||(49587003-49587042)
chr3 (119-162)||(52324021-52324064)
chr3 (124-162)||(24235817-24235855)
chr3 (62-96)||(26990685-26990719)
chr3 (64-105)||(20192693-20192734)
chr3 (64-105)||(22232768-22232809)
chr3 (125-162)||(24625392-24625429)
chr3 (68-105)||(35394792-35394829)
chr3 (64-105)||(40122839-40122880)
chr3 (62-102)||(15304432-15304472)
chr3 (126-162)||(20874451-20874487)
chr3 (126-162)||(21574375-21574411)
chr3 (126-158)||(22723949-22723981)
chr3 (62-94)||(25195377-25195409)
chr3 (65-105)||(41028939-41028979)
chr3 (62-110)||(48364964-48365012)
chr3 (64-96)||(54775079-54775111)
[»] chr2 (31 HSPs)
chr2 (62-158)||(31461325-31461423)
chr2 (64-162)||(32098395-32098498)
chr2 (62-137)||(35459818-35459895)
chr2 (69-162)||(5133654-5133750)
chr2 (126-168)||(5752751-5752793)
chr2 (125-162)||(9477862-9477899)
chr2 (64-103)||(17952788-17952827)
chr2 (62-105)||(40837513-40837556)
chr2 (123-162)||(40851478-40851517)
chr2 (117-148)||(42817518-42817549)
chr2 (124-162)||(5942808-5942846)
chr2 (66-161)||(10198567-10198664)
chr2 (108-162)||(14316952-14317006)
chr2 (124-162)||(15171133-15171171)
chr2 (46-105)||(33267581-33267644)
chr2 (120-158)||(39866476-39866514)
chr2 (70-162)||(3080281-3080374)
chr2 (46-96)||(3458608-3458662)
chr2 (125-162)||(7936924-7936961)
chr2 (125-162)||(29316925-29316962)
chr2 (64-105)||(37033986-37034027)
chr2 (64-105)||(38239638-38239679)
chr2 (62-103)||(40758967-40759008)
chr2 (64-162)||(42974235-42974335)
chr2 (65-105)||(5045245-5045285)
chr2 (62-94)||(6988068-6988100)
chr2 (139-167)||(15203829-15203857)
chr2 (65-105)||(25609738-25609778)
chr2 (64-136)||(25790037-25790109)
chr2 (134-162)||(34005869-34005897)
chr2 (133-169)||(40722618-40722654)
[»] scaffold0085 (1 HSPs)
scaffold0085 (124-167)||(26190-26233)
[»] scaffold0110 (2 HSPs)
scaffold0110 (125-162)||(34062-34099)
scaffold0110 (64-103)||(4310-4350)
[»] scaffold0455 (1 HSPs)
scaffold0455 (82-162)||(8617-8699)
[»] scaffold0426 (1 HSPs)
scaffold0426 (125-162)||(4026-4063)
[»] scaffold0091 (1 HSPs)
scaffold0091 (67-161)||(5903-5999)


Alignment Details
Target: chr8 (Bit Score: 188; Significance: 1e-102; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 18 - 251
Target Start/End: Complemental strand, 7008656 - 7008419
Alignment:
Q  18 agatatttttagcttactttcataagtgaaaacagcttatatgaaatttgactttattttatcctttgttatagaaatagattatacaaaatcttttacg 117  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |    
T  7008656 agatatttttagcttattttcataagcgaaaacagcttatatgaaatttgactttattttatccattgttatagaaatagattatacaaaatcttttatg 7008557  T
Q  118 ataaacgcttatgctataagcacttaattaagttgtttatcca-aaaagggctagtctattat---taacctttttcttacaataataagaatgatacta 213  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||   |||| |||||||||||||||||||||||||| ||    
T  7008556 ataaacgcttatgctataagcgcttaattaagttgtttatccaaaaaagggctagtctattattaataacttttttcttacaataataagaatgataata 7008457  T
Q  214 acttacctcagagttgatatcaattccgatctcatcaa 251  Q
    ||||||||||||||||||||||||||||||||||||||    
T  7008456 acttacctcagagttgatatcaattccgatctcatcaa 7008419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 4558783 - 4558681
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaatagattatacaaaatcttttacg--ataaacgcttatgctataagcacttaattaagttgtttatcc 159  Q
    ||||| ||||||||||||| ||| |||||||||||| ||||||| || |  ||||   ||||||| ||||||||||||| | ||||||||||||||||||    
T  4558783 aatttaactttattttatcttttattatagaaatagcttatacataaacacttacataataaacgtttatgctataagcgcgtaattaagttgtttatcc 4558684  T
Q  160 aaa 162  Q
    |||    
T  4558683 aaa 4558681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 14482187 - 14482085
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaatagattatacaaaa--tcttttacgataaacgcttatgctataagcacttaattaagttgtttatcc 159  Q
    ||||||||||||||||||| |||||||||||||||| ||||||| ||   ||| || ||||| | || |||||||||| |||||||||| |||||||| |    
T  14482187 aatttgactttattttatcttttgttatagaaatagtttatacataagcacttatatgataagcactaatgctataagaacttaattaaattgtttattc 14482088  T
Q  160 aaa 162  Q
    |||    
T  14482087 aaa 14482085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 62 - 162
Target Start/End: Original strand, 41336730 - 41336832
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaatagattatacaaaatcttttac--gataaacgcttatgctataagcacttaattaagttgtttatcc 159  Q
    ||||||||| ||||||||| ||||| ||| ||||   ||||||| || | ||||   ||||||||||||||||||||||| |||||||||||||||||||    
T  41336730 aatttgactatattttatcttttgtcataaaaatgatttatacataagcatttatttgataaacgcttatgctataagcaattaattaagttgtttatcc 41336829  T
Q  160 aaa 162  Q
    |||    
T  41336830 aaa 41336832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 60 - 167
Target Start/End: Original strand, 2364556 - 2364665
Alignment:
Q  60 gaaatttgactttattttatcctttgttatagaaatagattataca-aaatcttt-tacgataaacgcttatgctataagcacttaattaagttgtttat 157  Q
    ||||||||||||||||||||| |||| |||| ||||||  |||||| ||||  || || ||||||| |||||||||||||| ||||| || |||||||||    
T  2364556 gaaatttgactttattttatcttttgctataaaaatagcgtatacataaatagttatatgataaacacttatgctataagcgcttaactatgttgtttat 2364655  T
Q  158 ccaaaaaggg 167  Q
    ||||| ||||    
T  2364656 ccaaacaggg 2364665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 70 - 165
Target Start/End: Complemental strand, 12972833 - 12972736
Alignment:
Q  70 tttattttatcctttgttatagaaatagattatacaaaatc--ttttacgataaacgcttatgctataagcacttaattaagttgtttatccaaaaag 165  Q
    ||||||| ||| | |||||| ||||||| ||||||| || |  || || |||||| ||||||||||||||| |||||||||||||||| |||||||||    
T  12972833 tttatttcatcttctgttattgaaatagcttatacataagcacttatatgataaatgcttatgctataagcgcttaattaagttgtttgtccaaaaag 12972736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 162
Target Start/End: Complemental strand, 29699237 - 29699137
Alignment:
Q  64 tttgactttattttatcctttgttatagaaatagattatacaaaatcttttac--gataaacgcttatgctataagcacttaattaagttgtttatccaa 161  Q
    ||||||||||||||||| |||||||||||||||  || |||| || | ||||   ||||||   ||||||||||||||||||| ||||| ||||||||||    
T  29699237 tttgactttattttatcttttgttatagaaataacttgtacataagcatttatatgataaatatttatgctataagcacttaactaagtcgtttatccaa 29699138  T
Q  162 a 162  Q
    |    
T  29699137 a 29699137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 158
Target Start/End: Complemental strand, 34563233 - 34563137
Alignment:
Q  64 tttgactttattttatcctttgttatagaaatagattatacaaaa--tcttttacgataaacgcttatgctataagcacttaattaagttgtttatc 158  Q
    ||||||||||||||||||||||| |||||||||  ||||| | ||   ||| || |||||| | |||||||||||||  ||||||||||||||||||    
T  34563233 tttgactttattttatcctttgtcatagaaataacttatatataagcacttatatgataaatgtttatgctataagcgtttaattaagttgtttatc 34563137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 43208239 - 43208320
Alignment:
Q  83 ttgttatagaaatagattataca-aaat-cttttacgataaacgcttatgctataagcacttaattaagttgtttatccaaa 162  Q
    ||||||||||||||| ||||||| |||| ||| || ||| |||| |||| ||||||||||||||||||||||||||| ||||    
T  43208239 ttgttatagaaatagcttatacataaatacttatatgatgaacgtttatactataagcacttaattaagttgtttatacaaa 43208320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 105
Target Start/End: Complemental strand, 3936827 - 3936791
Alignment:
Q  69 ctttattttatcctttgttatagaaatagattataca 105  Q
    |||||||||||||||||||||||||||||||||||||    
T  3936827 ctttattttatcctttgttatagaaatagattataca 3936791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 157
Target Start/End: Original strand, 35453714 - 35453805
Alignment:
Q  68 actttattttatcctttgttatagaaatagattatacaaaat--cttttacgataaacgcttatgctataagcacttaattaagttgtttat 157  Q
    ||||||||||||| |||||| |||||| |||||||| | ||   ||| || || || |||||||||||||| ||||||||||||||||||||    
T  35453714 actttattttatcttttgttgtagaaacagattatatataagtacttatatgacaagcgcttatgctataatcacttaattaagttgtttat 35453805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 158
Target Start/End: Complemental strand, 6950264 - 6950223
Alignment:
Q  117 gataaacgcttatgctataagcacttaattaagttgtttatc 158  Q
    ||||| || |||||||||||||||||||||||||||||||||    
T  6950264 gataagcgtttatgctataagcacttaattaagttgtttatc 6950223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 39392748 - 39392789
Alignment:
Q  64 tttgactttattttatcctttgttatagaaatagattataca 105  Q
    ||||||||||||||||| |||||||||||||||| |||||||    
T  39392748 tttgactttattttatcttttgttatagaaatagtttataca 39392789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 170
Target Start/End: Original strand, 9912993 - 9913037
Alignment:
Q  126 ttatgctataagcacttaattaagttgtttatccaaaaagggcta 170  Q
    ||||||||||||||||||||||| ||||| ||||||| |||||||    
T  9912993 ttatgctataagcacttaattaatttgttcatccaaacagggcta 9913037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 105
Target Start/End: Original strand, 1470941 - 1470984
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaatagattataca 105  Q
    ||||||||||||||||||| ||| |||||||||||| |||||||    
T  1470941 aatttgactttattttatcttttattatagaaatagcttataca 1470984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 105
Target Start/End: Original strand, 37152975 - 37153018
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaatagattataca 105  Q
    ||||| |||||||||||| |||||||||||||||| ||||||||    
T  37152975 aatttaactttattttatactttgttatagaaatatattataca 37153018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 105
Target Start/End: Complemental strand, 42597386 - 42597343
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaatagattataca 105  Q
    ||||| ||||||||||||| |||||||||||||||| |||||||    
T  42597386 aattttactttattttatcttttgttatagaaatagcttataca 42597343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 108
Target Start/End: Original strand, 3537116 - 3537162
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaatagattatacaaaa 108  Q
    ||||||||||||||||||| |||| ||||||||| | ||||||||||    
T  3537116 aatttgactttattttatcttttgctatagaaattgcttatacaaaa 3537162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 153
Target Start/End: Complemental strand, 31862371 - 31862341
Alignment:
Q  123 cgcttatgctataagcacttaattaagttgt 153  Q
    |||||||||||||||||||||||||||||||    
T  31862371 cgcttatgctataagcacttaattaagttgt 31862341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 162
Target Start/End: Original strand, 44865718 - 44865752
Alignment:
Q  128 atgctataagcacttaattaagttgtttatccaaa 162  Q
    |||||||||||| ||||||||||||||||||||||    
T  44865718 atgctataagcatttaattaagttgtttatccaaa 44865752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 161
Target Start/End: Complemental strand, 5226582 - 5226486
Alignment:
Q  67 gactttattttatcctttgttatagaaatagattatacaaaatc--ttttacgataaacgcttatgctataagcacttaattaagttgtttatccaa 161  Q
    ||||| |||||||| |||||||| ||||| | ||||||| || |  || || |||||| | ||||||||||| || || ||||||||||||||||||    
T  5226582 gacttgattttatcttttgttattgaaattgtttatacataaacacttatatgataaatgtttatgctataaacagttgattaagttgtttatccaa 5226486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 162
Target Start/End: Complemental strand, 8062168 - 8062123
Alignment:
Q  117 gataaacgcttatgctataagcacttaattaagttgtttatccaaa 162  Q
    |||||||||||||  ||||||| ||||||||||||| |||||||||    
T  8062168 gataaacgcttatagtataagcgcttaattaagttgcttatccaaa 8062123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 103
Target Start/End: Original strand, 11000646 - 11000687
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaatagattata 103  Q
    ||||||||||||||||||| |||||||| ||||||| |||||    
T  11000646 aatttgactttattttatcttttgttatggaaatagcttata 11000687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 162
Target Start/End: Original strand, 11119086 - 11119186
Alignment:
Q  64 tttgactttattttatcctttgttatagaaatagattatacaaaatc--ttttacgataaacgcttatgctataagcacttaattaagttgtttatccaa 161  Q
    ||||||||||||||||| |||||||||||||||   |||||| || |  || || ||||     ||||||||||| |||||||| |||||||||||||||    
T  11119086 tttgactttattttatcttttgttatagaaatatcgtatacataagcgattatatgatatgtagttatgctataaacacttaatcaagttgtttatccaa 11119185  T
Q  162 a 162  Q
    |    
T  11119186 a 11119186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 169
Target Start/End: Complemental strand, 26056006 - 26055961
Alignment:
Q  124 gcttatgctataagcacttaattaagttgtttatccaaaaagggct 169  Q
    ||||||||||||||| | ||||||||||||| ||||||| ||||||    
T  26056006 gcttatgctataagcgcgtaattaagttgttgatccaaacagggct 26055961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 105
Target Start/End: Complemental strand, 26215475 - 26215438
Alignment:
Q  68 actttattttatcctttgttatagaaatagattataca 105  Q
    ||||||||||||| |||||||||||||||| |||||||    
T  26215475 actttattttatcttttgttatagaaatagcttataca 26215438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 162
Target Start/End: Complemental strand, 26499641 - 26499596
Alignment:
Q  117 gataaacgcttatgctataagcacttaattaagttgtttatccaaa 162  Q
    ||||| |||||||| | |||||||||||||||||||||||| ||||    
T  26499641 gataagcgcttatgttttaagcacttaattaagttgtttattcaaa 26499596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 162
Target Start/End: Complemental strand, 31884522 - 31884477
Alignment:
Q  117 gataaacgcttatgctataagcacttaattaagttgtttatccaaa 162  Q
    ||||| |||||||||||||||  ||||||| |||||||||||||||    
T  31884522 gataagcgcttatgctataagtgcttaattgagttgtttatccaaa 31884477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 162
Target Start/End: Complemental strand, 35869820 - 35869720
Alignment:
Q  64 tttgactttattttatcctttgttatagaaatagattatacaaaat--cttttacgataaacgcttatgctataagcacttaattaagttgtttatccaa 161  Q
    ||||| ||||||||||  |||||| ||||||| | ||||||| ||   ||| || |||||  ||||||||||||||| |||||| ||||||| |||||||    
T  35869820 tttgaatttattttatattttgttgtagaaatcgcttatacataagaacttatatgataagtgcttatgctataagcgcttaataaagttgtgtatccaa 35869721  T
Q  162 a 162  Q
    |    
T  35869720 a 35869720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 94
Target Start/End: Complemental strand, 8062300 - 8062268
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaa 94  Q
    ||||||||||||||||||| |||||||||||||    
T  8062300 aatttgactttattttatcatttgttatagaaa 8062268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 168
Target Start/End: Original strand, 8194087 - 8194131
Alignment:
Q  124 gcttatgctataagcacttaattaagttgtttatccaaaaagggc 168  Q
    ||||||||||||||  ||||||||||||||||||| ||| |||||    
T  8194087 gcttatgctataagggcttaattaagttgtttatctaaacagggc 8194131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 168
Target Start/End: Original strand, 8536205 - 8536241
Alignment:
Q  132 tataagcacttaattaagttgtttatccaaaaagggc 168  Q
    |||||||||| |||||||||||||||||||| |||||    
T  8536205 tataagcactcaattaagttgtttatccaaacagggc 8536241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 96
Target Start/End: Complemental strand, 8799388 - 8799356
Alignment:
Q  64 tttgactttattttatcctttgttatagaaata 96  Q
    ||||||||||||||||| |||||||||||||||    
T  8799388 tttgactttattttatcttttgttatagaaata 8799356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 10722550 - 10722514
Alignment:
Q  126 ttatgctataagcacttaattaagttgtttatccaaa 162  Q
    ||||||| ||||| |||||||||||||||||||||||    
T  10722550 ttatgctttaagcgcttaattaagttgtttatccaaa 10722514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 96
Target Start/End: Complemental strand, 26820182 - 26820150
Alignment:
Q  64 tttgactttattttatcctttgttatagaaata 96  Q
    ||||||||||||||||| |||||||||||||||    
T  26820182 tttgactttattttatcttttgttatagaaata 26820150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 96
Target Start/End: Original strand, 40728505 - 40728537
Alignment:
Q  64 tttgactttattttatcctttgttatagaaata 96  Q
    ||||||||||||||||| |||||||||||||||    
T  40728505 tttgactttattttatcttttgttatagaaata 40728537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 7e-24; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 65 - 162
Target Start/End: Original strand, 20982223 - 20982322
Alignment:
Q  65 ttgactttattttatcctttgttatagaaatagattatacaaaa--tcttttacgataaacgcttatgctataagcacttaattaagttgtttatccaaa 162  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||   ||| || ||||| | ||||||||||||||||||||| ||||||||||||||||    
T  20982223 ttgactttattttatcctttgttatagaaatagcttatacataagcacttatatgataagcacttatgctataagcacttaatgaagttgtttatccaaa 20982322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 70 - 162
Target Start/End: Complemental strand, 26516275 - 26516181
Alignment:
Q  70 tttattttatcctttgttatagaaatagattatacaaaatc--ttttacgataaacgcttatgctataagcacttaattaagttgtttatccaaa 162  Q
    ||||||||||| |||||| ||||||||| ||||||| || |  || || ||||| |||||||||||||||| |||||||||||||||||||||||    
T  26516275 tttattttatcttttgttttagaaatagcttatacataagcacttatatgataagcgcttatgctataagcgcttaattaagttgtttatccaaa 26516181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 162
Target Start/End: Complemental strand, 32172635 - 32172536
Alignment:
Q  65 ttgactttattttatcctttgttatagaaatagattatacaaaa--tcttttacgataaacgcttatgctataagcacttaattaagttgtttatccaaa 162  Q
    ||||||| |||||||| |||||| ||||||||| ||||||| ||  |||| || ||||| |||||||||| ||||| |||||||| ||||||||||||||    
T  32172635 ttgacttcattttatcttttgttgtagaaatagtttatacataagctcttgtatgataagcgcttatgctgtaagcgcttaattatgttgtttatccaaa 32172536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 162
Target Start/End: Original strand, 39257473 - 39257573
Alignment:
Q  64 tttgactttattttatcctttgttatagaaatagattatacaaaatcttttac--gataaacgcttatgctataagcacttaattaagttgtttatccaa 161  Q
    ||||||||||||||| | ||||||||||| ||||  |||||| || |  ||||  |||||  | ||||||||||||| ||||||||||||||||||||||    
T  39257473 tttgactttattttaccttttgttatagagatagcatatacataagcacttacatgataatagtttatgctataagcgcttaattaagttgtttatccaa 39257572  T
Q  162 a 162  Q
    |    
T  39257573 a 39257573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 168
Target Start/End: Complemental strand, 6739855 - 6739749
Alignment:
Q  64 tttgactttattttatcctttgttatagaaatagattatacaaaatc--ttttacgataaacgcttatgctataagcacttaattaagttgtttatccaa 161  Q
    ||||||||||||||||| ||  ||||||||||   ||||||| || |  || || |||||||||||||| |||||||||||| || | ||||||||||||    
T  6739855 tttgactttattttatctttatttatagaaatgacttatacataaacgcttatatgataaacgcttatgatataagcacttagttcaattgtttatccaa 6739756  T
Q  162 aaagggc 168  Q
    | |||||    
T  6739755 agagggc 6739749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 29115302 - 29115400
Alignment:
Q  66 tgactttattttatcctttgttatagaaatagattatacaaaatc--ttttacgataaacgcttatgctataagcacttaattaagttgtttatccaaa 162  Q
    ||||||||||||| | |||||| ||||||||| ||||||| || |  ||||| |||||| | ||||||||||||| | |||||||  ||||||||||||    
T  29115302 tgactttattttaccttttgttgtagaaatagcttatacataagcacttttatgataaatgtttatgctataagcgcgtaattaaagtgtttatccaaa 29115400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 7096214 - 7096255
Alignment:
Q  64 tttgactttattttatcctttgttatagaaatagattataca 105  Q
    ||||||||||||||||| |||||||||||||||| |||||||    
T  7096214 tttgactttattttatcttttgttatagaaatagcttataca 7096255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 30585367 - 30585330
Alignment:
Q  125 cttatgctataagcacttaattaagttgtttatccaaa 162  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  30585367 cttatgctataagcaattaattaagttgtttatccaaa 30585330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 37063161 - 37063202
Alignment:
Q  64 tttgactttattttatcctttgttatagaaatagattataca 105  Q
    ||||||||||||||||| |||||||||||||||| |||||||    
T  37063161 tttgactttattttatcttttgttatagaaatagtttataca 37063202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 167
Target Start/End: Complemental strand, 39128624 - 39128517
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaatagattatacaaaa--tcttttacgataaacgcttatgctataagcacttaattaagttgtttatcc 159  Q
    ||||||||||||||||||| |||||||||||| ||| ||||||| ||   | | ||  | ||| ||||||||||||||| | ||| ||||||||| ||||    
T  39128624 aatttgactttattttatcttttgttatagaattagcttatacataagcacatatattaaaaaagcttatgctataagcgcataactaagttgttaatcc 39128525  T
Q  160 aaaaaggg 167  Q
    ||| ||||    
T  39128524 aaacaggg 39128517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 161
Target Start/End: Original strand, 4273523 - 4273558
Alignment:
Q  126 ttatgctataagcacttaattaagttgtttatccaa 161  Q
    |||| |||||||||||||||||||||||||||||||    
T  4273523 ttatactataagcacttaattaagttgtttatccaa 4273558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 168
Target Start/End: Complemental strand, 6725157 - 6725114
Alignment:
Q  125 cttatgctataagcacttaattaagttgtttatccaaaaagggc 168  Q
    |||||||||||||||||||||||| || |||||||||| |||||    
T  6725157 cttatgctataagcacttaattaaattatttatccaaacagggc 6725114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 97
Target Start/End: Complemental strand, 10303786 - 10303751
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaatag 97  Q
    ||||||||||||||||||| ||||||||||||||||    
T  10303786 aatttgactttattttatcttttgttatagaaatag 10303751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 162
Target Start/End: Complemental strand, 11041027 - 11040928
Alignment:
Q  64 tttgactttattttatcctttgttatagaaatagattatacaaaat-cttttacgataaacgcttatgctataagcacttaattaagttgtttatccaaa 162  Q
    ||||||||||||||||| |||||||||||||| | |||| || ||  |||  | |||||    |||||||||| || |||||||||||||||||||||||    
T  11041027 tttgactttattttatcgtttgttatagaaatgggttatccataacacttgcatgataagaatttatgctataggcgcttaattaagttgtttatccaaa 11040928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 169
Target Start/End: Complemental strand, 12521485 - 12521442
Alignment:
Q  126 ttatgctataagcacttaattaagttgtttatccaaaaagggct 169  Q
    |||||||| ||||||||||||||| |||||||||||| ||||||    
T  12521485 ttatgctaaaagcacttaattaagctgtttatccaaacagggct 12521442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 97
Target Start/End: Original strand, 35095868 - 35095903
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaatag 97  Q
    ||||||||||||||||||| ||||||||||||||||    
T  35095868 aatttgactttattttatcttttgttatagaaatag 35095903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 160
Target Start/End: Complemental strand, 10296349 - 10296315
Alignment:
Q  126 ttatgctataagcacttaattaagttgtttatcca 160  Q
    |||||||||||||||||||||| ||||||||||||    
T  10296349 ttatgctataagcacttaattatgttgtttatcca 10296315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 158
Target Start/End: Complemental strand, 32222939 - 32222901
Alignment:
Q  120 aaacgcttatgctataagcacttaattaagttgtttatc 158  Q
    |||||||||| ||||||||||||||||||| ||||||||    
T  32222939 aaacgcttatactataagcacttaattaagctgtttatc 32222901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 162
Target Start/End: Original strand, 37873987 - 37874021
Alignment:
Q  128 atgctataagcacttaattaagttgtttatccaaa 162  Q
    ||||||||||||||||||||||| |||||||||||    
T  37873987 atgctataagcacttaattaagtggtttatccaaa 37874021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 162
Target Start/End: Original strand, 40336024 - 40336058
Alignment:
Q  128 atgctataagcacttaattaagttgtttatccaaa 162  Q
    ||||||||||||| |||||||||||||||||||||    
T  40336024 atgctataagcacataattaagttgtttatccaaa 40336058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 162
Target Start/End: Complemental strand, 1550840 - 1550811
Alignment:
Q  133 ataagcacttaattaagttgtttatccaaa 162  Q
    ||||||||||||||||||||||||||||||    
T  1550840 ataagcacttaattaagttgtttatccaaa 1550811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 4855633 - 4855596
Alignment:
Q  125 cttatgctataagcacttaattaagttgtttatccaaa 162  Q
    ||||||||||||| | ||||||||||||||||||||||    
T  4855633 cttatgctataagtatttaattaagttgtttatccaaa 4855596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 162
Target Start/End: Original strand, 7026411 - 7026440
Alignment:
Q  133 ataagcacttaattaagttgtttatccaaa 162  Q
    ||||||||||||||||||||||||||||||    
T  7026411 ataagcacttaattaagttgtttatccaaa 7026440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 103
Target Start/End: Complemental strand, 7853643 - 7853602
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaatagattata 103  Q
    ||||| ||||||||||||| |||||||||||||||| |||||    
T  7853643 aatttaactttattttatcttttgttatagaaatagtttata 7853602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 110
Target Start/End: Original strand, 11095557 - 11095602
Alignment:
Q  65 ttgactttattttatcctttgttatagaaatagattatacaaaatc 110  Q
    ||||||||||| |||| |||||||||||||||| ||||||| ||||    
T  11095557 ttgactttattgtatcatttgttatagaaatagtttatacataatc 11095602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 103
Target Start/End: Complemental strand, 11615493 - 11615452
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaatagattata 103  Q
    ||||||||||||||||||| ||||||||| |||||| |||||    
T  11615493 aatttgactttattttatcttttgttataaaaatagcttata 11615452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 102
Target Start/End: Complemental strand, 11667145 - 11667108
Alignment:
Q  65 ttgactttattttatcctttgttatagaaatagattat 102  Q
    ||||||||||||||||||||||||| ||||||| ||||    
T  11667145 ttgactttattttatcctttgttattgaaatagtttat 11667108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 105
Target Start/End: Original strand, 12407752 - 12407789
Alignment:
Q  68 actttattttatcctttgttatagaaatagattataca 105  Q
    ||||||||||||| |||||||||||||||| |||||||    
T  12407752 actttattttatcttttgttatagaaatagcttataca 12407789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 97
Target Start/End: Complemental strand, 14295489 - 14295456
Alignment:
Q  64 tttgactttattttatcctttgttatagaaatag 97  Q
    ||||||||||||||||| ||||||||||||||||    
T  14295489 tttgactttattttatcttttgttatagaaatag 14295456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 162
Target Start/End: Original strand, 14716620 - 14716657
Alignment:
Q  125 cttatgctataagcacttaattaagttgtttatccaaa 162  Q
    ||||||||||||||||||||||||| ||| ||||||||    
T  14716620 cttatgctataagcacttaattaagctgtatatccaaa 14716657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 23137402 - 23137365
Alignment:
Q  125 cttatgctataagcacttaattaagttgtttatccaaa 162  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  23137402 cttatactataagcactcaattaagttgtttatccaaa 23137365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 97
Target Start/End: Original strand, 28586853 - 28586886
Alignment:
Q  64 tttgactttattttatcctttgttatagaaatag 97  Q
    ||||||||||||||||| ||||||||||||||||    
T  28586853 tttgactttattttatcttttgttatagaaatag 28586886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 162
Target Start/End: Complemental strand, 28981934 - 28981889
Alignment:
Q  117 gataaacgcttatgctataagcacttaattaagttgtttatccaaa 162  Q
    |||||||| |||||||||||||| |||||||||||  |||||||||    
T  28981934 gataaacgtttatgctataagcaattaattaagttacttatccaaa 28981889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 162
Target Start/End: Complemental strand, 33961678 - 33961586
Alignment:
Q  72 tattttatcctttgttatagaaatagattatacaaaatc--ttttacgataaacgcttatgctataagcacttaattaagttgtttatccaaa 162  Q
    ||||||||||||||||||| || ||  |||||||||| |  || || |||||  |||||| |||||| ||||||||||||| |||| ||||||    
T  33961678 tattttatcctttgttataaaagtaccttatacaaaaacacttatatgataagtgcttatactataaacacttaattaagtcgtttctccaaa 33961586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 35135749 - 35135790
Alignment:
Q  64 tttgactttattttatcctttgttatagaaatagattataca 105  Q
    ||||||||||||||||| |||||||||||||||  |||||||    
T  35135749 tttgactttattttatcttttgttatagaaatatcttataca 35135790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 39750059 - 39750022
Alignment:
Q  125 cttatgctataagcacttaattaagttgtttatccaaa 162  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  39750059 cttatgttatgagcacttaattaagttgtttatccaaa 39750022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 162
Target Start/End: Complemental strand, 41052818 - 41052773
Alignment:
Q  117 gataaacgcttatgctataagcacttaattaagttgtttatccaaa 162  Q
    ||||| || |||||||| |||||||||||||| |||||||||||||    
T  41052818 gataagcgtttatgctacaagcacttaattaaattgtttatccaaa 41052773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 14331273 - 14331237
Alignment:
Q  126 ttatgctataagcacttaattaagttgtttatccaaa 162  Q
    |||||||||||||||||| | ||||||||||||||||    
T  14331273 ttatgctataagcacttactcaagttgtttatccaaa 14331237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 105
Target Start/End: Complemental strand, 28578874 - 28578834
Alignment:
Q  65 ttgactttattttatcctttgttatagaaatagattataca 105  Q
    |||||||||||||||| | |||||||||||||| |||||||    
T  28578874 ttgactttattttatcttatgttatagaaatagcttataca 28578834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 96
Target Start/End: Original strand, 29117017 - 29117049
Alignment:
Q  64 tttgactttattttatcctttgttatagaaata 96  Q
    ||||||||||||||||| |||||||||||||||    
T  29117017 tttgactttattttatcttttgttatagaaata 29117049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 97
Target Start/End: Original strand, 29590828 - 29590860
Alignment:
Q  65 ttgactttattttatcctttgttatagaaatag 97  Q
    |||||||||||||||| ||||||||||||||||    
T  29590828 ttgactttattttatcttttgttatagaaatag 29590860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 94
Target Start/End: Original strand, 32969202 - 32969234
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaa 94  Q
    ||||||||||||||||||| |||||||||||||    
T  32969202 aatttgactttattttatcttttgttatagaaa 32969234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 167
Target Start/End: Original strand, 39823270 - 39823314
Alignment:
Q  123 cgcttatgctataagcacttaattaagttgtttatccaaaaaggg 167  Q
    |||||||||| ||||| ||| ||||||||||||||||||| ||||    
T  39823270 cgcttatgctgtaagcgcttgattaagttgtttatccaaacaggg 39823314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 64 - 160
Target Start/End: Original strand, 1161 - 1259
Alignment:
Q  64 tttgactttattttatcctttgttatagaaatagattatacaaaa--tcttttacgataaacgcttatgctataagcacttaattaagttgtttatcca 160  Q
    ||||||||||||||||| |||||||||||||||| ||||||| ||   ||| || |||| ||| |||||||||||| ||||||||||||||||||||||    
T  1161 tttgactttattttatcttttgttatagaaatagcttatacataagcacttatatgatagacgtttatgctataagtacttaattaagttgtttatcca 1259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 64 - 160
Target Start/End: Complemental strand, 2814 - 2716
Alignment:
Q  64 tttgactttattttatcctttgttatagaaatagattatacaaaa--tcttttacgataaacgcttatgctataagcacttaattaagttgtttatcca 160  Q
    ||||||||||||||||| |||||||||||||||| ||||||| ||   ||| || |||| ||| |||||||||||| ||||||||||||||||||||||    
T  2814 tttgactttattttatcttttgttatagaaatagcttatacataagcacttatatgatagacgtttatgctataagtacttaattaagttgtttatcca 2716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 2e-20; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 61 - 167
Target Start/End: Original strand, 7100703 - 7100809
Alignment:
Q  61 aaatttgactttattttatcctttgttatagaaatagattatacaaaatcttttacgataaacgcttatgctataagcacttaattaagttgtttatcca 160  Q
    |||||||||||| ||||||| ||||||||| |||||| ||| ||||   ||| || ||||||||||||| ||||||||| |||||||||| |||||||||    
T  7100703 aaatttgacttttttttatcttttgttataaaaatagcttacacaagtacttatatgataaacgcttatactataagcatttaattaagtagtttatcca 7100802  T
Q  161 aaaaggg 167  Q
    || ||||    
T  7100803 aacaggg 7100809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 65 - 162
Target Start/End: Complemental strand, 30134031 - 30133934
Alignment:
Q  65 ttgactttattttatcctttgttatagaaatagattatacaaaatcttttacgataaacgcttatgctataagcacttaattaagttgtttatccaaa 162  Q
    |||||||||||||||| |||||| || |||||| ||||||| || |  ||| ||||| ||||||||||||||||| |||||| |||||||||||||||    
T  30134031 ttgactttattttatcttttgttgtaaaaatagcttatacataaacacttatgataagcgcttatgctataagcatttaattgagttgtttatccaaa 30133934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 64 - 168
Target Start/End: Complemental strand, 31341177 - 31341071
Alignment:
Q  64 tttgactttattttatcctttgttatagaaatagattatacaaaatcttttac--gataaacgcttatgctataagcacttaattaagttgtttatccaa 161  Q
    ||||||||||||||||| ||||||||| |||||| ||||||| || | ||||   ||||| ||||||||| |||||| ||| ||||||||||||||||||    
T  31341177 tttgactttattttatcttttgttatacaaatagcttatacataagcatttagatgataagcgcttatgcaataagcgcttgattaagttgtttatccaa 31341078  T
Q  162 aaagggc 168  Q
    | |||||    
T  31341077 acagggc 31341071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 64 - 162
Target Start/End: Original strand, 27481381 - 27481481
Alignment:
Q  64 tttgactttattttatcctttgttatagaaatagattatacaaaatc--ttttacgataaacgcttatgctataagcacttaattaagttgtttatccaa 161  Q
    ||||||||  |||||||||||||||||||||||| ||||||| || |  || ||  ||||||  ||||||||||||||| ||||||||||||||||||||    
T  27481381 tttgacttcgttttatcctttgttatagaaatagcttatacataaacacttatataataaacatttatgctataagcacctaattaagttgtttatccaa 27481480  T
Q  162 a 162  Q
    |    
T  27481481 a 27481481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 64 - 168
Target Start/End: Original strand, 28340483 - 28340589
Alignment:
Q  64 tttgactttattttatcctttgttatagaaatagattataca--aaatcttttacgataaacgcttatgctataagcacttaattaagttgtttatccaa 161  Q
    ||||||||||||||||  ||||||  |||||||| |||||||  ||  ||| |||||||||| || |||||||||||||||||||||| ||| |||||||    
T  28340483 tttgactttattttattgtttgttgaagaaatagcttatacattaatacttgtacgataaacactaatgctataagcacttaattaagctgtatatccaa 28340582  T
Q  162 aaagggc 168  Q
    | |||||    
T  28340583 acagggc 28340589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 64 - 162
Target Start/End: Original strand, 753291 - 753391
Alignment:
Q  64 tttgactttattttatcctttgttatagaaatagattatacaaaatc--ttttacgataaacgcttatgctataagcacttaattaagttgtttatccaa 161  Q
    ||||||||||||| ||  ||||||||||||||||  |||||| || |  || || |||||| | ||||||||||| ||||||||||||||||||||||||    
T  753291 tttgactttatttcatattttgttatagaaatagtgtatacacaagcgcttatatgataaatgtttatgctataaacacttaattaagttgtttatccaa 753390  T
Q  162 a 162  Q
    |    
T  753391 a 753391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 44 - 157
Target Start/End: Original strand, 43318591 - 43318704
Alignment:
Q  44 tgaaaacagcttatatga----aatttgactttattttatcctttgttatagaaatagattatacaaaatcttttacgataaacgcttatgctataagca 139  Q
    ||||| ||||||||||||    ||||||||||||||||||| |||||||||||||||| |||| |    | || || |||||| ||||| |||||| |||    
T  43318591 tgaaatcagcttatatgataacaatttgactttattttatcatttgttatagaaatagcttattc----tattatatgataaatgcttacgctataggca 43318686  T
Q  140 cttaattaagttgtttat 157  Q
     |||||||||||||||||    
T  43318687 tttaattaagttgtttat 43318704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 154
Target Start/End: Complemental strand, 47004070 - 47003978
Alignment:
Q  64 tttgactttattttatcctttgttatagaaatagatta--tacaaaatcttttacgataaacgcttatgctataagcacttaattaagttgtt 154  Q
    |||||||||||||||||  ||||||||||||||| |||  || |||  ||| || |||||||  || ||||||||||||||||||||||||||    
T  47004070 tttgactttattttatctattgttatagaaatagcttacatataaacacttatatgataaacatttttgctataagcacttaattaagttgtt 47003978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 158
Target Start/End: Original strand, 7453482 - 7453581
Alignment:
Q  61 aaatttgactttattttatcctttgttatagaaatagattataca--aaatcttttacgataaacgcttatgctataagcacttaattaagttgtttatc 158  Q
    |||||||||||||||||||| |||| |||||||| |  |||||||  ||  |||||| |||||||||| ||  ||||||  |||||||||||||||||||    
T  7453482 aaatttgactttattttatcttttgctatagaaaaatcttatacatgaacccttttatgataaacgctaattatataagttcttaattaagttgtttatc 7453581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 49060525 - 49060423
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaatagattataca-aaat-cttttacgataaacgcttatgctataagcacttaattaagttgtttatcc 159  Q
    ||||||||||||||||||  |||||||||||||||| ||||||| |||| ||| || ||||| |  |||| |||||||  |||||||||| |||||| ||    
T  49060525 aatttgactttattttattttttgttatagaaatagcttatacataaatacttatatgataagccattatactataagtgcttaattaagctgtttaccc 49060426  T
Q  160 aaa 162  Q
    |||    
T  49060425 aaa 49060423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 162
Target Start/End: Original strand, 5630057 - 5630102
Alignment:
Q  117 gataaacgcttatgctataagcacttaattaagttgtttatccaaa 162  Q
    ||||||| ||||| ||||||| ||||||||||||||||||||||||    
T  5630057 gataaacacttattctataaggacttaattaagttgtttatccaaa 5630102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 103
Target Start/End: Complemental strand, 42656499 - 42656459
Alignment:
Q  63 atttgactttattttatcctttgttatagaaatagattata 103  Q
    |||||||||||||||||| |||||||||||||||| |||||    
T  42656499 atttgactttattttatcttttgttatagaaatagcttata 42656459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 106
Target Start/End: Original strand, 43152987 - 43153031
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaatagattatacaa 106  Q
    ||||| ||||||||||||| |||||||||||||||| ||||||||    
T  43152987 aatttaactttattttatcttttgttatagaaatagcttatacaa 43153031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 166
Target Start/End: Original strand, 46281354 - 46281394
Alignment:
Q  126 ttatgctataagcacttaattaagttgtttatccaaaaagg 166  Q
    |||||||||||||| |||||| |||||||||||||||||||    
T  46281354 ttatgctataagcagttaattgagttgtttatccaaaaagg 46281394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 105
Target Start/End: Complemental strand, 1417249 - 1417206
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaatagattataca 105  Q
    ||||||||||||||||||| ||||||||| |||||| |||||||    
T  1417249 aatttgactttattttatcttttgttatataaatagtttataca 1417206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 168
Target Start/End: Original strand, 5620244 - 5620287
Alignment:
Q  125 cttatgctataagcacttaattaagttgtttatccaaaaagggc 168  Q
    |||| |||||||| |||||||||||||||||||||||| |||||    
T  5620244 cttaggctataagaacttaattaagttgtttatccaaacagggc 5620287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 105
Target Start/End: Complemental strand, 28178950 - 28178911
Alignment:
Q  66 tgactttattttatcctttgttatagaaatagattataca 105  Q
    ||||||||||||||| |||||||||||||||| |||||||    
T  28178950 tgactttattttatcttttgttatagaaatagcttataca 28178911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 105
Target Start/End: Complemental strand, 30496689 - 30496646
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaatagattataca 105  Q
    ||||||||||||||||||  |||||||||||||||| |||||||    
T  30496689 aatttgactttattttatattttgttatagaaatagtttataca 30496646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 105
Target Start/End: Complemental strand, 35536092 - 35536049
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaatagattataca 105  Q
    ||||||||||||||||||| | |||||||||||||| |||||||    
T  35536092 aatttgactttattttatcttatgttatagaaatagcttataca 35536049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 167
Target Start/End: Original strand, 657842 - 657876
Alignment:
Q  133 ataagcacttaattaagttgtttatccaaaaaggg 167  Q
    |||||||||||||||||||||||||||||| ||||    
T  657842 ataagcacttaattaagttgtttatccaaacaggg 657876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 104
Target Start/End: Original strand, 2767271 - 2767305
Alignment:
Q  70 tttattttatcctttgttatagaaatagattatac 104  Q
    ||||||||||| |||||||||||||||||||||||    
T  2767271 tttattttatcttttgttatagaaatagattatac 2767305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 160
Target Start/End: Complemental strand, 28844413 - 28844371
Alignment:
Q  118 ataaacgcttatgctataagcacttaattaagttgtttatcca 160  Q
    |||| |||||||||||||| |||||||||||||||| ||||||    
T  28844413 ataagcgcttatgctataaacacttaattaagttgtatatcca 28844371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 36532336 - 36532239
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaatagattatacaaaatcttttacgataaacgcttatgctataagcacttaattaagttgtttatcca 160  Q
    ||||||||||| ||||||| ||||||||||  |||  ||||||| ||  || || ||||| || ||||| ||||| |||||||||| ||||||||||||    
T  36532336 aatttgactttgttttatcttttgttatagggataacttatacataaa-ttatatgataagcgtttatggtataatcacttaattatgttgtttatcca 36532239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 96
Target Start/End: Original strand, 39591552 - 39591586
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaata 96  Q
    ||||||||||||||||||| |||||||||||||||    
T  39591552 aatttgactttattttatcttttgttatagaaata 39591586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 96
Target Start/End: Original strand, 47046193 - 47046227
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaata 96  Q
    |||||||||||||||||||||||||| ||||||||    
T  47046193 aatttgactttattttatcctttgttgtagaaata 47046227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 97
Target Start/End: Complemental strand, 2999174 - 2999141
Alignment:
Q  64 tttgactttattttatcctttgttatagaaatag 97  Q
    ||||||||||||||||| ||||||||||||||||    
T  2999174 tttgactttattttatcttttgttatagaaatag 2999141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 5006596 - 5006637
Alignment:
Q  64 tttgactttattttatcctttgttatagaaatagattataca 105  Q
    ||||||||||||||||| |||||||||| ||||| |||||||    
T  5006596 tttgactttattttatcttttgttataggaatagcttataca 5006637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 28702677 - 28702640
Alignment:
Q  125 cttatgctataagcacttaattaagttgtttatccaaa 162  Q
    |||||||||||||  |||||||||||||||||||||||    
T  28702677 cttatgctataagtgcttaattaagttgtttatccaaa 28702640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 35808991 - 35809032
Alignment:
Q  64 tttgactttattttatcctttgttatagaaatagattataca 105  Q
    ||||||| ||||||||| |||||||||||||||| |||||||    
T  35808991 tttgactatattttatcttttgttatagaaatagcttataca 35809032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 162
Target Start/End: Original strand, 39539904 - 39539933
Alignment:
Q  133 ataagcacttaattaagttgtttatccaaa 162  Q
    ||||||||||||||||||||||||||||||    
T  39539904 ataagcacttaattaagttgtttatccaaa 39539933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 1083872 - 1083908
Alignment:
Q  126 ttatgctataagcacttaattaagttgtttatccaaa 162  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  1083872 ttatgctataagcgcttaattaagttgtttattcaaa 1083908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 105
Target Start/End: Complemental strand, 1418413 - 1418373
Alignment:
Q  65 ttgactttattttatcctttgttatagaaatagattataca 105  Q
    ||||||||||| |||| ||||||||||||||| ||||||||    
T  1418413 ttgactttattatatcttttgttatagaaataaattataca 1418373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 102
Target Start/End: Complemental strand, 1792478 - 1792438
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaatagattat 102  Q
    ||||||||||||||| ||| |||||||||||||||| ||||    
T  1792478 aatttgactttatttcatcatttgttatagaaatagtttat 1792438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 2013173 - 2013106
Alignment:
Q  73 attttatcctttgttatagaaatagattatacaaaatc--ttttacgataaacgcttatgctataagc 138  Q
    |||||||| ||||||||||||||| |||||||| || |  || ||||||||| |||||| ||||||||    
T  2013173 attttatcttttgttatagaaataaattatacataagcatttatacgataaatgcttattctataagc 2013106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 162
Target Start/End: Complemental strand, 2221900 - 2221848
Alignment:
Q  110 cttttacgataaacgcttatgctataagcacttaattaagttgtttatccaaa 162  Q
    |||||| | ||| |||||||||||||||   ||||||||||||||||||||||    
T  2221900 cttttatggtaagcgcttatgctataagtgtttaattaagttgtttatccaaa 2221848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 2380262 - 2380226
Alignment:
Q  126 ttatgctataagcacttaattaagttgtttatccaaa 162  Q
    ||||| ||||||| |||||||||||||||||||||||    
T  2380262 ttatgttataagcgcttaattaagttgtttatccaaa 2380226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 148
Target Start/End: Complemental strand, 8445270 - 8445183
Alignment:
Q  63 atttgactttattttatcctttgttatagaaatagattatacaaaatc--ttttacgataaacgcttatgctataagcacttaattaa 148  Q
    ||||| |||||||||||| ||||||||| |||||| ||||| | || |  || || ||||||| || |||||||| ||||||||||||    
T  8445270 atttgtctttattttatcttttgttataaaaatagcttataaacaagcacttatatgataaacactaatgctatacgcacttaattaa 8445183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 22388055 - 22388091
Alignment:
Q  126 ttatgctataagcacttaattaagttgtttatccaaa 162  Q
    ||||| ||||||| |||||||||||||||||||||||    
T  22388055 ttatgttataagcgcttaattaagttgtttatccaaa 22388091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 105
Target Start/End: Complemental strand, 24975882 - 24975846
Alignment:
Q  69 ctttattttatcctttgttatagaaatagattataca 105  Q
    |||||||||||| |||||||||||| |||||||||||    
T  24975882 ctttattttatcttttgttatagaagtagattataca 24975846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 162
Target Start/End: Complemental strand, 29290301 - 29290253
Alignment:
Q  114 tacgataaacgcttatgctataagcacttaattaagttgtttatccaaa 162  Q
    |||||||||| |||||||||||||  || |||||||||||| |||||||    
T  29290301 tacgataaacccttatgctataagtgctgaattaagttgttcatccaaa 29290253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 2e-18; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 22684583 - 22684702
Alignment:
Q  48 aacagcttatatgaaa----tttgactttattttatcctttgttatagaaatagattatacaaaatc--ttttacgataaacgcttatgctataagcact 141  Q
    ||||||||||||||||    ||||||||||||||| | |||||||||||||||| ||||||| || |  || || ||||| ||| |||| |||||||| |    
T  22684583 aacagcttatatgaaaacaatttgactttattttaccgtttgttatagaaatagcttatacagaagcatttatatgataagcgcatatggtataagcaat 22684682  T
Q  142 taattaagttgtttatccaa 161  Q
    ||||||||||||||||||||    
T  22684683 taattaagttgtttatccaa 22684702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 62 - 169
Target Start/End: Complemental strand, 486067 - 485957
Alignment:
Q  62 aatttgacttt-attttatcctttgttatagaaatagattatacaaaatc--ttttacgataaacgcttatgctataagcacttaattaagttgtttatc 158  Q
    ||||||||||| |||||||| |||||| |||||||||  |||||| || |  ||||| ||||| |||||||||||||||| ||||||||||| ||| |||    
T  486067 aatttgacttttattttatcttttgttttagaaatagcatatacataagcacttttatgataagcgcttatgctataagcgcttaattaagtagttcatc 485968  T
Q  159 caaaaagggct 169  Q
    |||| ||||||    
T  485967 caaacagggct 485957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 162
Target Start/End: Complemental strand, 24929473 - 24929376
Alignment:
Q  67 gactttattttatcctttgttatagaaatagattatacaaaatc--ttttacgataaacgcttatgctataagcacttaattaagttgtttatccaaa 162  Q
    |||||||||||||| |||||||||||||||| | |||||||| |  || || |||||  | ||||| ||||| |||| ||||||||||||||||||||    
T  24929473 gactttattttatcttttgttatagaaatagttcatacaaaaacaattatatgataagagattatgttataaacactcaattaagttgtttatccaaa 24929376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 157
Target Start/End: Complemental strand, 30024685 - 30024588
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaatagattatacaaaat--cttttacgataaacgcttatgctataagcacttaattaagttgtttat 157  Q
    ||||| ||||||||||||| |||||||||||||||  |||| || ||   ||| || ||||||||||| | |||||| ||||||||||||||||||||    
T  30024685 aattttactttattttatcttttgttatagaaataacttatgcataagtacttatatgataaacgcttctactataaacacttaattaagttgtttat 30024588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 8422926 - 8423024
Alignment:
Q  66 tgactttattttatcctttgttatagaaatagattatacaaaatct--tttacgataaacgcttatgctataagcacttaattaagttgtttatccaaa 162  Q
    ||||||||||||||| ||| ||||| |||||| ||||||| || |   | || |||| | | ||||||||||| |||||||||||||||||||||||||    
T  8422926 tgactttattttatctttttttataaaaatagcttatacataagcacatatatgatacatgattatgctataaacacttaattaagttgtttatccaaa 8423024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 164
Target Start/End: Original strand, 41162195 - 41162242
Alignment:
Q  117 gataaacgcttatgctataagcacttaattaagttgtttatccaaaaa 164  Q
    |||||||||||||| ||||||  |||||||||||||||||||||||||    
T  41162195 gataaacgcttatgttataagtgcttaattaagttgtttatccaaaaa 41162242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 51044546 - 51044587
Alignment:
Q  64 tttgactttattttatcctttgttatagaaatagattataca 105  Q
    ||||||||||||||||| |||||||||||||||| |||||||    
T  51044546 tttgactttattttatcttttgttatagaaatagcttataca 51044587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 2726400 - 2726444
Alignment:
Q  114 tacgataaacgcttatgctataagcacttaattaagttgtttatc 158  Q
    |||||||| |||||||||||||||  |||||||||||||||||||    
T  2726400 tacgataagcgcttatgctataagttcttaattaagttgtttatc 2726444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 161
Target Start/End: Original strand, 18512561 - 18512605
Alignment:
Q  117 gataaacgcttatgctataagcacttaattaagttgtttatccaa 161  Q
    |||||| | ||||||||||||||||||||||||||| ||||||||    
T  18512561 gataaatgtttatgctataagcacttaattaagttgcttatccaa 18512605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 167
Target Start/End: Original strand, 21043366 - 21043406
Alignment:
Q  127 tatgctataagcacttaattaagttgtttatccaaaaaggg 167  Q
    |||||||||||||||| ||||||||||||| ||||||||||    
T  21043366 tatgctataagcacttcattaagttgtttacccaaaaaggg 21043406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 97
Target Start/End: Complemental strand, 4071867 - 4071832
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaatag 97  Q
    ||||||||||||||||||| ||||||||||||||||    
T  4071867 aatttgactttattttatcttttgttatagaaatag 4071832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 105
Target Start/End: Complemental strand, 6364134 - 6364091
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaatagattataca 105  Q
    ||||| ||||||||||||| |||||||||||||||| |||||||    
T  6364134 aatttcactttattttatcttttgttatagaaatagcttataca 6364091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 162
Target Start/End: Original strand, 23525717 - 23525752
Alignment:
Q  127 tatgctataagcacttaattaagttgtttatccaaa 162  Q
    ||||||||||||||||||||||| ||||||||||||    
T  23525717 tatgctataagcacttaattaagatgtttatccaaa 23525752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 105
Target Start/End: Complemental strand, 24160975 - 24160932
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaatagattataca 105  Q
    ||||| |||| ||||||||||||||||||||||||| |||||||    
T  24160975 aatttaacttgattttatcctttgttatagaaatagcttataca 24160932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 162
Target Start/End: Original strand, 41241649 - 41241731
Alignment:
Q  82 tttgttatagaaatagattatacaaaat--cttttacgataaacgcttatgctataagcacttaattaagttgtttatccaaa 162  Q
    |||||||||||||||| ||| ||| ||   ||| || |||| ||||||||||||||||||||||||||  |||||| ||||||    
T  41241649 tttgttatagaaatagcttaaacacaagtacttatatgatagacgcttatgctataagcacttaattatattgtttgtccaaa 41241731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 168
Target Start/End: Complemental strand, 42866048 - 42865997
Alignment:
Q  117 gataaacgcttatgctataagcacttaattaagttgtttatccaaaaagggc 168  Q
    ||||||| ||||||||||||| | | |||||||||||||||||||| |||||    
T  42866048 gataaacacttatgctataagtattaaattaagttgtttatccaaacagggc 42865997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 162
Target Start/End: Complemental strand, 4243269 - 4243223
Alignment:
Q  117 gataaacgcttatgcta-taagcacttaattaagttgtttatccaaa 162  Q
    ||||| ||||||||||| |||||||||||||||| ||||||||||||    
T  4243269 gataagcgcttatgctaataagcacttaattaagctgtttatccaaa 4243223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 168
Target Start/End: Complemental strand, 10812436 - 10812378
Alignment:
Q  110 cttttacgataaacgcttatgctataagcacttaattaagttgtttatccaaaaagggc 168  Q
    |||||| ||||||  ||||||||||||| |||| | ||||||||||||||||| |||||    
T  10812436 cttttatgataaatacttatgctataagaactttactaagttgtttatccaaacagggc 10812378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 167
Target Start/End: Complemental strand, 33641036 - 33640986
Alignment:
Q  117 gataaacgcttatgctataagcacttaattaagttgtttatccaaaaaggg 167  Q
    ||||| || |||| ||||||||||||||||||| |||||||||||| ||||    
T  33641036 gataagcgattattctataagcacttaattaagctgtttatccaaacaggg 33640986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 104
Target Start/End: Complemental strand, 34368862 - 34368820
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaatagattatac 104  Q
    ||||||||||| ||||||| |||||||||||||||| ||||||    
T  34368862 aatttgactttgttttatcttttgttatagaaatagcttatac 34368820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 160
Target Start/End: Original strand, 40709531 - 40709565
Alignment:
Q  126 ttatgctataagcacttaattaagttgtttatcca 160  Q
    ||||| |||||||||||||||||||||||||||||    
T  40709531 ttatgatataagcacttaattaagttgtttatcca 40709565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 97
Target Start/End: Original strand, 41701506 - 41701561
Alignment:
Q  46 aaaacagcttatatgaaa----tttgactttattttatcctttgttatagaaatag 97  Q
    ||||||||||||||||||    ||||||||||||||||| ||||||||| ||||||    
T  41701506 aaaacagcttatatgaaaacgatttgactttattttatcttttgttatataaatag 41701561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 155
Target Start/End: Original strand, 55437349 - 55437464
Alignment:
Q  44 tgaaaacagcttatatgaaa----tttgactttattttatcctttgttatagaaatagattatacaaaatc--ttttacgataaacgcttatgctataag 137  Q
    |||||| |||||||||||||    ||||||||||||||||   ||||||||||||||| ||||| | ||||  || || ||||| |  |||| |||||||    
T  55437349 tgaaaatagcttatatgaaaataatttgactttattttata--ttgttatagaaatagcttatagataatcgcttatatgataaccaattatactataag 55437446  T
Q  138 cacttaattaagttgttt 155  Q
    || |||||||||||||||    
T  55437447 catttaattaagttgttt 55437464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 157
Target Start/End: Complemental strand, 55599088 - 55599054
Alignment:
Q  123 cgcttatgctataagcacttaattaagttgtttat 157  Q
    ||||||||||||| |||||||||||||||||||||    
T  55599088 cgcttatgctatatgcacttaattaagttgtttat 55599054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 162
Target Start/End: Complemental strand, 6427946 - 6427917
Alignment:
Q  133 ataagcacttaattaagttgtttatccaaa 162  Q
    ||||||||||||||||||||||||||||||    
T  6427946 ataagcacttaattaagttgtttatccaaa 6427917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 97
Target Start/End: Original strand, 20936089 - 20936122
Alignment:
Q  64 tttgactttattttatcctttgttatagaaatag 97  Q
    ||||||||||||||||| ||||||||||||||||    
T  20936089 tttgactttattttatcttttgttatagaaatag 20936122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 162
Target Start/End: Complemental strand, 24444021 - 24443921
Alignment:
Q  64 tttgactttattttatcctttgttatagaaatagattatacaaaat--cttttacgataaacgcttatgctataagcacttaattaagttgtttatccaa 161  Q
    ||||| ||||||||||  |||||| ||||||| | ||||||| ||   ||| || |||||  ||||||||||||||| |||||| ||||||| |||||||    
T  24444021 tttgaatttattttatattttgttgtagaaatcgcttatacataagaacttatatgataagtgcttatgctataagcgcttaataaagttgtgtatccaa 24443922  T
Q  162 a 162  Q
    |    
T  24443921 a 24443921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 32724102 - 32724065
Alignment:
Q  64 tttgactttattttatcctttgttatagaaatagatta 101  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  32724102 tttgactttattttatcttttgtaatagaaatagatta 32724065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 105
Target Start/End: Complemental strand, 36734876 - 36734835
Alignment:
Q  64 tttgactttattttatcctttgttatagaaatagattataca 105  Q
    ||||||||||||||| | ||||||||||||| ||||||||||    
T  36734876 tttgactttattttaccttttgttatagaaagagattataca 36734835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 165
Target Start/End: Complemental strand, 46053617 - 46053580
Alignment:
Q  128 atgctataagcacttaattaagttgtttatccaaaaag 165  Q
    ||||||||||| |||||||||| |||||||||||||||    
T  46053617 atgctataagcgcttaattaagctgtttatccaaaaag 46053580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 105
Target Start/End: Complemental strand, 47970301 - 47970260
Alignment:
Q  64 tttgactttattttatcctttgttatagaaatagattataca 105  Q
    |||||||| |||||||| |||||||||||||||| |||||||    
T  47970301 tttgacttcattttatcttttgttatagaaatagcttataca 47970260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 54325124 - 54325165
Alignment:
Q  64 tttgactttattttatcctttgttatagaaatagattataca 105  Q
    ||||||||||||||||| ||||| |||||||||| |||||||    
T  54325124 tttgactttattttatcttttgtaatagaaatagtttataca 54325165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 3805184 - 3805220
Alignment:
Q  126 ttatgctataagcacttaattaagttgtttatccaaa 162  Q
    ||||||||||||| || ||||||||||||||||||||    
T  3805184 ttatgctataagctctcaattaagttgtttatccaaa 3805220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 93
Target Start/End: Complemental strand, 11802520 - 11802488
Alignment:
Q  61 aaatttgactttattttatcctttgttatagaa 93  Q
    |||||||||||||||||||| ||||||||||||    
T  11802520 aaatttgactttattttatcttttgttatagaa 11802488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 157
Target Start/End: Complemental strand, 14172013 - 14171973
Alignment:
Q  117 gataaacgcttatgctataagcacttaattaagttgtttat 157  Q
    |||||| ||||||| |||||||||||||||||| |||||||    
T  14172013 gataaatgcttatgttataagcacttaattaagctgtttat 14171973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 105
Target Start/End: Original strand, 21593099 - 21593139
Alignment:
Q  65 ttgactttattttatcctttgttatagaaatagattataca 105  Q
    |||||||||||||||| || ||||||||||||| |||||||    
T  21593099 ttgactttattttatctttagttatagaaatagtttataca 21593139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 105
Target Start/End: Complemental strand, 35958641 - 35958597
Alignment:
Q  61 aaatttgactttattttatcctttgttatagaaatagattataca 105  Q
    |||||||||||||||||| | | |||||||||||||| |||||||    
T  35958641 aaatttgactttattttaacttatgttatagaaatagcttataca 35958597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 102
Target Start/End: Original strand, 42321964 - 42322004
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaatagattat 102  Q
    ||||||||||||||||||| ||||||||| |||||| ||||    
T  42321964 aatttgactttattttatcatttgttataaaaatagcttat 42322004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 105
Target Start/End: Original strand, 54277402 - 54277442
Alignment:
Q  65 ttgactttattttatcctttgttatagaaatagattataca 105  Q
    |||||||||||||||| |||||||||||| ||| |||||||    
T  54277402 ttgactttattttatcttttgttatagaagtagtttataca 54277442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 2e-18; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 62 - 168
Target Start/End: Complemental strand, 49517055 - 49516946
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaatagattatacaaaatc---ttttacgataaacgcttatgctataagcacttaattaagttgtttatc 158  Q
    ||||||||||||||||||| |||||||||||||||  ||||||| || |   || || |||||||||||||| | ||||||||||||||||||||| ||     
T  49517055 aatttgactttattttatcttttgttatagaaataacttatacacaaacaatttatatgataaacgcttatgttttaagcacttaattaagttgttcatt 49516956  T
Q  159 caaaaagggc 168  Q
    |||| |||||    
T  49516955 caaacagggc 49516946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 62 - 157
Target Start/End: Complemental strand, 3224408 - 3224311
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaatagattataca--aaatcttttacgataaacgcttatgctataagcacttaattaagttgtttat 157  Q
    |||||||||||| || ||||||||||||| |||||| |||||||  | | ||| || |||||| ||||||| ||||||||||| ||||||||||||||    
T  3224408 aatttgactttacttgatcctttgttatataaatagcttatacattagagcttatatgataaatgcttatgttataagcacttgattaagttgtttat 3224311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 162
Target Start/End: Complemental strand, 23895319 - 23895219
Alignment:
Q  64 tttgactttattttatcctttgttatagaaatagattatacaaaat--cttttacgataaacgcttatgctataagcacttaattaagttgtttatccaa 161  Q
    ||||| ||||||||||| |||||||||||||||| ||||||| |||  ||| || |||||  ||||||||| ||||  |||||||||||| || ||||||    
T  23895319 tttgaatttattttatcttttgttatagaaatagcttatacataataacttatatgataagggcttatgctttaagtgcttaattaagttattcatccaa 23895220  T
Q  162 a 162  Q
    |    
T  23895219 a 23895219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 162
Target Start/End: Original strand, 29666452 - 29666497
Alignment:
Q  117 gataaacgcttatgctataagcacttaattaagttgtttatccaaa 162  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||    
T  29666452 gataaacgcatatgctataagcacttaagtaagttgtttatccaaa 29666497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 105
Target Start/End: Original strand, 40357971 - 40358014
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaatagattataca 105  Q
    |||||||||||||||||||| ||||||||||||||| |||||||    
T  40357971 aatttgactttattttatccattgttatagaaatagcttataca 40358014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 162
Target Start/End: Complemental strand, 49175590 - 49175511
Alignment:
Q  84 tgttatagaaatagattatacaaaatcttt-tacgataaacgcttatgctataagcacttaattaagttgtttatccaaa 162  Q
    ||||||||||||||  |||||||||| ||| ||||||||  || |||||||||| | |||||||||||||||||| ||||    
T  49175590 tgttatagaaataggctatacaaaatatttctacgataagtgcgtatgctataatcgcttaattaagttgtttatacaaa 49175511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 162
Target Start/End: Complemental strand, 16322763 - 16322725
Alignment:
Q  124 gcttatgctataagcacttaattaagttgtttatccaaa 162  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  16322763 gcttgtgctataagcacttaattaagttgtttatccaaa 16322725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 164
Target Start/End: Original strand, 29794067 - 29794111
Alignment:
Q  120 aaacgcttatgctataagcacttaattaagttgtttatccaaaaa 164  Q
    |||| |||||||||||||| |||||||||| ||||||||||||||    
T  29794067 aaacacttatgctataagcgcttaattaagctgtttatccaaaaa 29794111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 162
Target Start/End: Original strand, 49365931 - 49365975
Alignment:
Q  118 ataaacgcttatgctataagcacttaattaagttgtttatccaaa 162  Q
    ||||||| ||||||||||||| ||||| |||||||||||||||||    
T  49365931 ataaacgtttatgctataagcgcttaactaagttgtttatccaaa 49365975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 105
Target Start/End: Complemental strand, 50319274 - 50319234
Alignment:
Q  65 ttgactttattttatcctttgttatagaaatagattataca 105  Q
    |||||||||||||||| |||||||||||||||| |||||||    
T  50319274 ttgactttattttatcttttgttatagaaatagcttataca 50319234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 164
Target Start/End: Complemental strand, 52542485 - 52542445
Alignment:
Q  124 gcttatgctataagcacttaattaagttgtttatccaaaaa 164  Q
    ||||||||||| ||| |||||||||||||||||||||||||    
T  52542485 gcttatgctatcagcgcttaattaagttgtttatccaaaaa 52542445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 105
Target Start/End: Original strand, 12519055 - 12519098
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaatagattataca 105  Q
    |||||||||||||||||| | ||||||||||| |||||||||||    
T  12519055 aatttgactttattttatacattgttatagaagtagattataca 12519098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 158
Target Start/End: Original strand, 15565919 - 15566014
Alignment:
Q  64 tttgactttattttatcctttgttatagaaatagattataca-aaatcttttacgataaacgcttatgctataagcacttaattaagttgtttatc 158  Q
    ||||||||||||||||| |||| | | ||||||   |||||| ||||||| || |||||||| |||||||| || |||||||||  ||||||||||    
T  15565919 tttgactttattttatcttttgctttggaaatattatatacataaatcttatatgataaacgtttatgctacaaacacttaattttgttgtttatc 15566014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 162
Target Start/End: Original strand, 24263283 - 24263326
Alignment:
Q  119 taaacgcttatgctataagcacttaattaagttgtttatccaaa 162  Q
    |||||| |||||||||||||||||||||||  ||||||||||||    
T  24263283 taaacgtttatgctataagcacttaattaaactgtttatccaaa 24263326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 105
Target Start/End: Original strand, 36151590 - 36151633
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaatagattataca 105  Q
    ||||||||||||||||||| |||||||| ||||||| |||||||    
T  36151590 aatttgactttattttatcttttgttattgaaatagcttataca 36151633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 96
Target Start/End: Original strand, 14737790 - 14737824
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaata 96  Q
    ||||||||||||||||||| |||||||||||||||    
T  14737790 aatttgactttattttatcttttgttatagaaata 14737824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 162
Target Start/End: Original strand, 29415858 - 29415896
Alignment:
Q  124 gcttatgctataagcacttaattaagttgtttatccaaa 162  Q
    ||||||||||||||| |||||||| ||||||||||||||    
T  29415858 gcttatgctataagcgcttaattatgttgtttatccaaa 29415896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 162
Target Start/End: Original strand, 30237895 - 30237933
Alignment:
Q  124 gcttatgctataagcacttaattaagttgtttatccaaa 162  Q
    ||||||||||||  |||||||||||||||||||||||||    
T  30237895 gcttatgctatagacacttaattaagttgtttatccaaa 30237933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 96
Target Start/End: Complemental strand, 36641860 - 36641826
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaata 96  Q
    ||||||||||||||||||| |||||||||||||||    
T  36641860 aatttgactttattttatcttttgttatagaaata 36641826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 167
Target Start/End: Original strand, 48133081 - 48133131
Alignment:
Q  117 gataaacgcttatgctataagcacttaattaagttgtttatccaaaaaggg 167  Q
    ||||| || ||||||||||||| |||||||||||||| |||||||| ||||    
T  48133081 gataagcgtttatgctataagcgcttaattaagttgtctatccaaacaggg 48133131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 158
Target Start/End: Complemental strand, 49173326 - 49173292
Alignment:
Q  124 gcttatgctataagcacttaattaagttgtttatc 158  Q
    ||||||||||||||||| |||||||||||||||||    
T  49173326 gcttatgctataagcacataattaagttgtttatc 49173292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 162
Target Start/End: Original strand, 12477428 - 12477473
Alignment:
Q  117 gataaacgcttatgctataagcacttaattaagttgtttatccaaa 162  Q
    ||||||| ||||| |||| || ||||||||||||||||||||||||    
T  12477428 gataaacacttatactatcagaacttaattaagttgtttatccaaa 12477473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 15514970 - 15514933
Alignment:
Q  125 cttatgctataagcacttaattaagttgtttatccaaa 162  Q
    |||||| ||||||| |||||||||||||||||||||||    
T  15514970 cttatggtataagcgcttaattaagttgtttatccaaa 15514933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 95
Target Start/End: Original strand, 36496570 - 36496603
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaat 95  Q
    ||||||||| ||||||||||||||||||||||||    
T  36496570 aatttgactatattttatcctttgttatagaaat 36496603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 162
Target Start/End: Complemental strand, 36653376 - 36653331
Alignment:
Q  117 gataaacgcttatgctataagcacttaattaagttgtttatccaaa 162  Q
    ||||| || |||||||||||  ||||||||||||||||||||||||    
T  36653376 gataagcgtttatgctataattacttaattaagttgtttatccaaa 36653331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 42351993 - 42352030
Alignment:
Q  64 tttgactttattttatcctttgttatagaaatagatta 101  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  42351993 tttgactttattttaacttttgttatagaaatagatta 42352030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 160
Target Start/End: Original strand, 44936738 - 44936775
Alignment:
Q  123 cgcttatgctataagcacttaattaagttgtttatcca 160  Q
    ||||||| ||||||||| ||||||||||||||||||||    
T  44936738 cgcttatactataagcatttaattaagttgtttatcca 44936775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 45999375 - 45999416
Alignment:
Q  64 tttgactttattttatcctttgttatagaaatagattataca 105  Q
    ||||||||||| ||||| |||||||||||||||| |||||||    
T  45999375 tttgactttatcttatcttttgttatagaaatagcttataca 45999416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 103
Target Start/End: Original strand, 46499939 - 46499980
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaatagattata 103  Q
    ||||||||||||||||||| ||| |||||||||||| |||||    
T  46499939 aatttgactttattttatcttttcttatagaaatagcttata 46499980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 96
Target Start/End: Complemental strand, 15360877 - 15360845
Alignment:
Q  64 tttgactttattttatcctttgttatagaaata 96  Q
    ||||||||||||||||| |||||||||||||||    
T  15360877 tttgactttattttatcttttgttatagaaata 15360845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 161
Target Start/End: Original strand, 22813759 - 22813795
Alignment:
Q  125 cttatgctataagcacttaattaagttgtttatccaa 161  Q
    ||||||||||||||||||| ||||||| |||||||||    
T  22813759 cttatgctataagcacttagttaagttctttatccaa 22813795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 106
Target Start/End: Complemental strand, 38578512 - 38578468
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaatagattatacaa 106  Q
    ||||| ||||||| ||||| |||||||||||||||| ||||||||    
T  38578512 aatttaactttatgttatcttttgttatagaaatagcttatacaa 38578468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 4e-16; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 68 - 161
Target Start/End: Complemental strand, 2206569 - 2206474
Alignment:
Q  68 actttattttatcctttgttatagaaatagattataca-aaat-cttttacgataaacgcttatgctataagcacttaattaagttgtttatccaa 161  Q
    ||||||||||||| ||||||||| |||||  ||||||| |||| ||| ||||||||  ||||||||||||||||||||||||||  ||||||||||    
T  2206569 actttattttatcttttgttataaaaataacttatacagaaatgcttatacgataagagcttatgctataagcacttaattaagaagtttatccaa 2206474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 71 - 171
Target Start/End: Original strand, 33068655 - 33068757
Alignment:
Q  71 ttattttatcctttgttatagaaatagattatacaaaatcttttac--gataaacgcttatgctataagcacttaattaagttgtttatccaaaaagggc 168  Q
    |||||||||| |||||||||||||||  ||||||| || | ||||   ||||| |||||||||||||| |||||||||||| |||| ||||||| |||||    
T  33068655 ttattttatcttttgttatagaaataacttatacataagcatttatttgataagcgcttatgctataaacacttaattaagctgttcatccaaacagggc 33068754  T
Q  169 tag 171  Q
    |||    
T  33068755 tag 33068757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 64 - 162
Target Start/End: Complemental strand, 3155159 - 3155059
Alignment:
Q  64 tttgactttattttatcctttgttatagaaatagattatacaaaatcttttac--gataaacgcttatgctataagcacttaattaagttgtttatccaa 161  Q
    ||||||||| ||||||| ||||| | ||| |||| ||||||| || | ||||   |||||||||||||||||||||| ||||| ||||||||||||||||    
T  3155159 tttgactttgttttatcttttgtaaaagagatagcttatacataaccatttatatgataaacgcttatgctataagcgcttaaataagttgtttatccaa 3155060  T
Q  162 a 162  Q
    |    
T  3155059 a 3155059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 125 - 162
Target Start/End: Original strand, 4247234 - 4247271
Alignment:
Q  125 cttatgctataagcacttaattaagttgtttatccaaa 162  Q
    ||||||||||||||||||||||||||||||||||||||    
T  4247234 cttatgctataagcacttaattaagttgtttatccaaa 4247271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 160
Target Start/End: Original strand, 4003750 - 4003785
Alignment:
Q  125 cttatgctataagcacttaattaagttgtttatcca 160  Q
    ||||||||||||||||||||||||||||||||||||    
T  4003750 cttatgctataagcacttaattaagttgtttatcca 4003785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 7714010 - 7713908
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaatagattatacaaaa--tcttttacgataaacgcttatgctataagcacttaattaagttgtttatcc 159  Q
    ||||||||||||||||||| ||||||||  || ||| ||||||| ||  |||| || ||||   | ||||||||||||||| |||||||||| |||||||    
T  7714010 aatttgactttattttatcttttgttatgaaagtagtttatacataagctcttatatgataggtggttatgctataagcacgtaattaagttctttatcc 7713911  T
Q  160 aaa 162  Q
    |||    
T  7713910 aaa 7713908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 160
Target Start/End: Original strand, 9833239 - 9833282
Alignment:
Q  117 gataaacgcttatgctataagcacttaattaagttgtttatcca 160  Q
    |||||||||||||| ||||| |||||||||||||||||||||||    
T  9833239 gataaacgcttatgttataaacacttaattaagttgtttatcca 9833282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 162
Target Start/End: Complemental strand, 31461651 - 31461561
Alignment:
Q  74 ttttatcctttgttatagaaatagattatacaaaatc--ttttacgataaacgcttatgctataagcacttaattaagttgtttatccaaa 162  Q
    ||||||| |||||||||||||||| ||||||| || |  || ||| ||||  ||||||  ||||||||||||||||||||||||| |||||    
T  31461651 ttttatcttttgttatagaaatagcttatacataagcacttatacaataagtgcttataatataagcacttaattaagttgtttaaccaaa 31461561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 65 - 163
Target Start/End: Original strand, 740953 - 741056
Alignment:
Q  65 ttgactttattttatcctttgttatagaaa---tagattatacaaaatcttttac--gataaacgcttatgctataagcacttaattaagttgtttatcc 159  Q
    |||||||||||||||| |||||||||||||   ||| ||||||| || | ||||   ||||||||||| ||||| | |||| ||||||| ||||||||||    
T  740953 ttgactttattttatcttttgttatagaaaaaatagcttatacataagcatttatatgataaacgcttctgctacaggcacgtaattaaattgtttatcc 741052  T
Q  160 aaaa 163  Q
    ||||    
T  741053 aaaa 741056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 162
Target Start/End: Original strand, 9041566 - 9041604
Alignment:
Q  124 gcttatgctataagcacttaattaagttgtttatccaaa 162  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  9041566 gcttatgctataagcgcttaattaagttgtttatccaaa 9041604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 133
Target Start/End: Complemental strand, 22742351 - 22742278
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaatagattat--acaaaatcttttacgataaacgcttatgcta 133  Q
    ||||||||||||||||||||||||||||| |||||| ||||  | || | ||| |||||||| |||||||||||    
T  22742351 aatttgactttattttatcctttgttatacaaatagcttatagataagaacttatacgataagcgcttatgcta 22742278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 64 - 167
Target Start/End: Complemental strand, 32975961 - 32975856
Alignment:
Q  64 tttgactttattttatcctttgttatagaaatagattatacaaaatc--ttttacgataaacgcttatgctataagcacttaattaagttgtttatccaa 161  Q
    ||||||||||||||||  ||||||| |||||||  ||||||| || |  || || || || |||||||||||||| | ||||||||||||||||||| ||    
T  32975961 tttgactttattttatattttgttacagaaataacttatacataaacacttatatgagaagcgcttatgctataaacgcttaattaagttgtttatctaa 32975862  T
Q  162 aaaggg 167  Q
    | ||||    
T  32975861 acaggg 32975856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 152
Target Start/End: Original strand, 8349749 - 8349841
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaatagattatacaaaatc--ttttacgataaacgcttatgctataagcacttaattaagttg 152  Q
    ||||| ||||||||||||| ||||||| |||||||| ||||||| || |  || || |||||  | ||||||||||||| |||||||||||||    
T  8349749 aatttaactttattttatcttttgttagagaaatagtttatacacaaacacttatatgataagtggttatgctataagcgcttaattaagttg 8349841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 14340954 - 14340990
Alignment:
Q  126 ttatgctataagcacttaattaagttgtttatccaaa 162  Q
    ||||| |||||||||||||||||||||||||||||||    
T  14340954 ttatgttataagcacttaattaagttgtttatccaaa 14340990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 161
Target Start/End: Original strand, 7268042 - 7268085
Alignment:
Q  118 ataaacgcttatgctataagcacttaattaagttgtttatccaa 161  Q
    |||||| ||||| |||||| ||||||||||||||||||||||||    
T  7268042 ataaacacttatactataaacacttaattaagttgtttatccaa 7268085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 105
Target Start/End: Original strand, 24836284 - 24836327
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaatagattataca 105  Q
    ||||||||||||||||||| |||||||||||||||  |||||||    
T  24836284 aatttgactttattttatcttttgttatagaaataacttataca 24836327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 162
Target Start/End: Original strand, 28130030 - 28130112
Alignment:
Q  82 tttgttatagaaatagattatacaaaat--cttttacgataaacgcttatgctataagcacttaattaagttgtttatccaaa 162  Q
    |||||||||||||||| ||| ||| ||   ||| || |||| ||||||||||||||||||||||||||  |||||| ||||||    
T  28130030 tttgttatagaaatagcttaaacacaagtacttatatgatagacgcttatgctataagcacttaattatattgtttgtccaaa 28130112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 105
Target Start/End: Complemental strand, 29269881 - 29269838
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaatagattataca 105  Q
    ||||||||||||||||||| | |||||||||||||| |||||||    
T  29269881 aatttgactttattttatcttctgttatagaaatagtttataca 29269838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 105
Target Start/End: Original strand, 29274314 - 29274357
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaatagattataca 105  Q
    ||||||||||||||||||| |||| ||||||||||| |||||||    
T  29274314 aatttgactttattttatcttttgctatagaaatagcttataca 29274357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 161
Target Start/End: Original strand, 3217275 - 3217376
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaatagattatacaaaatc--ttttacgataaacgcttatgctataagcacttaattaagttgtttatcc 159  Q
    ||||||||||||||||||| | | ||| | |||||| ||||||| || |  || || ||||| ||||||| ||||||||||||||| || ||||||| ||    
T  3217275 aatttgactttattttatcttctcttacaaaaatagcttatacataagcacttatatgataatcgcttatactataagcacttaataaatttgtttaacc 3217374  T
Q  160 aa 161  Q
    ||    
T  3217375 aa 3217376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 96
Target Start/End: Complemental strand, 4006699 - 4006665
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaata 96  Q
    ||||||||||||||||||| |||||||||||||||    
T  4006699 aatttgactttattttatcatttgttatagaaata 4006665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 105
Target Start/End: Complemental strand, 2514685 - 2514644
Alignment:
Q  64 tttgactttattttatcctttgttatagaaatagattataca 105  Q
    ||||||||||||||||| ||| |||||||||||| |||||||    
T  2514685 tttgactttattttatcttttattatagaaatagcttataca 2514644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 103
Target Start/End: Complemental strand, 4248943 - 4248902
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaatagattata 103  Q
    ||||||||||||||||||| |||||||| ||||||| |||||    
T  4248943 aatttgactttattttatcttttgttattgaaatagcttata 4248902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 162
Target Start/End: Original strand, 4324575 - 4324616
Alignment:
Q  121 aacgcttatgctataagcacttaattaagttgtttatccaaa 162  Q
    |||| |||||||| |||||||||||||| |||||||||||||    
T  4324575 aacgtttatgctaaaagcacttaattaaattgtttatccaaa 4324616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 105
Target Start/End: Complemental strand, 4420600 - 4420559
Alignment:
Q  64 tttgactttattttatcctttgttatagaaatagattataca 105  Q
    ||||||||||||||||| |||||||||||| ||| |||||||    
T  4420600 tttgactttattttatcttttgttatagaagtagcttataca 4420559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 168
Target Start/End: Original strand, 7480265 - 7480306
Alignment:
Q  127 tatgctataagcacttaattaagttgtttatccaaaaagggc 168  Q
    |||| ||||||||||||| ||||||||||||||||| |||||    
T  7480265 tatgttataagcacttaactaagttgtttatccaaacagggc 7480306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 30004822 - 30004785
Alignment:
Q  125 cttatgctataagcacttaattaagttgtttatccaaa 162  Q
    ||||||||||||||||| |||||| |||||||||||||    
T  30004822 cttatgctataagcactcaattaaattgtttatccaaa 30004785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 97
Target Start/End: Complemental strand, 30865465 - 30865432
Alignment:
Q  64 tttgactttattttatcctttgttatagaaatag 97  Q
    ||||||||||||||||| ||||||||||||||||    
T  30865465 tttgactttattttatcttttgttatagaaatag 30865432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 162
Target Start/End: Original strand, 31807984 - 31808013
Alignment:
Q  133 ataagcacttaattaagttgtttatccaaa 162  Q
    ||||||||||||||||||||||||||||||    
T  31807984 ataagcacttaattaagttgtttatccaaa 31808013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 162
Target Start/End: Original strand, 33818102 - 33818139
Alignment:
Q  125 cttatgctataagcacttaattaagttgtttatccaaa 162  Q
    |||||||||||| |||||||||||||||| ||||||||    
T  33818102 cttatgctataaacacttaattaagttgtatatccaaa 33818139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 162
Target Start/End: Complemental strand, 34404350 - 34404321
Alignment:
Q  133 ataagcacttaattaagttgtttatccaaa 162  Q
    ||||||||||||||||||||||||||||||    
T  34404350 ataagcacttaattaagttgtttatccaaa 34404321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 2785819 - 2785855
Alignment:
Q  126 ttatgctataagcacttaattaagttgtttatccaaa 162  Q
    |||||||||||||  ||||||||||||||||||||||    
T  2785819 ttatgctataagcgattaattaagttgtttatccaaa 2785855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 4046203 - 4046239
Alignment:
Q  126 ttatgctataagcacttaattaagttgtttatccaaa 162  Q
    ||||| |||||||| ||||||||||||||||||||||    
T  4046203 ttatggtataagcatttaattaagttgtttatccaaa 4046239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 96
Target Start/End: Complemental strand, 5328957 - 5328925
Alignment:
Q  64 tttgactttattttatcctttgttatagaaata 96  Q
    ||||||||||||||||| |||||||||||||||    
T  5328957 tttgactttattttatcttttgttatagaaata 5328925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 161
Target Start/End: Original strand, 6078431 - 6078475
Alignment:
Q  117 gataaacgcttatgctataagcacttaattaagttgtttatccaa 161  Q
    ||||| |||||||| ||||| | ||||||||||||||||||||||    
T  6078431 gataagcgcttatgttataaccgcttaattaagttgtttatccaa 6078475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 161
Target Start/End: Complemental strand, 8817139 - 8817107
Alignment:
Q  129 tgctataagcacttaattaagttgtttatccaa 161  Q
    |||||||||||||||||||||||||||| ||||    
T  8817139 tgctataagcacttaattaagttgtttacccaa 8817107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 110
Target Start/End: Original strand, 20671950 - 20671998
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaatagattatacaaaatc 110  Q
    ||||||||||||||||||| |||| | ||||||||| ||||||| ||||    
T  20671950 aatttgactttattttatcttttgatctagaaatagcttatacataatc 20671998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 158
Target Start/End: Complemental strand, 32408865 - 32408833
Alignment:
Q  126 ttatgctataagcacttaattaagttgtttatc 158  Q
    ||||||||||| |||||||||||||||||||||    
T  32408865 ttatgctataaacacttaattaagttgtttatc 32408833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 161
Target Start/End: Complemental strand, 32917151 - 32917107
Alignment:
Q  117 gataaacgcttatgctataagcacttaattaagttgtttatccaa 161  Q
    ||||||||  || ||||||||| ||||||||||||||||||||||    
T  32917151 gataaacgtctacgctataagcgcttaattaagttgtttatccaa 32917107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 167
Target Start/End: Complemental strand, 27561 - 27454
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaatagattatacaaaatcttttac--gataaacgcttatgctataagcacttaattaagttgtttatcc 159  Q
    ||||||||||||||||||| | |||||||||||||  ||||||| || |  ||||  |||||  |||||||||||||||  ||| |||||||||||||||    
T  27561 aatttgactttattttatcttctgttatagaaataacttatacataagcacttacatgataagagcttatgctataagcgtttatttaagttgtttatcc 27462  T
Q  160 aaaaaggg 167  Q
    ||| ||||    
T  27461 aaacaggg 27454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 168
Target Start/End: Original strand, 37308214 - 37308258
Alignment:
Q  124 gcttatgctataagcacttaattaagttgtttatccaaaaagggc 168  Q
    ||||||||||||||||||||||||||||||||||||||| |||||    
T  37308214 gcttatgctataagcacttaattaagttgtttatccaaacagggc 37308258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 162
Target Start/End: Original strand, 43116515 - 43116615
Alignment:
Q  64 tttgactttattttatcctttgttatagaaatagattatacaaaatc--ttttacgataaacgcttatgctataagcacttaattaagttgtttatccaa 161  Q
    ||||| || |||||||| |||||||||||||||| ||| ||| || |  || || |||||||  ||||||||||| |||| |||||||||||||||||||    
T  43116515 tttgatttgattttatcttttgttatagaaatagcttacacataaacacttgtatgataaacatttatgctataaacactaaattaagttgtttatccaa 43116614  T
Q  162 a 162  Q
    |    
T  43116615 a 43116615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 105
Target Start/End: Complemental strand, 1395656 - 1395613
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaatagattataca 105  Q
    ||||||||||||||||||| |||||||||||||||| |||||||    
T  1395656 aatttgactttattttatcttttgttatagaaatagcttataca 1395613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 168
Target Start/End: Original strand, 22214766 - 22214874
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaatagattatacaaa--atcttttacgataaacgcttatgctataagcacttaattaagttgtttatcc 159  Q
    ||||| |||||||||||||||||||||||||||||  ||||||| |    ||| ||||||||  |||| ||| |||| || ||||||| ||| |||||||    
T  22214766 aatttcactttattttatcctttgttatagaaataatttatacatacgcacttatacgataagtgcttgtgcgataaacaattaattacgttctttatcc 22214865  T
Q  160 aaaaagggc 168  Q
    ||| |||||    
T  22214866 aaacagggc 22214874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 162
Target Start/End: Complemental strand, 23785181 - 23785136
Alignment:
Q  117 gataaacgcttatgctataagcacttaattaagttgtttatccaaa 162  Q
    |||||||  |||||||||||||||||||||||||||||||| ||||    
T  23785181 gataaacatttatgctataagcacttaattaagttgtttatgcaaa 23785136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 163
Target Start/End: Complemental strand, 34857430 - 34857393
Alignment:
Q  126 ttatgctataagcacttaattaagttgtttatccaaaa 163  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  34857430 ttatgttataagcacttaattaagttgtttatccaaaa 34857393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 162
Target Start/End: Original strand, 50399505 - 50399542
Alignment:
Q  125 cttatgctataagcacttaattaagttgtttatccaaa 162  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  50399505 cttatgctataagcaattaattaagttgtttatccaaa 50399542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 105
Target Start/End: Original strand, 42084339 - 42084379
Alignment:
Q  65 ttgactttattttatcctttgttatagaaatagattataca 105  Q
    ||||| ||||||||||||||||||||||||||| |||||||    
T  42084339 ttgacattattttatcctttgttatagaaatagcttataca 42084379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 105
Target Start/End: Complemental strand, 42809308 - 42809243
Alignment:
Q  44 tgaaaacagcttatatgaaa----tttgactttattttatcctttgttatagaaatagattataca 105  Q
    ||||||||||||||||||||    ||| ||| ||||||||| |||||||||||||||| |||||||    
T  42809308 tgaaaacagcttatatgaaaacaatttaactatattttatcttttgttatagaaatagcttataca 42809243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 161
Target Start/End: Complemental strand, 44240091 - 44240047
Alignment:
Q  117 gataaacgcttatgctataagcacttaattaagttgtttatccaa 161  Q
    |||||| | |||||||||||||||||| |||||||||||||||||    
T  44240091 gataaatgattatgctataagcacttacttaagttgtttatccaa 44240047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 104
Target Start/End: Original strand, 905058 - 905097
Alignment:
Q  65 ttgactttattttatcctttgttatagaaatagattatac 104  Q
    |||||||||||||||| |||||||||||||||| ||||||    
T  905058 ttgactttattttatcttttgttatagaaatagcttatac 905097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 105
Target Start/End: Original strand, 2128336 - 2128379
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaatagattataca 105  Q
    ||||| ||||||||||||| |||||||||||||||| |||||||    
T  2128336 aatttaactttattttatcttttgttatagaaatagcttataca 2128379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 169
Target Start/End: Original strand, 2621068 - 2621111
Alignment:
Q  126 ttatgctataagcacttaattaagttgtttatccaaaaagggct 169  Q
    |||||| ||||||| || ||||||||||||||||||||||||||    
T  2621068 ttatgcaataagcatttcattaagttgtttatccaaaaagggct 2621111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 104
Target Start/End: Complemental strand, 34318074 - 34318031
Alignment:
Q  61 aaatttgactttattttatcctttgttatagaaatagattatac 104  Q
    |||||||||||||||||||  |||||||||||||||| ||||||    
T  34318074 aaatttgactttattttatattttgttatagaaatagcttatac 34318031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 103
Target Start/End: Original strand, 49587003 - 49587042
Alignment:
Q  64 tttgactttattttatcctttgttatagaaatagattata 103  Q
    ||||||||||||||||| |||||||||||||||| |||||    
T  49587003 tttgactttattttatcttttgttatagaaatagcttata 49587042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 162
Target Start/End: Original strand, 52324021 - 52324064
Alignment:
Q  119 taaacgcttatgctataagcacttaattaagttgtttatccaaa 162  Q
    ||||| ||||||||||||||||||||||||||| ||||| ||||    
T  52324021 taaacacttatgctataagcacttaattaagttatttatacaaa 52324064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 162
Target Start/End: Original strand, 24235817 - 24235855
Alignment:
Q  124 gcttatgctataagcacttaattaagttgtttatccaaa 162  Q
    ||||||| ||||| |||||||||||||||||||||||||    
T  24235817 gcttatgttataaacacttaattaagttgtttatccaaa 24235855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 96
Target Start/End: Complemental strand, 26990719 - 26990685
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaata 96  Q
    ||||||||||||||||||| |||||||||||||||    
T  26990719 aatttgactttattttatcttttgttatagaaata 26990685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 20192693 - 20192734
Alignment:
Q  64 tttgactttattttatcctttgttatagaaatagattataca 105  Q
    ||||||||||||||||| ||||||||| |||||| |||||||    
T  20192693 tttgactttattttatcttttgttatataaatagcttataca 20192734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 105
Target Start/End: Complemental strand, 22232809 - 22232768
Alignment:
Q  64 tttgactttattttatcctttgttatagaaatagattataca 105  Q
    ||||||||||||||||| ||||||||| |||||| |||||||    
T  22232809 tttgactttattttatcatttgttatataaatagcttataca 22232768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 162
Target Start/End: Original strand, 24625392 - 24625429
Alignment:
Q  125 cttatgctataagcacttaattaagttgtttatccaaa 162  Q
    |||||||||||||| ||||||||||||| |||||||||    
T  24625392 cttatgctataagcgcttaattaagttgcttatccaaa 24625429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 105
Target Start/End: Original strand, 35394792 - 35394829
Alignment:
Q  68 actttattttatcctttgttatagaaatagattataca 105  Q
    ||||||||||||| ||| ||||||||||||||||||||    
T  35394792 actttattttatcttttattatagaaatagattataca 35394829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 40122839 - 40122880
Alignment:
Q  64 tttgactttattttatcctttgttatagaaatagattataca 105  Q
    ||||||||||||||||| |||||||| ||||||| |||||||    
T  40122839 tttgactttattttatcttttgttattgaaatagcttataca 40122880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 102
Target Start/End: Original strand, 15304432 - 15304472
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaatagattat 102  Q
    ||||| ||||||||||||| |||||||||||||||| ||||    
T  15304432 aatttaactttattttatcttttgttatagaaatagcttat 15304472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 20874451 - 20874487
Alignment:
Q  126 ttatgctataagcacttaattaagttgtttatccaaa 162  Q
    ||||||||||||  |||||||||||||||||||||||    
T  20874451 ttatgctataagtgcttaattaagttgtttatccaaa 20874487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 21574411 - 21574375
Alignment:
Q  126 ttatgctataagcacttaattaagttgtttatccaaa 162  Q
    |||| |||||||||||||||||||| |||||||||||    
T  21574411 ttatactataagcacttaattaagtagtttatccaaa 21574375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 158
Target Start/End: Complemental strand, 22723981 - 22723949
Alignment:
Q  126 ttatgctataagcacttaattaagttgtttatc 158  Q
    ||||||||||||| |||||||||||||||||||    
T  22723981 ttatgctataagcgcttaattaagttgtttatc 22723949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 94
Target Start/End: Complemental strand, 25195409 - 25195377
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaa 94  Q
    ||||||||||||||||||| |||||||||||||    
T  25195409 aatttgactttattttatcttttgttatagaaa 25195377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 105
Target Start/End: Original strand, 41028939 - 41028979
Alignment:
Q  65 ttgactttattttatcctttgttatagaaatagattataca 105  Q
    ||||||||||||| || |||||||||||||||| |||||||    
T  41028939 ttgactttattttttcttttgttatagaaatagcttataca 41028979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 110
Target Start/End: Original strand, 48364964 - 48365012
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaatagattatacaaaatc 110  Q
    ||||||||||||||||||| |||||||| ||||||  ||||||| ||||    
T  48364964 aatttgactttattttatcttttgttatcgaaataacttatacataatc 48365012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 96
Target Start/End: Complemental strand, 54775111 - 54775079
Alignment:
Q  64 tttgactttattttatcctttgttatagaaata 96  Q
    ||||||||||||||||| |||||||||||||||    
T  54775111 tttgactttattttatcttttgttatagaaata 54775079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 62 - 158
Target Start/End: Complemental strand, 31461423 - 31461325
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaatagattatacaaaa--tcttttacgataaacgcttatgctataagcacttaattaagttgtttatc 158  Q
    ||||||||||||||||||| |||||||||||||||| ||||| | ||   ||| || |||| ||| |||||||| |||  |||||||||||||||||||    
T  31461423 aatttgactttattttatcttttgttatagaaatagcttatatataaccacttatatgatatacgtttatgctagaagtgcttaattaagttgtttatc 31461325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 64 - 162
Target Start/End: Original strand, 32098395 - 32098498
Alignment:
Q  64 tttgactttattttatcctttgttatagaaatagattatacaaaatcttttac-----gataaacgcttatgctataagcacttaattaagttgtttatc 158  Q
    ||||||||||||||||| |||||||||||||||| ||||| | || | ||||      |||||  | ||||||||||||||||||| |||||||||||||    
T  32098395 tttgactttattttatcttttgttatagaaatagcttatatataagcatttagtatatgataactgtttatgctataagcacttaagtaagttgtttatc 32098494  T
Q  159 caaa 162  Q
    ||||    
T  32098495 caaa 32098498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 137
Target Start/End: Complemental strand, 35459895 - 35459818
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaatagattatacaaaat--cttttacgataaacgcttatgctataag 137  Q
    ||||||||||||||||||| |||| |||| |||||| |||||||||||  ||| || ||||||| |||||||||||||    
T  35459895 aatttgactttattttatcttttggtatacaaatagcttatacaaaatcacttatatgataaacacttatgctataag 35459818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 162
Target Start/End: Complemental strand, 5133750 - 5133654
Alignment:
Q  69 ctttattttatcctttgttatagaaatagattatacaaaatcttttacgataaacgcttatgct---ataagcacttaattaagttgtttatccaaa 162  Q
    |||||||||||| |||||||||||||||| ||||||| || |   || |||||  |||||||||   |||| |||||||||||| ||||||||||||    
T  5133750 ctttattttatcttttgttatagaaatagcttatacataagcaaatatgataagtgcttatgctataataaacacttaattaagctgtttatccaaa 5133654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 126 - 168
Target Start/End: Original strand, 5752751 - 5752793
Alignment:
Q  126 ttatgctataagcacttaattaagttgtttatccaaaaagggc 168  Q
    |||||||||||||| |||||||||||||||||||||| |||||    
T  5752751 ttatgctataagcagttaattaagttgtttatccaaacagggc 5752793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 9477899 - 9477862
Alignment:
Q  125 cttatgctataagcacttaattaagttgtttatccaaa 162  Q
    |||||||||||| |||||||||||||||||||||||||    
T  9477899 cttatgctataaacacttaattaagttgtttatccaaa 9477862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 103
Target Start/End: Original strand, 17952788 - 17952827
Alignment:
Q  64 tttgactttattttatcctttgttatagaaatagattata 103  Q
    ||||||||||||||||| |||||||||||||||| |||||    
T  17952788 tttgactttattttatcttttgttatagaaatagcttata 17952827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 105
Target Start/End: Original strand, 40837513 - 40837556
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaatagattataca 105  Q
    |||||||||||| |||||| |||||||||||||||| |||||||    
T  40837513 aatttgactttaatttatcttttgttatagaaatagcttataca 40837556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 162
Target Start/End: Complemental strand, 40851517 - 40851478
Alignment:
Q  123 cgcttatgctataagcacttaattaagttgtttatccaaa 162  Q
    |||||||| |||||| ||||||||||||||||||||||||    
T  40851517 cgcttatgatataagtacttaattaagttgtttatccaaa 40851478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 148
Target Start/End: Original strand, 42817518 - 42817549
Alignment:
Q  117 gataaacgcttatgctataagcacttaattaa 148  Q
    ||||||||||||||||||||||||||||||||    
T  42817518 gataaacgcttatgctataagcacttaattaa 42817549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 162
Target Start/End: Complemental strand, 5942846 - 5942808
Alignment:
Q  124 gcttatgctataagcacttaattaagttgtttatccaaa 162  Q
    |||||||| |||||| |||||||||||||||||||||||    
T  5942846 gcttatgcaataagcgcttaattaagttgtttatccaaa 5942808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 161
Target Start/End: Original strand, 10198567 - 10198664
Alignment:
Q  66 tgactttattttatcctttgttatagaaatagattatacaaaat--cttttacgataaacgcttatgctataagcacttaattaagttgtttatccaa 161  Q
    ||||||||||||||| ||  |||||  ||||| ||||||||||   ||| || ||||| | || ||||||||||||| ||||||||||||| ||||||    
T  10198567 tgactttattttatctttacttatatgaatagcttatacaaaagtacttatatgataagcactcatgctataagcacctaattaagttgttaatccaa 10198664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 162
Target Start/End: Original strand, 14316952 - 14317006
Alignment:
Q  108 atcttttacgataaacgcttatgctataagcacttaattaagttgtttatccaaa 162  Q
    ||||| ||| |||| | |||||||||||||| ||||||||| |||||||||||||    
T  14316952 atcttatacaataagcacttatgctataagcgcttaattaatttgtttatccaaa 14317006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 162
Target Start/End: Complemental strand, 15171171 - 15171133
Alignment:
Q  124 gcttatgctataagcacttaattaagttgtttatccaaa 162  Q
    ||||||||||||| |||||||||||||| ||||||||||    
T  15171171 gcttatgctataaacacttaattaagttatttatccaaa 15171133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 105
Target Start/End: Original strand, 33267581 - 33267644
Alignment:
Q  46 aaaacagcttatatgaaa----tttgactttattttatcctttgttatagaaatagattataca 105  Q
    ||||||||||||||||||    ||| |||||||||||   ||||||||||||||||||||||||    
T  33267581 aaaacagcttatatgaaaacagtttaactttattttactgtttgttatagaaatagattataca 33267644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 158
Target Start/End: Complemental strand, 39866514 - 39866476
Alignment:
Q  120 aaacgcttatgctataagcacttaattaagttgtttatc 158  Q
    ||||||||||||||||||| || ||||||||||||||||    
T  39866514 aaacgcttatgctataagctctaaattaagttgtttatc 39866476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 162
Target Start/End: Original strand, 3080281 - 3080374
Alignment:
Q  70 tttattttatcctttgttatagaaa-tagattatacaaaatcttttacgataaacgcttatgctataagcacttaattaagttgtttatccaaa 162  Q
    ||||||||||| ||||||||| ||| ||| || ||||||  ||| ||  |||| |  ||||||||||||||||||||||| |||||||| ||||    
T  3080281 tttattttatcttttgttataaaaaatagcttctacaaacacttgtataataagcagttatgctataagcacttaattaatttgtttatacaaa 3080374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 3458662 - 3458608
Alignment:
Q  46 aaaacagcttatatgaaa----tttgactttattttatcctttgttatagaaata 96  Q
    ||||||||||||||||||    ||||||||||||||||| ||||||||| |||||    
T  3458662 aaaacagcttatatgaaaaaagtttgactttattttatcttttgttataaaaata 3458608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 7936961 - 7936924
Alignment:
Q  125 cttatgctataagcacttaattaagttgtttatccaaa 162  Q
    |||||| || ||||||||||||||||||||||||||||    
T  7936961 cttatgttaaaagcacttaattaagttgtttatccaaa 7936924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 162
Target Start/End: Original strand, 29316925 - 29316962
Alignment:
Q  125 cttatgctataagcacttaattaagttgtttatccaaa 162  Q
    |||||||| ||| |||||||||||||||||||||||||    
T  29316925 cttatgctgtaaacacttaattaagttgtttatccaaa 29316962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 105
Target Start/End: Complemental strand, 37034027 - 37033986
Alignment:
Q  64 tttgactttattttatcctttgttatagaaatagattataca 105  Q
    ||||||||||||||||| ||| |||||||||||| |||||||    
T  37034027 tttgactttattttatctttttttatagaaatagtttataca 37033986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 38239638 - 38239679
Alignment:
Q  64 tttgactttattttatcctttgttatagaaatagattataca 105  Q
    |||||||| |||||||| |||||||||||||||| |||||||    
T  38239638 tttgacttgattttatcttttgttatagaaatagcttataca 38239679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 103
Target Start/End: Complemental strand, 40759008 - 40758967
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaatagattata 103  Q
    ||||||||||||||||||| |||||||| ||||||| |||||    
T  40759008 aatttgactttattttatcttttgttatggaaatagcttata 40758967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 162
Target Start/End: Complemental strand, 42974335 - 42974235
Alignment:
Q  64 tttgactttattttatcctttgttatagaaatagattatacaaaatcttt--tacgataaacgcttatgctataagcacttaattaagttgtttatccaa 161  Q
    ||||||||||| | | | |||||||||||||||| ||||||| || |  |  || |||||  | ||||||||||||| ||||||||||||| ||||||||    
T  42974335 tttgactttatatgaccttttgttatagaaatagtttatacacaagcactaatatgataagtgtttatgctataagctcttaattaagttgcttatccaa 42974236  T
Q  162 a 162  Q
    |    
T  42974235 a 42974235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 105
Target Start/End: Original strand, 5045245 - 5045285
Alignment:
Q  65 ttgactttattttatcctttgttatagaaatagattataca 105  Q
    |||||||||||||||| ||||||||| |||||| |||||||    
T  5045245 ttgactttattttatcttttgttataaaaatagcttataca 5045285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 94
Target Start/End: Complemental strand, 6988100 - 6988068
Alignment:
Q  62 aatttgactttattttatcctttgttatagaaa 94  Q
    ||||||||||||||||||| |||||||||||||    
T  6988100 aatttgactttattttatcttttgttatagaaa 6988068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 167
Target Start/End: Original strand, 15203829 - 15203857
Alignment:
Q  139 acttaattaagttgtttatccaaaaaggg 167  Q
    |||||||||||||||||||||||||||||    
T  15203829 acttaattaagttgtttatccaaaaaggg 15203857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 105
Target Start/End: Complemental strand, 25609778 - 25609738
Alignment:
Q  65 ttgactttattttatcctttgttatagaaatagattataca 105  Q
    |||||||||||||||| ||| |||||||||||| |||||||    
T  25609778 ttgactttattttatcttttcttatagaaatagcttataca 25609738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 25790109 - 25790037
Alignment:
Q  64 tttgactttattttatcctttgttatagaaatagattatacaaaatcttttacgataaacgcttatgctataa 136  Q
    |||||||| | |||||| ||| ||||||||||| |||||||| || ||| || ||||| ||||||| ||||||    
T  25790109 tttgacttcactttatctttttttatagaaatatattatacataaacttatatgataagcgcttatactataa 25790037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 162
Target Start/End: Complemental strand, 34005897 - 34005869
Alignment:
Q  134 taagcacttaattaagttgtttatccaaa 162  Q
    |||||||||||||||||||||||||||||    
T  34005897 taagcacttaattaagttgtttatccaaa 34005869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 169
Target Start/End: Original strand, 40722618 - 40722654
Alignment:
Q  133 ataagcacttaattaagttgtttatccaaaaagggct 169  Q
    |||||||||| ||||||||||||||||||| ||||||    
T  40722618 ataagcacttgattaagttgtttatccaaacagggct 40722654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 167
Target Start/End: Original strand, 26190 - 26233
Alignment:
Q  124 gcttatgctataagcacttaattaagttgtttatccaaaaaggg 167  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  26190 gcttatgctataagcacttaattaaggtgtttatccaaagaggg 26233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 162
Target Start/End: Original strand, 34062 - 34099
Alignment:
Q  125 cttatgctataagcacttaattaagttgtttatccaaa 162  Q
    |||||||||||||| |||||||||||||||||||||||    
T  34062 cttatgctataagctcttaattaagttgtttatccaaa 34099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 103
Target Start/End: Original strand, 4310 - 4350
Alignment:
Q  64 tttgactttattttatc-ctttgttatagaaatagattata 103  Q
    ||||||||||||||||| |||| ||||||||||||||||||    
T  4310 tttgactttattttatctcttttttatagaaatagattata 4350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0455 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0455
Description:

Target: scaffold0455; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 162
Target Start/End: Original strand, 8617 - 8699
Alignment:
Q  82 tttgttatagaaatagattatacaaaat--cttttacgataaacgcttatgctataagcacttaattaagttgtttatccaaa 162  Q
    |||||||||||||||| ||| ||| ||   ||| || |||| ||||||||||||||||||||||||||  |||||| ||||||    
T  8617 tttgttatagaaatagcttaaacacaagtacttatatgatagacgcttatgctataagcacttaattatattgtttgtccaaa 8699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 4063 - 4026
Alignment:
Q  125 cttatgctataagcacttaattaagttgtttatccaaa 162  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  4063 cttatactataagcactcaattaagttgtttatccaaa 4026  T

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Target: scaffold0091 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 161
Target Start/End: Complemental strand, 5999 - 5903
Alignment:
Q  67 gactttattttatcctttgttatagaaatagattatacaaaatc--ttttacgataaacgcttatgctataagcacttaattaagttgtttatccaa 161  Q
    ||||| |||||||| |||||||| ||||| | ||||||| || |  || || |||||| | ||||||||||| || || ||||||||||||||||||    
T  5999 gacttgattttatcttttgttattgaaattgtttatacataaacacttatatgataaatgtttatgctataaacagttgattaagttgtttatccaa 5903  T

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