View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0304_low_19 (Length: 252)

Name: NF0304_low_19
Description: NF0304
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0304_low_19
NF0304_low_19
[»] chr6 (35 HSPs)
chr6 (118-252)||(33695258-33695392)
chr6 (118-252)||(33696696-33696830)
chr6 (118-252)||(17705396-17705530)
chr6 (118-252)||(28675148-28675282)
chr6 (118-252)||(17175952-17176086)
chr6 (118-252)||(18365504-18365638)
chr6 (118-252)||(18370768-18370902)
chr6 (118-248)||(23291019-23291149)
chr6 (117-252)||(25986929-25987064)
chr6 (118-252)||(2309354-2309488)
chr6 (118-252)||(9752176-9752309)
chr6 (118-241)||(6127275-6127399)
chr6 (118-252)||(6031672-6031806)
chr6 (121-245)||(8515664-8515787)
chr6 (124-252)||(11548519-11548647)
chr6 (116-252)||(32702205-32702339)
chr6 (118-197)||(18889683-18889761)
chr6 (122-195)||(29693639-29693712)
chr6 (122-195)||(17175820-17175892)
chr6 (122-195)||(32702399-32702471)
chr6 (122-195)||(33696891-33696963)
chr6 (130-195)||(6031547-6031611)
chr6 (122-195)||(11548388-11548460)
chr6 (122-195)||(18365373-18365445)
chr6 (122-195)||(18370637-18370709)
chr6 (122-195)||(28675342-28675414)
chr6 (122-185)||(34238886-34238948)
chr6 (130-195)||(582534-582600)
chr6 (122-188)||(17705268-17705333)
chr6 (122-195)||(2309222-2309294)
chr6 (158-195)||(18889478-18889515)
chr6 (122-195)||(23290880-23290952)
chr6 (122-195)||(33695125-33695197)
chr6 (151-181)||(18889593-18889623)
chr6 (222-252)||(29693542-29693572)
[»] chr4 (56 HSPs)
chr4 (118-252)||(10442720-10442854)
chr4 (118-252)||(21802253-21802387)
chr4 (118-252)||(31078750-31078884)
chr4 (119-252)||(7745043-7745176)
chr4 (118-252)||(47290066-47290200)
chr4 (118-252)||(49387819-49387953)
chr4 (118-252)||(24128239-24128373)
chr4 (118-252)||(36072947-36073081)
chr4 (118-249)||(44893426-44893557)
chr4 (118-248)||(22199261-22199391)
chr4 (118-252)||(33530619-33530753)
chr4 (118-252)||(53123030-53123165)
chr4 (118-252)||(4751446-4751580)
chr4 (118-252)||(46441844-46441978)
chr4 (118-252)||(2624837-2624971)
chr4 (118-252)||(23964396-23964530)
chr4 (118-252)||(50156509-50156643)
chr4 (113-249)||(44893147-44893284)
chr4 (118-252)||(24392667-24392801)
chr4 (122-252)||(36073354-36073484)
chr4 (146-252)||(9088898-9089004)
chr4 (150-252)||(17655462-17655564)
chr4 (118-252)||(37934872-37935006)
chr4 (124-240)||(42671675-42671791)
chr4 (131-252)||(36073674-36073795)
chr4 (146-252)||(30563237-30563343)
chr4 (164-252)||(37219671-37219759)
chr4 (135-252)||(44744452-44744568)
chr4 (162-233)||(11314184-11314255)
chr4 (122-195)||(36073543-36073615)
chr4 (122-195)||(46442038-46442110)
chr4 (122-195)||(9089064-9089136)
chr4 (122-195)||(10442586-10442658)
chr4 (122-195)||(44893012-44893084)
chr4 (122-195)||(44893620-44893692)
chr4 (122-195)||(47290260-47290332)
chr4 (122-195)||(53123225-53123297)
chr4 (122-185)||(25063373-25063436)
chr4 (122-195)||(22199453-22199525)
chr4 (122-195)||(31078618-31078690)
chr4 (122-195)||(36073145-36073217)
chr4 (130-195)||(37219825-37219890)
chr4 (130-195)||(49387694-49387758)
chr4 (122-194)||(11314050-11314122)
chr4 (122-195)||(4751641-4751713)
chr4 (130-195)||(7744919-7744983)
chr4 (122-195)||(17655624-17655697)
chr4 (122-195)||(21802119-21802191)
chr4 (122-195)||(24128433-24128505)
chr4 (122-195)||(33530483-33530555)
chr4 (130-184)||(42671873-42671927)
chr4 (130-188)||(50156386-50156443)
chr4 (130-195)||(2625031-2625095)
chr4 (130-195)||(23964271-23964335)
chr4 (190-249)||(9111337-9111396)
chr4 (122-195)||(24392868-24392940)
[»] chr2 (35 HSPs)
chr2 (118-252)||(9293507-9293641)
chr2 (118-252)||(35160757-35160891)
chr2 (119-252)||(10661888-10662021)
chr2 (118-252)||(23267993-23268127)
chr2 (118-252)||(21936081-21936216)
chr2 (117-252)||(33380206-33380341)
chr2 (118-252)||(7475439-7475573)
chr2 (112-248)||(14941302-14941437)
chr2 (121-252)||(31174765-31174896)
chr2 (118-252)||(13354846-13354981)
chr2 (118-236)||(43330912-43331030)
chr2 (118-245)||(27847632-27847759)
chr2 (116-244)||(9723403-9723531)
chr2 (146-252)||(3989104-3989210)
chr2 (120-238)||(21393633-21393751)
chr2 (130-244)||(22591494-22591608)
chr2 (128-252)||(16767403-16767527)
chr2 (158-234)||(37335753-37335829)
chr2 (122-195)||(33380401-33380473)
chr2 (122-195)||(35160953-35161025)
chr2 (122-196)||(22592905-22592979)
chr2 (190-252)||(40262667-40262729)
chr2 (122-195)||(10662082-10662154)
chr2 (122-195)||(23267861-23267933)
chr2 (122-195)||(7475307-7475379)
chr2 (130-195)||(9723600-9723665)
chr2 (122-195)||(43331106-43331178)
chr2 (122-195)||(9293374-9293446)
chr2 (122-195)||(13355042-13355114)
chr2 (122-195)||(3989270-3989342)
chr2 (122-195)||(21393485-21393556)
chr2 (122-195)||(31174634-31174706)
chr2 (160-195)||(21936276-21936311)
chr2 (157-195)||(34320990-34321028)
chr2 (121-155)||(40262714-40262748)
[»] chr8 (66 HSPs)
chr8 (118-249)||(34665382-34665513)
chr8 (118-252)||(17841781-17841915)
chr8 (118-252)||(20091732-20091866)
chr8 (118-252)||(40780060-40780194)
chr8 (118-252)||(32064745-32064879)
chr8 (118-249)||(42754976-42755107)
chr8 (118-252)||(24211484-24211618)
chr8 (111-252)||(41819709-41819850)
chr8 (118-252)||(15187560-15187695)
chr8 (118-252)||(1645896-1646030)
chr8 (118-252)||(6108164-6108298)
chr8 (118-252)||(35353041-35353175)
chr8 (122-252)||(37985986-37986116)
chr8 (118-239)||(31347726-31347847)
chr8 (119-243)||(14128865-14128989)
chr8 (118-241)||(32393858-32393981)
chr8 (123-252)||(25581170-25581299)
chr8 (119-252)||(27782048-27782181)
chr8 (121-252)||(8453837-8453968)
chr8 (118-252)||(26042044-26042181)
chr8 (118-243)||(39772741-39772866)
chr8 (117-241)||(30834989-30835112)
chr8 (118-252)||(7017796-7017930)
chr8 (128-238)||(7021988-7022098)
chr8 (122-245)||(24844797-24844919)
chr8 (146-252)||(3596972-3597078)
chr8 (118-244)||(27835392-27835518)
chr8 (146-240)||(3890560-3890653)
chr8 (146-246)||(15972814-15972914)
chr8 (126-186)||(38016979-38017039)
chr8 (122-197)||(3890413-3890488)
chr8 (118-184)||(37132657-37132723)
chr8 (122-195)||(1503642-1503714)
chr8 (122-195)||(17841649-17841721)
chr8 (122-195)||(26041912-26041984)
chr8 (122-195)||(40779928-40780000)
chr8 (122-195)||(6108032-6108104)
chr8 (122-195)||(10044542-10044614)
chr8 (122-195)||(14129053-14129125)
chr8 (122-195)||(31347575-31347647)
chr8 (122-195)||(37985855-37985927)
chr8 (129-197)||(35353233-35353300)
chr8 (165-240)||(10044390-10044465)
chr8 (122-195)||(3596840-3596912)
chr8 (122-195)||(20091600-20091672)
chr8 (122-195)||(24211171-24211243)
chr8 (122-195)||(25581038-25581110)
chr8 (122-195)||(32064940-32065012)
chr8 (122-195)||(34665575-34665647)
chr8 (122-195)||(37132479-37132552)
chr8 (122-195)||(42754841-42754913)
chr8 (122-195)||(1645763-1645835)
chr8 (146-199)||(3817914-3817967)
chr8 (122-195)||(15187754-15187826)
chr8 (130-195)||(30834862-30834927)
chr8 (130-181)||(1886621-1886672)
chr8 (122-197)||(30055708-30055782)
chr8 (118-198)||(30055543-30055616)
chr8 (158-195)||(8454027-8454064)
chr8 (126-195)||(32394051-32394118)
chr8 (130-195)||(39772609-39772673)
chr8 (130-197)||(24844667-24844734)
chr8 (122-195)||(38017126-38017199)
chr8 (212-241)||(37132618-37132647)
chr8 (146-195)||(41819590-41819639)
chr8 (216-252)||(30055615-30055650)
[»] chr1 (49 HSPs)
chr1 (113-252)||(40214983-40215122)
chr1 (118-252)||(19015404-19015538)
chr1 (118-252)||(25463676-25463810)
chr1 (118-252)||(44094698-44094832)
chr1 (118-241)||(18404442-18404565)
chr1 (118-249)||(37821768-37821899)
chr1 (118-252)||(6883487-6883621)
chr1 (118-252)||(36966639-36966773)
chr1 (118-252)||(9910224-9910358)
chr1 (121-252)||(3559620-3559751)
chr1 (118-249)||(41876376-41876507)
chr1 (122-235)||(16045746-16045859)
chr1 (118-238)||(32000212-32000332)
chr1 (118-239)||(25973414-25973534)
chr1 (118-252)||(40273702-40273836)
chr1 (118-252)||(27523186-27523322)
chr1 (122-252)||(33786566-33786695)
chr1 (118-252)||(44690960-44691094)
chr1 (118-245)||(51737510-51737632)
chr1 (118-234)||(34519758-34519874)
chr1 (146-236)||(10167428-10167518)
chr1 (122-195)||(19015598-19015670)
chr1 (122-195)||(51737699-51737771)
chr1 (191-249)||(20305065-20305123)
chr1 (122-195)||(6883681-6883753)
chr1 (130-195)||(9910098-9910162)
chr1 (122-195)||(20304929-20305001)
chr1 (122-195)||(36966507-36966579)
chr1 (122-195)||(37821633-37821705)
chr1 (122-195)||(40215182-40215254)
chr1 (122-195)||(41876241-41876313)
chr1 (130-194)||(44690828-44690892)
chr1 (122-195)||(25463870-25463942)
chr1 (122-195)||(25973601-25973673)
chr1 (122-195)||(32000065-32000137)
chr1 (122-195)||(33786430-33786502)
chr1 (122-195)||(40273902-40273974)
chr1 (122-195)||(18404642-18404714)
chr1 (130-195)||(19722906-19722970)
chr1 (122-191)||(52064376-52064445)
chr1 (122-197)||(27523054-27523129)
chr1 (190-241)||(51621002-51621053)
chr1 (194-248)||(52329345-52329399)
chr1 (122-195)||(44094891-44094963)
chr1 (118-155)||(51620980-51621017)
chr1 (122-195)||(3559811-3559883)
chr1 (189-226)||(22159230-22159267)
chr1 (118-155)||(52329319-52329356)
chr1 (158-195)||(52329469-52329506)
[»] chr5 (40 HSPs)
chr5 (118-252)||(11361062-11361196)
chr5 (118-252)||(4892202-4892336)
chr5 (118-252)||(25398238-25398372)
chr5 (118-252)||(2477636-2477770)
chr5 (118-252)||(3362778-3362912)
chr5 (118-252)||(6043442-6043576)
chr5 (118-252)||(12850801-12850935)
chr5 (118-252)||(33584260-33584394)
chr5 (118-245)||(14138668-14138795)
chr5 (118-249)||(38899660-38899791)
chr5 (122-252)||(8145379-8145509)
chr5 (118-239)||(22912998-22913119)
chr5 (118-245)||(12614671-12614798)
chr5 (118-252)||(4433938-4434072)
chr5 (117-252)||(37321724-37321860)
chr5 (118-252)||(3521937-3522071)
chr5 (118-252)||(17545616-17545750)
chr5 (146-252)||(31640871-31640977)
chr5 (122-236)||(27481830-27481940)
chr5 (122-195)||(4892396-4892468)
chr5 (122-195)||(33584128-33584200)
chr5 (130-190)||(10458409-10458469)
chr5 (122-195)||(3521806-3521878)
chr5 (122-195)||(6043311-6043383)
chr5 (122-195)||(8145567-8145639)
chr5 (122-195)||(12850996-12851068)
chr5 (122-195)||(25398432-25398504)
chr5 (122-195)||(38899524-38899597)
chr5 (122-195)||(12614536-12614609)
chr5 (122-195)||(14138861-14138933)
chr5 (122-195)||(22912856-22912928)
chr5 (122-195)||(37321592-37321664)
chr5 (122-195)||(3362973-3363045)
chr5 (135-196)||(27482016-27482077)
chr5 (122-195)||(2477830-2477902)
chr5 (207-252)||(36880254-36880299)
chr5 (146-194)||(31640763-31640811)
chr5 (161-195)||(4433845-4433879)
chr5 (141-195)||(11360949-11361002)
chr5 (118-155)||(13664642-13664679)
[»] chr7 (37 HSPs)
chr7 (108-252)||(4974666-4974809)
chr7 (118-252)||(45637712-45637846)
chr7 (118-252)||(48880858-48880992)
chr7 (118-252)||(34482835-34482969)
chr7 (118-252)||(15329273-15329407)
chr7 (118-252)||(42611811-42611945)
chr7 (118-249)||(35444558-35444689)
chr7 (118-252)||(3961979-3962113)
chr7 (118-252)||(15577781-15577915)
chr7 (118-252)||(20010029-20010162)
chr7 (118-252)||(24394972-24395106)
chr7 (117-252)||(25167781-25167916)
chr7 (117-252)||(29737138-29737273)
chr7 (118-252)||(15238382-15238516)
chr7 (118-252)||(37477011-37477145)
chr7 (121-241)||(36790408-36790528)
chr7 (118-252)||(42696083-42696217)
chr7 (118-239)||(18036978-18037099)
chr7 (146-252)||(30848597-30848703)
chr7 (144-246)||(40880729-40880831)
chr7 (122-195)||(25167655-25167727)
chr7 (122-195)||(48880726-48880798)
chr7 (109-195)||(30848763-30848847)
chr7 (122-195)||(3962172-3962244)
chr7 (122-195)||(24395165-24395237)
chr7 (130-195)||(34483032-34483096)
chr7 (122-195)||(35445591-35445663)
chr7 (122-195)||(45637905-45637977)
chr7 (122-195)||(4974534-4974606)
chr7 (122-195)||(15329468-15329540)
chr7 (122-195)||(15577646-15577718)
chr7 (122-195)||(42612005-42612077)
chr7 (130-195)||(42696277-42696342)
chr7 (130-195)||(29737338-29737403)
chr7 (122-195)||(35876438-35876510)
chr7 (122-195)||(37476879-37476951)
chr7 (122-195)||(18037171-18037243)
[»] scaffold0096 (2 HSPs)
scaffold0096 (118-252)||(41011-41145)
scaffold0096 (122-195)||(41204-41276)
[»] scaffold0085 (2 HSPs)
scaffold0085 (118-252)||(47850-47984)
scaffold0085 (122-195)||(48043-48115)
[»] chr3 (59 HSPs)
chr3 (118-252)||(2754717-2754851)
chr3 (118-252)||(6041884-6042018)
chr3 (118-252)||(3137345-3137479)
chr3 (118-252)||(30385011-30385145)
chr3 (118-252)||(33113793-33113927)
chr3 (118-252)||(33145713-33145846)
chr3 (118-252)||(34482841-34482975)
chr3 (118-252)||(3574457-3574592)
chr3 (118-252)||(3456064-3456198)
chr3 (118-252)||(48160905-48161039)
chr3 (118-241)||(11347268-11347391)
chr3 (118-252)||(42297353-42297488)
chr3 (118-244)||(37216992-37217118)
chr3 (115-248)||(8320519-8320652)
chr3 (118-252)||(22426275-22426409)
chr3 (119-239)||(9796973-9797093)
chr3 (117-252)||(19650830-19650966)
chr3 (130-245)||(47738117-47738232)
chr3 (118-252)||(8361976-8362110)
chr3 (118-252)||(37522053-37522187)
chr3 (129-244)||(42921154-42921269)
chr3 (118-245)||(24343547-24343674)
chr3 (118-249)||(33839531-33839662)
chr3 (118-241)||(36864969-36865092)
chr3 (146-247)||(41883159-41883260)
chr3 (156-252)||(3089455-3089551)
chr3 (117-239)||(41224232-41224354)
chr3 (174-252)||(42297920-42297998)
chr3 (190-252)||(40327897-40327959)
chr3 (118-223)||(26612785-26612890)
chr3 (122-195)||(3137213-3137285)
chr3 (122-195)||(34482687-34482759)
chr3 (122-195)||(30385594-30385666)
chr3 (122-195)||(33113988-33114060)
chr3 (122-195)||(37522247-37522319)
chr3 (122-195)||(40328025-40328098)
chr3 (175-236)||(46918959-46919020)
chr3 (122-195)||(6042071-6042143)
chr3 (122-195)||(8320381-8320453)
chr3 (122-195)||(22426144-22426216)
chr3 (122-195)||(36864831-36864904)
chr3 (122-195)||(37216852-37216924)
chr3 (130-195)||(46919088-46919153)
chr3 (130-195)||(47738305-47738370)
chr3 (127-195)||(33839729-33839797)
chr3 (122-195)||(3089613-3089685)
chr3 (122-195)||(8361838-8361910)
chr3 (122-195)||(19650699-19650771)
chr3 (122-195)||(33145906-33145978)
chr3 (122-195)||(41224428-41224500)
chr3 (121-155)||(40327878-40327912)
chr3 (122-195)||(2754913-2754985)
chr3 (122-195)||(3456258-3456330)
chr3 (122-195)||(3574325-3574397)
chr3 (122-195)||(9796828-9796900)
chr3 (122-195)||(42921319-42921392)
chr3 (122-195)||(48161100-48161172)
chr3 (118-149)||(47402630-47402661)
chr3 (130-195)||(24343743-24343808)
[»] scaffold0471 (2 HSPs)
scaffold0471 (118-252)||(12842-12976)
scaffold0471 (122-195)||(13036-13108)
[»] scaffold0178 (2 HSPs)
scaffold0178 (108-249)||(11611-11752)
scaffold0178 (130-195)||(11815-11879)
[»] scaffold0204 (2 HSPs)
scaffold0204 (118-249)||(4396-4527)
scaffold0204 (122-195)||(4590-4662)
[»] scaffold0665 (1 HSPs)
scaffold0665 (119-243)||(3069-3193)
[»] scaffold0228 (5 HSPs)
scaffold0228 (129-252)||(8413-8536)
scaffold0228 (129-252)||(15995-16118)
scaffold0228 (129-252)||(25947-26070)
scaffold0228 (122-195)||(26130-26202)
scaffold0228 (122-195)||(16178-16250)
[»] scaffold0041 (1 HSPs)
scaffold0041 (144-246)||(85452-85554)


Alignment Details
Target: chr6 (Bit Score: 127; Significance: 1e-65; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 118 - 252
Target Start/End: Complemental strand, 33695392 - 33695258
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  33695392 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaat 33695293  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||||||||||||||||||||||||||||||    
T  33695292 taatgttagccaataaaatctcagcctggccggaa 33695258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 118 - 252
Target Start/End: Original strand, 33696696 - 33696830
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  33696696 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaat 33696795  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||||||||||||||||||||||||||||||    
T  33696796 taatgttagccaataaaatctcagcctggccggaa 33696830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 118 - 252
Target Start/End: Complemental strand, 17705530 - 17705396
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  17705530 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaat 17705431  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||||||||||||||||||| ||||||||||    
T  17705430 taatgttagccaataaaatctcagtctggccggaa 17705396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 118 - 252
Target Start/End: Original strand, 28675148 - 28675282
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||    
T  28675148 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgtcggaataatcacccttagattttatcaagaaattgtcctgaaat 28675247  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||||| ||||||||||||||||||||||||    
T  28675248 taatgttagctaataaaatctcagcctggccggaa 28675282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 118 - 252
Target Start/End: Complemental strand, 17176086 - 17175952
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||||  || ||||||    
T  17176086 gagcaatgctatatatcaagaaagattttatcaataaaatttcaagaatgacatgacagaataatcacccttagattttatcaagaaataatcatgaaat 17175987  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||||||||||||||||||||||||||||||    
T  17175986 taatgttagccaataaaatctcagcctggccggaa 17175952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 118 - 252
Target Start/End: Complemental strand, 18365638 - 18365504
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||| ||||||    
T  18365638 gagcaatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacatggcagaataatcacccttaaattttatcaagaaatagtcttgaaat 18365539  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    ||||||||||||||||||||||| |||||||||||    
T  18365538 taatgttagccaataaaatctcatcctggccggaa 18365504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 118 - 252
Target Start/End: Complemental strand, 18370902 - 18370768
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||| ||||||    
T  18370902 gagcaatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacatggcagaataatcacccttaaattttatcaagaaatagtcttgaaat 18370803  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    ||||||||||||||||||||||| |||||||||||    
T  18370802 taatgttagccaataaaatctcatcctggccggaa 18370768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 118 - 248
Target Start/End: Complemental strand, 23291149 - 23291019
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| || |||||||    
T  23291149 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagttctgaaat 23291050  T
Q  218 taatgttagccaataaaatctcagcctggcc 248  Q
    |||||||| ||||||||||||||||||||||    
T  23291049 taatgttaaccaataaaatctcagcctggcc 23291019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 117 - 252
Target Start/End: Original strand, 25986929 - 25987064
Alignment:
Q  117 ggagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaa 216  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||  ||| ||||||||||||||| |||||||||    
T  25986929 ggagcaatgctatatatcaagaaagattttattaagaaaatttcaagaatgacatggcaaaataatcactcttaaattttatcaagaaatagtcctgaaa 25987028  T
Q  217 ttaatgttagccaataaaatctcagcctggccggaa 252  Q
    ||||||||| ||||||||||||||| ||||||||||    
T  25987029 ttaatgttaaccaataaaatctcagtctggccggaa 25987064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 118 - 252
Target Start/End: Complemental strand, 2309488 - 2309354
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    |||||||| ||||||||||||||||||||||||| |   ||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  2309488 gagcaatgttatatatcaagaaagattttatcaaaatttttttaagaatggcatggcagaataatcacccttagattttatcaagaaattgtcctgaaat 2309389  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    ||||||||||||||||||||||||| |||||||||    
T  2309388 taatgttagccaataaaatctcagcttggccggaa 2309354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 118 - 252
Target Start/End: Complemental strand, 9752309 - 9752176
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    |||||||| |||||||||||||| | || |||||||||| ||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  9752309 gagcaatgttatatatcaagaaaaaatt-atcaagaaaaattcaagaatgatatggcagaataatcacccttagattttattaagaaattgtcctgaaat 9752211  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||||||||||||||||||||||||||||||    
T  9752210 taatgttagccaataaaatctcagcctggccggaa 9752176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 118 - 241
Target Start/End: Original strand, 6127275 - 6127399
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctg-aaa 216  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||| || |||    
T  6127275 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaaa 6127374  T
Q  217 ttaatgttagccaataaaatctcag 241  Q
    |||||||||||||||||||| ||||    
T  6127375 ttaatgttagccaataaaatatcag 6127399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 118 - 252
Target Start/End: Complemental strand, 6031806 - 6031672
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    |||||||||||||||||||||||||||| ||||| ||||||| |||||||||||| ||||||||||||| ||| ||||||||||||||| ||| ||||||    
T  6031806 gagcaatgctatatatcaagaaagatttcatcaataaaattttaagaatgacatgacagaataatcacccttaaattttatcaagaaatagtcttgaaat 6031707  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||| ||||||||||| ||||||||||||||    
T  6031706 taatgttaaccaataaaatcccagcctggccggaa 6031672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 121 - 245
Target Start/End: Complemental strand, 8515787 - 8515664
Alignment:
Q  121 caatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaattaa 220  Q
    ||||||||||||||||||||||||||||||||| |  || ||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||    
T  8515787 caatgctatatatcaagaaagattttatcaagacagatttaagaatgacatggcagaataatcacattt-gattttatcaagaaattgtcccgaaattaa 8515689  T
Q  221 tgttagccaataaaatctcagcctg 245  Q
    |||||||||||||||||||||||||    
T  8515688 tgttagccaataaaatctcagcctg 8515664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 124 - 252
Target Start/End: Complemental strand, 11548647 - 11548519
Alignment:
Q  124 tgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaattaatgt 223  Q
    ||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||||    
T  11548647 tgctatatatcaagaaaaattttctcaagaaaaattcaagaatgacatggcagaataatcacccttagattttatcaagaaattgtactgatattaatgt 11548548  T
Q  224 tagccaataaaatctcagcctggccggaa 252  Q
    |||||||||||||||| | | ||||||||    
T  11548547 tagccaataaaatctctgtcgggccggaa 11548519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 116 - 252
Target Start/End: Original strand, 32702205 - 32702339
Alignment:
Q  116 tggagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaa 215  Q
    |||||||||||||||  |||||||||||||| ||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||    
T  32702205 tggagcaatgctata--tcaagaaagattttttcatgaaaatttcaagaatgatatggcagaataatcacccttagattttatcaagaaatagtcctgaa 32702302  T
Q  216 attaatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||| ||| |||||||||||| || || |||||||    
T  32702303 attaatattaaccaataaaatctgagtctagccggaa 32702339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 118 - 197
Target Start/End: Complemental strand, 18889761 - 18889683
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagatttta 197  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  18889761 gagcaatgctatatatcaagaaagattt-atcaagaaaatttcaagaatgacatggcagaataataacccttagatttta 18889683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 29693712 - 29693639
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||||||||||  || |||||||||||||||||||||| ||| ||||||||    
T  29693712 aatgctagatatcaagaatgattttatcaagaaagatttaagaatgacatggcagaataatgacccttagattt 29693639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 17175820 - 17175892
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||  |||||||||||||||| | |||||||||||||||||||    
T  17175820 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggtacaataatcacctttagattt 17175892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 32702471 - 32702399
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||||||| || |||||| ||||||||||||    
T  32702471 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatgacacaataattacctttagattt 32702399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 33696963 - 33696891
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||  || ||||||||||||||| |||||||||||||||||||    
T  33696963 aatgctagatatcaagaatgattttat-aagaaagatttaagaatgacatggcacaataatcacctttagattt 33696891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 195
Target Start/End: Original strand, 6031547 - 6031611
Alignment:
Q  130 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    |||||||||| |||||||| || || |||| ||||||||||||||| |||||||||||||||||||    
T  6031547 atatcaagaatgattttataaaaaagattt-aagaatgacatggcacaataatcacctttagattt 6031611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 11548388 - 11548460
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| ||||| ||||||||   |||||||||||||||||| |||||||||| ||||||||    
T  11548388 aatgctagatatcaagaatgattt-atcaagaacgattcaagaatgacatggcacaataatcacccttagattt 11548460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 18365373 - 18365445
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||  | |||||||||||| ||| |||||||||||||||||||    
T  18365373 aatgctagatatcaagaatgattttat-aagaaagatccaagaatgacatagcacaataatcacctttagattt 18365445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 18370637 - 18370709
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||  | |||||||||||| ||| |||||||||||||||||||    
T  18370637 aatgctagatatcaagaatgattttat-aagaaagatccaagaatgacatagcacaataatcacctttagattt 18370709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 28675414 - 28675342
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||||||| || |||||||||| ||||||||    
T  28675414 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatgacacaataatcacccttagattt 28675342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 185
Target Start/End: Original strand, 34238886 - 34238948
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcac 185  Q
    ||||||| |||||||||| |||||||||||||| | ||||||||||||||| || |||||||||    
T  34238886 aatgctagatatcaagaatgattttatcaagaaga-ttcaagaatgacatgacacaataatcac 34238948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 130 - 195
Target Start/End: Original strand, 582534 - 582600
Alignment:
Q  130 atatcaagaaagattttatcaagaaaatttcaagaatgacatgg-cagaataatcacctttagattt 195  Q
    |||||||||| |||||||| ||||||| || |||||||| |||| ||||||||||||| ||||||||    
T  582534 atatcaagaatgattttattaagaaaaatttaagaatgatatgggcagaataatcaccattagattt 582600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 122 - 188
Target Start/End: Original strand, 17705268 - 17705333
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctt 188  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||||||| || ||||||||||||    
T  17705268 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatgacacaataatcacctt 17705333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 2309222 - 2309294
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||  | |||||||| ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  2309222 aatgctagatatcaacgatgattttat-aagaaagattcaagaatgacatggcacaataatcacccttagattt 2309294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 195
Target Start/End: Original strand, 18889478 - 18889515
Alignment:
Q  158 ttcaagaatgacatggcagaataatcacctttagattt 195  Q
    |||||||||||||||||| |||||||||||||||||||    
T  18889478 ttcaagaatgacatggcacaataatcacctttagattt 18889515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 23290880 - 23290952
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| ||||||| || |||||||| ||||||  ||||||||||| |||||| |||||| ||||||||||||    
T  23290880 aatgctagatatcaaaaatgattttat-aagaaagattcaagaatgatatggcacaataattacctttagattt 23290952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 33695125 - 33695197
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||  || |||||||| ||| || |||||||||||||||||||    
T  33695125 aatgctagatatcaagaatgattttat-aagaaatatttaagaatgatatgtcacaataatcacctttagattt 33695197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 181
Target Start/End: Complemental strand, 18889623 - 18889593
Alignment:
Q  151 agaaaatttcaagaatgacatggcagaataa 181  Q
    |||||||||||||||||||||||||||||||    
T  18889623 agaaaatttcaagaatgacatggcagaataa 18889593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 222 - 252
Target Start/End: Original strand, 29693542 - 29693572
Alignment:
Q  222 gttagccaataaaatctcagcctggccggaa 252  Q
    |||||||||||||||||||||||||||||||    
T  29693542 gttagccaataaaatctcagcctggccggaa 29693572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 127; Significance: 1e-65; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 118 - 252
Target Start/End: Complemental strand, 10442854 - 10442720
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  10442854 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaat 10442755  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||||||||||||||||||||||||||||||    
T  10442754 taatgttagccaataaaatctcagcctggccggaa 10442720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 118 - 252
Target Start/End: Complemental strand, 21802387 - 21802253
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  21802387 gagcaatgctatatatcaagaaatattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaattgtcctgaaat 21802288  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||||||||||||||||||| ||||||||||    
T  21802287 taatgttagccaataaaatctcagtctggccggaa 21802253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 118 - 252
Target Start/End: Complemental strand, 31078884 - 31078750
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  31078884 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaat 31078785  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||| ||||||||||||||||||||||||||    
T  31078784 taatgttaaccaataaaatctcagcctggccggaa 31078750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 119 - 252
Target Start/End: Complemental strand, 7745176 - 7745043
Alignment:
Q  119 agcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaatt 218  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  7745176 agcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaatt 7745077  T
Q  219 aatgttagccaataaaatctcagcctggccggaa 252  Q
    ||||||||||||||||||||||||||||||||||    
T  7745076 aatgttagccaataaaatctcagcctggccggaa 7745043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 118 - 252
Target Start/End: Original strand, 47290066 - 47290200
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  47290066 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaat 47290165  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||| ||||||||||||||||||||||||||    
T  47290166 taatgttaaccaataaaatctcagcctggccggaa 47290200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 118 - 252
Target Start/End: Complemental strand, 49387953 - 49387819
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  49387953 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaat 49387854  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||| |||||||||||||||||| |||||||    
T  49387853 taatgttaaccaataaaatctcagcctagccggaa 49387819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 118 - 252
Target Start/End: Original strand, 24128239 - 24128373
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||    
T  24128239 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcatccttagattttatcaagaaatagtcctgaaat 24128338  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||| ||||||||||||||||||||||||||    
T  24128339 taatgttaaccaataaaatctcagcctggccggaa 24128373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 118 - 252
Target Start/End: Original strand, 36072947 - 36073081
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||    
T  36072947 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataaccacccttagattttatcaagaaatagtcctgaaat 36073046  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||| ||||||||||||||| ||||||||||    
T  36073047 taatgttaaccaataaaatctcagtctggccggaa 36073081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 118 - 249
Target Start/End: Original strand, 44893426 - 44893557
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  44893426 gagcaatgctatatatcaagaaagattttttcaaaaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaat 44893525  T
Q  218 taatgttagccaataaaatctcagcctggccg 249  Q
    |||||||| |||||||||||||||||||||||    
T  44893526 taatgttaaccaataaaatctcagcctggccg 44893557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 118 - 248
Target Start/End: Original strand, 22199261 - 22199391
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||| |||||     
T  22199261 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcagccttagattttatcaagaaatagtcttgaaac 22199360  T
Q  218 taatgttagccaataaaatctcagcctggcc 248  Q
    |||||||||||||||||||||||||||||||    
T  22199361 taatgttagccaataaaatctcagcctggcc 22199391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 118 - 252
Target Start/End: Complemental strand, 33530753 - 33530619
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||     
T  33530753 gagcaatgctatatatcaagaaagattttatcaagaaaaattcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaac 33530654  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    ||||||||||||||||||| |||||||||||||||    
T  33530653 taatgttagccaataaaatttcagcctggccggaa 33530619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 118 - 252
Target Start/End: Original strand, 53123030 - 53123165
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaa-gaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaa 216  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  53123030 gagcaatgctatatatcaagaaagattttttcaaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaa 53123129  T
Q  217 ttaatgttagccaataaaatctcagcctggccggaa 252  Q
    ||||||||| ||||||||||||||| ||||||||||    
T  53123130 ttaatgttaaccaataaaatctcagtctggccggaa 53123165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 118 - 252
Target Start/End: Original strand, 4751446 - 4751580
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||    
T  4751446 gagcaatgctatatatcaagaaagattttatcaagaaaattccaagaatgacatggcagaataaccacccttagattttatcaagaaatagtcctgaaat 4751545  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||| ||||||||||||||| |||| |||||    
T  4751546 taatgttaaccaataaaatctcagtctggtcggaa 4751580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 118 - 252
Target Start/End: Original strand, 46441844 - 46441978
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  46441844 gagcaatgctatatatcaagaaagatttttttaagaaaatttcaagaatgacatggcaaaataatcacccttagattttatcaagaaatagtcctgaaat 46441943  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||| |||||||||||||| |||||||||||    
T  46441944 taatgttaaccaataaaatctcaacctggccggaa 46441978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 118 - 252
Target Start/End: Original strand, 2624837 - 2624971
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||  || ||||||    
T  2624837 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgaaatggcagaataatcacccttagattttatcaagaaataatcatgaaat 2624936  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    ||||||||  |||||||||||||| ||||||||||    
T  2624937 taatgttaatcaataaaatctcagtctggccggaa 2624971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 118 - 252
Target Start/End: Complemental strand, 23964530 - 23964396
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    |||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||    
T  23964530 gagcaatgttatatatcaagaaagattttatcaaaaaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaat 23964431  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    ||||||||| |||||||||||||||||| ||||||    
T  23964430 taatgttagtcaataaaatctcagcctgaccggaa 23964396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 118 - 252
Target Start/End: Complemental strand, 50156643 - 50156509
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    |||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||| | ||||    
T  50156643 gagcaatgctatatattaagaaagattttttcaagaaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcataaaat 50156544  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||| ||||||||||||||||||||||||||    
T  50156543 taatgttaaccaataaaatctcagcctggccggaa 50156509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 113 - 249
Target Start/End: Complemental strand, 44893284 - 44893147
Alignment:
Q  113 aaatggagcaatgctatatatcaagaaagattttatcaagaaaa-tttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcc 211  Q
    |||| |||||||||||||||| |||||||||||| |||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  44893284 aaatagagcaatgctatatattaagaaagattttttcaaaaaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcc 44893185  T
Q  212 tgaaattaatgttagccaataaaatctcagcctggccg 249  Q
    |||||||||||||| |||||||||||||||||||||||    
T  44893184 tgaaattaatgttaaccaataaaatctcagcctggccg 44893147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 118 - 252
Target Start/End: Original strand, 24392667 - 24392801
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||    
T  24392667 gagcaatgctatatatcaagaaagattttctcaagaaaaattcaagaatgacatggcagaataatcacccttaaattttatcaagaaattgtactgaaat 24392766  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    ||||||||| |||||||||||| | | ||||||||    
T  24392767 taatgttagtcaataaaatctctgtcgggccggaa 24392801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 122 - 252
Target Start/End: Original strand, 36073354 - 36073484
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaattaat 221  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||  || ||||||||||    
T  36073354 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttaaattttatcaagaaatattcatgaaattaat 36073453  T
Q  222 gttagccaataaaatctcagcctggccggaa 252  Q
    |||| ||||||||||||||||||| ||||||    
T  36073454 gttaaccaataaaatctcagcctgaccggaa 36073484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 146 - 252
Target Start/End: Original strand, 9088898 - 9089004
Alignment:
Q  146 tatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaattaatgttagccaataaaatctcagcctg 245  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  9088898 tatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctg 9088997  T
Q  246 gccggaa 252  Q
    |||||||    
T  9088998 gccggaa 9089004  T

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Target: chr4; HSP #22
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 150 - 252
Target Start/End: Original strand, 17655462 - 17655564
Alignment:
Q  150 aagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaattaatgttagccaataaaatctcagcctggccg 249  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  17655462 aagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttagccaataaaatctcagcctggccg 17655561  T
Q  250 gaa 252  Q
    |||    
T  17655562 gaa 17655564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 118 - 252
Target Start/End: Complemental strand, 37935006 - 37934872
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||| |||||| ||||| |||||||||||||||||||| |||||||||    
T  37935006 gagcaatgctatatatcaaaaaagattttatcaaaaaaatgtcaagaatgacatggtagaatactcacccttagattttatcaagaaattatcctgaaat 37934907  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||| ||||||||||||||| |||| |||||    
T  37934906 taatgttaaccaataaaatctcagtctggtcggaa 37934872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 124 - 240
Target Start/End: Original strand, 42671675 - 42671791
Alignment:
Q  124 tgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaattaatgt 223  Q
    ||||||||||||| |||||||||||||| |||| || |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  42671675 tgctatatatcaataaagattttatcaaaaaaaatttaagaatgacatggcagaataatcacccttagattttatcaagaaattgtcctaaaattaatgt 42671774  T
Q  224 tagccaataaaatctca 240  Q
    || ||||||||||||||    
T  42671775 taaccaataaaatctca 42671791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 131 - 252
Target Start/End: Complemental strand, 36073795 - 36073674
Alignment:
Q  131 tatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaattaatgttagccaa 230  Q
    |||||||||||||||||| ||||||  || |||||||||||| || ||||||||| |||||||||||| ||||||||||||| |||||||| ||||||||    
T  36073795 tatcaagaaagattttatgaagaaagatttaagaatgacatgacaaaataatcacttttagattttatgaagaaattgtcctaaaattaatattagccaa 36073696  T
Q  231 taaaatctcagcctggccggaa 252  Q
    |||||||||||  |||||||||    
T  36073695 taaaatctcagtttggccggaa 36073674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 146 - 252
Target Start/End: Original strand, 30563237 - 30563343
Alignment:
Q  146 tatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaattaatgttagccaataaaatctcagcctg 245  Q
    ||||||||||  ||||| ||||||| ||||||||| ||| |||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||    
T  30563237 tatcaagaaagattcaacaatgacacggcagaatagtcatctttagattttatcaagaaattatcctgcaattaatgttggccaataaaatctcagcctg 30563336  T
Q  246 gccggaa 252  Q
    |||||||    
T  30563337 gccggaa 30563343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 164 - 252
Target Start/End: Original strand, 37219671 - 37219759
Alignment:
Q  164 aatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaattaatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||||| | |||||||||  ||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  37219671 aatgacatggtaaaataatcactcttaaattttatcaagaaattgtcctgaaattaatgttagtcaataaaatctcagtctggccggaa 37219759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 135 - 252
Target Start/End: Original strand, 44744452 - 44744568
Alignment:
Q  135 aagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaattaatgttagccaataaa 234  Q
    |||||||||||||| ||||||  || || |||||||||| |||||||||||| ||| |||||||||| |||||||||||||||| ||||||| | |||||    
T  44744452 aagaaagattttattaagaaatatttaaaaatgacatggtagaataatcacccttaaattttatcaaaaaattgtcctgaaattgatgttagtcgataaa 44744551  T
Q  235 atctcagcctggccggaa 252  Q
    || |||| ||||||||||    
T  44744552 at-tcagtctggccggaa 44744568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 162 - 233
Target Start/End: Complemental strand, 11314255 - 11314184
Alignment:
Q  162 agaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaattaatgttagccaataa 233  Q
    ||||||||||| ||||||||||| | ||||||| |||||||||||||| |||||||||||||||||||||||    
T  11314255 agaatgacatgacagaataatcatccttagattatatcaagaaattgttctgaaattaatgttagccaataa 11314184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 36073615 - 36073543
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||||||||||||    
T  36073615 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 36073543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 46442110 - 46442038
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||||||||||||    
T  46442110 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 46442038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 9089136 - 9089064
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||| ||||||||||    
T  9089136 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcatctttagattt 9089064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 10442586 - 10442658
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||  |||||||||||||||||| |||||||||||||||||||    
T  10442586 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 10442658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 44893012 - 44893084
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||||||||||||    
T  44893012 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacctttagattt 44893084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 44893692 - 44893620
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||||||||||||    
T  44893692 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacctttagattt 44893620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 47290332 - 47290260
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||| | |||||||||||||||||||    
T  47290332 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggtacaataatcacctttagattt 47290260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 53123297 - 53123225
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||| ||||||||||    
T  53123297 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcatctttagattt 53123225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 185
Target Start/End: Original strand, 25063373 - 25063436
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcac 185  Q
    ||||||| |||||||||| |||||||||||||||  |||||||||||||||| |||||||||||    
T  25063373 aatgctagatatcaagaatgattttatcaagaaagattcaagaatgacatggtagaataatcac 25063436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 22199525 - 22199453
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||  | |||||||||||||||| |||||||||||||||||||    
T  22199525 aatgctagatatcaagaatgattttat-aagaaagatccaagaatgacatggcacaataatcacctttagattt 22199453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 31078618 - 31078690
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| || |||||| |||||||||||||||| |||||||| ||||||||||    
T  31078618 aatgctagatatcaagaatgattttataaaaaaaatt-caagaatgacatggcacaataatcatctttagattt 31078690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 36073217 - 36073145
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| ||||||| || |||||||| ||||||| |||||||||||||||||| ||||| |||||||||||||    
T  36073217 aatgctagatatcaaaaatgattttat-aagaaaaattcaagaatgacatggcacaataaccacctttagattt 36073145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 37219890 - 37219825
Alignment:
Q  130 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    |||||||||| |||||||||||||||  || |||||||||||||||||||||||| | ||||||||    
T  37219890 atatcaagaatgattttatcaagaaagatttaagaatgacatggcagaataatcatccttagattt 37219825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 130 - 195
Target Start/End: Original strand, 49387694 - 49387758
Alignment:
Q  130 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    |||||||| | |||||||| ||||||| |||||||||||||||||| |||||||||||||||||||    
T  49387694 atatcaaggatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 49387758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 122 - 194
Target Start/End: Original strand, 11314050 - 11314122
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagatt 194  Q
    ||||||| |||||||||| |||||||||||||||  | ||||||||||||| || |||||||||| |||||||    
T  11314050 aatgctagatatcaagaatgattttatcaagaaagatgcaagaatgacatgacacaataatcacccttagatt 11314122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 4751713 - 4751641
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| ||||||||||  ||||||| ||||||| || ||||||||||||||| ||||| |||||||||||||    
T  4751713 aatgctagatatcaagaataattttat-aagaaaaatttaagaatgacatggcacaataaccacctttagattt 4751641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 195
Target Start/End: Original strand, 7744919 - 7744983
Alignment:
Q  130 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    |||||||||| |||||||| ||||||  |||||||||||||| ||| |||||||||||||||||||    
T  7744919 atatcaagaatgattttat-aagaaagattcaagaatgacattgcacaataatcacctttagattt 7744983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 17655697 - 17655624
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||| ||||| |||||||||||||||  || |||||||||||| || |||||| ||||||||||||    
T  17655697 aatgctagatattaagaatgattttatcaagaaagatttaagaatgacatgacataataattacctttagattt 17655624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 21802119 - 21802191
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||||||| || |||||||||| ||||||||    
T  21802119 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatgacacaataatcacccttagattt 21802191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 24128505 - 24128433
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||| || |||||||||||| || |||||| ||||||||||||    
T  24128505 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatgacacaataattacctttagattt 24128433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 33530483 - 33530555
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| || || ||  |||||||||||||||| |||||||||||||||||||    
T  33530483 aatgctagatatcaagaatgattttataaaaaagatc-caagaatgacatggcacaataatcacctttagattt 33530555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 130 - 184
Target Start/End: Complemental strand, 42671927 - 42671873
Alignment:
Q  130 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatca 184  Q
    |||||||||| |||||||||||||||  ||||||||||||||| || ||||||||    
T  42671927 atatcaagaatgattttatcaagaaagattcaagaatgacatgacataataatca 42671873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 130 - 188
Target Start/End: Original strand, 50156386 - 50156443
Alignment:
Q  130 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctt 188  Q
    |||||||||| |||||||| ||||||| ||||||||||||||| || ||||||||||||    
T  50156386 atatcaagaatgattttat-aagaaaaattcaagaatgacatgacataataatcacctt 50156443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 2625095 - 2625031
Alignment:
Q  130 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    |||||||||| |||||||| ||||||  ||||| |||||||| ||| |||||||||||||||||||    
T  2625095 atatcaagaatgattttat-aagaaagattcaaaaatgacatagcacaataatcacctttagattt 2625031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 195
Target Start/End: Original strand, 23964271 - 23964335
Alignment:
Q  130 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    |||||||||| |||||||| ||||||  || ||||||||||||||| |||||||| ||||||||||    
T  23964271 atatcaagaatgattttat-aagaaagatttaagaatgacatggcataataatcatctttagattt 23964335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 9111337 - 9111396
Alignment:
Q  190 agattttatcaagaaattgtcctgaaattaatgttagccaataaaatctcagcctggccg 249  Q
    |||||||||||||||||||||  |||||||| |||| |||||||||| ||  ||||||||    
T  9111337 agattttatcaagaaattgtctcgaaattaaagttaaccaataaaatttctacctggccg 9111396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 24392940 - 24392868
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| ||||| |||||||||  || ||||||||||| ||| |||||||| | ||||||||    
T  24392940 aatgctagatatcaagaatgattt-atcaagaaatatttaagaatgacatagcacaataatcatccttagattt 24392868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 127; Significance: 1e-65; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 118 - 252
Target Start/End: Complemental strand, 9293641 - 9293507
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  9293641 gagcaatgctatatatcaagaaagattttatcaagaaattttcaagaatgacatggcagaataatcacccttagattttatcaagaaattgtcctgaaat 9293542  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||||||||||||||||||||||||||||||    
T  9293541 taatgttagccaataaaatctcagcctggccggaa 9293507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 118 - 252
Target Start/End: Original strand, 35160757 - 35160891
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  35160757 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaat 35160856  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||| ||||||||||||||||||||||||||    
T  35160857 taatgttaaccaataaaatctcagcctggccggaa 35160891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 119 - 252
Target Start/End: Original strand, 10661888 - 10662021
Alignment:
Q  119 agcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaatt 218  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  10661888 agcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaatt 10661987  T
Q  219 aatgttagccaataaaatctcagcctggccggaa 252  Q
    ||||||| ||||||||||||||||||||||||||    
T  10661988 aatgttaaccaataaaatctcagcctggccggaa 10662021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 118 - 252
Target Start/End: Complemental strand, 23268127 - 23267993
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  23268127 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaat 23268028  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||| ||||||||||||||| ||||||||||    
T  23268027 taatgttaaccaataaaatctcagtctggccggaa 23267993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 118 - 252
Target Start/End: Original strand, 21936081 - 21936216
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||| ||||||    
T  21936081 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatcacccttagattttatcaagaaatagtcttgaaat 21936180  T
Q  218 taatgttagccaataaaatctc-agcctggccggaa 252  Q
    |||||||||||||||||||||| |||||||||||||    
T  21936181 taatgttagccaataaaatctctagcctggccggaa 21936216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 117 - 252
Target Start/End: Original strand, 33380206 - 33380341
Alignment:
Q  117 ggagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaa 216  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||    
T  33380206 ggagcaatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggctgaataatcacccttagattttatcaagaaatagtcctgaaa 33380305  T
Q  217 ttaatgttagccaataaaatctcagcctggccggaa 252  Q
    ||||||||| ||||||||||||||||||||||||||    
T  33380306 ttaatgttaaccaataaaatctcagcctggccggaa 33380341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 118 - 252
Target Start/End: Complemental strand, 7475573 - 7475439
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||| ||||||||||    
T  7475573 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatgatagaataatcacccttagattttatcaagaaatagtcctgaaat 7475474  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||| ||||||||||||||||||||||||||    
T  7475473 taatgttaaccaataaaatctcagcctggccggaa 7475439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 112 - 248
Target Start/End: Complemental strand, 14941437 - 14941302
Alignment:
Q  112 aaaatggagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcc 211  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  14941437 aaaatagagcaatgctatatatcaagaaagattttattaagaaagattcaagaatgacatggcagaataatcacccttagattttatcaagaaattgtcc 14941338  T
Q  212 tgaaattaatgttagccaataaaatctcagcctggcc 248  Q
    |||||||||||||||||||| ||||||||||||||||    
T  14941337 tgaaattaatgttagccaat-aaatctcagcctggcc 14941302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 121 - 252
Target Start/End: Complemental strand, 31174896 - 31174765
Alignment:
Q  121 caatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaattaa 220  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  31174896 caatgttatatatcaagaaagattttattaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaa 31174797  T
Q  221 tgttagccaataaaatctcagcctggccggaa 252  Q
    ||||||||||||||||||||| ||| ||||||    
T  31174796 tgttagccaataaaatctcagtctgaccggaa 31174765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 118 - 252
Target Start/End: Original strand, 13354846 - 13354981
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||| ||| ||||||    
T  13354846 gagcaatgttatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataattacccttagattttatcaagaaatagtcttgaaat 13354945  T
Q  218 taatgttagccaataaaatctc-agcctggccggaa 252  Q
    |||||||||||||||||||||| |||||||||||||    
T  13354946 taatgttagccaataaaatctctagcctggccggaa 13354981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 118 - 236
Target Start/End: Original strand, 43330912 - 43331030
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  43330912 gagcaatgctatatatcaagaaagattttctcaaaaaaaattcaagaatgacatggcagaataatcacccttagattttatcaagaaattgtactgaaat 43331011  T
Q  218 taatgttagccaataaaat 236  Q
    |||||||||||||||||||    
T  43331012 taatgttagccaataaaat 43331030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 118 - 245
Target Start/End: Original strand, 27847632 - 27847759
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    |||||||||| ||||| |||||||||||||| ||||||  ||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||    
T  27847632 gagcaatgctgtatataaagaaagattttattaagaaagattcaagaatgacatgacagaataatcaccgttagattttatcaaaaaattgtcctgaaat 27847731  T
Q  218 taatgttagccaataaaatctcagcctg 245  Q
    ||||||||| ||||||||||||||||||    
T  27847732 taatgttagtcaataaaatctcagcctg 27847759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 116 - 244
Target Start/End: Original strand, 9723403 - 9723531
Alignment:
Q  116 tggagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaa 215  Q
    |||||||||||||||||| |||||||||||||| ||||||  || |||||||||||| ||||||||||||| ||| |||||||||||||||||||| |||    
T  9723403 tggagcaatgctatatattaagaaagattttattaagaaagatttaagaatgacatgacagaataatcacccttaaattttatcaagaaattgtcccgaa 9723502  T
Q  216 attaatgttagccaataaaatctcagcct 244  Q
    |||||||||||| ||||||||||||||||    
T  9723503 attaatgttagctaataaaatctcagcct 9723531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 146 - 252
Target Start/End: Original strand, 3989104 - 3989210
Alignment:
Q  146 tatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaattaatgttagccaataaaatctcagcctg 245  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||    
T  3989104 tatcaagaaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaattaatgttagccaataaaatctcagtctg 3989203  T
Q  246 gccggaa 252  Q
    |||||||    
T  3989204 gccggaa 3989210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 120 - 238
Target Start/End: Complemental strand, 21393751 - 21393633
Alignment:
Q  120 gcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaatta 219  Q
    ||||||||||||||||||||| ||||| ||||||||| || ||||||||||||| |||||||||||| |||||||||||||||||||||| |||||||||    
T  21393751 gcaatgctatatatcaagaaaaattttctcaagaaaaatttaagaatgacatggtagaataatcacccttagattttatcaagaaattgtactgaaatta 21393652  T
Q  220 atgttagccaataaaatct 238  Q
    |||||| ||||||||||||    
T  21393651 atgttaaccaataaaatct 21393633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 130 - 244
Target Start/End: Original strand, 22591494 - 22591608
Alignment:
Q  130 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaattaatgttagcca 229  Q
    ||||||||||||||||||| || |||| ||||||||||| |||||||||||||| || ||| ||||||| ||||||||||||||||||||||||||||||    
T  22591494 atatcaagaaagattttattaaaaaaaattcaagaatgatatggcagaataatcccccttaaattttattaagaaattgtcctgaaattaatgttagcca 22591593  T
Q  230 ataaaatctcagcct 244  Q
    |||||||||||||||    
T  22591594 ataaaatctcagcct 22591608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 128 - 252
Target Start/End: Complemental strand, 16767527 - 16767403
Alignment:
Q  128 atatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaattaatgttagc 227  Q
    ||||||||||| ||||||||| || ||||  | |||||| | | || |||||||||||  ||| |||||||||||||||| |||||||||||||||||||    
T  16767527 atatatcaagagagattttataaaaaaaaaattaagaataatacggtagaataatcactcttaaattttatcaagaaattatcctgaaattaatgttagc 16767428  T
Q  228 caataaaatctcagcctggccggaa 252  Q
    |||||||||||||| ||||||||||    
T  16767427 caataaaatctcagtctggccggaa 16767403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 158 - 234
Target Start/End: Original strand, 37335753 - 37335829
Alignment:
Q  158 ttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaattaatgttagccaataaa 234  Q
    |||||||||||||||||||||||||||| |||||||| |||||| ||||||| |||| |||||||||||||||||||    
T  37335753 ttcaagaatgacatggcagaataatcacttttagattgtatcaaaaaattgttctgatattaatgttagccaataaa 37335829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 33380473 - 33380401
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||||||||||||    
T  33380473 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 33380401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 35161025 - 35160953
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||||||||||||    
T  35161025 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 35160953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 122 - 196
Target Start/End: Complemental strand, 22592979 - 22592905
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagatttt 196  Q
    ||||||| |||||||||| |||||||||||||||  ||||||||||||||| || |||||||||| |||||||||    
T  22592979 aatgctagatatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatcacccttagatttt 22592905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 190 - 252
Target Start/End: Complemental strand, 40262729 - 40262667
Alignment:
Q  190 agattttatcaagaaattgtcctgaaattaatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||||||| |||| ||||||    
T  40262729 agattttatcaagaaattgtcccgaaattaatattagccaataaaatctcaccctgaccggaa 40262667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 10662154 - 10662082
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||||||| || |||||||||||||||||||    
T  10662154 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatgacacaataatcacctttagattt 10662082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 23267861 - 23267933
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||||||||||||    
T  23267861 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacctttagattt 23267933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 7475307 - 7475379
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||| ||| || |||||||||||||||||||    
T  7475307 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgatatgacataataatcacctttagattt 7475379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 9723665 - 9723600
Alignment:
Q  130 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    |||||||||| ||||| |||||||||  || |||||||||||| ||||||||||||||||||||||    
T  9723665 atatcaagaatgatttgatcaagaaatatttaagaatgacatgacagaataatcacctttagattt 9723600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 43331178 - 43331106
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| ||||| |||||||||  |||||||||||||||| | |||||||||||||||||||    
T  43331178 aatgctagatatcaagaatgattt-atcaagaaagattcaagaatgacatggtacaataatcacctttagattt 43331106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 9293374 - 9293446
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||||||| || |||||||||| ||||||||    
T  9293374 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatgacacaataatcacccttagattt 9293446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 13355114 - 13355042
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||  | |||||||||||||||| ||||||||| |||||||||    
T  13355114 aatgctagatatcaagaatgattttat-aagaaagatccaagaatgacatggcacaataatcacttttagattt 13355042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 3989342 - 3989270
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||  | ||||||||||||| || |||||| ||||||||||||    
T  3989342 aatgctagatatcaagaatgattttat-aagaaagatccaagaatgacatgacacaataataacctttagattt 3989270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 21393485 - 21393556
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| ||||| |||||||||||| ||||||||||||| || |||||||||| ||| ||||    
T  21393485 aatgctagatatcaagaatgattt-atcaagaaaatt-caagaatgacatgacacaataatcacccttaaattt 21393556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 31174634 - 31174706
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||||||| || ||||| | |||||||||||    
T  31174634 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatgacacaataaactcctttagattt 31174706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 195
Target Start/End: Complemental strand, 21936311 - 21936276
Alignment:
Q  160 caagaatgacatggcagaataatcacctttagattt 195  Q
    |||||||||||||||| |||||||||||||||||||    
T  21936311 caagaatgacatggcacaataatcacctttagattt 21936276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Original strand, 34320990 - 34321028
Alignment:
Q  157 tttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||||||||||||||| |||||||||| ||||||||    
T  34320990 tttcaagaatgacatggcacaataatcacccttagattt 34321028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 155
Target Start/End: Complemental strand, 40262748 - 40262714
Alignment:
Q  121 caatgctatatatcaagaaagattttatcaagaaa 155  Q
    ||||| |||||||||||||||||||||||||||||    
T  40262748 caatgttatatatcaagaaagattttatcaagaaa 40262714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 124; Significance: 7e-64; HSPs: 66)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 118 - 249
Target Start/End: Original strand, 34665382 - 34665513
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  34665382 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaattgtcctgaaat 34665481  T
Q  218 taatgttagccaataaaatctcagcctggccg 249  Q
    ||||||||||||||||||||||||| ||||||    
T  34665482 taatgttagccaataaaatctcagcttggccg 34665513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 118 - 252
Target Start/End: Complemental strand, 17841915 - 17841781
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  17841915 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaat 17841816  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||| ||||||||||||||||||||||||||    
T  17841815 taatgttaaccaataaaatctcagcctggccggaa 17841781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 118 - 252
Target Start/End: Complemental strand, 20091866 - 20091732
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  20091866 gagcaatgctatatatcaagaaatattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatcgtcctgaaat 20091767  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    ||||||||||||||||||||||||||| |||||||    
T  20091766 taatgttagccaataaaatctcagcctagccggaa 20091732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 118 - 252
Target Start/End: Complemental strand, 40780194 - 40780060
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  40780194 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaat 40780095  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||| ||||||||||||||||||||||||||    
T  40780094 taatgttaaccaataaaatctcagcctggccggaa 40780060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 118 - 252
Target Start/End: Original strand, 32064745 - 32064879
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  | |||||||    
T  32064745 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataattctgaaat 32064844  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||| ||||||||||||||||||||||||||    
T  32064845 taatgttaaccaataaaatctcagcctggccggaa 32064879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 118 - 249
Target Start/End: Complemental strand, 42755107 - 42754976
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||    
T  42755107 gagcaatgatatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcatgaaat 42755008  T
Q  218 taatgttagccaataaaatctcagcctggccg 249  Q
    |||||||| |||||||||||||||||||||||    
T  42755007 taatgttaaccaataaaatctcagcctggccg 42754976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 118 - 252
Target Start/End: Complemental strand, 24211618 - 24211484
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||| ||| ||||||    
T  24211618 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatggcatggcagaataatcacccttaaattttatcaagaaatagtcttgaaat 24211519  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||| ||||||||||||||||||||||||||    
T  24211518 taatgttaaccaataaaatctcagcctggccggaa 24211484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 111 - 252
Target Start/End: Complemental strand, 41819850 - 41819709
Alignment:
Q  111 taaaatggagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtc 210  Q
    |||||| |||||||| ||||||||||||||||||||||||||||  ||| |||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  41819850 taaaatagagcaatgttatatatcaagaaagattttatcaagaatgttttaagaatgatatggcagaataatcacccttagattttatcaagaaattgtc 41819751  T
Q  211 ctgaaattaatgttagccaataaaatctcagcctggccggaa 252  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  41819750 ctgaaattaatgttagccaataaaatctcagcccggccggaa 41819709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 118 - 252
Target Start/End: Original strand, 15187560 - 15187695
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||| ||| ||||||    
T  15187560 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataattacccttagattttatcaagaaatagtcttgaaat 15187659  T
Q  218 taatgttagccaataaaatctc-agcctggccggaa 252  Q
    |||||||||||||||||||||| |||||||||||||    
T  15187660 taatgttagccaataaaatctctagcctggccggaa 15187695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 118 - 252
Target Start/End: Complemental strand, 1646030 - 1645896
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||| ||| ||||||    
T  1646030 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaaagacatggcagaataatcacccttagattttatcaagaaatagtcttgaaat 1645931  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||||| |||||||||||||||||| |||||    
T  1645930 taatgttagctaataaaatctcagcctggtcggaa 1645896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 118 - 252
Target Start/End: Complemental strand, 6108298 - 6108164
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    |||||||| |||||||||||||||||||| | |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  6108298 gagcaatgttatatatcaagaaagatttttttaagaaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaat 6108199  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||| ||||||||||||||||||||||||||    
T  6108198 taatgttaaccaataaaatctcagcctggccggaa 6108164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 118 - 252
Target Start/End: Original strand, 35353041 - 35353175
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||  || ||||||    
T  35353041 gagcaatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaataatcatgaaat 35353140  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||| ||||||||||||||||||||||||||    
T  35353141 taatgttaaccaataaaatctcagcctggccggaa 35353175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 122 - 252
Target Start/End: Complemental strand, 37986116 - 37985986
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaattaat 221  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  37986116 aatgctatatatcaagaaagattttatcaaaaaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaat 37986017  T
Q  222 gttagccaataaaatctcagcctggccggaa 252  Q
    | |||||||||||||||||| ||||||||||    
T  37986016 gctagccaataaaatctcagtctggccggaa 37985986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 31347847 - 31347726
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  31347847 gagcaatgctatatatcaagaaatattttctcaagaaaaattcaagaatgacatggcagaataatcacccttagattttatcaagaaattgtcctgaaat 31347748  T
Q  218 taatgttagccaataaaatctc 239  Q
    ||||||||||||||||||||||    
T  31347747 taatgttagccaataaaatctc 31347726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 119 - 243
Target Start/End: Original strand, 14128865 - 14128989
Alignment:
Q  119 agcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaatt 218  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||    
T  14128865 agcaatgctatatatcaagaaagattttatcaataaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaatt 14128964  T
Q  219 aatgttagccaataaaatctcagcc 243  Q
    |||||||||||||||||||||||||    
T  14128965 aatgttagccaataaaatctcagcc 14128989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 118 - 241
Target Start/End: Original strand, 32393858 - 32393981
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||| ||| ||||||    
T  32393858 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttaaattttatcaagaaatagtcttgaaat 32393957  T
Q  218 taatgttagccaataaaatctcag 241  Q
    ||||||||||||||||||||||||    
T  32393958 taatgttagccaataaaatctcag 32393981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 123 - 252
Target Start/End: Complemental strand, 25581299 - 25581170
Alignment:
Q  123 atgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaattaatg 222  Q
    ||||||||||||||||||| |||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  25581299 atgctatatatcaagaaagtttttacgaagaaaatttcaagaatgacatggcaaaataatcacctttagattttatcaagaaatagtcctgaaattaatg 25581200  T
Q  223 ttagccaataaaatctcagcctggccggaa 252  Q
    ||| ||||||||||||||||||| ||||||    
T  25581199 ttaaccaataaaatctcagcctgaccggaa 25581170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 119 - 252
Target Start/End: Complemental strand, 27782181 - 27782048
Alignment:
Q  119 agcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaatt 218  Q
    |||||||||||||||||||||| ||||||||||||||  ||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  27782181 agcaatgctatatatcaagaaatattttatcaagaaagattcaataatgacatggcagaataatcacccttagattttatcaagaaattgtcttgaaatt 27782082  T
Q  219 aatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||||||||||||||| || ||||||||||    
T  27782081 aatgttagccaataaaatcttagtctggccggaa 27782048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 121 - 252
Target Start/End: Original strand, 8453837 - 8453968
Alignment:
Q  121 caatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaattaa 220  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||| ||||||||||||||||||| |||||||||||||    
T  8453837 caatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatgacaaaataatcacccttagattttatcaagaaatagtcctgaaattaa 8453936  T
Q  221 tgttagccaataaaatctcagcctggccggaa 252  Q
    ||| |  |||||||||||||||||||||||||    
T  8453937 tgtaacacaataaaatctcagcctggccggaa 8453968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 118 - 252
Target Start/End: Complemental strand, 26042181 - 26042044
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttaga---ttttatcaagaaattgtcctga 214  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||   |||||||||||||| |||||||    
T  26042181 gagcaatgctatatattaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatcacccttagatttttttatcaagaaatagtcctga 26042082  T
Q  215 aattaatgttagccaataaaatctcagcctggccggaa 252  Q
    ||||||||||| ||||||||||||||||||| ||||||    
T  26042081 aattaatgttaaccaataaaatctcagcctgaccggaa 26042044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 118 - 243
Target Start/End: Complemental strand, 39772866 - 39772741
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    |||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| |||| ||| ||||||    
T  39772866 gagcaatgttatatatcaagaaatattttatcaaaaaaatttcaagaatgacatggcagaataatcacccttagattttatcaaaaaatagtcttgaaat 39772767  T
Q  218 taatgttagccaataaaatctcagcc 243  Q
    ||||||||||||||||||||||||||    
T  39772766 taatgttagccaataaaatctcagcc 39772741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 117 - 241
Target Start/End: Complemental strand, 30835112 - 30834989
Alignment:
Q  117 ggagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaa 216  Q
    ||||||||| ||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  30835112 ggagcaatgttatatatcaagaaagattttatcgaaaaaatt-caagaatgacatggcagaataatcaccctttgattttatcaagaaattgtcctgaaa 30835014  T
Q  217 ttaatgttagccaataaaatctcag 241  Q
    |||||||||| ||||||||||||||    
T  30835013 ttaatgttagtcaataaaatctcag 30834989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 118 - 252
Target Start/End: Complemental strand, 7017930 - 7017796
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    |||||||||||||||||| |||||||||| | ||||||| ||||||||||||||||||||||||||| | |||||||||||||||||||||| || ||||    
T  7017930 gagcaatgctatatatcatgaaagattttcttaagaaaaattcaagaatgacatggcagaataatcatccttagattttatcaagaaattgtactaaaat 7017831  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||||||||||||||||| | | ||||||||    
T  7017830 taatgttagccaataaaatctctgtcgggccggaa 7017796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 128 - 238
Target Start/End: Original strand, 7021988 - 7022098
Alignment:
Q  128 atatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaattaatgttagc 227  Q
    ||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||| | |||||||||||||||    
T  7021988 atatatcaagaaagattttctcaagaaaaattcaagaatgatatggcagaataatcacccttagattttatcaagaaattgtaccgaaattaatgttagc 7022087  T
Q  228 caataaaatct 238  Q
    |||||||||||    
T  7022088 caataaaatct 7022098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 122 - 245
Target Start/End: Complemental strand, 24844919 - 24844797
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaattaat 221  Q
    ||||||| ||||||||||| ||||||| ||||||| ||||||||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||    
T  24844919 aatgctacatatcaagaaatattttattaagaaaaattcaagaatgacatgaca-aataatcacccttagattttatcaagaaattgtcccgaaattaat 24844821  T
Q  222 gttagccaataaaatctcagcctg 245  Q
    ||||||||||||||||||| ||||    
T  24844820 gttagccaataaaatctcatcctg 24844797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 146 - 252
Target Start/End: Complemental strand, 3597078 - 3596972
Alignment:
Q  146 tatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaattaatgttagccaataaaatctcagcctg 245  Q
    |||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  3597078 tatcaagaaagtttcaagaatgacatggcagaataattacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctg 3596979  T
Q  246 gccggaa 252  Q
     ||||||    
T  3596978 accggaa 3596972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 118 - 244
Target Start/End: Complemental strand, 27835518 - 27835392
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||| |||||| |||| ||||||| |||||||||||||||| | |||||||| | ||||||||||| || |||||||| | ||||    
T  27835518 gagcaatgctatatatcaataaagatcttattaagaaaaattcaagaatgacatggtaaaataatcatccttagattttattaaaaaattgtcttcaaat 27835419  T
Q  218 taatgttagccaataaaatctcagcct 244  Q
    |||||||||||||||||||||||||||    
T  27835418 taatgttagccaataaaatctcagcct 27835392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 146 - 240
Target Start/End: Complemental strand, 3890653 - 3890560
Alignment:
Q  146 tatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaattaatgttagccaataaaatctca 240  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  3890653 tatcaagaaaaattcaagaatgacatggcagaataatcacctt-agattttatcaagaaattgtctcgaaattaatgttagccaataaaatctca 3890560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 146 - 246
Target Start/End: Complemental strand, 15972914 - 15972814
Alignment:
Q  146 tatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaattaatgttagccaataaaatctcagcctg 245  Q
    ||||||||||  || |||||||||||| ||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||    
T  15972914 tatcaagaaagattgaagaatgacatgacagaataatcacccttagattttatcaagaaattgttctgaatttaatgttagccaataaaatctaagcctg 15972815  T
Q  246 g 246  Q
    |    
T  15972814 g 15972814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 126 - 186
Target Start/End: Original strand, 38016979 - 38017039
Alignment:
Q  126 ctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacc 186  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38016979 ctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacc 38017039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 122 - 197
Target Start/End: Original strand, 3890413 - 3890488
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagatttta 197  Q
    ||||||| |||||||||| |||||||||||||||  ||||||||||| ||||||||||||||||| ||||||||||    
T  3890413 aatgctagatatcaagaatgattttatcaagaaagattcaagaatgatatggcagaataatcaccattagatttta 3890488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 118 - 184
Target Start/End: Complemental strand, 37132723 - 37132657
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatca 184  Q
    ||||||||||||||||||| ||| ||||||||||||||| || ||||||||||||||||||||||||    
T  37132723 gagcaatgctatatatcaaaaaatattttatcaagaaaaatttaagaatgacatggcagaataatca 37132657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 1503642 - 1503714
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||||||||||||    
T  1503642 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 1503714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 17841649 - 17841721
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||||||||||||    
T  17841649 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 17841721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 26041912 - 26041984
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||||||||||||    
T  26041912 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 26041984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 40779928 - 40780000
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||||||||||||    
T  40779928 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 40780000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 6108032 - 6108104
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||||||| || |||||||||||||||||||    
T  6108032 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatgacacaataatcacctttagattt 6108104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 10044614 - 10044542
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||  |||||||||||||||||| |||||||||||||||||||    
T  10044614 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 10044542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 14129125 - 14129053
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||  |||||||||||||||||| |||||||||||||||||||    
T  14129125 aatgctagatatcaagaatgattttat-aagaaatattcaagaatgacatggcacaataatcacctttagattt 14129053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 31347575 - 31347647
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| ||||| |||||||||  |||||||||||||||||| |||||||||||||||||||    
T  31347575 aatgctagatatcaagaatgattt-atcaagaaagattcaagaatgacatggcacaataatcacctttagattt 31347647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 37985855 - 37985927
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||  |||||||||||||||||| |||||||||||||||||||    
T  37985855 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 37985927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 129 - 197
Target Start/End: Complemental strand, 35353300 - 35353233
Alignment:
Q  129 tatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagatttta 197  Q
    ||||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||||||| ||||||    
T  35353300 tatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttaaatttta 35353233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 240
Target Start/End: Original strand, 10044390 - 10044465
Alignment:
Q  165 atgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaattaatgttagccaataaaatctca 240  Q
    |||||||| ||||||||||| | ||| ||||||||||||||| ||  || ||||||||||||||||||||||||||    
T  10044390 atgacatgacagaataatcatccttaaattttatcaagaaatagttttggaattaatgttagccaataaaatctca 10044465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 3596840 - 3596912
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||| || |||||||| |||||| |||||||||||||||||||    
T  3596840 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgatatggcacaataatcacctttagattt 3596912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 20091600 - 20091672
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  20091600 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacccttagattt 20091672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 24211171 - 24211243
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||  | |||||||||||||||| |||||||||||||||||||    
T  24211171 aatgctagatatcaagaatgattttat-aagaaagatccaagaatgacatggcacaataatcacctttagattt 24211243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 25581038 - 25581110
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||||||  || |||||||||||||||||||    
T  25581038 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacataacacaataatcacctttagattt 25581110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 32065012 - 32064940
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||| || |||||||||||| || |||||||||||||||||||    
T  32065012 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatgacacaataatcacctttagattt 32064940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 34665647 - 34665575
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  34665647 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacccttagattt 34665575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 37132479 - 37132552
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||||||||||  |||| |||||||||| || |||||||||| ||||||||    
T  37132479 aatgctagatatcaagaatgattttatcaagaaagattcatgaatgacatgacacaataatcacccttagattt 37132552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 42754841 - 42754913
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||| | |||||||||||||||||||    
T  42754841 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggtacaataatcacctttagattt 42754913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 1645763 - 1645835
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||    |||||||||||||||| |||||||||||||||||||    
T  1645763 aatgctagatatcaagaatgattttat-aagaaagaaccaagaatgacatggcacaataatcacctttagattt 1645835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 199
Target Start/End: Complemental strand, 3817967 - 3817914
Alignment:
Q  146 tatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatc 199  Q
    ||||||||||| ||||||||| ||||| ||||||||||||| ||||||||||||    
T  3817967 tatcaagaaaaattcaagaattacatgacagaataatcacccttagattttatc 3817914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 15187826 - 15187754
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||  | |||||||||||| ||| |||||||||||||||||||    
T  15187826 aatgctagatatcaagaatgattttat-aagaaagatccaagaatgacatagcacaataatcacctttagattt 15187754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 195
Target Start/End: Original strand, 30834862 - 30834927
Alignment:
Q  130 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    |||||||||| |||||||||||||||  || |||||||||||| |||||||| |||| ||||||||    
T  30834862 atatcaagaatgattttatcaagaaagattaaagaatgacatgacagaataaccacccttagattt 30834927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 181
Target Start/End: Complemental strand, 1886672 - 1886621
Alignment:
Q  130 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataa 181  Q
    |||||||||| |||||||||||||||  |||||||||||| |||||||||||    
T  1886672 atatcaagaatgattttatcaagaaagattcaagaatgacgtggcagaataa 1886621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 197
Target Start/End: Complemental strand, 30055782 - 30055708
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagatttta 197  Q
    ||||||| |||| ||||| |||||||| ||||||  ||||||||||||||| || |||||||||| ||||||||||    
T  30055782 aatgctagatattaagaatgattttat-aagaaagattcaagaatgacatgacacaataatcacccttagatttta 30055708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 118 - 198
Target Start/End: Original strand, 30055543 - 30055616
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttat 198  Q
    ||||||||||||||| |||| ||||||||||||| ||||||||||       ||||||||||||||||| ||| |||||||    
T  30055543 gagcaatgctatataccaaggaagattttatcaaaaaaatttcaa-------atggcagaataatcacccttaaattttat 30055616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 195
Target Start/End: Complemental strand, 8454064 - 8454027
Alignment:
Q  158 ttcaagaatgacatggcagaataatcacctttagattt 195  Q
    |||||||||||||||||| |||||||||||||||||||    
T  8454064 ttcaagaatgacatggcacaataatcacctttagattt 8454027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 126 - 195
Target Start/End: Complemental strand, 32394118 - 32394051
Alignment:
Q  126 ctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    |||||||||||||| |||||||| || || |||| |||||||||||| || |||||||||||||||||||    
T  32394118 ctatatatcaagaatgattttataaaaaatattt-aagaatgacatg-cacaataatcacctttagattt 32394051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 195
Target Start/End: Original strand, 39772609 - 39772673
Alignment:
Q  130 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    |||||||||| |||||||| ||||||  | ||||||||||||| || |||||||||||||||||||    
T  39772609 atatcaagaatgattttat-aagaaagatccaagaatgacatgacacaataatcacctttagattt 39772673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 197
Target Start/End: Original strand, 24844667 - 24844734
Alignment:
Q  130 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagatttta 197  Q
    ||||||| || |||||||||||||||  || ||||||| ||||||| |||||||||  ||||||||||    
T  24844667 atatcaataatgattttatcaagaaagatttaagaatggcatggcaaaataatcactcttagatttta 24844734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 38017199 - 38017126
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataa-tcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||||||| || ||||| | ||||||||||||    
T  38017199 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatgacacaataatttacctttagattt 38017126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 241
Target Start/End: Complemental strand, 37132647 - 37132618
Alignment:
Q  212 tgaaattaatgttagccaataaaatctcag 241  Q
    ||||||||||||||||||||||||||||||    
T  37132647 tgaaattaatgttagccaataaaatctcag 37132618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 146 - 195
Target Start/End: Original strand, 41819590 - 41819639
Alignment:
Q  146 tatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||||||  ||||||||||||||| || |||||||||| ||||||||    
T  41819590 tatcaagaaagattcaagaatgacatgacacaataatcacccttagattt 41819639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 216 - 252
Target Start/End: Original strand, 30055615 - 30055650
Alignment:
Q  216 attaatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||||||||||||||||||||| ||||||||||    
T  30055615 attaatgttagccaataaaatctcag-ctggccggaa 30055650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 124; Significance: 7e-64; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 113 - 252
Target Start/End: Original strand, 40214983 - 40215122
Alignment:
Q  113 aaatggagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcct 212  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |    
T  40214983 aaattgagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtctt 40215082  T
Q  213 gaaattaatgttagccaataaaatctcagcctggccggaa 252  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  40215083 gaaattaatgttagccaataaaatctcagcctggccggaa 40215122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 118 - 252
Target Start/End: Original strand, 19015404 - 19015538
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  19015404 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggcagaataatcacccttagattttatcaagaaatagtcctgaaat 19015503  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||| ||||||||||||||||||||||||||    
T  19015504 taatgttaaccaataaaatctcagcctggccggaa 19015538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 118 - 252
Target Start/End: Original strand, 25463676 - 25463810
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||    
T  25463676 gagcaatgctatatatcaagaaagattttatgaagaaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaat 25463775  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||||||||||||||||||||||||||||||    
T  25463776 taatgttagccaataaaatctcagcctggccggaa 25463810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 118 - 252
Target Start/End: Original strand, 44094698 - 44094832
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||    
T  44094698 gagcaatgctatatatcaagaaatattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaat 44094797  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||||||||||||||||||| ||||||||||    
T  44094798 taatgttagccaataaaatctcagtctggccggaa 44094832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 118 - 241
Target Start/End: Original strand, 18404442 - 18404565
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  18404442 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggtagaataatcacctttagattttatcaagaaatagtcctgaaat 18404541  T
Q  218 taatgttagccaataaaatctcag 241  Q
    ||||||||||||||||||||||||    
T  18404542 taatgttagccaataaaatctcag 18404565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 118 - 249
Target Start/End: Complemental strand, 37821899 - 37821768
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  37821899 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggcagaataatcacccttagattttatcaagaaatagtcctgaaat 37821800  T
Q  218 taatgttagccaataaaatctcagcctggccg 249  Q
    |||||||| |||||||||||||||||||||||    
T  37821799 taatgttaaccaataaaatctcagcctggccg 37821768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 118 - 252
Target Start/End: Original strand, 6883487 - 6883621
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    |||||||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  6883487 gagcaatgctatatattaagaaagatttttttaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaat 6883586  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||| ||||||||||||||||||||||||||    
T  6883587 taatgttaaccaataaaatctcagcctggccggaa 6883621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 118 - 252
Target Start/End: Complemental strand, 36966773 - 36966639
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  36966773 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggcagaataatcacccttagattttatcaagaaatagtcctgaaat 36966674  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||| ||||||||||||||| ||||||||||    
T  36966673 taatgttaaccaataaaatctcagtctggccggaa 36966639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 118 - 252
Target Start/End: Complemental strand, 9910358 - 9910224
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||    
T  9910358 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcaaccttagattttatcaagaaatagtcctgaaat 9910259  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||| |||||||||||||||  |||||||||    
T  9910258 taatgttaaccaataaaatctcagtatggccggaa 9910224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 121 - 252
Target Start/End: Original strand, 3559620 - 3559751
Alignment:
Q  121 caatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaattaa 220  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||| ||||||||||||||| ||| |||||||||    
T  3559620 caatgctatatatcaagaaagattttatcaaaaaaattttaagaatgacatggcagaataatcacccttaaattttatcaagaaatagtcttgaaattaa 3559719  T
Q  221 tgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||||||||||||||||||||| |||||    
T  3559720 tgttagccaataaaatctcagcctgggcggaa 3559751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 118 - 249
Target Start/End: Complemental strand, 41876507 - 41876376
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||    
T  41876507 gagcaatgctatatatcaagaaagattttttcaaaaaaattttaagaatgacatggcagaataatcacccttaggttttatcaagaaatagtcctgaaat 41876408  T
Q  218 taatgttagccaataaaatctcagcctggccg 249  Q
    |||||||| |||||||||||||||||||||||    
T  41876407 taatgttaaccaataaaatctcagcctggccg 41876376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 122 - 235
Target Start/End: Complemental strand, 16045859 - 16045746
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaattaat 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  || ||||||||||    
T  16045859 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatattcttgaaattaat 16045760  T
Q  222 gttagccaataaaa 235  Q
    ||||||||||||||    
T  16045759 gttagccaataaaa 16045746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 118 - 238
Target Start/End: Complemental strand, 32000332 - 32000212
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||| |||| |||||||||||||||||||||| |||||||    
T  32000332 gagcaatgctatatatcaagaaagattttctcaagaaaaattcaagaatgacatgacagaataaccacccttagattttatcaagaaattgtactgaaat 32000233  T
Q  218 taatgttagccaataaaatct 238  Q
    |||||||||||||||||||||    
T  32000232 taatgttagccaataaaatct 32000212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 25973414 - 25973534
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||  |||||||||    
T  25973414 gagcaatgttatatatcaagaaagattttatcatgaaaatttcaagaatgaca-ggcagaataatcacccttagattttatcaagaaataatcctgaaat 25973512  T
Q  218 taatgttagccaataaaatctc 239  Q
    ||||||||||||||||||||||    
T  25973513 taatgttagccaataaaatctc 25973534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 118 - 252
Target Start/End: Original strand, 40273702 - 40273836
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||| || |||||||||| ||||||||||| |||||||||| |||||||    
T  40273702 gagcaatgctagatatcaagaaagattttttcaagaaaaattcaagaatgacatgtcaaaataatcacccttagattttattaagaaattgtactgaaat 40273801  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||||||||||||||||| | | ||||||||    
T  40273802 taatgttagccaataaaatctctgtcgggccggaa 40273836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 118 - 252
Target Start/End: Complemental strand, 27523322 - 27523186
Alignment:
Q  118 gagcaatgctatata--tcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaa 215  Q
    |||||||||||||||  |||||||  ||||||||||||||| || |||||||||||| ||||||||||||| ||| |||||||||||||||||||| |||    
T  27523322 gagcaatgctatatacatcaagaacaattttatcaagaaaaatttaagaatgacatgacagaataatcacccttaaattttatcaagaaattgtcccgaa 27523223  T
Q  216 attaatgttagccaataaaatctcagcctggccggaa 252  Q
    ||||||||||||||||||||||||| |||||||||||    
T  27523222 attaatgttagccaataaaatctcatcctggccggaa 27523186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 122 - 252
Target Start/End: Complemental strand, 33786695 - 33786566
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaattaat 221  Q
    ||||||| |||||||||| ||||| |||||||||  |||||||||||||||||| |||||||||| ||| |||||||||||||||||| |||||||||||    
T  33786695 aatgctagatatcaagaatgattt-atcaagaaagattcaagaatgacatggcacaataatcacccttaaattttatcaagaaattgtactgaaattaat 33786597  T
Q  222 gttagccaataaaatctcagcctggccggaa 252  Q
    |||||||||||||||||| | | ||||||||    
T  33786596 gttagccaataaaatctctgtcgggccggaa 33786566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 118 - 252
Target Start/End: Complemental strand, 44691094 - 44690960
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    |||||||| | |||||||||||||||||||| || |||  ||||||||| ||||||||||||||| ||  |||||||||||||||||||| |||  ||||    
T  44691094 gagcaatgttgtatatcaagaaagattttataaaaaaagattcaagaattacatggcagaataataactcttagattttatcaagaaattatcccaaaat 44690995  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||||||||||||||||||| ||||||||||    
T  44690994 taatgttagccaataaaatctcagtctggccggaa 44690960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 118 - 245
Target Start/End: Original strand, 51737510 - 51737632
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    |||||||||||||||||||||||| |     ||||||||||| |||||||| | ||||||||||||||| ||| ||||||||||||||| ||||||||||    
T  51737510 gagcaatgctatatatcaagaaagtt-----caagaaaattttaagaatgataaggcagaataatcacccttaaattttatcaagaaatagtcctgaaat 51737604  T
Q  218 taatgttagccaataaaatctcagcctg 245  Q
    |||||||| |||||||||||||||||||    
T  51737605 taatgttaaccaataaaatctcagcctg 51737632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 118 - 234
Target Start/End: Original strand, 34519758 - 34519874
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||||||||||| ||||||  ||||| |||| ||| | |||||||||  | |||||||||||||| |||||||||||||||    
T  34519758 gagcaatgctatatatcaagaaagattttattaagaaagattcaaaaatgccatagaagaataatcgaccttagattttatcaaaaaattgtcctgaaat 34519857  T
Q  218 taatgttagccaataaa 234  Q
    |||||||||||||||||    
T  34519858 taatgttagccaataaa 34519874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 146 - 236
Target Start/End: Original strand, 10167428 - 10167518
Alignment:
Q  146 tatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaattaatgttagccaataaaat 236  Q
    ||||||||||  || ||||||||||||  ||||||||||  ||||||||||||||| |||||||| | |||||||||||||||||||||||    
T  10167428 tatcaagaaagatttaagaatgacatgatagaataatcatttttagattttatcaaaaaattgtctttaaattaatgttagccaataaaat 10167518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 19015670 - 19015598
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||||||||||||    
T  19015670 aatgctacatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 19015598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 51737771 - 51737699
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||||||||||||    
T  51737771 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 51737699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 191 - 249
Target Start/End: Complemental strand, 20305123 - 20305065
Alignment:
Q  191 gattttatcaagaaattgtcctgaaattaatgttagccaataaaatctcagcctggccg 249  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||| ||||||    
T  20305123 gattttatcaagaaataatcctgaaattaatgttagccaataaaatctcagcttggccg 20305065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 6883753 - 6883681
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||| ||||||||||||||    
T  6883753 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcataatattcacctttagattt 6883681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 130 - 195
Target Start/End: Original strand, 9910098 - 9910162
Alignment:
Q  130 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||||||||||||    
T  9910098 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 9910162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 20304929 - 20305001
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||  |||||||||||||||||| |||||||||||||||||||    
T  20304929 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 20305001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 36966507 - 36966579
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||| |||||||| |||||||||||||||||||    
T  36966507 aatgctagatatcaagaatgattttat-aagaaaaattcaagaataacatggcacaataatcacctttagattt 36966579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 37821633 - 37821705
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||||||| || |||||||||||||||||||    
T  37821633 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatgacacaataatcacctttagattt 37821705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 40215254 - 40215182
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||  |||||||||||||||||| |||||||||||||||||||    
T  40215254 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 40215182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 41876241 - 41876313
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||| ||| |||||||||||||||||||    
T  41876241 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatagcacaataatcacctttagattt 41876313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 194
Target Start/End: Original strand, 44690828 - 44690892
Alignment:
Q  130 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagatt 194  Q
    ||||||| || |||||||||||||||  ||||||||||||||||||||||||||||| |||||||    
T  44690828 atatcaataatgattttatcaagaaagattcaagaatgacatggcagaataatcacccttagatt 44690892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 25463942 - 25463870
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||  | |||||||||||||||| |||||||||||||||||||    
T  25463942 aatgctagatatcaagaatgattttat-aagaaagatccaagaatgacatggcacaataatcacctttagattt 25463870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 25973673 - 25973601
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||||||| || |||||||||||||| ||||    
T  25973673 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatgacacaataatcacctttaaattt 25973601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 32000065 - 32000137
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| ||||| |||||||||  |||||||||||||||||| |||||||||| ||||||||    
T  32000065 aatgctagatatcaagaatgattt-atcaagaaagattcaagaatgacatggcacaataatcacccttagattt 32000137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 33786430 - 33786502
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| ||||| |||||||||  |||||||||||||||||| |||||||||| ||||||||    
T  33786430 aatgctagatatcaagaatgattt-atcaagaaagattcaagaatgacatggcacaataatcacccttagattt 33786502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 40273974 - 40273902
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| ||||| |||||||||  |||||||||||||||||| |||||||||| ||||||||    
T  40273974 aatgctagatatcaagaatgattt-atcaagaaatattcaagaatgacatggcacaataatcacccttagattt 40273902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 18404714 - 18404642
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||  || ||||||||||||||| ||||||||| |||||||||    
T  18404714 aatgctagatatcaagaatgattttat-aagaaagatttaagaatgacatggcacaataatcacatttagattt 18404642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 195
Target Start/End: Original strand, 19722906 - 19722970
Alignment:
Q  130 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    |||||||||| |||||||| ||||||  ||||||||||||||| || |||||||||||||||||||    
T  19722906 atatcaagaatgattttat-aagaaagattcaagaatgacatgacacaataatcacctttagattt 19722970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 191
Target Start/End: Original strand, 52064376 - 52064445
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttag 191  Q
    ||||||| ||||||| || |||||||||||||||  ||||||||||||||| ||||||| ||||| ||||    
T  52064376 aatgctagatatcaaaaatgattttatcaagaaagattcaagaatgacatgacagaatattcacccttag 52064445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 197
Target Start/End: Original strand, 27523054 - 27523129
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagatttta 197  Q
    |||| ||||||||||||| |||||||||||||||  |||||||||   |||||||| |||||||| || |||||||    
T  27523054 aatgttatatatcaagaatgattttatcaagaaagattcaagaatcgtatggcagattaatcaccctttgatttta 27523129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 241
Target Start/End: Original strand, 51621002 - 51621053
Alignment:
Q  190 agattttatcaagaaattgtcctgaaattaatgttagccaataaaatctcag 241  Q
    ||||||||| ||||||| |||| |||||||||||||| ||||||||||||||    
T  51621002 agattttattaagaaatagtccagaaattaatgttagtcaataaaatctcag 51621053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 194 - 248
Target Start/End: Original strand, 52329345 - 52329399
Alignment:
Q  194 tttatcaagaaattgtcctgaaattaatgttagccaataaaatctcagcctggcc 248  Q
    ||||||||||||  || | ||||||||||||| ||||||||||||||||||||||    
T  52329345 tttatcaagaaagagttccgaaattaatgttaaccaataaaatctcagcctggcc 52329399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 44094963 - 44094891
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| ||||||||||  ||||||| ||||||  | ||||||||||||| || |||||||||||||||||||    
T  44094963 aatgctagatatcaagaattattttat-aagaaagatccaagaatgacatgacacaataatcacctttagattt 44094891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 155
Target Start/End: Original strand, 51620980 - 51621017
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaa 155  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  51620980 gagcaatgctatatatcaagaaagattttattaagaaa 51621017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 3559883 - 3559811
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||  | ||||||||| ||| || |||||||||||||| ||||    
T  3559883 aatgctagatatcaagaatgattttat-aagaaagatccaagaatgatatgacacaataatcacctttatattt 3559811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 189 - 226
Target Start/End: Complemental strand, 22159267 - 22159230
Alignment:
Q  189 tagattttatcaagaaattgtcctgaaattaatgttag 226  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  22159267 tagattttatcaagaaattgtcccgaaattattgttag 22159230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 118 - 155
Target Start/End: Original strand, 52329319 - 52329356
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaa 155  Q
    |||||||| |||||||||||||||| ||||||||||||    
T  52329319 gagcaatgttatatatcaagaaagaatttatcaagaaa 52329356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 195
Target Start/End: Complemental strand, 52329506 - 52329469
Alignment:
Q  158 ttcaagaatgacatggcagaataatcacctttagattt 195  Q
    |||||||||||||| |||||||||||||| ||||||||    
T  52329506 ttcaagaatgacatagcagaataatcacccttagattt 52329469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 123; Significance: 3e-63; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 118 - 252
Target Start/End: Complemental strand, 11361196 - 11361062
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  11361196 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaat 11361097  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||||||||||||||||||||||||||||||    
T  11361096 taatgttagccaataaaatctcagcctggccggaa 11361062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 118 - 252
Target Start/End: Original strand, 4892202 - 4892336
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  4892202 gagcaatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaat 4892301  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||| ||||||||||||||||||||||||||    
T  4892302 taatgttaaccaataaaatctcagcctggccggaa 4892336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 118 - 252
Target Start/End: Original strand, 25398238 - 25398372
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  25398238 gagcaatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaat 25398337  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||| ||||||||||||||||||||||||||    
T  25398338 taatgttaaccaataaaatctcagcctggccggaa 25398372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 118 - 252
Target Start/End: Original strand, 2477636 - 2477770
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||    
T  2477636 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaat 2477735  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    ||||||||| ||||||||| |||||||||||||||    
T  2477736 taatgttagtcaataaaatttcagcctggccggaa 2477770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 118 - 252
Target Start/End: Original strand, 3362778 - 3362912
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||    
T  3362778 gagcaatgctatatatcaagaaagattttatcaagaaaattccaagaatgacatggcagaataaccacccttagattttatcaagaaatagtcctgaaat 3362877  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||| ||||||||||||||| ||||||||||    
T  3362878 taatgttaaccaataaaatctcagtctggccggaa 3362912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 118 - 252
Target Start/End: Complemental strand, 6043576 - 6043442
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| || |||||||    
T  6043576 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggaagaataatcacccttagattttatcaagaaatagtgctgaaat 6043477  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||| ||| ||||||||||||||||||||||||||    
T  6043476 taatattaaccaataaaatctcagcctggccggaa 6043442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 118 - 252
Target Start/End: Original strand, 12850801 - 12850935
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||| ||||||||||||||||||| ||||||||||    
T  12850801 gagcaatgctatatatcaagaaagattttatcaagaaaattccaaaaatgacatggcagaataaccacccttagattttatcaagaaatagtcctgaaat 12850900  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||| ||||||||||||||||||||||||||    
T  12850901 taatgttaaccaataaaatctcagcctggccggaa 12850935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 118 - 252
Target Start/End: Complemental strand, 33584394 - 33584260
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||    
T  33584394 gagcaatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatcacccttaaattttatcaagaaatagtcctgaaat 33584295  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||| ||||||||||||||||||||||||||    
T  33584294 taatgttaaccaataaaatctcagcctggccggaa 33584260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 118 - 245
Target Start/End: Original strand, 14138668 - 14138795
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| ||||||||||    
T  14138668 gagcaatgttatatatcaagaaagattttatcaagaaaatttcaagaattacatggcagaataatcacccttaaattttatcaagaaatagtcctgaaat 14138767  T
Q  218 taatgttagccaataaaatctcagcctg 245  Q
    ||||||||||||||||||||||||||||    
T  14138768 taatgttagccaataaaatctcagcctg 14138795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 118 - 249
Target Start/End: Complemental strand, 38899791 - 38899660
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||    
T  38899791 gagcaatgctatatatcaagaaagattttatcaagaaaattccaagaatgacatggcagaataaccacccttagattttatcaagaaatagtcctgaaat 38899692  T
Q  218 taatgttagccaataaaatctcagcctggccg 249  Q
    |||||||| ||||||||||||||| |||||||    
T  38899691 taatgttaaccaataaaatctcagtctggccg 38899660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 122 - 252
Target Start/End: Original strand, 8145379 - 8145509
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaattaat 221  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||| ||||    
T  8145379 aatgttatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaactaat 8145478  T
Q  222 gttagccaataaaatctcagcctggccggaa 252  Q
    ||||||||||||||||||||||||| |||||    
T  8145479 gttagccaataaaatctcagcctggtcggaa 8145509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 22913119 - 22912998
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  22913119 gagcaatgctatatatcaagaaagattttttcaagaaaaattcaagaatgacatggcagaataatcacccttagattttatcaagaaattgtactgaaat 22913020  T
Q  218 taatgttagccaataaaatctc 239  Q
    ||||||||||||||||||||||    
T  22913019 taatgttagccaataaaatctc 22912998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 118 - 245
Target Start/End: Complemental strand, 12614798 - 12614671
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||| ||||||||||||||  ||||||||||||||| || |||||||||| ||||||||||||||||||||||||||||||    
T  12614798 gagcaatgctatatatcaagaaatattttatcaagaaagattcaagaatgacatgacataataatcacccttagattttatcaagaaattgtcctgaaat 12614699  T
Q  218 taatgttagccaataaaatctcagcctg 245  Q
    ||||||||||||||||||||||||||||    
T  12614698 taatgttagccaataaaatctcagcctg 12614671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 118 - 252
Target Start/End: Complemental strand, 4434072 - 4433938
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| || |||||||    
T  4434072 gagcaatgctatatatcaagaaagatttttttaagaaaatttcaagaatgatatggcagaataatcacccttagattttatcaagaaatagttctgaaat 4433973  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||| ||||||||||||||| ||||||||||    
T  4433972 taatgttaaccaataaaatctcagtctggccggaa 4433938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 117 - 252
Target Start/End: Complemental strand, 37321860 - 37321724
Alignment:
Q  117 ggagcaatgctatatatc-aagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaa 215  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||| |||| ||| ||||    
T  37321860 ggagcaatgctatatatctaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttaaattttatcaataaatagtcttgaa 37321761  T
Q  216 attaatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||||||||||||||||||||| || |||||||    
T  37321760 attaatgttagccaataaaatctcagtctagccggaa 37321724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 118 - 252
Target Start/End: Complemental strand, 3522071 - 3521937
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    |||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| || |||||||    
T  3522071 gagcaatgttatatatcaagaaagattttttcaagaaaatttcaaaaatgacatggcagaataatcaccattagattttatcaagaaatagttctgaaat 3521972  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||| |||||||||||| ||  |||||||||    
T  3521971 taatgttaaccaataaaatcttagtttggccggaa 3521937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 118 - 252
Target Start/End: Complemental strand, 17545750 - 17545616
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||| | ||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  17545750 gagcaatgctatatatcaagaaaaaatttctcaagaaaaattcaagaatgacatggcagaataatcaccattagattttatcaagaaattgtactgaaat 17545651  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    ||||||||| |||||||||||| | | ||||||||    
T  17545650 taatgttagtcaataaaatctctgtcgggccggaa 17545616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 146 - 252
Target Start/End: Complemental strand, 31640977 - 31640871
Alignment:
Q  146 tatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaattaatgttagccaataaaatctcagcctg 245  Q
    ||||||||||  |||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  31640977 tatcaagaaagattcaagaatgacatggcagaataaccacccttagattttatcaagaaattgtcatgaaattaatgttagccaataaaatctcagcctg 31640878  T
Q  246 gccggaa 252  Q
    |||||||    
T  31640877 gccggaa 31640871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 122 - 236
Target Start/End: Original strand, 27481830 - 27481940
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaattaat 221  Q
    |||||||| ||| |||||||||||||||||||||| |||||||||||||||   |||||||||| ||||| |||||| |||||||||||  |||||||||    
T  27481830 aatgctatgtattaagaaagattttatcaagaaaaattcaagaatgacatg---gaataatcacatttag-ttttatgaagaaattgtcacgaaattaat 27481925  T
Q  222 gttagccaataaaat 236  Q
    |||||||||||||||    
T  27481926 gttagccaataaaat 27481940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 4892468 - 4892396
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||||||||||||    
T  4892468 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 4892396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 33584128 - 33584200
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||||||||||||    
T  33584128 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 33584200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 130 - 190
Target Start/End: Original strand, 10458409 - 10458469
Alignment:
Q  130 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcaccttta 190  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  10458409 atatcaagaaaaattttatcaagaaaaattcaagaatgacatggcaaaataatcaccttta 10458469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 3521806 - 3521878
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||||||||||||    
T  3521806 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacctttagattt 3521878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 6043311 - 6043383
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||||||||||||    
T  6043311 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacctttagattt 6043383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 8145639 - 8145567
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||  |||||||||||||||||| |||||||||||||||||||    
T  8145639 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 8145567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 12851068 - 12850996
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| ||||| |||||||||||||    
T  12851068 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataaccacctttagattt 12850996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 25398504 - 25398432
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||| ||||| |||||||||||| |||||||||||||||||||    
T  25398504 aatgctagatatcaagaatgattttat-aagaaaaattcaacaatgacatggcacaataatcacctttagattt 25398432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 38899524 - 38899597
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| || |||| |||||||||||||||||| ||||| |||||||||||||    
T  38899524 aatgctagatatcaagaatgattttataaaaaaaaattcaagaatgacatggcacaataaccacctttagattt 38899597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 12614536 - 12614609
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||| | ||||||||||| |||  || ||||||||||||||| |||||||||||||||||||    
T  12614536 aatgctagatatcaagtatgattttatcaaaaaagatttaagaatgacatggcacaataatcacctttagattt 12614609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 14138933 - 14138861
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||| ||||| |||||||| ||||||  |||||||||||||||||| |||||||||||||||||||    
T  14138933 aatgctagatattaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 14138861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 22912856 - 22912928
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| ||||| |||||||||  |||||||||||||||||| |||||||||| ||||||||    
T  22912856 aatgctagatatcaagaatgattt-atcaagaaagattcaagaatgacatggcacaataatcacccttagattt 22912928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 37321592 - 37321664
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||| |||||| |||||||||||||||||||    
T  37321592 aatgctagatatcaagaatgattttat-aagaaatattcaagaatgaaatggcacaataatcacctttagattt 37321664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 3363045 - 3362973
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||| || |||||||||||| || ||||| |||||||||||||    
T  3363045 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatgacacaataaccacctttagattt 3362973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 135 - 196
Target Start/End: Complemental strand, 27482077 - 27482016
Alignment:
Q  135 aagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagatttt 196  Q
    ||||| ||||||||||| |||  ||||||||||||||  |||||||||||||||||||||||    
T  27482077 aagaatgattttatcaaaaaagattcaagaatgacataacagaataatcacctttagatttt 27482016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 2477902 - 2477830
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||  |  ||||||||||||||| ||| |||||||||||||||    
T  2477902 aatgctagatatcaagaatgattttat-aagaaagatctaagaatgacatggcacaatgatcacctttagattt 2477830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 252
Target Start/End: Complemental strand, 36880299 - 36880254
Alignment:
Q  207 tgtcctgaaattaatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||||||||||||||||||||||||| |||| |||| |||||    
T  36880299 tgtcctgaaattaatgttagccaataaaatttcagtctggtcggaa 36880254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 194
Target Start/End: Original strand, 31640763 - 31640811
Alignment:
Q  146 tatcaagaaaatttcaagaatgacatggcagaataatcacctttagatt 194  Q
    ||||||||||  ||||||||||||||||||||||||||  |||||||||    
T  31640763 tatcaagaaagattcaagaatgacatggcagaataatcgactttagatt 31640811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 195
Target Start/End: Original strand, 4433845 - 4433879
Alignment:
Q  161 aagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||||||||||| |||||||||||||||||||    
T  4433845 aagaatgacatggcacaataatcacctttagattt 4433879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 195
Target Start/End: Original strand, 11360949 - 11361002
Alignment:
Q  141 gattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    |||||||| ||||||  |||||||||||||||||| |||||||| ||||||||||    
T  11360949 gattttat-aagaaagattcaagaatgacatggcacaataatcatctttagattt 11361002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 118 - 155
Target Start/End: Original strand, 13664642 - 13664679
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaa 155  Q
    |||||||| ||||||| |||||||||||||||||||||    
T  13664642 gagcaatgttatatattaagaaagattttatcaagaaa 13664679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 121; Significance: 4e-62; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 108 - 252
Target Start/End: Complemental strand, 4974809 - 4974666
Alignment:
Q  108 aaataaaatggagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaatt 207  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  4974809 aaataaaatg-agcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatt 4974711  T
Q  208 gtcctgaaattaatgttagccaataaaatctcagcctggccggaa 252  Q
     |||||||||||||||||||||||||||||||||  |||||||||    
T  4974710 atcctgaaattaatgttagccaataaaatctcagtttggccggaa 4974666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 118 - 252
Target Start/End: Original strand, 45637712 - 45637846
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  45637712 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaat 45637811  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    ||||| |||||||||||||||||| ||||||||||    
T  45637812 taatgctagccaataaaatctcagtctggccggaa 45637846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 118 - 252
Target Start/End: Complemental strand, 48880992 - 48880858
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||    
T  48880992 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaat 48880893  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||| ||||||||||||||||||||||||||    
T  48880892 taatgttaaccaataaaatctcagcctggccggaa 48880858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 118 - 252
Target Start/End: Original strand, 34482835 - 34482969
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  34482835 gagcaatgctatatatcaagaaagattttattaagaaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaat 34482934  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||||||||||||||||||| ||||||||||    
T  34482935 taatgttagccaataaaatctcagtctggccggaa 34482969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 118 - 252
Target Start/End: Original strand, 15329273 - 15329407
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||| ||||||    
T  15329273 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatcacccttagattttatcaagaaatagtcttgaaat 15329372  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    ||||||||| |||||||||||||| ||||||||||    
T  15329373 taatgttagtcaataaaatctcagactggccggaa 15329407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 118 - 252
Target Start/End: Original strand, 42611811 - 42611945
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||    
T  42611811 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaat 42611910  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    ||||||||||||||||||| |||| ||| ||||||    
T  42611911 taatgttagccaataaaatttcagtctgaccggaa 42611945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 118 - 249
Target Start/End: Original strand, 35444558 - 35444689
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || |||||||    
T  35444558 gagcaatgctatatattaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagttctgaaat 35444657  T
Q  218 taatgttagccaataaaatctcagcctggccg 249  Q
    |||||||| |||||||||||||||||||||||    
T  35444658 taatgttaaccaataaaatctcagcctggccg 35444689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 118 - 252
Target Start/End: Original strand, 3961979 - 3962113
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||| ||||||||||||||| ||| ||||||    
T  3961979 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatgacagaataatcacccttaaattttatcaagaaatagtcttgaaat 3962078  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    ||||||||||||||||||||||||| |||||||||    
T  3962079 taatgttagccaataaaatctcagcttggccggaa 3962113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 118 - 252
Target Start/End: Complemental strand, 15577915 - 15577781
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||  ||| ||||||    
T  15577915 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagactttatcaagaaaaagtcttgaaat 15577816  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    ||||||||||||||| |||||||| ||||||||||    
T  15577815 taatgttagccaatataatctcagtctggccggaa 15577781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 118 - 252
Target Start/End: Complemental strand, 20010162 - 20010029
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||| |||||||||||||| |||||||||||||||    
T  20010162 gagcaatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacata-cagaataatcacccttagattttatcaaaaaattgtcctgaaat 20010064  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    ||||||||||||||||||||||| |||||||||||    
T  20010063 taatgttagccaataaaatctcaacctggccggaa 20010029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 118 - 252
Target Start/End: Original strand, 24394972 - 24395106
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||| |||| || |||||||    
T  24394972 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataacaacctttagattttatcaaaaaatagttctgaaat 24395071  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    ||||||||||||||||||||||| |||||||||||    
T  24395072 taatgttagccaataaaatctcaacctggccggaa 24395106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 117 - 252
Target Start/End: Complemental strand, 25167916 - 25167781
Alignment:
Q  117 ggagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaa 216  Q
    |||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||||||||||| | ||||||||||||||||||| || ||||||    
T  25167916 ggagcaatgctatatatcaagaaagatttttttaagaaaattttaagaatgacatggcagaataatcatccttagattttatcaagaaatagttctgaaa 25167817  T
Q  217 ttaatgttagccaataaaatctcagcctggccggaa 252  Q
    ||||||||| ||||||||||||||| ||||||||||    
T  25167816 ttaatgttaaccaataaaatctcagtctggccggaa 25167781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 117 - 252
Target Start/End: Original strand, 29737138 - 29737273
Alignment:
Q  117 ggagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaa 216  Q
    |||| ||||||||||||||||||||||||| | |||||||||| ||||||||||||| |||||||||||| ||||||||||| |||||||||||| ||||    
T  29737138 ggagtaatgctatatatcaagaaagatttttttaagaaaattttaagaatgacatggtagaataatcacccttagattttattaagaaattgtcccgaaa 29737237  T
Q  217 ttaatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||||||||||||||||||| |||| ||||||    
T  29737238 ttaatgttagccaataaaatctcaacctgaccggaa 29737273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 118 - 252
Target Start/End: Original strand, 15238382 - 15238516
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||| | ||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  15238382 gagcaatgctatatatcaagaaaaaatttctcaagaaaaattcaagaatgacatggcagaataatcaccattagattttatcaagaaattgtactgaaat 15238481  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    ||||||||| |||||||||||| | | ||||||||    
T  15238482 taatgttagtcaataaaatctctgtcgggccggaa 15238516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 118 - 252
Target Start/End: Complemental strand, 37477145 - 37477011
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||||||||| ||||||||| || |||||||||||||||||||||||| | ||| |||||||||||||||||| |||||||    
T  37477145 gagcaatgctatatatcaagaaagattttctcaagaaaaatttaagaatgacatggcagaataatcatccttaaattttatcaagaaattgtactgaaat 37477046  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||||||||||||||||| | | ||||||||    
T  37477045 taatgttagccaataaaatctctgtcgggccggaa 37477011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 121 - 241
Target Start/End: Complemental strand, 36790528 - 36790408
Alignment:
Q  121 caatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaattaa 220  Q
    ||||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||| ||| ||| |||||||||||||||||| ||||||||||    
T  36790528 caatgctatatatcaagaaagtttttatcaagaaaaatttaagaatgacatggcagaataattacccttaaattttatcaagaaattgttctgaaattaa 36790429  T
Q  221 tgttagccaataaaatctcag 241  Q
    |||||||||||||||||||||    
T  36790428 tgttagccaataaaatctcag 36790408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 118 - 252
Target Start/End: Original strand, 42696083 - 42696217
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    |||||||| |||||||||||||||||||||| || ||  ||| ||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||||    
T  42696083 gagcaatgttatatatcaagaaagattttattaaaaattttttaagaatgacatagcagaataatcacccttatattttatcaagaaattgtcctgaaat 42696182  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    ||||||||| ||||||||||||| |||||||||||    
T  42696183 taatgttagtcaataaaatctcaacctggccggaa 42696217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 18036978 - 18037099
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    |||||||| |||||||||||||||||||| ||||||||| || |||||||||||||||||||||||||| ||| |||||||||| ||||||| |||||||    
T  18036978 gagcaatgatatatatcaagaaagattttttcaagaaaaatttaagaatgacatggcagaataatcacccttaaattttatcaaaaaattgtactgaaat 18037077  T
Q  218 taatgttagccaataaaatctc 239  Q
    ||||||||||||||||||||||    
T  18037078 taatgttagccaataaaatctc 18037099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 146 - 252
Target Start/End: Original strand, 30848597 - 30848703
Alignment:
Q  146 tatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaattaatgttagccaataaaatctcagcctg 245  Q
    |||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||    
T  30848597 tatcaagaaaattttaagaatgacatggcagaataatcatccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagtctg 30848696  T
Q  246 gccggaa 252  Q
    |||||||    
T  30848697 gccggaa 30848703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 144 - 246
Target Start/End: Complemental strand, 40880831 - 40880729
Alignment:
Q  144 tttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaattaatgttagccaataaaatctcagcc 243  Q
    |||||||||||||  |||||||||||||||||||||||||| | ||| ||||||| |||||||| |||||||||||||||||||||||||||||| ||||    
T  40880831 tttatcaagaaaaactcaagaatgacatggcagaataatcatccttaaattttatgaagaaattatcctgaaattaatgttagccaataaaatcttagcc 40880732  T
Q  244 tgg 246  Q
    |||    
T  40880731 tgg 40880729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 25167655 - 25167727
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||||||||||||    
T  25167655 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 25167727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 48880726 - 48880798
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| ||||||||| |||||||||    
T  48880726 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacatttagattt 48880798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 109 - 195
Target Start/End: Complemental strand, 30848847 - 30848763
Alignment:
Q  109 aataaaatggagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    |||||||||||  ||||||| |||||||||| | |||||| ||||||| |||||||||||||||||| |||||||||||||| ||||    
T  30848847 aataaaatggaa-aatgctagatatcaagaatgcttttat-aagaaaaattcaagaatgacatggcacaataatcacctttaaattt 30848763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 3962244 - 3962172
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||  | |||||||||||||||| |||||||||||||||||||    
T  3962244 aatgctagatatcaagaatgattttat-aagaaatatccaagaatgacatggcacaataatcacctttagattt 3962172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 24395237 - 24395165
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| || || ||| |||||||||||||||| |||||||||||||||||||    
T  24395237 aatgctagatatcaagaatgattttataaaaaagatt-caagaatgacatggcacaataatcacctttagattt 24395165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 34483096 - 34483032
Alignment:
Q  130 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    |||||||||| |||||||| ||||||  |||||||||||||||||| |||||||||||||||||||    
T  34483096 atatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 34483032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 35445663 - 35445591
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||| ||| || |||||||||||||||||||    
T  35445663 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgatatgacacaataatcacctttagattt 35445591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 45637977 - 45637905
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||| ||||| |||||||| ||||||  |||||||||||||||||| |||||||||||||||||||    
T  45637977 aatgctagatattaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 45637905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 4974534 - 4974606
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| || || ||| |||||||||||||||| |||||||||| ||||||||    
T  4974534 aatgctagatatcaagaatgattttataaaaaagatt-caagaatgacatggcacaataatcacccttagattt 4974606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 15329540 - 15329468
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||| ||||| |||||||| ||||||  |||||||||||||||||| ||||||||| |||||||||    
T  15329540 aatgctagatataaagaatgattttat-aagaaatattcaagaatgacatggcacaataatcacttttagattt 15329468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 15577646 - 15577718
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||  | ||||||||||||| || |||||||||||||||||||    
T  15577646 aatgctagatatcaagaatgattttat-aagaaagatccaagaatgacatgtcacaataatcacctttagattt 15577718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 42612077 - 42612005
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||  |  ||||||||||||||| |||||||||||||||||||    
T  42612077 aatgctagatatcaagaatgattttat-aagaaagatctaagaatgacatggcacaataatcacctttagattt 42612005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 42696342 - 42696277
Alignment:
Q  130 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| || ||||||||||| |||| |||||||||||||||| | |||||||||| ||||||||    
T  42696342 atatcaataatgattttatcaaaaaaaattcaagaatgacatggtacaataatcacccttagattt 42696277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 29737403 - 29737338
Alignment:
Q  130 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    |||||||||| |||||||||||||||  || |||||| ||||| || |||||||||| ||||||||    
T  29737403 atatcaagaatgattttatcaagaaagatttaagaataacatgtcacaataatcacccttagattt 29737338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 35876510 - 35876438
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||  |  || |||||||||||| |||||||||||||||||||    
T  35876510 aatgctagatatcaagaatgattttat-aagaaatatctaaaaatgacatggcacaataatcacctttagattt 35876438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 37476879 - 37476951
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| ||||| |||||||||  || || |||||||||||| |||||||||| ||||||||    
T  37476879 aatgctagatatcaagaatgattt-atcaagaaagatttaataatgacatggcacaataatcacccttagattt 37476951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 18037243 - 18037171
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| ||||||| || ||||| |||||||||  || ||||||||||||| | |||||||||| ||||||||    
T  18037243 aatgctagatatcaacaatgattt-atcaagaaagatttaagaatgacatggtacaataatcacccttagattt 18037171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 119; Significance: 7e-61; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 118 - 252
Target Start/End: Original strand, 41011 - 41145
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||    
T  41011 gagcaatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaat 41110  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||||||||||||||||||||||||||||||    
T  41111 taatgttagccaataaaatctcagcctggccggaa 41145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 41276 - 41204
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||  | ||||||||| |||| | |||||||||||||||||||    
T  41276 aatgctagatatcaagaatgattttat-aagaaagatccaagaatgatatggtacaataatcacctttagattt 41204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 119; Significance: 7e-61; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 118 - 252
Target Start/End: Original strand, 47850 - 47984
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  47850 gagcaatgctatttatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaat 47949  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||| ||||||||||||||||||||||||||    
T  47950 taatgttaaccaataaaatctcagcctggccggaa 47984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 48115 - 48043
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||  |||||||||||||| ||| |||||||| ||||||||||    
T  48115 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatagcacaataatcatctttagattt 48043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 119; Significance: 7e-61; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 118 - 252
Target Start/End: Original strand, 2754717 - 2754851
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  2754717 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacctttagattttatcaagaaatagtcctgaaat 2754816  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||| ||||||||||||||||||| ||||||    
T  2754817 taatgttaaccaataaaatctcagcctgaccggaa 2754851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 118 - 252
Target Start/End: Original strand, 6041884 - 6042018
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||    
T  6041884 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaat 6041983  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||||||||||||||||||||||| ||||||    
T  6041984 taatgttagccaataaaatctcagcctgaccggaa 6042018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 118 - 252
Target Start/End: Complemental strand, 3137479 - 3137345
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  3137479 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcaaaataatcacccttagattttatcaagaaatagtcctgaaat 3137380  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||| ||||||||||||||||||||||||||    
T  3137379 taatgttaaccaataaaatctcagcctggccggaa 3137345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 118 - 252
Target Start/End: Original strand, 30385011 - 30385145
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||    
T  30385011 gagcaatgctatttatcaagaaagattttatcaagaaaatttcaaaaatgacatggcagaataatcacccttatattttatcaagaaatagtcctgaaat 30385110  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||| ||||||||||||||||||||||||||    
T  30385111 taatgttaaccaataaaatctcagcctggccggaa 30385145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 118 - 252
Target Start/End: Original strand, 33113793 - 33113927
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  33113793 gagcaatgctatatatcaagaaagattttattaagaaaatttcaagaattacatggcagaataatcacccttagattttatcaagaaatagtcctgaaat 33113892  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    ||||||||||||||||||| |||| ||||||||||    
T  33113893 taatgttagccaataaaatttcagtctggccggaa 33113927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 118 - 252
Target Start/End: Original strand, 33145713 - 33145846
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  33145713 gagcaatgctatatatcaagaaagattttattaa-aaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaattgtcctgaaat 33145811  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||||||||||||||||||||||| ||||||    
T  33145812 taatgttagccaataaaatctcagcctgaccggaa 33145846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 118 - 252
Target Start/End: Complemental strand, 34482975 - 34482841
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||||| ||||||||||    
T  34482975 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggtagaataatcacccttagattttatcaagaaatagtcctgaaat 34482876  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||| ||||||||||||||||||||||||||    
T  34482875 taatgttaaccaataaaatctcagcctggccggaa 34482841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 118 - 252
Target Start/End: Complemental strand, 3574592 - 3574457
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctg-aaa 216  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||| || |||    
T  3574592 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaaa 3574493  T
Q  217 ttaatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||||||||||||||||||||| |||||||||    
T  3574492 ttaatgttagccaataaaatctcagcttggccggaa 3574457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 118 - 252
Target Start/End: Original strand, 3456064 - 3456198
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||| |||||| |||    
T  3456064 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgatatggcagaataatcacccttagattttatcaagaaatagtcctggaat 3456163  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||| ||||||||||||||| ||||||||||    
T  3456164 taatgttaaccaataaaatctcagtctggccggaa 3456198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 118 - 252
Target Start/End: Original strand, 48160905 - 48161039
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||| ||| ||||||    
T  48160905 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgatatggcagaataatcacccttagattttatcaagaaatagtcttgaaat 48161004  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||| |||||||||||||||||||||| |||||||    
T  48161005 taatattagccaataaaatctcagcctagccggaa 48161039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 118 - 241
Target Start/End: Original strand, 11347268 - 11347391
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||| ||||| ||||||||||    
T  11347268 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataataacccttagattttatcaggaaatagtcctgaaat 11347367  T
Q  218 taatgttagccaataaaatctcag 241  Q
    ||||||||||||||||||||||||    
T  11347368 taatgttagccaataaaatctcag 11347391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 118 - 252
Target Start/End: Original strand, 42297353 - 42297488
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggc-agaataatcacctttagattttatcaagaaattgtcctgaaa 216  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||| ||||||||||||||||||| || ||||||    
T  42297353 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatgactagaataatcacccttagattttatcaagaaatagttctgaaa 42297452  T
Q  217 ttaatgttagccaataaaatctcagcctggccggaa 252  Q
    ||||||||||||||||||||||||||||| ||||||    
T  42297453 ttaatgttagccaataaaatctcagcctgaccggaa 42297488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 118 - 244
Target Start/End: Complemental strand, 37217118 - 37216992
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||| ||| ||||||    
T  37217118 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttaaattttatcaagaaatagtcatgaaat 37217019  T
Q  218 taatgttagccaataaaatctcagcct 244  Q
    |||||||| ||||||||||||||||||    
T  37217018 taatgttaaccaataaaatctcagcct 37216992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 115 - 248
Target Start/End: Complemental strand, 8320652 - 8320519
Alignment:
Q  115 atggagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctga 214  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||| ||| ||||||||||||||| ||| |||    
T  8320652 atggagcaatgttatatatcaagaaagattttatcaagaaaattttaagaatgatatggcaaaataatcacccttaaattttatcaagaaatagtcttga 8320553  T
Q  215 aattaatgttagccaataaaatctcagcctggcc 248  Q
    ||||||||||||||||||||||||||||||||||    
T  8320552 aattaatgttagccaataaaatctcagcctggcc 8320519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 118 - 252
Target Start/End: Complemental strand, 22426409 - 22426275
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    |||||||| ||||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||    
T  22426409 gagcaatgttatatattaagaaagattttatcaagaaaattttaaaaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaat 22426310  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    ||||||||||||||||||| |||| ||||||||||    
T  22426309 taatgttagccaataaaatttcagtctggccggaa 22426275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 119 - 239
Target Start/End: Complemental strand, 9797093 - 9796973
Alignment:
Q  119 agcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaatt 218  Q
    ||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||    
T  9797093 agcaatgttatatatcaagaaagattttctcaagaaaaattcaagaatgacatggcagaataatcaccattagattttatcaagaaattgtacttaaatt 9796994  T
Q  219 aatgttagccaataaaatctc 239  Q
    |||||||||||||||||||||    
T  9796993 aatgttagccaataaaatctc 9796973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 117 - 252
Target Start/End: Complemental strand, 19650966 - 19650830
Alignment:
Q  117 ggagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctg-aa 215  Q
    ||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||  ||| || ||    
T  19650966 ggagcaatgttatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcaccattagattttatcaagaaacagtcttgaaa 19650867  T
Q  216 attaatgttagccaataaaatctcagcctggccggaa 252  Q
    ||||||||||||| ||||||||||||| |||||||||    
T  19650866 attaatgttagccgataaaatctcagcttggccggaa 19650830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 130 - 245
Target Start/End: Original strand, 47738117 - 47738232
Alignment:
Q  130 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaattaatgttagcca 229  Q
    ||||||||||||||||||||||||||  ||||||||||| ||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||    
T  47738117 atatcaagaaagattttatcaagaaatattcaagaatgatatggcagaataattacctttagattttataaaaaaattgtcctgaaattaatgttagcca 47738216  T
Q  230 ataaaatctcagcctg 245  Q
    ||||||||||||||||    
T  47738217 ataaaatctcagcctg 47738232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 118 - 252
Target Start/End: Complemental strand, 8362110 - 8361976
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||| |   | ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  8362110 gagcaatgctatatatcaagaaaaaaaatttcaagaaaaattcaagaatgacatggcagaataatcacccttagattttatcaagaaattgtactgaaat 8362011  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||||||||||||||||| | | ||||||||    
T  8362010 taatgttagccaataaaatctctgtcgggccggaa 8361976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 118 - 252
Target Start/End: Original strand, 37522053 - 37522187
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||| ||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||| | ||||||||| ||||||| ||| ||||||    
T  37522053 gagcaatactatatatcaagaaagattttttcaagaaaattttaagaatgacatgacagaataatcaccctaagattttataaagaaatagtcatgaaat 37522152  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||| |||||||||||||| |||||||||||    
T  37522153 taatgttaaccaataaaatctcaacctggccggaa 37522187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 129 - 244
Target Start/End: Original strand, 42921154 - 42921269
Alignment:
Q  129 tatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaattaatgttagcc 228  Q
    ||||||||||||||||||||||||||||||| |||||||||||| | |||| ||  ||||||||||||||||||||||||||||||| ||||||||||||    
T  42921154 tatatcaagaaagattttatcaagaaaattttaagaatgacatgaccgaatgattgcctttagattttatcaagaaattgtcctgaatttaatgttagcc 42921253  T
Q  229 aataaaatctcagcct 244  Q
    ||||||||||||||||    
T  42921254 aataaaatctcagcct 42921269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 118 - 245
Target Start/End: Original strand, 24343547 - 24343674
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    |||||||||||||||| |||||||||||||||||||||| ||||| | | | ||||||||||||||||  |||||||||||||||||||||| | |||||    
T  24343547 gagcaatgctatatattaagaaagattttatcaagaaaaattcaaaattaatatggcagaataatcactcttagattttatcaagaaattgttccgaaat 24343646  T
Q  218 taatgttagccaataaaatctcagcctg 245  Q
    ||||||||||||||||||||||| ||||    
T  24343647 taatgttagccaataaaatctcatcctg 24343674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 118 - 249
Target Start/End: Original strand, 33839531 - 33839662
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    |||||||| ||||||| ||||||||||||||||| |||| || |||||| ||||| ||||||||||||| ||||||||||||||||||||||  ||||||    
T  33839531 gagcaatgttatatattaagaaagattttatcaaaaaaaatttaagaataacatgacagaataatcaccattagattttatcaagaaattgttttgaaat 33839630  T
Q  218 taatgttagccaataaaatctcagcctggccg 249  Q
    |||||||||||||||||||||||  |||||||    
T  33839631 taatgttagccaataaaatctcaatctggccg 33839662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 118 - 241
Target Start/End: Complemental strand, 36865092 - 36864969
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    |||||||||||||||| ||| |||||||||| |||||||||| ||||||||||||| |||||||||||| |||| ||||||||| |||| ||||||||||    
T  36865092 gagcaatgctatatattaaggaagattttattaagaaaattttaagaatgacatggtagaataatcacccttaggttttatcaaaaaatagtcctgaaat 36864993  T
Q  218 taatgttagccaataaaatctcag 241  Q
    ||||||||||||||| ||||||||    
T  36864992 taatgttagccaatagaatctcag 36864969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 146 - 247
Target Start/End: Complemental strand, 41883260 - 41883159
Alignment:
Q  146 tatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaattaatgttagccaataaaatctcagcctg 245  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||| |||||||||||||| |||    
T  41883260 tatcaagaaaaattcaagaatgacatggcagaataatcacccttaaattttatcaagaaattgtcccgaaattaatgttagtcaataaaatctcagactg 41883161  T
Q  246 gc 247  Q
    ||    
T  41883160 gc 41883159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 156 - 252
Target Start/End: Original strand, 3089455 - 3089551
Alignment:
Q  156 atttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaattaatgttagccaataaaatctcagcctggccggaa 252  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||||  || ||||||||||||||||||||||||||||||| |||||||||    
T  3089455 attttaagaatgacatggcagaataatcacccttagattttatcaagaaatattcttgaaattaatgttagccaataaaatctcagcttggccggaa 3089551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 117 - 239
Target Start/End: Original strand, 41224232 - 41224354
Alignment:
Q  117 ggagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaa 216  Q
    |||||| |||||||||| |||||||||||| ||||||||| |||||||||||||||| ||||| |||||| ||  ||||||| ||||||||||  |||||    
T  41224232 ggagcactgctatatattaagaaagattttctcaagaaaaattcaagaatgacatggtagaattatcacccttgaattttattaagaaattgtattgaaa 41224331  T
Q  217 ttaatgttagccaataaaatctc 239  Q
    ||||||||||| |||||||||||    
T  41224332 ttaatgttagctaataaaatctc 41224354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 174 - 252
Target Start/End: Original strand, 42297920 - 42297998
Alignment:
Q  174 cagaataatcacctttagattttatcaagaaattgtcctgaaattaatgttagccaataaaatctcagcctggccggaa 252  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  42297920 cagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttagccaataaaatctcagtctggccggaa 42297998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 190 - 252
Target Start/End: Original strand, 40327897 - 40327959
Alignment:
Q  190 agattttatcaagaaattgtcctgaaattaatgttagccaataaaatctcagcctggccggaa 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  40327897 agattttatcaagaaattgtcctgaaattaatgttagccaataaaatctcaacctggccggaa 40327959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 118 - 223
Target Start/End: Original strand, 26612785 - 26612890
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    |||||||  |||||||||| ||||||||||| || |||| |||||||||||||||||||||||| ||  |||||||||||| || |||| ||||| ||||    
T  26612785 gagcaatattatatatcaaaaaagattttataaaaaaaaattcaagaatgacatggcagaataaccatttttagattttattaaaaaatagtccttaaat 26612884  T
Q  218 taatgt 223  Q
    ||||||    
T  26612885 taatgt 26612890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 3137213 - 3137285
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||||||||||||    
T  3137213 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 3137285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 34482687 - 34482759
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||||||||||||    
T  34482687 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 34482759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 30385666 - 30385594
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||  |||||||||||||||||| |||||||||||||||||||    
T  30385666 aatgctaaatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 30385594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 33114060 - 33113988
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||  |||||||||||||||||| |||||||||||||||||||    
T  33114060 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 33113988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 37522319 - 37522247
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||||||||||||    
T  37522319 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcataataatcacctttagattt 37522247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 40328098 - 40328025
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||||||||||  ||||||||||||||| || |||||||||| ||||||||    
T  40328098 aatgctagatatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatcacccttagattt 40328025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 46918959 - 46919020
Alignment:
Q  175 agaataatcacctttagattttatcaagaaattgtcctgaaattaatgttagccaataaaat 236  Q
    |||||||| |||||||||||||||||||||||||||  ||||||||||||||| ||||||||    
T  46918959 agaataattacctttagattttatcaagaaattgtctcgaaattaatgttagcaaataaaat 46919020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 6042143 - 6042071
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||  | |||||||||||||||| |||||||||||||||||||    
T  6042143 aatgctagatatcaagaatgattttat-aagaaagatccaagaatgacatggcacaataatcacctttagattt 6042071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 8320381 - 8320453
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| ||||||| || |||||||| ||||||  |||||||||||||||||| |||||||||||||||||||    
T  8320381 aatgctagatatcaataatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 8320453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 22426144 - 22426216
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||  |||||||||||||||||| ||||||||| |||||||||    
T  22426144 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacatttagattt 22426216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 36864831 - 36864904
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| ||||||||||| |||  ||||||||||||||| || |||||||||| ||||||||    
T  36864831 aatgctagatatcaagaatgattttatcaaaaaagattcaagaatgacatgacacaataatcacccttagattt 36864904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 37216852 - 37216924
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||  |||||||||||||||| | |||||||||||||||||||    
T  37216852 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggtacaataatcacctttagattt 37216924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 46919153 - 46919088
Alignment:
Q  130 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    |||||||||| ||||||||||| |||  ||||| |||||||||||||||||||||||| |||||||    
T  46919153 atatcaagaatgattttatcaaaaaagattcaataatgacatggcagaataatcacctctagattt 46919088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 47738370 - 47738305
Alignment:
Q  130 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    |||||||||| |||||||||||||||  |||||||||||||||||| |||||||| | ||||||||    
T  47738370 atatcaagaatgattttatcaagaaagattcaagaatgacatggcacaataatcatccttagattt 47738305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 195
Target Start/End: Complemental strand, 33839797 - 33839729
Alignment:
Q  127 tatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||||||||| |||||||||||||||  ||||||||||||||| || |||||||||| ||| ||||    
T  33839797 tatatatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatcacccttaaattt 33839729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 3089685 - 3089613
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||  |  ||||||||||||||| |||||||||||||||||||    
T  3089685 aatgctagatatcaagaatgattttat-aagaaagatctaagaatgacatggcacaataatcacctttagattt 3089613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 8361838 - 8361910
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| ||||| |||||||||  ||||||||||||||| || |||||||||| ||||||||    
T  8361838 aatgctagatatcaagaatgattt-atcaagaaatattcaagaatgacatgacacaataatcacccttagattt 8361910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 19650699 - 19650771
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||  | ||||||||||||| || |||||||||||||||||||    
T  19650699 aatgctagatatcaagaatgattttat-aagaaagatccaagaatgacatgacacaataatcacctttagattt 19650771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 33145978 - 33145906
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||||||| || |||||||||| ||||||||    
T  33145978 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatgacacaataatcacccttagattt 33145906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 41224500 - 41224428
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| ||||| |||||||||  |||||||||||||||||| |||||||||| ||| ||||    
T  41224500 aatgctagatatcaagaatgattt-atcaagaaatattcaagaatgacatggcacaataatcacccttaaattt 41224428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 121 - 155
Target Start/End: Original strand, 40327878 - 40327912
Alignment:
Q  121 caatgctatatatcaagaaagattttatcaagaaa 155  Q
    |||||||||||||||||||||||||||||||||||    
T  40327878 caatgctatatatcaagaaagattttatcaagaaa 40327912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 2754985 - 2754913
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| ||||||||||  ||||||| ||||||  || ||||||||||||||| |||||||||||||| ||||    
T  2754985 aatgctagatatcaagaatcattttat-aagaaagatttaagaatgacatggcacaataatcacctttaaattt 2754913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 3456330 - 3456258
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||||||| || | |||||| ||||||||||    
T  3456330 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatgacacactaatcatctttagattt 3456258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 3574325 - 3574397
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||  | ||||||||||||| || ||||||||||| |||||||    
T  3574325 aatgctagatatcaagaatgattttat-aagaaagatccaagaatgacatgacacaataatcacctctagattt 3574397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 9796828 - 9796900
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| ||||| |||||||||  ||||||||||||||| || |||||||||  ||||||||    
T  9796828 aatgctagatatcaagaatgattt-atcaagaaagattcaagaatgacatgtcacaataatcactcttagattt 9796900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 42921392 - 42921319
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||| ||||| |||||||||||||||  || ||||||||||||||| || ||||||| ||| ||||    
T  42921392 aatgctagatattaagaatgattttatcaagaaatatttaagaatgacatggcacaacaatcacccttaaattt 42921319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 48161172 - 48161100
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||  | |||||| |||||| || |||||||||||||||||||    
T  48161172 aatgctagatatcaagaatgattttat-aagaaatatccaagaacgacatgacacaataatcacctttagattt 48161100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 149
Target Start/End: Complemental strand, 47402661 - 47402630
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatc 149  Q
    ||||||||||||||||||||||||||||||||    
T  47402661 gagcaatgctatatatcaagaaagattttatc 47402630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 24343808 - 24343743
Alignment:
Q  130 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    |||||||||| ||||||||||| |||  |||||||||||||||  |  ||||||||| ||||||||    
T  24343808 atatcaagaatgattttatcaaaaaagattcaagaatgacatgatatgataatcacccttagattt 24343743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 115; Significance: 2e-58; HSPs: 2)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 118 - 252
Target Start/End: Original strand, 12842 - 12976
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||    
T  12842 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcatccttagattttatcaagaaatagtcctgaaat 12941  T
Q  218 taatgttagccaataaaatctcagcctggccggaa 252  Q
    |||||||| ||||||||||||||||||||||||||    
T  12942 taatgttaaccaataaaatctcagcctggccggaa 12976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 13108 - 13036
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||| || |||||||||||| || |||||| ||||||||||||    
T  13108 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatgacacaataattacctttagattt 13036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 114; Significance: 6e-58; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 108 - 249
Target Start/End: Original strand, 11611 - 11752
Alignment:
Q  108 aaataaaatggagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaatt 207  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||     
T  11611 aaatataattgagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatcacccttagattttatcaagaaata 11710  T
Q  208 gtcctgaaattaatgttagccaataaaatctcagcctggccg 249  Q
    ||| |||||||||||||| |||||||||||||||||||||||    
T  11711 gtcatgaaattaatgttaaccaataaaatctcagcctggccg 11752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 11879 - 11815
Alignment:
Q  130 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||||||||||||    
T  11879 atatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacctttagattt 11815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 112; Significance: 1e-56; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 118 - 249
Target Start/End: Original strand, 4396 - 4527
Alignment:
Q  118 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaat 217  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  4396 gagcaatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaat 4495  T
Q  218 taatgttagccaataaaatctcagcctggccg 249  Q
    |||||||| |||||||||||||||||||||||    
T  4496 taatgttaaccaataaaatctcagcctggccg 4527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 4662 - 4590
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||| || |||||||| |||||| |||||||||||||||||||    
T  4662 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgatatggcacaataatcacctttagattt 4590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 119 - 243
Target Start/End: Original strand, 3069 - 3193
Alignment:
Q  119 agcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaatt 218  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||    
T  3069 agcaatgctatatatcaagaaagattttatcaataaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaatt 3168  T
Q  219 aatgttagccaataaaatctcagcc 243  Q
    |||||||||||||||||||||||||    
T  3169 aatgttagccaataaaatctcagcc 3193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 104; Significance: 6e-52; HSPs: 5)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 129 - 252
Target Start/End: Original strand, 8413 - 8536
Alignment:
Q  129 tatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaattaatgttagcc 228  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||| ||    
T  8413 tatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagttctgaaattaatgttaacc 8512  T
Q  229 aataaaatctcagcctggccggaa 252  Q
    ||||||||||||| ||||||||||    
T  8513 aataaaatctcaggctggccggaa 8536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 129 - 252
Target Start/End: Original strand, 15995 - 16118
Alignment:
Q  129 tatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaattaatgttagcc 228  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||| ||    
T  15995 tatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagttctgaaattaatgttaacc 16094  T
Q  229 aataaaatctcagcctggccggaa 252  Q
    ||||||||||||| ||||||||||    
T  16095 aataaaatctcaggctggccggaa 16118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 129 - 252
Target Start/End: Original strand, 25947 - 26070
Alignment:
Q  129 tatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaattaatgttagcc 228  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||| ||    
T  25947 tatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagttctgaaattaatgttaacc 26046  T
Q  229 aataaaatctcagcctggccggaa 252  Q
    ||||||||||||| ||||||||||    
T  26047 aataaaatctcaggctggccggaa 26070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 26202 - 26130
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||||||||||||    
T  26202 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 26130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 16250 - 16178
Alignment:
Q  122 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattt 195  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||| ||||||||||    
T  16250 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcatctttagattt 16178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 144 - 246
Target Start/End: Original strand, 85452 - 85554
Alignment:
Q  144 tttatcaagaaaatttcaagaatgacatggcagaataatcacctttagattttatcaagaaattgtcctgaaattaatgttagccaataaaatctcagcc 243  Q
    |||||||||||||  |||||||||||||||||||||||||| | ||| ||||||| |||||||| |||||||||||||||||||||||||||||| ||||    
T  85452 tttatcaagaaaaactcaagaatgacatggcagaataatcatccttaaattttatgaagaaattatcctgaaattaatgttagccaataaaatcttagcc 85551  T
Q  244 tgg 246  Q
    |||    
T  85552 tgg 85554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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