View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0305_low_21 (Length: 252)

Name: NF0305_low_21
Description: NF0305
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0305_low_21
NF0305_low_21
[»] chr6 (45 HSPs)
chr6 (1-159)||(30729096-30729254)
chr6 (15-163)||(1072141-1072289)
chr6 (1-163)||(8995368-8995529)
chr6 (1-163)||(9019815-9019976)
chr6 (1-153)||(11983303-11983455)
chr6 (1-163)||(19227672-19227835)
chr6 (1-163)||(14507439-14507601)
chr6 (15-157)||(32279899-32280040)
chr6 (15-163)||(15541404-15541552)
chr6 (15-165)||(15530384-15530534)
chr6 (23-163)||(15532945-15533085)
chr6 (89-166)||(17852518-17852595)
chr6 (88-164)||(15346366-15346442)
chr6 (92-163)||(13057173-13057244)
chr6 (92-163)||(24338712-24338783)
chr6 (92-163)||(32447580-32447651)
chr6 (89-163)||(12195779-12195853)
chr6 (43-163)||(25466434-25466554)
chr6 (88-163)||(3390354-3390429)
chr6 (92-163)||(13039733-13039804)
chr6 (92-163)||(25477253-25477324)
chr6 (90-163)||(1230513-1230586)
chr6 (90-163)||(28241585-28241658)
chr6 (92-155)||(3234003-3234065)
chr6 (51-134)||(16455717-16455800)
chr6 (94-163)||(3632202-3632271)
chr6 (65-134)||(4816538-4816607)
chr6 (66-163)||(12186331-12186431)
chr6 (99-163)||(14459029-14459093)
chr6 (65-121)||(20915664-20915720)
chr6 (92-163)||(14466312-14466383)
chr6 (88-134)||(3028143-3028189)
chr6 (88-130)||(11138278-11138320)
chr6 (92-157)||(22490618-22490683)
chr6 (15-92)||(24192630-24192707)
chr6 (65-134)||(26068592-26068661)
chr6 (92-152)||(3630139-3630199)
chr6 (66-134)||(26066321-26066389)
chr6 (92-163)||(12161819-12161889)
chr6 (98-149)||(17012029-17012080)
chr6 (66-144)||(12937478-12937559)
chr6 (22-92)||(24191533-24191603)
chr6 (92-140)||(10584105-10584153)
chr6 (99-163)||(13870686-13870749)
chr6 (89-121)||(30034913-30034945)
[»] chr4 (74 HSPs)
chr4 (1-165)||(48486226-48486390)
chr4 (15-163)||(47274648-47274796)
chr4 (1-165)||(22802996-22803159)
chr4 (15-166)||(22801123-22801273)
chr4 (1-163)||(5198327-5198489)
chr4 (1-163)||(36919849-36920013)
chr4 (1-157)||(619717-619873)
chr4 (1-163)||(40091679-40091841)
chr4 (1-163)||(51015153-51015315)
chr4 (1-134)||(36921788-36921921)
chr4 (15-163)||(11434876-11435024)
chr4 (15-163)||(24878910-24879058)
chr4 (15-163)||(24880372-24880520)
chr4 (1-163)||(31849863-31850025)
chr4 (1-163)||(52942710-52942873)
chr4 (15-163)||(24888717-24888865)
chr4 (2-125)||(3824875-3824998)
chr4 (1-134)||(38409106-38409239)
chr4 (1-165)||(37089633-37089800)
chr4 (14-163)||(7941239-7941390)
chr4 (1-163)||(9174410-9174572)
chr4 (15-163)||(22044654-22044801)
chr4 (24-163)||(8756513-8756653)
chr4 (15-163)||(22046949-22047096)
chr4 (15-134)||(5637762-5637880)
chr4 (32-163)||(9148190-9148322)
chr4 (1-122)||(11006546-11006667)
chr4 (48-163)||(36378246-36378361)
chr4 (92-166)||(19095880-19095954)
chr4 (98-163)||(19322701-19322766)
chr4 (92-163)||(18537734-18537806)
chr4 (92-163)||(24446843-24446914)
chr4 (65-163)||(16934407-16934505)
chr4 (65-163)||(18847124-18847222)
chr4 (93-163)||(37313330-37313400)
chr4 (89-166)||(5100992-5101069)
chr4 (93-166)||(56030443-56030516)
chr4 (41-134)||(25357583-25357677)
chr4 (66-142)||(40999232-40999308)
chr4 (68-163)||(44600102-44600198)
chr4 (92-163)||(3937473-3937543)
chr4 (88-163)||(15032800-15032875)
chr4 (65-163)||(9176738-9176836)
chr4 (65-163)||(16932053-16932151)
chr4 (93-163)||(33415751-33415821)
chr4 (90-163)||(6764835-6764908)
chr4 (90-163)||(14633316-14633388)
chr4 (90-163)||(40637070-40637143)
chr4 (90-163)||(47868397-47868470)
chr4 (88-163)||(16186100-16186176)
chr4 (48-163)||(38928442-38928557)
chr4 (89-165)||(14787693-14787771)
chr4 (92-163)||(38270250-38270321)
chr4 (90-163)||(2485136-2485210)
chr4 (1-87)||(9176836-9176922)
chr4 (1-87)||(11008932-11009018)
chr4 (96-154)||(41997494-41997552)
chr4 (92-163)||(12102088-12102161)
chr4 (89-163)||(17662498-17662576)
chr4 (66-134)||(52043722-52043791)
chr4 (92-163)||(2891314-2891386)
chr4 (65-121)||(11008876-11008932)
chr4 (92-163)||(18409611-18409681)
chr4 (48-134)||(36380328-36380414)
chr4 (1-87)||(18847038-18847124)
chr4 (93-166)||(13543953-13544031)
chr4 (92-155)||(12396117-12396180)
chr4 (92-155)||(12401079-12401142)
chr4 (90-157)||(16453305-16453372)
chr4 (88-142)||(28453681-28453736)
chr4 (89-163)||(53405122-53405199)
chr4 (92-150)||(18535106-18535164)
chr4 (89-134)||(22132692-22132737)
chr4 (89-134)||(47211039-47211084)
[»] chr1 (70 HSPs)
chr1 (1-163)||(28207332-28207494)
chr1 (15-163)||(13214948-13215096)
chr1 (1-166)||(10400091-10400256)
chr1 (15-163)||(41646787-41646935)
chr1 (15-163)||(51752232-51752380)
chr1 (17-163)||(13761706-13761852)
chr1 (15-157)||(47451515-47451657)
chr1 (1-163)||(51749892-51750054)
chr1 (1-163)||(6823737-6823900)
chr1 (15-154)||(38925753-38925892)
chr1 (1-163)||(15823399-15823561)
chr1 (1-163)||(20302312-20302474)
chr1 (15-163)||(6822882-6823030)
chr1 (1-150)||(30790673-30790822)
chr1 (15-163)||(39462385-39462534)
chr1 (18-153)||(14098246-14098380)
chr1 (15-134)||(28840545-28840664)
chr1 (15-157)||(3579888-3580032)
chr1 (15-104)||(49687407-49687496)
chr1 (15-163)||(28842360-28842510)
chr1 (92-165)||(14183850-14183923)
chr1 (41-163)||(42922126-42922249)
chr1 (65-163)||(16231518-16231616)
chr1 (88-157)||(49495471-49495540)
chr1 (88-163)||(18800835-18800910)
chr1 (93-163)||(17318838-17318908)
chr1 (93-163)||(25251541-25251611)
chr1 (89-166)||(2949494-2949571)
chr1 (66-163)||(16226085-16226182)
chr1 (89-166)||(28998516-28998593)
chr1 (89-166)||(29004232-29004309)
chr1 (67-163)||(50079087-50079184)
chr1 (88-163)||(8349314-8349390)
chr1 (92-163)||(11457741-11457812)
chr1 (92-163)||(17186394-17186465)
chr1 (88-163)||(31423140-31423215)
chr1 (92-155)||(50076946-50077009)
chr1 (93-163)||(18307054-18307124)
chr1 (93-163)||(25248780-25248850)
chr1 (92-157)||(17324009-17324074)
chr1 (83-163)||(16428588-16428668)
chr1 (88-132)||(43104099-43104143)
chr1 (92-163)||(2617460-2617531)
chr1 (92-163)||(31489859-31489930)
chr1 (89-163)||(6995966-6996040)
chr1 (90-163)||(8347535-8347608)
chr1 (81-163)||(20291390-20291472)
chr1 (48-155)||(9241359-9241467)
chr1 (90-163)||(12302771-12302849)
chr1 (64-140)||(16431016-16431093)
chr1 (92-153)||(50248848-50248909)
chr1 (89-165)||(17324900-17324976)
chr1 (66-163)||(47177276-47177377)
chr1 (66-163)||(47179627-47179728)
chr1 (66-132)||(155618-155685)
chr1 (89-140)||(48665112-48665163)
chr1 (92-162)||(18839531-18839601)
chr1 (48-156)||(6756427-6756535)
chr1 (89-134)||(24325597-24325642)
chr1 (66-163)||(26613503-26613603)
chr1 (89-157)||(2510596-2510668)
chr1 (89-165)||(47906205-47906287)
chr1 (98-140)||(26520407-26520449)
chr1 (89-134)||(9459718-9459763)
chr1 (89-134)||(9463545-9463590)
chr1 (89-163)||(31735787-31735865)
chr1 (89-134)||(46432023-46432068)
chr1 (94-134)||(15295143-15295183)
chr1 (94-163)||(21948453-21948526)
chr1 (94-163)||(39932017-39932088)
[»] scaffold0339 (1 HSPs)
scaffold0339 (15-163)||(3873-4021)
[»] scaffold0250 (1 HSPs)
scaffold0250 (15-163)||(2756-2904)
[»] chr7 (61 HSPs)
chr7 (15-163)||(27306493-27306641)
chr7 (1-163)||(44427-44589)
chr7 (1-157)||(35492-35648)
chr7 (15-163)||(1049559-1049707)
chr7 (1-163)||(18567476-18567638)
chr7 (1-163)||(31435311-31435473)
chr7 (15-163)||(26804451-26804594)
chr7 (1-163)||(3878435-3878602)
chr7 (1-157)||(22392336-22392492)
chr7 (15-163)||(25542407-25542555)
chr7 (41-163)||(7188445-7188568)
chr7 (15-163)||(40837006-40837155)
chr7 (89-166)||(42331260-42331337)
chr7 (89-165)||(13099738-13099814)
chr7 (75-163)||(22251806-22251894)
chr7 (92-163)||(21678020-21678091)
chr7 (93-166)||(21990106-21990178)
chr7 (43-163)||(22828897-22829018)
chr7 (48-163)||(11355168-11355283)
chr7 (43-150)||(20091818-20091926)
chr7 (48-163)||(20137373-20137488)
chr7 (68-163)||(31156175-31156271)
chr7 (93-165)||(37412390-37412462)
chr7 (92-166)||(4296196-4296271)
chr7 (92-163)||(21679981-21680052)
chr7 (98-163)||(24258423-24258488)
chr7 (89-165)||(443546-443622)
chr7 (93-157)||(3677235-3677298)
chr7 (38-118)||(45366446-45366526)
chr7 (93-163)||(24465503-24465574)
chr7 (92-163)||(44724533-44724604)
chr7 (94-163)||(24817613-24817682)
chr7 (88-150)||(30906327-30906389)
chr7 (92-162)||(39146252-39146322)
chr7 (92-165)||(42223110-42223184)
chr7 (43-122)||(6067497-6067576)
chr7 (92-163)||(24748548-24748619)
chr7 (88-157)||(6332176-6332245)
chr7 (89-163)||(3035668-3035746)
chr7 (93-166)||(9679009-9679087)
chr7 (89-163)||(38393933-38394011)
chr7 (89-141)||(1606421-1606473)
chr7 (94-163)||(7470286-7470359)
chr7 (94-163)||(7472244-7472317)
chr7 (94-166)||(7092436-7092512)
chr7 (92-163)||(9680768-9680844)
chr7 (94-165)||(7094684-7094759)
chr7 (89-156)||(11757175-11757246)
chr7 (89-156)||(20299405-20299476)
chr7 (92-157)||(27832903-27832969)
chr7 (89-134)||(7349572-7349617)
chr7 (65-134)||(22108088-22108157)
chr7 (65-134)||(22137099-22137168)
chr7 (89-134)||(28485513-28485558)
chr7 (65-134)||(40549848-40549917)
chr7 (65-134)||(40552126-40552195)
chr7 (15-108)||(42006444-42006535)
chr7 (89-134)||(43253817-43253862)
chr7 (89-121)||(18345488-18345520)
chr7 (89-121)||(38396237-38396269)
chr7 (90-163)||(48457601-48457678)
[»] chr5 (59 HSPs)
chr5 (15-166)||(36402589-36402739)
chr5 (15-163)||(25921737-25921885)
chr5 (15-166)||(12556184-12556335)
chr5 (32-163)||(2818600-2818731)
chr5 (16-163)||(20507726-20507873)
chr5 (1-163)||(38881958-38882121)
chr5 (15-163)||(21947897-21948041)
chr5 (15-163)||(6756361-6756509)
chr5 (1-157)||(16776010-16776167)
chr5 (16-153)||(31466252-31466389)
chr5 (15-163)||(2174786-2174934)
chr5 (15-163)||(4236497-4236644)
chr5 (16-128)||(39797956-39798068)
chr5 (1-134)||(21684754-21684887)
chr5 (65-163)||(31542652-31542750)
chr5 (89-160)||(18596588-18596659)
chr5 (89-164)||(41585969-41586044)
chr5 (97-163)||(6661446-6661512)
chr5 (65-163)||(31544997-31545095)
chr5 (89-165)||(26098513-26098589)
chr5 (92-163)||(36208524-36208596)
chr5 (92-163)||(17072827-17072898)
chr5 (92-163)||(25904047-25904118)
chr5 (90-165)||(40221464-40221539)
chr5 (89-165)||(26097674-26097750)
chr5 (43-134)||(2144884-2144978)
chr5 (90-163)||(10529363-10529436)
chr5 (90-163)||(39854426-39854498)
chr5 (43-163)||(34530930-34531050)
chr5 (65-163)||(31179635-31179733)
chr5 (94-166)||(18509579-18509652)
chr5 (92-157)||(20044954-20045019)
chr5 (90-163)||(37706044-37706117)
chr5 (95-155)||(10474595-10474655)
chr5 (65-121)||(34477378-34477434)
chr5 (94-166)||(18511473-18511547)
chr5 (92-163)||(20042994-20043065)
chr5 (92-163)||(24126800-24126871)
chr5 (67-122)||(29748260-29748315)
chr5 (92-163)||(31472877-31472948)
chr5 (89-165)||(10586780-10586859)
chr5 (99-164)||(21288715-21288780)
chr5 (92-140)||(2723911-2723959)
chr5 (90-163)||(4409999-4410076)
chr5 (65-121)||(34479739-34479795)
chr5 (48-150)||(42770672-42770775)
chr5 (92-163)||(695833-695904)
chr5 (92-134)||(1189906-1189949)
chr5 (92-163)||(39398257-39398327)
chr5 (43-105)||(25837914-25837976)
chr5 (89-134)||(3373334-3373379)
chr5 (89-134)||(15552176-15552221)
chr5 (90-163)||(17818754-17818826)
chr5 (93-163)||(18466625-18466699)
chr5 (65-134)||(23665055-23665124)
chr5 (65-134)||(23793463-23793532)
chr5 (89-134)||(27910386-27910431)
chr5 (89-134)||(27912471-27912516)
chr5 (89-121)||(25803957-25803989)
[»] chr3 (90 HSPs)
chr3 (1-163)||(3859361-3859523)
chr3 (1-165)||(10956287-10956451)
chr3 (15-163)||(11162997-11163145)
chr3 (15-163)||(32264301-32264453)
chr3 (1-163)||(22114567-22114729)
chr3 (15-163)||(5522877-5523025)
chr3 (1-163)||(1321274-1321436)
chr3 (1-165)||(10958583-10958747)
chr3 (15-163)||(11170251-11170399)
chr3 (15-163)||(45882786-45882934)
chr3 (15-155)||(48361940-48362080)
chr3 (19-163)||(18162515-18162658)
chr3 (1-150)||(24177112-24177261)
chr3 (15-163)||(24979554-24979702)
chr3 (15-157)||(32218942-32219084)
chr3 (1-165)||(18099430-18099594)
chr3 (55-165)||(15780747-15780857)
chr3 (32-165)||(18097160-18097294)
chr3 (15-163)||(5191500-5191648)
chr3 (15-163)||(26720395-26720543)
chr3 (15-163)||(35777269-35777416)
chr3 (15-134)||(10084684-10084803)
chr3 (15-134)||(10191604-10191723)
chr3 (50-163)||(12268228-12268341)
chr3 (41-155)||(23633332-23633447)
chr3 (89-155)||(1313331-1313397)
chr3 (15-163)||(6066058-6066206)
chr3 (98-163)||(6561740-6561805)
chr3 (88-157)||(53597161-53597229)
chr3 (89-166)||(53915755-53915832)
chr3 (92-163)||(1626945-1627016)
chr3 (92-163)||(3314608-3314679)
chr3 (92-163)||(5927026-5927097)
chr3 (88-163)||(28761690-28761765)
chr3 (92-165)||(890031-890104)
chr3 (90-163)||(4308543-4308616)
chr3 (65-163)||(6063708-6063808)
chr3 (89-166)||(53917923-53918000)
chr3 (93-165)||(27635887-27635959)
chr3 (15-87)||(38889864-38889936)
chr3 (41-163)||(23636899-23637022)
chr3 (92-163)||(28137557-28137628)
chr3 (92-163)||(47701857-47701928)
chr3 (89-163)||(51943292-51943366)
chr3 (92-165)||(880712-880785)
chr3 (65-134)||(6719402-6719471)
chr3 (65-118)||(38889936-38889989)
chr3 (90-163)||(51727268-51727341)
chr3 (92-165)||(53468715-53468788)
chr3 (15-87)||(6719471-6719543)
chr3 (92-163)||(28100303-28100374)
chr3 (92-163)||(43423725-43423796)
chr3 (93-163)||(3306724-3306794)
chr3 (65-123)||(5886182-5886240)
chr3 (65-123)||(5899657-5899715)
chr3 (93-155)||(6231374-6231436)
chr3 (90-156)||(6484307-6484373)
chr3 (92-150)||(28180948-28181006)
chr3 (93-163)||(43421677-43421747)
chr3 (65-163)||(50493896-50493994)
chr3 (93-163)||(51675017-51675087)
chr3 (89-163)||(455824-455902)
chr3 (89-163)||(458201-458279)
chr3 (88-157)||(13420440-13420509)
chr3 (90-163)||(35918211-35918284)
chr3 (90-163)||(43226008-43226081)
chr3 (65-121)||(25388795-25388851)
chr3 (90-162)||(39715392-39715463)
chr3 (65-120)||(13893290-13893345)
chr3 (92-163)||(28102264-28102335)
chr3 (92-155)||(36011751-36011814)
chr3 (92-163)||(53591119-53591190)
chr3 (1-87)||(5899572-5899657)
chr3 (89-163)||(4104157-4104235)
chr3 (92-163)||(31151271-31151344)
chr3 (90-163)||(43228213-43228286)
chr3 (65-122)||(46966938-46966995)
chr3 (65-146)||(53896475-53896556)
chr3 (43-122)||(26762839-26762919)
chr3 (65-121)||(38210265-38210321)
chr3 (88-142)||(1673895-1673950)
chr3 (88-134)||(1618949-1618995)
chr3 (43-127)||(562060-562144)
chr3 (89-134)||(746672-746717)
chr3 (88-153)||(4560537-4560602)
chr3 (92-129)||(4663843-4663880)
chr3 (89-134)||(10621833-10621878)
chr3 (89-134)||(11007966-11008011)
chr3 (89-134)||(25533355-25533400)
chr3 (92-140)||(54691858-54691906)
[»] chr2 (44 HSPs)
chr2 (20-163)||(40032322-40032465)
chr2 (1-163)||(22407673-22407835)
chr2 (1-163)||(24162476-24162638)
chr2 (1-163)||(21520957-21521121)
chr2 (15-157)||(27104642-27104784)
chr2 (15-163)||(6264409-6264557)
chr2 (1-163)||(13910308-13910470)
chr2 (1-163)||(42064344-42064506)
chr2 (15-163)||(22287600-22287748)
chr2 (15-163)||(43623832-43623979)
chr2 (1-163)||(19504609-19504771)
chr2 (1-163)||(6259079-6259241)
chr2 (1-163)||(19502275-19502437)
chr2 (15-163)||(18800566-18800713)
chr2 (37-142)||(35107165-35107270)
chr2 (40-153)||(12342684-12342797)
chr2 (88-163)||(37963191-37963266)
chr2 (48-163)||(11578368-11578485)
chr2 (48-163)||(22874018-22874133)
chr2 (92-163)||(17849037-17849108)
chr2 (92-163)||(19007560-19007631)
chr2 (92-163)||(31733029-31733100)
chr2 (93-166)||(15539736-15539809)
chr2 (90-163)||(45280249-45280322)
chr2 (92-163)||(11739824-11739895)
chr2 (92-155)||(22163219-22163282)
chr2 (89-165)||(42923771-42923849)
chr2 (95-157)||(3022086-3022148)
chr2 (88-134)||(40699226-40699272)
chr2 (89-163)||(42452700-42452774)
chr2 (92-157)||(14837193-14837258)
chr2 (65-122)||(28462591-28462648)
chr2 (66-142)||(35028473-35028550)
chr2 (48-163)||(28196513-28196628)
chr2 (88-142)||(17897526-17897581)
chr2 (93-134)||(20147041-20147082)
chr2 (43-120)||(45156922-45156999)
chr2 (88-131)||(20146903-20146946)
chr2 (100-163)||(34979843-34979906)
chr2 (92-134)||(20589581-20589623)
chr2 (93-163)||(38020064-38020134)
chr2 (89-134)||(23452534-23452579)
chr2 (89-134)||(35215889-35215934)
chr2 (66-134)||(13828633-13828701)
[»] chr8 (47 HSPs)
chr8 (1-163)||(15072619-15072781)
chr8 (1-163)||(14807661-14807822)
chr8 (1-163)||(15067890-15068052)
chr8 (15-165)||(28251829-28251978)
chr8 (15-163)||(27826909-27827057)
chr8 (15-163)||(27829220-27829368)
chr8 (15-155)||(4423941-4424081)
chr8 (15-155)||(2468370-2468510)
chr8 (15-163)||(3886182-3886333)
chr8 (15-163)||(12517288-12517438)
chr8 (65-163)||(18810681-18810779)
chr8 (65-163)||(18812866-18812964)
chr8 (44-163)||(13858748-13858868)
chr8 (88-163)||(14419455-14419530)
chr8 (65-163)||(44720816-44720914)
chr8 (89-166)||(41382670-41382747)
chr8 (92-163)||(5623002-5623073)
chr8 (92-163)||(35872642-35872713)
chr8 (48-163)||(1225122-1225237)
chr8 (43-163)||(15185974-15186095)
chr8 (90-163)||(26775199-26775272)
chr8 (89-165)||(181534-181610)
chr8 (92-163)||(21482322-21482393)
chr8 (92-163)||(27107161-27107232)
chr8 (92-163)||(33541652-33541723)
chr8 (65-122)||(17847501-17847558)
chr8 (89-166)||(41384742-41384818)
chr8 (92-163)||(14477276-14477347)
chr8 (92-163)||(25952521-25952592)
chr8 (88-163)||(27911011-27911086)
chr8 (88-163)||(27957430-27957505)
chr8 (93-163)||(36865538-36865609)
chr8 (88-134)||(6375985-6376031)
chr8 (88-134)||(31162209-31162255)
chr8 (1-87)||(44720731-44720816)
chr8 (89-163)||(43530121-43530199)
chr8 (51-134)||(31035027-31035110)
chr8 (92-163)||(5372442-5372512)
chr8 (92-163)||(30480767-30480838)
chr8 (89-163)||(32339302-32339380)
chr8 (90-142)||(14419782-14419834)
chr8 (89-165)||(28283481-28283563)
chr8 (89-134)||(15809212-15809257)
chr8 (89-134)||(24873480-24873525)
chr8 (90-134)||(22684959-22685003)
chr8 (123-163)||(37214474-37214514)
chr8 (65-121)||(43081931-43081987)
[»] scaffold0131 (1 HSPs)
scaffold0131 (1-153)||(14881-15033)
[»] scaffold0068 (1 HSPs)
scaffold0068 (1-134)||(29023-29156)
[»] scaffold0025 (2 HSPs)
scaffold0025 (18-163)||(69555-69703)
scaffold0025 (15-163)||(73287-73438)
[»] scaffold0224 (1 HSPs)
scaffold0224 (41-163)||(16082-16205)
[»] scaffold0004 (1 HSPs)
scaffold0004 (48-163)||(79768-79883)
[»] scaffold0472 (1 HSPs)
scaffold0472 (65-163)||(6125-6223)
[»] scaffold0154 (1 HSPs)
scaffold0154 (89-166)||(11734-11811)
[»] scaffold0552 (1 HSPs)
scaffold0552 (66-163)||(1095-1194)
[»] scaffold0031 (1 HSPs)
scaffold0031 (89-163)||(79135-79209)
[»] scaffold0038 (1 HSPs)
scaffold0038 (90-163)||(41747-41820)
[»] scaffold0005 (2 HSPs)
scaffold0005 (90-163)||(183904-183976)
scaffold0005 (89-165)||(51959-52037)
[»] scaffold0057 (1 HSPs)
scaffold0057 (53-150)||(16924-17021)
[»] scaffold0133 (1 HSPs)
scaffold0133 (98-150)||(4773-4825)
[»] scaffold0468 (1 HSPs)
scaffold0468 (101-163)||(1895-1958)


Alignment Details
Target: chr6 (Bit Score: 123; Significance: 3e-63; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 30729254 - 30729096
Alignment:
Q  1 gatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttacta 100  Q
    ||||||||||||| |||||||||| ||||| ||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||| |||||||||||    
T  30729254 gatggggtcacaacgtggcacgatagtgcgctggcagcgaataacagaaacgtatttttgggtgcagatttgttccaaattttaagcggtacttttacta 30729155  T
Q  101 taaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtat 159  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  30729154 taaatatagatcttgtatcagagtaaaccttgagatagagggggctgaaacaagggtat 30729096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 15 - 163
Target Start/End: Complemental strand, 1072289 - 1072141
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatctt 114  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||  ||    
T  1072289 gtggcacgatggtacgtaggcagcgaataacataaacgtatttttgggtgcagatttgttccaaattttaagcaatacttttactataaatatagacatt 1072190  T
Q  115 gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||||| ||||| ||||  | |||||||||||||| |||||    
T  1072189 gtatcagagtaaactttgagatagaaggagctgaaacaagggtttagaa 1072141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 8995368 - 8995529
Alignment:
Q  1 gatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttacta 100  Q
    ||||||||||||  |||||||||||||||| || |||| ||||||| ||||||||||| |||| |||||||||| |||||||||||||||||||||||||    
T  8995368 gatggggtcacatcgtggcacgatggtgcgctgacagcaaataacagaaacgtatttt-gggtgcagatttgttccaaattttaagcgatacttttacta 8995466  T
Q  101 taaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||||||||||||||||||||||||   ||| ||||| ||||| |||||||||| |||||    
T  8995467 taaatatagatcttgtatcagagtaaactgagagatagagggggctaaaacaagggtttagaa 8995529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 9019815 - 9019976
Alignment:
Q  1 gatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttacta 100  Q
    ||||||||||||  |||||||||||||||| || |||| ||||||| ||||||||||| |||| |||||||||| |||||||||||||||||||||||||    
T  9019815 gatggggtcacatcgtggcacgatggtgcgctgacagcaaataacagaaacgtatttt-gggtgcagatttgttccaaattttaagcgatacttttacta 9019913  T
Q  101 taaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||||||||||||||||||||||||   ||| ||||| ||||| |||||||||| |||||    
T  9019914 taaatatagatcttgtatcagagtaaactgagagatagagggggctaaaacaagggtttagaa 9019976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 11983455 - 11983303
Alignment:
Q  1 gatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttacta 100  Q
    ||||||||| ||  |||||||||||||||| |||||||||| |||| |||| |||||||| || ||||||||||||||||||||| ||| ||||||||||    
T  11983455 gatggggtcgcatcgtggcacgatggtgcgctggcagcgaaaaacagaaacatatttttgagtgcagatttgtttcaaattttaaacgaaacttttacta 11983356  T
Q  101 taaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaa 153  Q
    |||||||||| |||||||||||| |||| | ||| ||||| ||||||||||||    
T  11983355 taaatatagaccttgtatcagagcaaacttggagatagagggggctgaaacaa 11983303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 19227835 - 19227672
Alignment:
Q  1 gatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtattttt-gggtccagatttgtttcaaattttaagcgatacttttact 99  Q
    ||||||||| ||  |||||||||||||||| |||| |||||||||| |||| ||||||| |||| |||||||||| ||||||||||| || |||||||||    
T  19227835 gatggggtcgcatcgtggcacgatggtgcgctggcggcgaataacagaaacatattttttgggtgcagatttgttccaaattttaagggaaacttttact 19227736  T
Q  100 ataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||||||||||||||| |||| ||||| || || ||||| |||||||||| |||||    
T  19227735 ataaatatagatcttgtatcagagcaaactttgagataaagggggctcaaacaagggtttagaa 19227672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 14507601 - 14507439
Alignment:
Q  1 gatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttacta 100  Q
    ||||||||| ||  |||||||||||||||| || ||||||| |||| |||| |||||||| ||  ||||||||| |||||||||||||||||||||||||    
T  14507601 gatggggtcgcatcgtggcacgatggtgcgctgccagcgaaaaacagaaacatatttttgagtgtagatttgttccaaattttaagcgatacttttacta 14507502  T
Q  101 taaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||| ||||||| |||| |||| ||||| ||||| ||||| |||||||||| |||||    
T  14507501 taaatatagaccttgtattagagcaaactttgagatagagggggctaaaacaagggtttagaa 14507439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 15 - 157
Target Start/End: Original strand, 32279899 - 32280040
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatctt 114  Q
    |||||||||||||||| |||| |||||||||||||| ||||||||| || |||||||||| ||||||||||||||||||||| ||||| ||||||| |||    
T  32279899 gtggcacgatggtgcgctggcggcgaataacataaatgtatttttgagtgcagatttgttccaaattttaagcgatacttttcctatatatatagacctt 32279998  T
Q  115 gtatcagagtaaaccttgagctagagagggctgaaacaagggt 157  Q
    |||||| ||||||| | ||| ||||| ||||||||||||||||    
T  32279999 gtatcatagtaaacttggagatagag-gggctgaaacaagggt 32280040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 15 - 163
Target Start/End: Complemental strand, 15541552 - 15541404
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatctt 114  Q
    ||||||||||||| || |||||||||||| || |||| ||||||| ||| |||||||||| |||||||||||  | |||||||||||||||||||| |||    
T  15541552 gtggcacgatggtacgctggcagcgaatagcagaaacatatttttaggtgcagatttgttccaaattttaagttacacttttactataaatatagacctt 15541453  T
Q  115 gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||| ||||| ||||| ||||| |||||||||||||||| |||||    
T  15541452 gtatcagactaaactttgagatagagggggctgaaacaagggtttagaa 15541404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 15 - 165
Target Start/End: Complemental strand, 15530534 - 15530384
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatctt 114  Q
    |||||||||||||| | |||||| |||| | | |||| ||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||||| |||    
T  15530534 gtggcacgatggtgtgctggcagtgaattatagaaacatatttttgggtgcaggtttgttccaaattttaagcgatacttttactataaatatagacctt 15530435  T
Q  115 gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatg 165  Q
    ||||||||||||||   ||| ||||| |||||||| ||||||  |||||||    
T  15530434 gtatcagagtaaactgggagatagagggggctgaagcaagggcttagaatg 15530384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 23 - 163
Target Start/End: Complemental strand, 15533085 - 15532945
Alignment:
Q  23 atggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcaga 122  Q
    |||||||| ||| ||| ||||| | |||| ||||||| ||| |||||||||| |||||||||||  |||||||||||||||||||||| |||||||||||    
T  15533085 atggtgcgctggtagcaaataagagaaacatatttttaggtgcagatttgttccaaattttaagttatacttttactataaatatagaccttgtatcaga 15532986  T
Q  123 gtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
     ||||| ||||| ||||| |||||||||||||||| |||||    
T  15532985 ctaaactttgagatagagggggctgaaacaagggtttagaa 15532945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 89 - 166
Target Start/End: Original strand, 17852518 - 17852595
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatga 166  Q
    ||||||||||||||||||||||  ||| |||||||||||||||||| ||||| |||||||||||||||| ||||||||    
T  17852518 atacttttactataaatatagactttgaatcagagtaaaccttgagatagagggggctgaaacaagggtttagaatga 17852595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 88 - 164
Target Start/End: Original strand, 15346366 - 15346442
Alignment:
Q  88 gatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaat 164  Q
    |||||||||||||||||||||||  ||||||||| |||||||||||| ||||| |||||||| ||||||| ||||||    
T  15346366 gatacttttactataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaccaagggtttagaat 15346442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 13057173 - 13057244
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||||||||||  ||||||||| |||||||||||| ||||| |||||||||||||||| |||||    
T  13057173 cttttactataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaa 13057244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 92 - 163
Target Start/End: Complemental strand, 24338783 - 24338712
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||||||||||  ||||||||| |||||||||||| ||||| |||||||||||||||| |||||    
T  24338783 cttttactataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaa 24338712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 92 - 163
Target Start/End: Complemental strand, 32447651 - 32447580
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||||||||||||||   |||||||||||||||||||||| ||||| |||||||||||||||| |||||    
T  32447651 cttttactataaatataggctttgtatcagagtaaaccttgagatagagggggctgaaacaagggtttagaa 32447580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 89 - 163
Target Start/End: Complemental strand, 12195853 - 12195779
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||||||||||||| ||||||||| || |||| ||||| ||||| |||||||||||||||| |||||    
T  12195853 atacttttactataaatatagaccttgtatcaaagcaaactttgagatagagggggctgaaacaagggtttagaa 12195779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 43 - 163
Target Start/End: Complemental strand, 25466554 - 25466434
Alignment:
Q  43 aacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagag 142  Q
    |||||||||||||||| |||  |||||||||| ||  | ||    ||||||||||||||||||||||||||| | ||||||||||||||||| ||||||     
T  25466554 aacataaacgtattttcgggctcagatttgttccagttcttcgaggatacttttactataaatatagatcttttgtcagagtaaaccttgaggtagaga- 25466456  T
Q  143 ggctg-aaacaagggtatagaa 163  Q
    ||||| |||||||||| |||||    
T  25466455 ggctgaaaacaagggtttagaa 25466434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 88 - 163
Target Start/End: Original strand, 3390354 - 3390429
Alignment:
Q  88 gatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||||||||||||||  |||||||||  ||||||||||| ||||  |||||||||||||||| |||||    
T  3390354 gatacttttactataaatatagacattgtatcagtataaaccttgagatagacggggctgaaacaagggtttagaa 3390429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 13039733 - 13039804
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||||||||||| ||||||||| |||||||||||| || ||  ||||||||||||||| |||||    
T  13039733 cttttactataaatatagatattgtatcagtgtaaaccttgagatataggaggctgaaacaagggtttagaa 13039804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 25477253 - 25477324
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||| ||||||||||  ||||||||| |||||||||||| ||||| |||||||||||||||| |||||    
T  25477253 cttttactgtaaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaa 25477324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 1230586 - 1230513
Alignment:
Q  90 tacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||| |||||||||||||| ||||||||| || |||| ||||| ||||||||| |||||||||||| |||||    
T  1230586 tactttcactataaatatagaccttgtatcatagcaaactttgagatagagagggttgaaacaagggtttagaa 1230513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 28241658 - 28241585
Alignment:
Q  90 tacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||| |||||||||||||| |||||||||||| |||| | ||| ||||| |||||||||||||||| |||||    
T  28241658 tactttcactataaatatagaccttgtatcagagcaaacttagagatagagggggctgaaacaagggtttagaa 28241585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 155
Target Start/End: Complemental strand, 3234065 - 3234003
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagg 155  Q
    ||||||||||||||||||| |||||||||| ||||||||| || ||||| ||||||||||||||    
T  3234065 cttttactataaatataga-cttgtatcagtgtaaaccttaagatagagggggctgaaacaagg 3234003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 51 - 134
Target Start/End: Complemental strand, 16455800 - 16455717
Alignment:
Q  51 cgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgag 134  Q
    ||||||||||||  |||||||||| ||| |||| || ||||| ||||||||||||||| | |||||||| | ||||||||||||    
T  16455800 cgtatttttgggctcagatttgttccaatttttcagggatacctttactataaatatataccttgtatcggtgtaaaccttgag 16455717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 163
Target Start/End: Complemental strand, 3632271 - 3632202
Alignment:
Q  94 tttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||||||||  ||||||||| |||||||||||| ||||| | | |||||||||||| |||||    
T  3632271 tttactataaatatagacattgtatcagtgtaaaccttgagatagagggagttgaaacaagggtttagaa 3632202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 65 - 134
Target Start/End: Complemental strand, 4816607 - 4816538
Alignment:
Q  65 cagatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgag 134  Q
    |||||||||| || ||||||||| | |||||||||||||||||||| ||||||||||  ||||| |||||    
T  4816607 cagatttgttacagattttaagcaagacttttactataaatatagaccttgtatcaggctaaactttgag 4816538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 163
Target Start/End: Complemental strand, 12186431 - 12186331
Alignment:
Q  66 agatttgtttcaaattttaagcgat-acttttactataaatatagatcttgtatcaga-gtaaaccttgagctagagagggctg-aaacaagggtataga 162  Q
    ||||||||| ||| |||| |||||| |||||||||||||||||| | ||||||||| | |||||||||||| ||||  |||||| |||||||||| ||||    
T  12186431 agatttgttccaattttttagcgattacttttactataaatataaaccttgtatcacatgtaaaccttgagatagaaggggctgaaaacaagggtttaga 12186332  T
Q  163 a 163  Q
    |    
T  12186331 a 12186331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 14459093 - 14459029
Alignment:
Q  99 tataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||| |||||||||||| |||| ||||| ||||| ||||||||| |||||| |||||    
T  14459093 tataaatatagaccttgtatcagagcaaactttgagatagagggggctgaaataagggtttagaa 14459029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 20915720 - 20915664
Alignment:
Q  65 cagatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcag 121  Q
    |||||||||| || ||||||||| | |||||||||||||||||||| ||||||||||    
T  20915720 cagatttgttacagattttaagcaagacttttactataaatatagaccttgtatcag 20915664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 14466312 - 14466383
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||||||| |||||||  |||||| ||| ||||||||||| ||||||||| ||||||||| || |||||    
T  14466312 cttttactatagatatagactttgtattagaataaaccttgagatagagagggttgaaacaagagtttagaa 14466383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 134
Target Start/End: Complemental strand, 3028189 - 3028143
Alignment:
Q  88 gatacttttactataaatatagatcttgtatcagagtaaaccttgag 134  Q
    ||||||||||||||||||||||| ||||||||| |||||||| ||||    
T  3028189 gatacttttactataaatatagaccttgtatcaaagtaaaccatgag 3028143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 130
Target Start/End: Original strand, 11138278 - 11138320
Alignment:
Q  88 gatacttttactataaatatagatcttgtatcagagtaaacct 130  Q
    ||||||||||||||| ||||| |||||||||||||||||||||    
T  11138278 gatacttttactatagatataaatcttgtatcagagtaaacct 11138320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 22490618 - 22490683
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggt 157  Q
    ||||||| |||||||||||  ||| || || |||||||||||| ||||| ||||||||||||||||    
T  22490618 cttttaccataaatatagacattgaattagtgtaaaccttgagatagagggggctgaaacaagggt 22490683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 24192707 - 24192630
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatac 92  Q
    |||||| ||||| ||| ||||||||||||||| |||| |||||||  || || ||||||| |||||||||||| ||||    
T  24192707 gtggcatgatggggcgctggcagcgaataacagaaacatatttttcagtgcaaatttgttccaaattttaagcaatac 24192630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 134
Target Start/End: Complemental strand, 26068661 - 26068592
Alignment:
Q  65 cagatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgag 134  Q
    |||||||||| || |||||||||   |||||||||||||||||||| ||||||||| || |||| |||||    
T  26068661 cagatttgttacagattttaagcaggacttttactataaatatagaccttgtatcaaagcaaactttgag 26068592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 152
Target Start/End: Complemental strand, 3630199 - 3630139
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaaca 152  Q
    |||||||||||||||||||  ||||||||  ||||| |||||| ||||| |||||||||||    
T  3630199 cttttactataaatatagacattgtatcaatgtaaaacttgagatagagggggctgaaaca 3630139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 134
Target Start/End: Complemental strand, 26066389 - 26066321
Alignment:
Q  66 agatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgag 134  Q
    ||||||||| || |||||||||   |||||||||||||||||||| ||||||||| || |||| |||||    
T  26066389 agatttgttacagattttaagcaggacttttactataaatatagaccttgtatcaaagcaaactttgag 26066321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 163
Target Start/End: Complemental strand, 12161889 - 12161819
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||| ||||||||||  ||||||||  |||||||||||| || || |||||||||||||||| |||||    
T  12161889 cttttactttaaatatagacattgtatcattgtaaaccttgagataaag-gggctgaaacaagggtttagaa 12161819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 149
Target Start/End: Original strand, 17012029 - 17012080
Alignment:
Q  98 ctataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaa 149  Q
    ||||||||||||| |||||||| |||||||||||||| ||||| || |||||    
T  17012029 ctataaatatagaccttgtatcggagtaaaccttgagatagaggggtctgaa 17012080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 144
Target Start/End: Complemental strand, 12937559 - 12937478
Alignment:
Q  66 agatttgtttcaaattttaagcgatacttttactataaa--tatagatcttgtatcaga-gtaaaccttgagctagagaggg 144  Q
    |||||| || |||||||| || |||||||||||||||||  ||||||  |||||||||| |||||||||||| || ||||||    
T  12937559 agatttattccaaatttttagggatacttttactataaatatatagacattgtatcagatgtaaaccttgagatacagaggg 12937478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 92
Target Start/End: Complemental strand, 24191603 - 24191533
Alignment:
Q  22 gatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatac 92  Q
    ||||| ||| ||||||||||||||| |||| |||||||  || || ||||||| |||||||||||| ||||    
T  24191603 gatggggcgctggcagcgaataacagaaacatatttttcagtgcaaatttgttccaaattttaagcaatac 24191533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 140
Target Start/End: Original strand, 10584105 - 10584153
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagag 140  Q
    ||||||||||||||||| |  ||||||||| |||||||||||| |||||    
T  10584105 cttttactataaatataaacattgtatcagtgtaaaccttgagatagag 10584153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 13870749 - 13870686
Alignment:
Q  99 tataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||   ||||||||||| |||||||||| ||||| ||||||||| |||||| |||||    
T  13870749 tataaatataggctttgtatcagagcaaaccttgagatagag-gggctgaaataagggtttagaa 13870686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 121
Target Start/End: Complemental strand, 30034945 - 30034913
Alignment:
Q  89 atacttttactataaatatagatcttgtatcag 121  Q
    |||||||||||||||||||||| ||||||||||    
T  30034945 atacttttactataaatatagaccttgtatcag 30034913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 121; Significance: 4e-62; HSPs: 74)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 48486226 - 48486390
Alignment:
Q  1 gatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttacta 100  Q
    ||||||||||||| ||||||| |||||||| ||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  48486226 gatggggtcacaatgtggcacaatggtgcgctggcagcgaataacagaaacgtatttttgggtgcagatttgttccaaattttaagcgatacttttacta 48486325  T
Q  101 taaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatg 165  Q
    |||||||||| ||||||||||||||||| ||||| ||||| |||||||||||||||| |||||||    
T  48486326 taaatatagaccttgtatcagagtaaactttgagatagagggggctgaaacaagggtttagaatg 48486390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 15 - 163
Target Start/End: Original strand, 47274648 - 47274796
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatctt 114  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||    
T  47274648 gtggcacgatggtgcgatggcagcgaataacataaacgtatttttgggtgcagatttgtttcaaattttaagcaatacttttactataaatatagacctt 47274747  T
Q  115 gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||| ||||| ||||| ||||| |||||||||||||||| |||||    
T  47274748 gtatcagactaaactttgagatagagggggctgaaacaagggtttagaa 47274796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 22803159 - 22802996
Alignment:
Q  1 gatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttacta 100  Q
    ||||||||| ||  |||||||||||||||| ||||||||||||||| ||||||||||| | || |||||||||| |||||||||||||||||||||||||    
T  22803159 gatggggtcgcatcgtggcacgatggtgcgctggcagcgaataacaaaaacgtatttt-gagtgcagatttgttccaaattttaagcgatacttttacta 22803061  T
Q  101 taaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatg 165  Q
    |||||||||| ||||||||||||||||| ||||| ||||| |||||||||||||||| |||||||    
T  22803060 taaatatagaccttgtatcagagtaaactttgagatagagggggctgaaacaagggtttagaatg 22802996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 15 - 166
Target Start/End: Complemental strand, 22801273 - 22801123
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatctt 114  Q
    ||||||||||||||||  |||||| ||||||| ||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||||| |||    
T  22801273 gtggcacgatggtgcgccggcagcaaataacagaaacgtatttt-gagtgcagatttgtttcaaattttaagcgatacttttactataaatatagacctt 22801175  T
Q  115 gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatga 166  Q
    |||||||||||||| ||||| ||||| |||||||||||||||| ||||||||    
T  22801174 gtatcagagtaaactttgagatagagggggctgaaacaagggtttagaatga 22801123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 5198327 - 5198489
Alignment:
Q  1 gatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttacta 100  Q
    |||||| |||||  |||||||||||||||| |||||||||| |||| |||| |||||||| || |||||||||| |||||||||||||||||||||||||    
T  5198327 gatgggatcacatcgtggcacgatggtgcgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagcgatacttttacta 5198426  T
Q  101 taaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||| |||||||||||| |||| ||||| ||||| |||||||||||||||| |||||    
T  5198427 taaatatagaccttgtatcagagcaaactttgagatagagggggctgaaacaagggtttagaa 5198489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 36920013 - 36919849
Alignment:
Q  1 gatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttacta 100  Q
    ||||||||| ||  |||||||||||||||| ||||||||||||  | |||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  36920013 gatggggtcgcatcgtggcacgatggtgcgctggcagcgaatagtagaaacgtatttttgggtgcagatttgttccaaattttaagcgatacttttacta 36919914  T
Q  101 taaatatagatcttgtatcagagtaaaccttg--agctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||| ||||||||||||||||| |||  || || || |||||||||||||||| |||||    
T  36919913 taaatatagaccttgtatcagagtaaactttgatagatatagggggctgaaacaagggtttagaa 36919849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 619873 - 619717
Alignment:
Q  1 gatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttacta 100  Q
    ||||||||| ||| ||||||| |||||||| |||| |||||||||| |||| |||||||||||  |||||| || |||||||||| ||||||||||||||    
T  619873 gatggggtcgcaacgtggcacaatggtgcgctggcggcgaataacagaaacatatttttgggtagagattttttccaaattttaaacgatacttttacta 619774  T
Q  101 taaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggt 157  Q
    |||||||||| ||||||||||||||||| ||||| ||||| ||||||||||||||||    
T  619773 taaatatagaccttgtatcagagtaaactttgagatagagggggctgaaacaagggt 619717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 40091841 - 40091679
Alignment:
Q  1 gatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttacta 100  Q
    ||||||||| ||| ||| |||||||||||  || ||||||||||| |||||||||||||  || || ||||||| |||||||||||||||||||||||||    
T  40091841 gatggggtcgcaacgtgacacgatggtgcactgacagcgaataacgtaaacgtatttttcagtgcatatttgttccaaattttaagcgatacttttacta 40091742  T
Q  101 taaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||| ||||||||| ||||||| ||||| ||||| |||||||||||||||| |||||    
T  40091741 taaatatagaccttgtatcaaagtaaactttgagatagagggggctgaaacaagggtttagaa 40091679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 51015153 - 51015315
Alignment:
Q  1 gatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttacta 100  Q
    ||||||||| ||  |||||||||||||||| ||||||||||||||| |||| |||||||  || |||||||||| |||||||||||||||||||||||||    
T  51015153 gatggggtcgcatcgtggcacgatggtgcgctggcagcgaataacagaaacatatttttcagtgcagatttgttccaaattttaagcgatacttttacta 51015252  T
Q  101 taaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||||||  ||||||||||| |||| | ||| ||||| |||||||||||||||| |||||    
T  51015253 taaatatagactttgtatcagagcaaacttggagatagagggggctgaaacaagggtttagaa 51015315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 36921921 - 36921788
Alignment:
Q  1 gatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttacta 100  Q
    ||||||||| ||  ||||||||||||||| |||||||||||||||| |||||||||||||| | |||||||||| ||||||||||||||||||||||| |    
T  36921921 gatggggtcgcattgtggcacgatggtgcattggcagcgaataacagaaacgtatttttggatgcagatttgttccaaattttaagcgatacttttacaa 36921822  T
Q  101 taaatatagatcttgtatcagagtaaaccttgag 134  Q
    |||||||||| ||||||||||||||||| |||||    
T  36921821 taaatatagaccttgtatcagagtaaactttgag 36921788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 15 - 163
Target Start/End: Original strand, 11434876 - 11435024
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatctt 114  Q
    |||||||||||||||| |||||||||| |||| |||| |||||||| || |||||||||| |||||||||||||| |||||||||||||||||||| |||    
T  11434876 gtggcacgatggtgcgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagcgaaacttttactataaatatagacctt 11434975  T
Q  115 gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||||| |||| | ||| ||||| |||||||||||||||| |||||    
T  11434976 gtatcagagcaaacttggagatagagggggctgaaacaagggtttagaa 11435024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 15 - 163
Target Start/End: Original strand, 24878910 - 24879058
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatctt 114  Q
    ||||||||||||| || ||||| ||||||||| |||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||||||| |||    
T  24878910 gtggcacgatggtacgctggcatcgaataacagaaacgtatttttgggtgcatatttgttccaaattttaagcgatacttttactataaatatagacctt 24879009  T
Q  115 gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||| |||||||| | ||| ||||| |||||||||| ||||| |||||    
T  24879010 gtatccgagtaaacttggagatagagggggctgaaactagggtttagaa 24879058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 15 - 163
Target Start/End: Original strand, 24880372 - 24880520
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatctt 114  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  24880372 gtggcacgatggtgcgctggcagcgaataacagaaacgtatttttggatgcagatttgttccaaattttaagcgatacttttactataaatatagacctt 24880471  T
Q  115 gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||| |||||||| | ||| ||||| ||||  |||| ||||| |||||    
T  24880472 gtatcggagtaaacttggagatagagggggcgtaaactagggtttagaa 24880520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 31850025 - 31849863
Alignment:
Q  1 gatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttacta 100  Q
    ||||||||| ||  |||||||||||||||| |||||||||| |||| |||| |||||||| || |||||||||| |||||||||||||||||||||||||    
T  31850025 gatggggtcgcatcgtggcacgatggtgcgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagcgatacttttacta 31849926  T
Q  101 taaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
     |||||||| ||||||||||||| ||||   ||| ||||| |||||||||||||||| |||||    
T  31849925 gaaatataggtcttgtatcagagcaaactaggagatagagggggctgaaacaagggtttagaa 31849863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 52942873 - 52942710
Alignment:
Q  1 gatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttacta 100  Q
    ||||||||||||| ||||||||||| |||| |||||||||||||||||||| ||||||| ||| |||||||||| |||||||||||  ||||||| ||||    
T  52942873 gatggggtcacaacgtggcacgatgatgcgctggcagcgaataacataaacatattttttggtgcagatttgttccaaattttaagtaatactttcacta 52942774  T
Q  101 taaatatagatcttg--tatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||| ||||  ||||||| ||||| ||||| ||||| |||||||||||||||| |||||    
T  52942773 taaatatagaccttgtatatcagactaaactttgagatagag-gggctgaaacaagggtttagaa 52942710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 15 - 163
Target Start/End: Original strand, 24888717 - 24888865
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatctt 114  Q
    |||||||||||||| | |||||||||| |||| |||| |||||||| || |||||||||| |||||||||||| |||||||||||||||||||||| |||    
T  24888717 gtggcacgatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagcaatacttttactataaatatagacctt 24888816  T
Q  115 gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||||| |||| | ||| ||||| |||||||||||||||| |||||    
T  24888817 gtatcagagcaaacttagagatagagggggctgaaacaagggtttagaa 24888865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 2 - 125
Target Start/End: Complemental strand, 3824998 - 3824875
Alignment:
Q  2 atggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactat 101  Q
    |||||||| ||  |||||||||||||||||||||  ||||||||| |||||||||||||||| |||||||||| |||||||||||| |||||||||||||    
T  3824998 atggggtcgcatcgtggcacgatggtgcgttggcgacgaataacagaaacgtatttttgggtgcagatttgttccaaattttaagcaatacttttactat 3824899  T
Q  102 aaatatagatcttgtatcagagta 125  Q
    ||||||||| ||||||||||||||    
T  3824898 aaatatagaccttgtatcagagta 3824875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 38409106 - 38409239
Alignment:
Q  1 gatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttacta 100  Q
    ||||||||| ||  ||||||||||||||||||||| ||||| |||| |||| |||||||| || |||||||||| |||||||||||||||||||||||||    
T  38409106 gatggggtcgcatcgtggcacgatggtgcgttggcggcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagcgatacttttacta 38409205  T
Q  101 taaatatagatcttgtatcagagtaaaccttgag 134  Q
    |||||||||| |||||||||||| |||| |||||    
T  38409206 taaatatagaccttgtatcagagcaaactttgag 38409239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 37089800 - 37089633
Alignment:
Q  1 gatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttacta 100  Q
    ||||||||| ||  |||||||||||||||| |||| |||||||||| |||||||||||| ||| |||||||||| |||||||||||| | ||||||||||    
T  37089800 gatggggtcgcatcgtggcacgatggtgcgctggcggcgaataacagaaacgtatttttaggtgcagatttgttccaaattttaagcaaaacttttacta 37089701  T
Q  101 taaatatagatcttgtatcagagtaaacct---tgagctagagagggctgaaacaagggtatagaatg 165  Q
    |||||||||| ||||||||||  ||||| |    ||| ||||| |||||||||||||||| |||||||    
T  37089700 taaatatagaccttgtatcaggctaaacttgagagagatagagggggctgaaacaagggtttagaatg 37089633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 14 - 163
Target Start/End: Original strand, 7941239 - 7941390
Alignment:
Q  14 ggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatct 113  Q
    ||||||||||||||||| |||   ||||||||| |||||||||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||  |    
T  7941239 ggtggcacgatggtgcgctggtgacgaataacagaaacgtatttttgggtgcagatttgttccaaattttaagcgaaacttttactataaatatagacgt 7941338  T
Q  114 tgtatcagagtaaacc--ttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||| |||||    ||| ||||| |||||||||||||||| |||||    
T  7941339 tgtatcagagcaaaccgggagagatagagggggctgaaacaagggtttagaa 7941390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 9174572 - 9174410
Alignment:
Q  1 gatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttacta 100  Q
    ||||||||| ||  |||||||||||||||| |||||| ||| |||| |||| ||||||||||| |||||||||| ||  |||||||| | ||||||||||    
T  9174572 gatggggtctcatcgtggcacgatggtgcgctggcagggaaaaacagaaacatatttttgggtgcagatttgttacagtttttaagcaagacttttacta 9174473  T
Q  101 taaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||| ||||||||| || |||| | ||| ||||| |||||||||||||||| |||||    
T  9174472 taaatatagaccttgtatcaaagcaaacttggagatagagggggctgaaacaagggtttagaa 9174410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 15 - 163
Target Start/End: Complemental strand, 22044801 - 22044654
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatctt 114  Q
    |||||||||||||| | |||||| ||| |||| |||| ||||||| | | |||||||||| ||||||||||||||||||||||||||||||||||  |||    
T  22044801 gtggcacgatggtgtgctggcagggaaaaacagaaacatatttttag-tgcagatttgttccaaattttaagcgatacttttactataaatataggcctt 22044703  T
Q  115 gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||||| |||| | ||| ||||| |||||||||||||||| |||||    
T  22044702 gtatcagagcaaacttggagatagagggggctgaaacaagggtttagaa 22044654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 24 - 163
Target Start/End: Complemental strand, 8756653 - 8756513
Alignment:
Q  24 tggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcagag 123  Q
    ||||||| |||  |||||||||| |||| ||||| | ||| |||||||||| |||||| ||| |||||||||||||||||||||||| ||||||||||||    
T  8756653 tggtgcgctggaggcgaataacagaaacatatttctcggtgcagatttgttccaaattataaacgatacttttactataaatatagaccttgtatcagag 8756554  T
Q  124 taaaccttgagctagagagggctg-aaacaagggtatagaa 163  Q
    ||||||||||| ||||  |||||| |||||||||| |||||    
T  8756553 taaaccttgagatagaaggggctgaaaacaagggtttagaa 8756513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 15 - 163
Target Start/End: Complemental strand, 22047096 - 22046949
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatctt 114  Q
    |||||||||||||| | |||||| ||| |||| |||| ||||||| | | |||||||||| ||||||||||||||||||||||||||||||||||  |||    
T  22047096 gtggcacgatggtgtgctggcagggaaaaacagaaacatatttttag-tgcagatttgttccaaattttaagcgatacttttactataaatataggcctt 22046998  T
Q  115 gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||| ||| |||| | ||| ||||| |||||||||||||||| |||||    
T  22046997 gtatcggagcaaacttggagatagagggggctgaaacaagggtttagaa 22046949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 5637880 - 5637762
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatctt 114  Q
    |||||| ||||||| | |||||||||| |||| ||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  5637880 gtggcatgatggtgagctggcagcgaaaaacagaaacgtatttt-gggtgcagatttgttccaaattttaagcgatacttttactataaatatagacctt 5637782  T
Q  115 gtatcagagtaaaccttgag 134  Q
    |||| |||| |||| |||||    
T  5637781 gtataagagcaaactttgag 5637762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 32 - 163
Target Start/End: Original strand, 9148190 - 9148322
Alignment:
Q  32 tggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaacctt 131  Q
    ||||||| ||||||| ||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||| |||| ||    
T  9148190 tggcagcaaataacagaaacgtatttt-gggtgcagatttgttccaaattttaagcgatacttttactataaatataggccttgtatcagagcaaacttt 9148288  T
Q  132 --gagctagagagggctgaaacaagggtatagaa 163  Q
      ||| ||||| |||||||| ||||||| |||||    
T  9148289 gagagatagagggggctgaagcaagggtttagaa 9148322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 11006667 - 11006546
Alignment:
Q  1 gatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttacta 100  Q
    ||||||||| ||  |||||||||||||||| ||||||| || |||| |||| ||||||||||| |||||||||| || ||||||||| | ||||||||||    
T  11006667 gatggggtcgcatcgtggcacgatggtgcgctggcagcaaaaaacagaaacatatttttgggtgcagatttgttacagattttaagcaagacttttacta 11006568  T
Q  101 taaatatagatcttgtatcaga 122  Q
    |||||||||| |||||||||||    
T  11006567 taaatatagaccttgtatcaga 11006546  T

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Target: chr4; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 48 - 163
Target Start/End: Original strand, 36378246 - 36378361
Alignment:
Q  48 aaacgtatttttgggtccagatttgtttcaaattt-taagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggct 146  Q
    ||||||||||||||| ||||||||||| ||| ||| | || | |||||||||||||||||||||  |||||||||| ||||||||||| ||||  |||||    
T  36378246 aaacgtatttttggg-ccagatttgttacaattttatgagggttacttttactataaatatagactttgtatcagaataaaccttgagatagacggggct 36378344  T
Q  147 gaaacaagggtatagaa 163  Q
    ||||||||||| |||||    
T  36378345 gaaacaagggtttagaa 36378361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 92 - 166
Target Start/End: Original strand, 19095880 - 19095954
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatga 166  Q
    |||||||||||||||||||  ||||||||| |||||||||||| ||||| |||||||||||||||| ||||||||    
T  19095880 cttttactataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaatga 19095954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 98 - 163
Target Start/End: Original strand, 19322701 - 19322766
Alignment:
Q  98 ctataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||| |||||    
T  19322701 ctataaatatagatcttgtatcagagtaaaccttgagatagagggggatgaaacaagggtttagaa 19322766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 92 - 163
Target Start/End: Complemental strand, 18537806 - 18537734
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctg-aaacaagggtatagaa 163  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||| |||||||||| |||||    
T  18537806 cttttactataaatatagatcttgtatcagagtaaacattgagatagagggggctgaaaacaagggtttagaa 18537734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 92 - 163
Target Start/End: Complemental strand, 24446914 - 24446843
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||||||||||  ||||||||| |||||||||||| ||||| |||||||||||||||| |||||    
T  24446914 cttttactataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaa 24446843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 65 - 163
Target Start/End: Complemental strand, 16934505 - 16934407
Alignment:
Q  65 cagatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||| || |||||||||   |||||||||||||||||||| ||||||||| || |||| ||||| ||||| ||||||| |||||||| |||||    
T  16934505 cagatttgttacagattttaagcaggacttttactataaatatagaccttgtatcaaagcaaactttgagatagagggggctgatacaagggtttagaa 16934407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 65 - 163
Target Start/End: Original strand, 18847124 - 18847222
Alignment:
Q  65 cagatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||| || ||||||||| | |||||||||||||||||||| ||||||||| |  |||| ||||| ||||| ||| |||||||||||| |||||    
T  18847124 cagatttgttacagattttaagcaagacttttactataaatatagaccttgtatcaaaacaaactttgagatagagggggttgaaacaagggtttagaa 18847222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 93 - 163
Target Start/End: Complemental strand, 37313400 - 37313330
Alignment:
Q  93 ttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||||||||||||| | |||||||| ||||||||||||| ||||| |||||||||||||||| |||||    
T  37313400 ttttactataaatataggttttgtatcaaagtaaaccttgagatagagggggctgaaacaagggtttagaa 37313330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 166
Target Start/End: Original strand, 5100992 - 5101069
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatga 166  Q
    |||||||||||||||||||||| |||| ||||| |||||||||||| ||||| || ||||||||| ||| ||||||||    
T  5100992 atacttttactataaatatagaccttgaatcagggtaaaccttgagatagaggggactgaaacaaaggtttagaatga 5101069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 166
Target Start/End: Original strand, 56030443 - 56030516
Alignment:
Q  93 ttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatga 166  Q
    |||||||||||||||||   |||||||||||||||||||||| ||||  |||||||||||||||| ||||||||    
T  56030443 ttttactataaatataggctttgtatcagagtaaaccttgagatagaaggggctgaaacaagggtttagaatga 56030516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 41 - 134
Target Start/End: Original strand, 25357583 - 25357677
Alignment:
Q  41 ataacataaacgtatttttgggtccagatttgtttcaaatttta--agcgatacttttactataaatatagatcttgtatcagagtaaaccttgag 134  Q
    |||||| || ||||||||||||  |||||||||| ||| |||||  || ||||||||||||||||||||||| ||||||||| |||||||||||||    
T  25357583 ataacagaatcgtatttttgggctcagatttgttccaa-ttttacgagggatacttttactataaatatagaccttgtatcaaagtaaaccttgag 25357677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 66 - 142
Target Start/End: Complemental strand, 40999308 - 40999232
Alignment:
Q  66 agatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagag 142  Q
    ||||||||| ||||||||||| | || |||||||||||||||| | ||| ||||||||||||||||||| |||||||    
T  40999308 agatttgttccaaattttaagggttatttttactataaatataaaccttatatcagagtaaaccttgaggtagagag 40999232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 163
Target Start/End: Complemental strand, 44600198 - 44600102
Alignment:
Q  68 atttgtttcaaattt-taagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||||||||||| | ||  |||||||||||||||||||||| ||||||| | || |||| ||||| ||||| |||||||||||||||| |||||    
T  44600198 atttgtttcaaatttatgagttatacttttactataaatatagaccttgtattaaagcaaactttgagatagagggggctgaaacaagggtttagaa 44600102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 163
Target Start/End: Complemental strand, 3937543 - 3937473
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||||||||||||||| ||| ||||||||||||||||||| ||||| | |||||||||||||| |||||    
T  3937543 cttttactataaatataga-cttttatcagagtaaaccttgagatagagggagctgaaacaagggtttagaa 3937473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 88 - 163
Target Start/End: Complemental strand, 15032875 - 15032800
Alignment:
Q  88 gatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||||||||||||||  | ||| |||||||||||||||| || || |||||||||||||||| |||||    
T  15032875 gatacttttactataaatatagacttggtaccagagtaaaccttgagataaagggggctgaaacaagggtttagaa 15032800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 65 - 163
Target Start/End: Complemental strand, 9176836 - 9176738
Alignment:
Q  65 cagatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||| ||  |||||||| | || ||||||||||||||||| ||||||||| || |||| | ||| ||||| |||||||||||||||| |||||    
T  9176836 cagatttgttacagtttttaagcaagacatttactataaatatagaccttgtatcaaagcaaacttggagatagagggggctgaaacaagggtttagaa 9176738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 65 - 163
Target Start/End: Complemental strand, 16932151 - 16932053
Alignment:
Q  65 cagatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||| || |||||||||   |||||||||||||||||| | ||||||||| || |||| ||||| ||||| ||||||| |||||||| |||||    
T  16932151 cagatttgttacagattttaagcaggacttttactataaatataaaccttgtatcaaagcaaactttgagatagagggggctgatacaagggtttagaa 16932053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 93 - 163
Target Start/End: Complemental strand, 33415821 - 33415751
Alignment:
Q  93 ttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||| ||||||||   |||||||||||||||||||||| ||||| |||||||||||||||| |||||    
T  33415821 ttttactacaaatataggctttgtatcagagtaaaccttgagatagagggggctgaaacaagggtttagaa 33415751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 6764835 - 6764908
Alignment:
Q  90 tacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||| |||||||||||||| |||||||||||| |||| ||||| ||||  |||||||||||||||| |||||    
T  6764835 tactttcactataaatatagaccttgtatcagagcaaactttgagatagaaggggctgaaacaagggtttagaa 6764908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 14633316 - 14633388
Alignment:
Q  90 tacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||| |||||||||||||| ||||||||||||||||| ||||| |||| ||||||||||||| ||| |||||    
T  14633316 tactttcactataaatatagaccttgtatcagagtaaactttgagataga-agggctgaaacaaaggtttagaa 14633388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 40637070 - 40637143
Alignment:
Q  90 tacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||| |||||||||||||| |||||||||||| |||| | ||| ||||| |||||||||||||||| |||||    
T  40637070 tactttcactataaatatagaccttgtatcagagcaaacttggagatagagggggctgaaacaagggtttagaa 40637143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 47868397 - 47868470
Alignment:
Q  90 tacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||| |||||||||||||| |||||||||||| |||| | ||| ||||||||||||||| |||||| |||||    
T  47868397 tactttcactataaatatagaccttgtatcagagcaaacttggagatagagagggctgaaagaagggtttagaa 47868470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 163
Target Start/End: Complemental strand, 16186176 - 16186100
Alignment:
Q  88 gatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggct-gaaacaagggtatagaa 163  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||  |||| |||||  |||||||||| |||||    
T  16186176 gatacttttactataaatataaaccttgtatcagagtaaaccttgagagagagggggctaaaaacaagggtttagaa 16186100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 163
Target Start/End: Complemental strand, 38928557 - 38928442
Alignment:
Q  48 aaacgtatttttgggtccagatttgtttcaaattt-taagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggct 146  Q
    ||||||||||||||| || |||||  ||| ||||| | || ||| ||||||||||||||||||   |||||| ||||||||||||||| ||||| |||||    
T  38928557 aaacgtatttttggg-cctgattttgttccaatttatgagggattcttttactataaatataggctttgtattagagtaaaccttgagatagagggggct 38928459  T
Q  147 gaaacaagggtatagaa 163  Q
    |||||||| || |||||    
T  38928458 gaaacaagagtttagaa 38928442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 89 - 165
Target Start/End: Complemental strand, 14787771 - 14787693
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaacctt--gagctagagagggctgaaacaagggtatagaatg 165  Q
    |||||||||||||||||||||| ||||||||| | ||||| ||  ||| ||||| |||||||||||||||| |||||||    
T  14787771 atacttttactataaatatagaccttgtatcatactaaactttgagagatagagggggctgaaacaagggtttagaatg 14787693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 163
Target Start/End: Complemental strand, 38270321 - 38270250
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||||||||||  ||||||||| |||||||||||| ||||   ||||||||||||||| |||||    
T  38270321 cttttactataaatatagacattgtatcagtgtaaaccttgagatagaagaggctgaaacaagggtttagaa 38270250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 2485210 - 2485136
Alignment:
Q  90 tacttttactataaatatagatcttgtatcagagtaaaccttgagctag-agagggctgaaacaagggtatagaa 163  Q
    |||||| |||||||||||||| |||||||||||| |||| ||||||||| || ||||| |||||||||| |||||    
T  2485210 tactttcactataaatatagaccttgtatcagagcaaactttgagctagaagggggctaaaacaagggtttagaa 2485136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 9176922 - 9176836
Alignment:
Q  1 gatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagc 87  Q
    ||||||||| ||  |||||||||||||||| |||||| ||| |||| |||| ||||||||||| ||||||||||  |||||| ||||    
T  9176922 gatggggtctcatcgtggcacgatggtgcgctggcagggaaaaacagaaacatatttttgggtgcagatttgttataaatttaaagc 9176836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 11009018 - 11008932
Alignment:
Q  1 gatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagc 87  Q
    ||||||||| ||  |||||||||||||||  ||||||| || |||| |||| ||||||||||| |||||||||| || |||||||||    
T  11009018 gatggggtcgcatcgtggcacgatggtgcactggcagcaaaaaacagaaacatatttttgggtgcagatttgttacagattttaagc 11008932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 154
Target Start/End: Original strand, 41997494 - 41997552
Alignment:
Q  96 tactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaag 154  Q
    |||||||||||||||  |||||||||||||||||||||| || || |||||||||||||    
T  41997494 tactataaatatagactttgtatcagagtaaaccttgagataaagggggctgaaacaag 41997552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 12102088 - 12102161
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctaga-gagggctg-aaacaagggtatagaa 163  Q
    |||||||||||||||||||||||||||||||  |||||||||| |||| | |||||| |||||||||| |||||    
T  12102088 cttttactataaatatagatcttgtatcagataaaaccttgagatagaggggggctgaaaacaagggtttagaa 12102161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 163
Target Start/End: Complemental strand, 17662576 - 17662498
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaaccttgagc----tagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||||||||||||| |||||||||||| |||| |||||     ||||| |||||||||||||||| |||||    
T  17662576 atacttttactataaatatagaccttgtatcagagcaaactttgagagagatagagggggctgaaacaagggtttagaa 17662498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 134
Target Start/End: Complemental strand, 52043791 - 52043722
Alignment:
Q  66 agatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcaga-gtaaaccttgag 134  Q
    ||||||||| ||| |||| || ||| ||||||||||||||||||| ||||||||||| ||||||||||||    
T  52043791 agatttgttccaattttttagggatgcttttactataaatatagaccttgtatcagatgtaaaccttgag 52043722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 2891314 - 2891386
Alignment:
Q  92 cttttactataaatatagatcttgta-tcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||||||||||  ||||| |||| ||||||||| || ||||| |||||||||||||||| |||||    
T  2891314 cttttactataaatatagacattgtaatcagtgtaaaccttaagatagagggggctgaaacaagggtttagaa 2891386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 11008932 - 11008876
Alignment:
Q  65 cagatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcag 121  Q
    |||||||||| || ||||||||| | |||||||||||||||||||| ||||||||||    
T  11008932 cagatttgttacagattttaagcaagacttttactataaatatagaccttgtatcag 11008876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 163
Target Start/End: Complemental strand, 18409681 - 18409611
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||||||||||  ||||||||| ||||||  |||| |||||| ||||||||||||||| |||||    
T  18409681 cttttactataaatatagaatttgtatcagtgtaaacaatgagatagaga-ggctgaaacaagggtttagaa 18409611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 134
Target Start/End: Original strand, 36380328 - 36380414
Alignment:
Q  48 aaacgtatttttgggtccagatttgtttcaaattt-taagcgatacttttactataaatatagatcttgtatcagagtaaaccttgag 134  Q
    |||| |||||||||| ||||||||||| ||| ||| | || | |||||||||||||||||| ||  ||||||||||||||||||||||    
T  36380328 aaacatatttttggg-ccagatttgttacaattttatgagggttacttttactataaatatggactttgtatcagagtaaaccttgag 36380414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 18847038 - 18847124
Alignment:
Q  1 gatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagc 87  Q
    ||||||||| ||  |||||||||||||||| | || | ||| |||| |||| ||||||||||| |||||||||| ||||||| ||||    
T  18847038 gatggggtcgcatcgtggcacgatggtgcgctcgcggggaaaaacagaaacatatttttgggtgcagatttgttacaaatttaaagc 18847124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 166
Target Start/End: Original strand, 13543953 - 13544031
Alignment:
Q  93 ttttactataaatatagatcttgtatcaga-gtaaaccttgagc----tagagagggctgaaacaagggtatagaatga 166  Q
    |||||||||||||||||||||||||||||| |||||| |||||     ||||| |||||||||||||| | ||||||||    
T  13543953 ttttactataaatatagatcttgtatcagatgtaaactttgagagagatagagggggctgaaacaaggatctagaatga 13544031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 155
Target Start/End: Complemental strand, 12396180 - 12396117
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagg 155  Q
    |||||||||||||||||||  |||||| |  |||||||||||| ||||  ||||||||||||||    
T  12396180 cttttactataaatatagacattgtataaatgtaaaccttgagatagatggggctgaaacaagg 12396117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 155
Target Start/End: Complemental strand, 12401142 - 12401079
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagg 155  Q
    |||||||||||||||||||  |||||| |  |||||||||||| ||||  ||||||||||||||    
T  12401142 cttttactataaatatagacattgtataaatgtaaaccttgagatagatggggctgaaacaagg 12401079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 157
Target Start/End: Original strand, 16453305 - 16453372
Alignment:
Q  90 tacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggt 157  Q
    ||||||| ||||||||||||   ||||||||||| |||||  ||| ||||| ||||||||||||||||    
T  16453305 tacttttgctataaatataggctttgtatcagagcaaaccgagagatagagggggctgaaacaagggt 16453372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 142
Target Start/End: Original strand, 28453681 - 28453736
Alignment:
Q  88 gatacttttactataaatatagatcttgtatcaga-gtaaaccttgagctagagag 142  Q
    |||| |||||||||||||||||| ||||||||||| || ||||||||| |||||||    
T  28453681 gatatttttactataaatatagaccttgtatcagatgtgaaccttgaggtagagag 28453736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 163
Target Start/End: Original strand, 53405122 - 53405199
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaaccttgagctagaga---gggctgaaacaagggtatagaa 163  Q
    |||||||||||||||||||||| ||||||||||  ||||| |||||  ||| |   |||||||||||||||| |||||    
T  53405122 atacttttactataaatatagaccttgtatcaggctaaactttgagagagatagaggggctgaaacaagggtttagaa 53405199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 150
Target Start/End: Complemental strand, 18535164 - 18535106
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaa 150  Q
    ||||||| ||||||||||| || |  ||||||||||||||||| ||||| |||||||||    
T  18535164 cttttacaataaatatagacctcgattcagagtaaaccttgagatagagggggctgaaa 18535106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 134
Target Start/End: Complemental strand, 22132737 - 22132692
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaaccttgag 134  Q
    |||||||||||||||||||||| ||||||||||  ||||| |||||    
T  22132737 atacttttactataaatatagaccttgtatcaggctaaactttgag 22132692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 134
Target Start/End: Complemental strand, 47211084 - 47211039
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaaccttgag 134  Q
    |||||||||||||||||||||| ||||||||||  ||||| |||||    
T  47211084 atacttttactataaatatagaccttgtatcaggctaaactttgag 47211039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 115; Significance: 2e-58; HSPs: 70)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 28207494 - 28207332
Alignment:
Q  1 gatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttacta 100  Q
    ||||||||||||| |||||||||||||||| |||| ||||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||||||    
T  28207494 gatggggtcacaacgtggcacgatggtgcgctggcggcgaataacataaacgtttttttgggtgcagatttgttccaaattttaagcgatacttttacta 28207395  T
Q  101 taaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||| ||||||||||| ||||| ||||| ||||| |||||||||||||||| |||||    
T  28207394 taaatatagaccttgtatcagactaaactttgagatagagggggctgaaacaagggtttagaa 28207332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 15 - 163
Target Start/End: Original strand, 13214948 - 13215096
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatctt 114  Q
    |||||||||||||| ||||||||| ||||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  13214948 gtggcacgatggtgtgttggcagcaaataacaaaaacgtatttttgggtgcagatttgttccaaattttaagcgatacttttactataaatatagacctt 13215047  T
Q  115 gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||||  ||||| ||||| |||||||||||||||| |||||    
T  13215048 gtatcagagtaaattttgagatagagggggctgaaacaagggtttagaa 13215096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 10400256 - 10400091
Alignment:
Q  1 gatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttacta 100  Q
    ||||||||| ||  |||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||| |||||| |||    
T  10400256 gatggggtcgcatcgtggcacgatggtgcgctggcagcaaataacataaacgtatttttgggtgcagatttgttccaaattttaagcgaaactttttcta 10400157  T
Q  101 taaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatga 166  Q
    |||||||||| |||||||||||| ||||   ||| ||||| |||||||||||||||| ||||||||    
T  10400156 taaatatagaccttgtatcagagcaaactgggagatagagggggctgaaacaagggtttagaatga 10400091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 15 - 163
Target Start/End: Original strand, 41646787 - 41646935
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatctt 114  Q
    |||||||||||||||  ||||||||||||||| |||| ||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  41646787 gtggcacgatggtgcactggcagcgaataacagaaacatatttttggatgcagatttgttccaaattttaagcgatacttttactataaatatagacctt 41646886  T
Q  115 gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||||| ||||| ||||| ||||||||| |||||| |||||    
T  41646887 gtatcagagtaaactttgagatagagggggctgaaataagggtttagaa 41646935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 15 - 163
Target Start/End: Original strand, 51752232 - 51752380
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatctt 114  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||| |||    
T  51752232 gtggcacgatggtgcgctggcggcgaataacataaacgtatttttgggtgcagatttgttccaaattttaagcgaaacttttactataaatatagacctt 51752331  T
Q  115 gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||||| |||| | ||| ||||| ||||||||||||| || |||||    
T  51752332 gtatcagagcaaacttggagatagagggggctgaaacaagagtttagaa 51752380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 17 - 163
Target Start/End: Original strand, 13761706 - 13761852
Alignment:
Q  17 ggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatcttgt 116  Q
    |||||||||||| | |||| |||||||||| |||||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||| |||||    
T  13761706 ggcacgatggtgtgctggcggcgaataacagaaacgtatttttgggtgcagatttgttccaaattttaagcgaaacttttactataaatatagaccttgt 13761805  T
Q  117 atcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||| |||| | ||| |||||||||||||||||||||| |||||    
T  13761806 atcagagcaaacttggagatagagagggctgaaacaagggtttagaa 13761852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 15 - 157
Target Start/End: Original strand, 47451515 - 47451657
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatctt 114  Q
    |||||||||||||||| || |||||||||||| |||||||||||| ||| |||||||||| ||||| ||||||||||||||||||||||||||||| |||    
T  47451515 gtggcacgatggtgcgctgacagcgaataacagaaacgtattttttggtgcagatttgttccaaatattaagcgatacttttactataaatatagacctt 47451614  T
Q  115 gtatcagagtaaaccttgagctagagagggctgaaacaagggt 157  Q
    |||||||||||||| ||||| ||||| ||||| ||||||||||    
T  47451615 gtatcagagtaaactttgagatagagggggcttaaacaagggt 47451657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 51749892 - 51750054
Alignment:
Q  1 gatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttacta 100  Q
    ||||||||| ||  |||||||||| ||||| |||| |||||||||| |||||||||||||||| |||||||||| |||||||||||||| ||||||||||    
T  51749892 gatggggtcgcatcgtggcacgatagtgcgctggcggcgaataacagaaacgtatttttgggtgcagatttgttccaaattttaagcgaaacttttacta 51749991  T
Q  101 taaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||| |||||||||||| |||| | ||| ||||| |||||||||||||||| |||||    
T  51749992 taaatatagaccttgtatcagagcaaacttggagatagagggggctgaaacaagggtttagaa 51750054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 6823737 - 6823900
Alignment:
Q  1 gatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttacta 100  Q
    ||||||||| ||  |||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||    
T  6823737 gatggggtcgcatcgtggcacgatggtgcgctggcggcgaataacataaacgtatttttgggtgcagatttgttccaaattttaagcgaaacttttacta 6823836  T
Q  101 taaatatagatcttgtatcagagtaaaccttgagctaga-gagggctgaaacaagggtatagaa 163  Q
    |  ||||||| |||||||||||| |||| ||||| |||| | |||||||||||||||| |||||    
T  6823837 tttatatagaccttgtatcagagcaaactttgagatagaggggggctgaaacaagggtttagaa 6823900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 15 - 154
Target Start/End: Complemental strand, 38925892 - 38925753
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatctt 114  Q
    |||||||||||| |||||||||||||| |||| ||  |||||||||||| ||||||| || ||||||||||||||||||||||||||||||||||| |||    
T  38925892 gtggcacgatggggcgttggcagcgaacaacagaagtgtatttttgggtgcagatttattccaaattttaagcgatacttttactataaatatagacctt 38925793  T
Q  115 gtatcagagtaaaccttgagctagagagggctgaaacaag 154  Q
    |||||||||||||| ||||| ||||| |||||||||||||    
T  38925792 gtatcagagtaaactttgagatagagggggctgaaacaag 38925753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 15823399 - 15823561
Alignment:
Q  1 gatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttacta 100  Q
    ||||||||| ||  |||||||||||||||| | ||||| ||||||| |||| ||||||||| | |||||||||| |||||||||||||||||||||||||    
T  15823399 gatggggtcgcatcgtggcacgatggtgcgctagcagcaaataacagaaacatatttttggatgcagatttgttccaaattttaagcgatacttttacta 15823498  T
Q  101 taaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||| ||||||||| ||||||| | ||| || || |||||||||||||||| |||||    
T  15823499 taaatatagaccttgtatcaaagtaaacttagagataaagggggctgaaacaagggtttagaa 15823561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 20302312 - 20302474
Alignment:
Q  1 gatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttacta 100  Q
    ||||||||| ||  |||||||||||||||| |||| |||||||||| |||| ||||||||||| || ||||||| ||||||||||| || ||||||| ||    
T  20302312 gatggggtcgcatcgtggcacgatggtgcgctggcggcgaataacagaaacatatttttgggtgcatatttgttccaaattttaagtgaaacttttatta 20302411  T
Q  101 taaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||| |||||||||||| |||| ||||| ||||| |||||||||||||||| |||||    
T  20302412 taaatatagaccttgtatcagagcaaactttgagatagagggggctgaaacaagggtttagaa 20302474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 15 - 163
Target Start/End: Original strand, 6822882 - 6823030
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatctt 114  Q
    |||||||||||||||| |||| |||||||| | ||| |||||||||||| |||||||||| |||||||||||||| |||||||||||  ||||||| |||    
T  6822882 gtggcacgatggtgcgctggcggcgaataatagaaatgtatttttgggtgcagatttgttccaaattttaagcgaaacttttactatttatatagacctt 6822981  T
Q  115 gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||||| |||| ||||| ||||| |||||||||||||||| |||||    
T  6822982 gtatcagagcaaactttgagatagagggggctgaaacaagggtttagaa 6823030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 30790822 - 30790673
Alignment:
Q  1 gatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttacta 100  Q
    |||||| || ||| |||||||||||||||| |||  | ||| |||||||||||||||||  || |||||||||| |||||||||||||||||||||||||    
T  30790822 gatgggatcgcaatgtggcacgatggtgcgctggaggggaaaaacataaacgtatttttcagtgcagatttgttccaaattttaagcgatacttttacta 30790723  T
Q  101 taaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaa 150  Q
    ||||||||||  |||||||||||||||||||||| ||||| | |||||||    
T  30790722 taaatatagacattgtatcagagtaaaccttgagatagagggagctgaaa 30790673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 15 - 163
Target Start/End: Original strand, 39462385 - 39462534
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtattttt-gggtccagatttgtttcaaattttaagcgatacttttactataaatatagatct 113  Q
    |||||||||||||||| | |||| |||||||| |||||||||||| |||| |||||||||| |||||||||||  ||||||| |||||||||||||| ||    
T  39462385 gtggcacgatggtgcgcttgcagtgaataacagaaacgtattttttgggtgcagatttgttccaaattttaagtaatactttcactataaatatagacct 39462484  T
Q  114 tgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||||||||||| ||||| |||||| ||||||||||| ||| |||||    
T  39462485 tgtatcagagtaaactttgagatagagaaggctgaaacaaaggtttagaa 39462534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 14098380 - 14098246
Alignment:
Q  18 gcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatcttgta 117  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||| |||||||||||  ||||||| |||||||||||||| ||||||    
T  14098380 gcacgatggtgcgctggcagcgaataacataaacgtatttttgggtgcaga-ttgttccaaattttaagtaatactttcactataaatatagaccttgta 14098282  T
Q  118 tcagagtaaaccttgagctagagagggctgaaacaa 153  Q
    ||| | ||||| ||||| ||||| || |||||||||    
T  14098281 tcaaactaaactttgagatagaggggactgaaacaa 14098246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 28840545 - 28840664
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatctt 114  Q
    |||||||||||||| | |||||||||| |||| |||| |||||||| || |||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  28840545 gtggcacgatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagcgatacttttactataaatatagacctt 28840644  T
Q  115 gtatcagagtaaaccttgag 134  Q
    ||||||||| |||| |||||    
T  28840645 gtatcagagcaaactttgag 28840664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 15 - 157
Target Start/End: Complemental strand, 3580032 - 3579888
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatctt 114  Q
    |||||||||||||||| |||| ||||||| |||||||||||||| | || || ||||||| |||||||||||||||||||||||| |||||||||| |||    
T  3580032 gtggcacgatggtgcgctggcggcgaatatcataaacgtattttagagtgcaaatttgttccaaattttaagcgatacttttactttaaatatagacctt 3579933  T
Q  115 gtatcagagtaaaccttgagctaga--gagggctgaaacaagggt 157  Q
    ||||||| |||||  ||||| ||||  | ||||||||||||||||    
T  3579932 gtatcagcgtaaaatttgagatagagggggggctgaaacaagggt 3579888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 15 - 104
Target Start/End: Original strand, 49687407 - 49687496
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaa 104  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  49687407 gtggcacgatggtgcgctgacagcgaataacataaacgtatttttgggtgcagatttgttccaaattttaagcgatacttttactataaa 49687496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 15 - 163
Target Start/End: Original strand, 28842360 - 28842510
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatctt 114  Q
    ||||||||||||||   |||||||||| |||| |||| |||||||| || || ||||||| ||||||||||||||||||||||||||||||||| | |||    
T  28842360 gtggcacgatggtgtcctggcagcgaaaaacagaaacatatttttgagtgcaaatttgttccaaattttaagcgatacttttactataaatataaacctt 28842459  T
Q  115 gtatcagagtaaacctt--gagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||||| |||| ||  ||| ||||| |||||||||||||||| |||||    
T  28842460 gtatcagagcaaactttgagagatagagggggctgaaacaagggtttagaa 28842510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 92 - 165
Target Start/End: Complemental strand, 14183923 - 14183850
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatg 165  Q
    ||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  14183923 cttttactataaatatagaccatgtatcagagtaaaccttgagatagagagggctgaaacaagggtttagaatg 14183850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 41 - 163
Target Start/End: Original strand, 42922126 - 42922249
Alignment:
Q  41 ataacataaacgtatttttgggtccagatttgtttcaaattt-taagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctaga 139  Q
    ||||||||| | ||||||||||   ||||||||| ||||||| | || |||||||||||||||||||||||| ||||||||||||||||||| || ||||    
T  42922126 ataacataatcatatttttgggctgagatttgttccaaatttatgagggatacttttactataaatatagattttgtatcagagtaaaccttaagataga 42922225  T
Q  140 gagggctgaaacaagggtatagaa 163  Q
    | ||| ||||| |||||| |||||    
T  42922226 gggggttgaaataagggtttagaa 42922249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 65 - 163
Target Start/End: Original strand, 16231518 - 16231616
Alignment:
Q  65 cagatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||| || ||||||||| | |||||||||||||||||||| ||||||||| || |||| ||||| ||||| |||||||||||||||| |||||    
T  16231518 cagatttgttacagattttaagcaagacttttactataaatatagaccttgtatcaaagcaaactttgagatagagggggctgaaacaagggtctagaa 16231616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 88 - 157
Target Start/End: Complemental strand, 49495540 - 49495471
Alignment:
Q  88 gatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggt 157  Q
    |||||||||||||||||||||||  |||||||||||||||||||||| ||||| ||||||||||||||||    
T  49495540 gatacttttactataaatatagactttgtatcagagtaaaccttgagatagagggggctgaaacaagggt 49495471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 88 - 163
Target Start/End: Complemental strand, 18800910 - 18800835
Alignment:
Q  88 gatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| || |  |||||||||||| ||| |||||    
T  18800910 gatacttttactataaatatagaccttgtatcagagtaaaccttgagatacaaggggctgaaacaaaggtttagaa 18800835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 93 - 163
Target Start/End: Original strand, 17318838 - 17318908
Alignment:
Q  93 ttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||||||||||||| | |||||||| ||||||||||||| ||||| |||||||||||||||| |||||    
T  17318838 ttttactataaatataggttttgtatcatagtaaaccttgagatagagggggctgaaacaagggtttagaa 17318908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 93 - 163
Target Start/End: Complemental strand, 25251611 - 25251541
Alignment:
Q  93 ttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||||||||||||||  |||||||||||||||||||||| ||||| |||||||||||| ||| |||||    
T  25251611 ttttactataaatatagactttgtatcagagtaaaccttgagatagagggggctgaaacaaaggtttagaa 25251541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 166
Target Start/End: Complemental strand, 2949571 - 2949494
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatga 166  Q
    |||||||||| |||||||||||| ||| ||| ||| |||||||||| ||||| |||||||||||||||| ||||||||    
T  2949571 atacttttacaataaatatagatattgaatccgagaaaaccttgagatagagggggctgaaacaagggtttagaatga 2949494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 66 - 163
Target Start/End: Original strand, 16226085 - 16226182
Alignment:
Q  66 agatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||||| || ||||||||| | |||||||||||||||||||| ||||||||| || |||| ||||| ||||| || || |||||||||| |||||    
T  16226085 agatttgttacagattttaagcaagacttttactataaatatagaccttgtatcaaagcaaactttgagatagaggggtctaaaacaagggtttagaa 16226182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 166
Target Start/End: Complemental strand, 28998593 - 28998516
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatga 166  Q
    ||||||||||||||||||||||  ||| |||||||||||| ||||| |||||  ||||||||||||||| ||||||||    
T  28998593 atacttttactataaatatagactttgaatcagagtaaactttgagatagaggaggctgaaacaagggtttagaatga 28998516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 166
Target Start/End: Complemental strand, 29004309 - 29004232
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatga 166  Q
    ||||||||||||||||||||||  ||| |||||||||||| ||||| |||||  ||||||||||||||| ||||||||    
T  29004309 atacttttactataaatatagactttgaatcagagtaaactttgagatagaggaggctgaaacaagggtttagaatga 29004232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 67 - 163
Target Start/End: Complemental strand, 50079184 - 50079087
Alignment:
Q  67 gatttgtttcaaattt-taagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||| ||||||||| | || ||| |||||||||||||||||||  |||||| || |||||||||||| ||||| |||||||||||||||| |||||    
T  50079184 gatttggttcaaatttatgagggatgcttttactataaatatagacattgtattagtgtaaaccttgagatagagggggctgaaacaagggtttagaa 50079087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 88 - 163
Target Start/End: Complemental strand, 8349390 - 8349314
Alignment:
Q  88 gatacttttactataaatatagatcttgtatcaga-gtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||| ||||| |||||||||||||||||||| ||| | |||||||||| |||||||||||||||||||||| |||||    
T  8349390 gataattttattataaatatagatcttgtattagatgcaaaccttgagatagagagggctgaaacaagggtttagaa 8349314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 163
Target Start/End: Complemental strand, 11457812 - 11457741
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||||||||||  ||||||||| |||||||||||| ||||| |||||||||||| ||| |||||    
T  11457812 cttttactataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaacaatggtttagaa 11457741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 163
Target Start/End: Complemental strand, 17186465 - 17186394
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||| ||||||||||||| ||||||||||| |||||||||| ||||| ||||||||| |||||| |||||    
T  17186465 cttttaatataaatatagattttgtatcagagcaaaccttgagatagagggggctgaaataagggtttagaa 17186394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 88 - 163
Target Start/End: Complemental strand, 31423215 - 31423140
Alignment:
Q  88 gatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||||||||||||    ||||||||| |||||||||||| ||||| |||||||||||||||| |||||    
T  31423215 gatacttttactataaatataagcattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaa 31423140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 155
Target Start/End: Complemental strand, 50077009 - 50076946
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagg 155  Q
    |||||||||||||||||||  ||||||||| |||||||||||| |||| |||||||||||||||    
T  50077009 cttttactataaatatagacattgtatcagtgtaaaccttgagatagaaagggctgaaacaagg 50076946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 93 - 163
Target Start/End: Original strand, 18307054 - 18307124
Alignment:
Q  93 ttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||| |||||||||||||  ||||||||| |||||||||||| ||||| |||||||||||||||| |||||    
T  18307054 ttttgctataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaa 18307124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 93 - 163
Target Start/End: Complemental strand, 25248850 - 25248780
Alignment:
Q  93 ttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||| ||| |||||||||  |||||||||||||||||||||| ||||| |||||||||||||||| |||||    
T  25248850 tttttctagaaatatagactttgtatcagagtaaaccttgagatagagggggctgaaacaagggtttagaa 25248780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 17324009 - 17324074
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggt 157  Q
    |||||| ||||||||||||  |||||| ||||||||||||||| ||||||||||| ||||||||||    
T  17324009 cttttattataaatatagactttgtattagagtaaaccttgagatagagagggctaaaacaagggt 17324074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 83 - 163
Target Start/End: Original strand, 16428588 - 16428668
Alignment:
Q  83 taagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||| |||||||||||||||||||||| | || |||||||| ||||| | || ||||| |||||||||||||||| |||||    
T  16428588 taagggatacttttactataaatataggttttatatcagagcaaaccattagatagagggggctgaaacaagggtttagaa 16428668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 132
Target Start/End: Original strand, 43104099 - 43104143
Alignment:
Q  88 gatacttttactataaatatagatcttgtatcagagtaaaccttg 132  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  43104099 gatacttttactataaatatagaccttgtatcagagtaaaccttg 43104143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 2617460 - 2617531
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||| |||||||||||||| |||||||||||| |||| ||||| |||||  ||||||||||||||| |||||    
T  2617460 ctttcactataaatatagaccttgtatcagagcaaactttgagatagaggaggctgaaacaagggtttagaa 2617531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 31489859 - 31489930
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||||||||||  |||||| || |||||||||||| ||||| ||| |||||||||||| |||||    
T  31489859 cttttactataaatatagacattgtattagtgtaaaccttgagatagagggggttgaaacaagggtttagaa 31489930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 163
Target Start/End: Complemental strand, 6996040 - 6995966
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||||| |||||||||||| |||| ||||||||||| |||||| ||||| |||| ||||||| ||| |||||    
T  6996040 atacttttattataaatatagaccttgaatcagagtaaatcttgagatagagggggccgaaacaacggtttagaa 6995966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 8347608 - 8347535
Alignment:
Q  90 tacttttactataaatatagatcttgtatcaga-gtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||||||||||| ||||| ||||||||||| |||||||||||| ||||| ||| |||||||||||| |||||    
T  8347608 tacttttactataaa-atagaccttgtatcagatgtaaaccttgagatagagggggttgaaacaagggtttagaa 8347535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 163
Target Start/End: Original strand, 20291390 - 20291472
Alignment:
Q  81 tttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||||| |||||||||||||||||||| ||||||| |||| |||  ||||| ||||| | | |||||||||||| |||||    
T  20291390 tttaagcgaaacttttactataaatatagaccttgtattagagcaaattttgagatagagggagatgaaacaagggtttagaa 20291472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 155
Target Start/End: Complemental strand, 9241467 - 9241359
Alignment:
Q  48 aaacgtatttttgggtccagatttgtttcaaattt-taagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctaga-gagggc 145  Q
    ||||||||||||||||| ||||||||| ||| ||| |  | | ||||||||||||||||||||   ||||||||||||||||||| || |||| | ||||    
T  9241467 aaacgtatttttgggtc-agatttgttccaattttatgggggttacttttactataaatataggctttgtatcagagtaaaccttaagatagaggggggc 9241369  T
Q  146 tgaaacaagg 155  Q
    ||||||||||    
T  9241368 tgaaacaagg 9241359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 12302849 - 12302771
Alignment:
Q  90 tacttttactataaatatagatcttgtatcaga-gtaaaccttgagc----tagagagggctgaaacaagggtatagaa 163  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||     ||||| |||||||||||||||| |||||    
T  12302849 tacttttactataaatatagaccttgtatcagatgtaaaccttgagagagatagagggggctgaaacaagggtttagaa 12302771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 140
Target Start/End: Original strand, 16431016 - 16431093
Alignment:
Q  64 ccagatttgtttcaaattt-taagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagag 140  Q
    ||||||||||| ||| ||| | || |||||||||||||||||||||| | ||||||||||| |||||||||| |||||    
T  16431016 ccagatttgttccaattttatgagggatacttttactataaatataggttttgtatcagagcaaaccttgagatagag 16431093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 153
Target Start/End: Complemental strand, 50248909 - 50248848
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaa 153  Q
    |||||||||||||||||||  ||||||||| |||||||||||| ||||| | ||||||||||    
T  50248909 cttttactataaatatagacattgtatcagtgtaaaccttgagatagagggagctgaaacaa 50248848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 165
Target Start/End: Complemental strand, 17324976 - 17324900
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatg 165  Q
    |||||||||||||||||||||| |||| | ||||||||||||  || || || ||||| |||||||||| |||||||    
T  17324976 atacttttactataaatatagaccttgaaccagagtaaacctgaagatacagggggctaaaacaagggtttagaatg 17324900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 163
Target Start/End: Original strand, 47177276 - 47177377
Alignment:
Q  66 agatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagc----tagagagggctgaaacaagggtatag 161  Q
    ||||||||| || |||||||||   |||||||||||||||||||| ||||||||| || |||| |||||     ||||| |||||||||||||||| |||    
T  47177276 agatttgttacagattttaagcaggacttttactataaatatagaccttgtatcaaagcaaactttgagagagatagagggggctgaaacaagggtttag 47177375  T
Q  162 aa 163  Q
    ||    
T  47177376 aa 47177377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 163
Target Start/End: Original strand, 47179627 - 47179728
Alignment:
Q  66 agatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagc----tagagagggctgaaacaagggtatag 161  Q
    ||||||||| || |||||||||   |||||||||||||||||||| ||||||||| || |||| |||||     ||||| |||||||||||||||| |||    
T  47179627 agatttgttacagattttaagcaggacttttactataaatatagaccttgtatcaaagcaaactttgagagagatagagggggctgaaacaagggtttag 47179726  T
Q  162 aa 163  Q
    ||    
T  47179727 aa 47179728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 132
Target Start/End: Original strand, 155618 - 155685
Alignment:
Q  66 agatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcaga-gtaaaccttg 132  Q
    ||||||||||||| |||| || ||| |||||||||||||| || ||||||||||||| ||||||||||    
T  155618 agatttgtttcaatttttgagggatccttttactataaatgtaaatcttgtatcagatgtaaaccttg 155685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 140
Target Start/End: Original strand, 48665112 - 48665163
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaaccttgagctagag 140  Q
    |||||||||||||||||||||| |||| ||||||||||||||| || |||||    
T  48665112 atacttttactataaatatagaccttgaatcagagtaaaccttaagatagag 48665163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 92 - 162
Target Start/End: Original strand, 18839531 - 18839601
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtataga 162  Q
    |||||||||||||||||||  |||||| |  ||||||| |||| ||||| |||||||||||||||| ||||    
T  18839531 cttttactataaatatagacattgtattattgtaaaccatgagatagagggggctgaaacaagggtttaga 18839601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 156
Target Start/End: Original strand, 6756427 - 6756535
Alignment:
Q  48 aaacgtatttttgggtccagatttgtttcaaattt-taagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggct 146  Q
    |||| |||||||||| ||||||||||| ||| ||| | || | ||||||| |||||||||||||  ||||||| | |||||||||||  ||||| || ||    
T  6756427 aaacatatttttggg-ccagatttgttacaattttatgagagttacttttgctataaatatagacattgtatcggtgtaaaccttgaaatagaggggact 6756525  T
Q  147 gaaacaaggg 156  Q
    ||||||||||    
T  6756526 gaaacaaggg 6756535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 134
Target Start/End: Original strand, 24325597 - 24325642
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaaccttgag 134  Q
    |||||||||||||||||||||| |||||||||||| |||| |||||    
T  24325597 atacttttactataaatatagaccttgtatcagagcaaactttgag 24325642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 163
Target Start/End: Complemental strand, 26613603 - 26613503
Alignment:
Q  66 agatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaacctt--gagctagagagggctg-aaacaagggtataga 162  Q
    ||||||||| ||| |||| || ||| ||||| ||||||||||||| |||||||||||  |||||||  ||| ||||| |||||| |||||||||| ||||    
T  26613603 agatttgttccaatttttgagggattcttttgctataaatatagaccttgtatcagatgaaaccttgagagatagagggggctgaaaacaagggtttaga 26613504  T
Q  163 a 163  Q
    |    
T  26613503 a 26613503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 157
Target Start/End: Complemental strand, 2510668 - 2510596
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaaccttgagc----tagagagggctgaaacaagggt 157  Q
    |||||||||||||||||||||| ||||||||||  ||||| |||||     ||||| ||||||||||||||||    
T  2510668 atacttttactataaatatagaccttgtatcaggctaaactttgagagagatagagggggctgaaacaagggt 2510596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 165
Target Start/End: Original strand, 47906205 - 47906287
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaacctt------gagctagagagggctgaaacaagggtatagaatg 165  Q
    |||||||||||||||||||||| ||||||||||  ||||| ||      ||| ||||| |||||||||||||||| |||||||    
T  47906205 atacttttactataaatatagaccttgtatcaggctaaactttgagagagagatagagggggctgaaacaagggtttagaatg 47906287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 140
Target Start/End: Complemental strand, 26520449 - 26520407
Alignment:
Q  98 ctataaatatagatcttgtatcagagtaaaccttgagctagag 140  Q
    |||||||||||||  |||||||||||||||||||||| |||||    
T  26520449 ctataaatatagactttgtatcagagtaaaccttgagatagag 26520407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 134
Target Start/End: Complemental strand, 9459763 - 9459718
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaaccttgag 134  Q
    |||||||||||||||||||||| ||||||||||  ||||| |||||    
T  9459763 atacttttactataaatatagaccttgtatcaggctaaactttgag 9459718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 134
Target Start/End: Complemental strand, 9463590 - 9463545
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaaccttgag 134  Q
    |||||||||||||||||||||| ||||||||||  ||||| |||||    
T  9463590 atacttttactataaatatagaccttgtatcaggctaaactttgag 9463545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 163
Target Start/End: Complemental strand, 31735865 - 31735787
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaacct----tgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||||||||||||| ||||||||||  ||||| |    |||| ||||| ||||| |||||||||| |||||    
T  31735865 atacttttactataaatatagaccttgtatcaggctaaactttgaatgagatagagggggctaaaacaagggtttagaa 31735787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 134
Target Start/End: Complemental strand, 46432068 - 46432023
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaaccttgag 134  Q
    |||||||||||||||||||||| ||||||||||  ||||| |||||    
T  46432068 atacttttactataaatatagaccttgtatcaggctaaactttgag 46432023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 134
Target Start/End: Complemental strand, 15295183 - 15295143
Alignment:
Q  94 tttactataaatatagatcttgtatcagagtaaaccttgag 134  Q
    ||||||||||||||||| |||||||||||| |||| |||||    
T  15295183 tttactataaatatagaccttgtatcagagcaaactttgag 15295143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 163
Target Start/End: Complemental strand, 21948526 - 21948453
Alignment:
Q  94 tttactataaatatagatcttgtatcagagtaaaccttgagc----tagagagggctgaaacaagggtatagaa 163  Q
    ||||||||||||||||| ||||||||| | ||||| |||||     ||||| |||||||||||||||| |||||    
T  21948526 tttactataaatatagaccttgtatcatactaaactttgagagagatagagggggctgaaacaagggtttagaa 21948453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 163
Target Start/End: Original strand, 39932017 - 39932088
Alignment:
Q  94 tttactataaatatagatcttgtatcagagtaaacctt--gagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||||||||||||| ||||||| |||  |||| ||  ||| ||||| |||||||||||||||| |||||    
T  39932017 tttactataaatatagaccttgtatgagacaaaactttgagagatagagggggctgaaacaagggtttagaa 39932088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0339 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 15 - 163
Target Start/End: Original strand, 3873 - 4021
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatctt 114  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||    
T  3873 gtggcacgatggtgcgatggcagcgaataacataaacgtatttttgggtgcagatttgtttcaaattttaagcaatacttttactataaatatagacctt 3972  T
Q  115 gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||| ||||| ||||| ||||| |||||||||||||||| |||||    
T  3973 gtatcagactaaactttgagatagagggggctgaaacaagggtttagaa 4021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 109; Significance: 6e-55; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 15 - 163
Target Start/End: Original strand, 2756 - 2904
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatctt 114  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||| |||    
T  2756 gtggcacgatggtgcgctggcagcgaataacataaacgtatttttgggtgcagatttgttccaaattttaagcgaaacttttactataaatatagaactt 2855  T
Q  115 gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||||| |||| ||||| ||||| |||||||||||||||| |||||    
T  2856 gtatcagagcaaactttgagatagagggggctgaaacaagggtttagaa 2904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 109; Significance: 6e-55; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 15 - 163
Target Start/End: Complemental strand, 27306641 - 27306493
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatctt 114  Q
    |||||||||||||||| | ||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  27306641 gtggcacgatggtgcgctagcagcgaataacagaaacgtatttttgggtgcagatttgttccaaattttaagcgatacttttactataaatatagacctt 27306542  T
Q  115 gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||||| ||||| ||||| |||||||||||||||| |||||    
T  27306541 gtatcagagtaaactttgagatagagggggctgaaacaagggtttagaa 27306493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 44427 - 44589
Alignment:
Q  1 gatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttacta 100  Q
    ||||||||| ||  |||||||||||||||| ||||||| |||||||||||| ||||||||||| |||||||||  |||||||||||||||||||||||||    
T  44427 gatggggtcgcatcgtggcacgatggtgcgctggcagcaaataacataaacatatttttgggtgcagatttgtaccaaattttaagcgatacttttacta 44526  T
Q  101 taaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||| |||||||||||| |||| ||||| ||||| |||||||||||||||| |||||    
T  44527 taaatatagaccttgtatcagagcaaactttgagatagagggggctgaaacaagggtttagaa 44589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 35492 - 35648
Alignment:
Q  1 gatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttacta 100  Q
    ||||||||| ||  ||||| |||| ||||| ||||||| |||| || |||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  35492 gatggggtcgcatcgtggcccgatcgtgcgctggcagcaaatagcagaaacgtatttttgggtgcagatttgttccaaattttaagcgatacttttacta 35591  T
Q  101 taaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggt 157  Q
    |||||||||| |||||||||||| |||| ||||| ||||| ||||||||||||||||    
T  35592 taaatatagaccttgtatcagagcaaactttgagatagagggggctgaaacaagggt 35648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 15 - 163
Target Start/End: Complemental strand, 1049707 - 1049559
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatctt 114  Q
    ||||||||| |||||| |||| |||||||||| |||||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||| |||    
T  1049707 gtggcacgaaggtgcgctggcggcgaataacagaaacgtatttttgggtgcagatttgttccaaattttaagcgaaacttttactataaatatagacctt 1049608  T
Q  115 gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||| |||| |||| ||||| ||||| |||||||||||||||| |||||    
T  1049607 gtattagagcaaactttgagatagagggggctgaaacaagggtttagaa 1049559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 18567476 - 18567638
Alignment:
Q  1 gatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttg-ggtccagatttgtttcaaattttaagcgatacttttact 99  Q
    |||||||||||||  ||||||||||||||| ||||| ||||||||| ||||||||||||  ||| || ||| ||| ||||||||||||||||||||||||    
T  18567476 gatggggtcacaacttggcacgatggtgcgctggcaacgaataacagaaacgtatttttttggtgcaaatt-gttccaaattttaagcgatacttttact 18567574  T
Q  100 ataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||||||||||||||||||||||||| ||||| ||||  |||||||||||||||| |||||    
T  18567575 ataaatatagatcttgtatcagagtaaactttgagatagaaggggctgaaacaagggtttagaa 18567638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 31435473 - 31435311
Alignment:
Q  1 gatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttg-ggtccagatttgtttcaaattttaagcgatacttttact 99  Q
    |||||||||||||  ||||||||||||||| ||||| ||||||||| ||||||||||||  ||| || ||| ||| ||||||||||||||||||||||||    
T  31435473 gatggggtcacaacttggcacgatggtgcgctggcaacgaataacagaaacgtatttttttggtgcaaatt-gttccaaattttaagcgatacttttact 31435375  T
Q  100 ataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||||||||||||||||||||||||| ||||| ||||  |||||||||||||||| |||||    
T  31435374 ataaatatagatcttgtatcagagtaaactttgagatagaaggggctgaaacaagggtttagaa 31435311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 15 - 163
Target Start/End: Original strand, 26804451 - 26804594
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatctt 114  Q
    |||||||||||||||| ||||||| ||||||| ||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  26804451 gtggcacgatggtgcgctggcagcaaataacagaaacgtatttt-gggtgcagatttgttccaaattttaagcgatacttttactataaatatagacctt 26804549  T
Q  115 gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||    |||||||| ||||| ||||| |||||||||||||||| |||||    
T  26804550 gt----gagtaaactttgagatagagggggctgaaacaagggtttagaa 26804594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 3878435 - 3878602
Alignment:
Q  1 gatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttacta 100  Q
    ||||||||| ||  ||||||||||||| || ||||||||||||||| ||||||||||| |||| |||||||||| |||||||||||||||||||||||||    
T  3878435 gatggggtcgcatcgtggcacgatggtacgctggcagcgaataacagaaacgtatttt-gggtgcagatttgttccaaattttaagcgatacttttacta 3878533  T
Q  101 ta----aatatagatcttgtatcagagtaaacctt--gagctagagagggctgaaacaagggtatagaa 163  Q
    ||    |||||||| |||||||||||| |||| ||  ||| ||||| |||||||||||||||| |||||    
T  3878534 taaattaatatagaccttgtatcagagcaaactttgagagatagagggggctgaaacaagggtttagaa 3878602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 22392336 - 22392492
Alignment:
Q  1 gatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttacta 100  Q
    |||||| || ||| |||| ||||||||||| |||  || || |||| ||| ||||||||  || |||||||||| |||||| ||||||||||||||||||    
T  22392336 gatgggatcgcaacgtggtacgatggtgcgctggaggcaaaaaacagaaatgtatttttcagtgcagatttgttccaaattgtaagcgatacttttacta 22392435  T
Q  101 taaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggt 157  Q
    |||||||||| ||||||||||||||||| ||||| ||||| ||||||||||||||||    
T  22392436 taaatatagaccttgtatcagagtaaactttgagatagagggggctgaaacaagggt 22392492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 15 - 163
Target Start/End: Original strand, 25542407 - 25542555
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgg-gtccagatttgtttcaaattttaagcgatacttttactataaatatagatct 113  Q
    |||||||||||||||| |||||||||| |||| |||| ||||||| | ||  |||||| || |||||||||||||| |||||||||||||||||||| ||    
T  25542407 gtggcacgatggtgcgctggcagcgaaaaacagaaacatattttttgagtgtagatttattccaaattttaagcgaaacttttactataaatatagacct 25542506  T
Q  114 tgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||| |||| ||||| ||||| |||||||||||| ||| |||||    
T  25542507 tgtatcagagcaaactttgagatagag-gggctgaaacaaaggtttagaa 25542555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 41 - 163
Target Start/End: Original strand, 7188445 - 7188568
Alignment:
Q  41 ataacataaacgtatttttgggtccagatttgtttcaaattt-taagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctaga 139  Q
    ||||||||||||||||||||||   ||||||||| ||| ||| | || |||||||||||||||||||||||  |||||||||||||||||||||| ||||    
T  7188445 ataacataaacgtatttttgggctgagatttgttccaattttatgagggatacttttactataaatatagactttgtatcagagtaaaccttgagataga 7188544  T
Q  140 gagggctgaaacaagggtatagaa 163  Q
    | |||||||||||||||| |||||    
T  7188545 gggggctgaaacaagggtttagaa 7188568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 163
Target Start/End: Complemental strand, 40837155 - 40837006
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgg-gtccagatttgtttcaaattttaagcgatacttttactataaatatagatct 113  Q
    |||||||||||||| | |||||||||| || | |||| ||||||| | || |||||||||| ||||||||||| || |||||||||||||||||||| ||    
T  40837155 gtggcacgatggtgtgctggcagcgaaaaatagaaacatattttttgagtgcagatttgttccaaattttaagggaaacttttactataaatatagacct 40837056  T
Q  114 tgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||| |||  | ||| | ||| ||||||||| |||||| |||||    
T  40837055 tgtatcagagcaaatttggagattgagggggctgaaagaagggtttagaa 40837006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 89 - 166
Target Start/End: Complemental strand, 42331337 - 42331260
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatga 166  Q
    ||||||||||||||||||||||  |||||||||| ||||| ||||| ||||| |||||||||||||||| ||||||||    
T  42331337 atacttttactataaatatagactttgtatcagactaaactttgagatagagggggctgaaacaagggtttagaatga 42331260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 89 - 165
Target Start/End: Complemental strand, 13099814 - 13099738
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatg 165  Q
    |||||||||||||||||||||| |||| |||| ||||||||||||| ||||| ||| |||||||||||| |||||||    
T  13099814 atacttttactataaatatagaccttgaatcaaagtaaaccttgagatagagggggttgaaacaagggtttagaatg 13099738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 75 - 163
Target Start/End: Complemental strand, 22251894 - 22251806
Alignment:
Q  75 tcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||||||||||| |||||||||||||||||| | |||| |||||||||||| ||||| |||||  |||||||||||| || |||||    
T  22251894 tcaaattttaagcgacacttttactataaatataaaccttgaatcagagtaaactttgagatagaggaggctgaaacaagagtttagaa 22251806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 21678020 - 21678091
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||||||||||| ||||||||  |||||||||||| ||||| |||||||||||||||| |||||    
T  21678020 cttttactataaatatagatattgtatcaatgtaaaccttgagatagagggggctgaaacaagggtttagaa 21678091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 166
Target Start/End: Original strand, 21990106 - 21990178
Alignment:
Q  93 ttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatga 166  Q
    |||||||||||||||||| |||| |||||||||||||| ||| ||||| |||||||||||||||| ||||||||    
T  21990106 ttttactataaatatagaccttgaatcagagtaaacctggagatagag-gggctgaaacaagggtttagaatga 21990178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 43 - 163
Target Start/End: Complemental strand, 22829018 - 22828897
Alignment:
Q  43 aacataaacgtatttttgggtccagatttgtttcaaattt-taagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagaga 141  Q
    |||| ||||||||||| ||| | ||||||||| ||  ||| | || ||||||||||||||||||||||   ||||||| |||||||||||||| |||||     
T  22829018 aacagaaacgtattttcgggcctagatttgttccagttttatgagggatacttttactataaatataggctttgtatccgagtaaaccttgagatagagg 22828919  T
Q  142 gggctgaaacaagggtatagaa 163  Q
    ||||||||||||| || |||||    
T  22828918 gggctgaaacaagagtttagaa 22828897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 48 - 163
Target Start/End: Original strand, 11355168 - 11355283
Alignment:
Q  48 aaacgtatttttgggtccagatttgtttcaaattt-taagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggct 146  Q
    ||||||||||||||| || |||||  ||| ||||| | || ||| ||||||||||||||||||   ||||||||| |||||||||||| ||||| |||||    
T  11355168 aaacgtatttttggg-cctgattttgttccaatttatgagggattcttttactataaatataggctttgtatcagtgtaaaccttgagatagagggggct 11355266  T
Q  147 gaaacaagggtatagaa 163  Q
    ||||||||||| |||||    
T  11355267 gaaacaagggtttagaa 11355283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 20091926 - 20091818
Alignment:
Q  43 aacataaacgtatttttgggtccagatttgtttcaaattt-taagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagaga 141  Q
    |||| |||||||||||  || | ||||||||| ||| ||| | || |||||||||||||||||||||||  || ||||||||||||||||||| |||||     
T  20091926 aacagaaacgtattttcaggcctagatttgttccaattttatgagggatacttttactataaatatagactttttatcagagtaaaccttgagatagagg 20091827  T
Q  142 gggctgaaa 150  Q
    |||||||||    
T  20091826 gggctgaaa 20091818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 48 - 163
Target Start/End: Complemental strand, 20137488 - 20137373
Alignment:
Q  48 aaacgtatttttgggtccagatttgtttcaaattt-taagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggct 146  Q
    ||||||||||||||| || |||||  ||| ||||| | || ||| |||||||||||||||| |   |||||||||||||||||||||| ||||| |||||    
T  20137488 aaacgtatttttggg-cctgattttgttccaatttatgagggattcttttactataaatattggctttgtatcagagtaaaccttgagatagagggggct 20137390  T
Q  147 gaaacaagggtatagaa 163  Q
    ||||||||||| |||||    
T  20137389 gaaacaagggtttagaa 20137373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 163
Target Start/End: Complemental strand, 31156271 - 31156175
Alignment:
Q  68 atttgtttcaaattt-taagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||| ||||||| | ||| |||||||||||||||||||||| |||||||||  | |||| ||||| ||||| |||||||||||||||| |||||    
T  31156271 atttgttccaaatttatgagctatacttttactataaatatagagcttgtatcaaggcaaactttgagatagagggggctgaaacaagggtttagaa 31156175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 93 - 165
Target Start/End: Complemental strand, 37412462 - 37412390
Alignment:
Q  93 ttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatg 165  Q
    |||||||||||||||||| |||| |||||||||||||| ||| || || |||||||||||||||| |||||||    
T  37412462 ttttactataaatatagaccttgaatcagagtaaacctggagatatagggggctgaaacaagggtttagaatg 37412390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 166
Target Start/End: Complemental strand, 4296271 - 4296196
Alignment:
Q  92 cttttactataaatatagatctt-gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatga 166  Q
    |||||||||||||||||||  || ||||||| |||||||||||| ||||| |||||||||||||||| ||||||||    
T  4296271 cttttactataaatatagacatttgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaatga 4296196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 21679981 - 21680052
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||||||||||  |||||| || |||||||||||| ||||| |||||||||||||||| |||||    
T  21679981 cttttactataaatatagacattgtattagtgtaaaccttgagatagagggggctgaaacaagggtttagaa 21680052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 98 - 163
Target Start/End: Original strand, 24258423 - 24258488
Alignment:
Q  98 ctataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||| | |||||||||||||||| ||||| ||||| |||||||||||||||| |||||    
T  24258423 ctataaatataggttttgtatcagagtaaacattgagatagagggggctgaaacaagggtttagaa 24258488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 165
Target Start/End: Original strand, 443546 - 443622
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatg 165  Q
    ||||||||||||||||||||||  ||| |||||||||||||||||| ||||| | ||| |||||| ||| |||||||    
T  443546 atacttttactataaatatagactttgaatcagagtaaaccttgagatagagggagctaaaacaatggtttagaatg 443622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 3677235 - 3677298
Alignment:
Q  93 ttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggt 157  Q
    ||||||||||||||||||||||| |||||||||||| | ||| ||||| ||||||||||||||||    
T  3677235 ttttactataaatatagatcttgaatcagagtaaacttggagatagag-gggctgaaacaagggt 3677298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 118
Target Start/End: Original strand, 45366446 - 45366526
Alignment:
Q  38 cgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatcttgtat 118  Q
    |||| |||| ||||||||||||  || |||||||||| ||||||||||| | ||||||||||||||||||| | |||||||    
T  45366446 cgaaaaacagaaacgtatttttcagtgcagatttgttccaaattttaagggttacttttactataaatataaaccttgtat 45366526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 93 - 163
Target Start/End: Original strand, 24465503 - 24465574
Alignment:
Q  93 ttttactataaatatagatcttgtatcaga-gtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||| |||||||  |||||||||| |||||||||||| ||||| |||||||||||||||| |||||    
T  24465503 ttttactatagatatagactttgtatcagatgtaaaccttgagatagagggggctgaaacaagggtttagaa 24465574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 44724533 - 44724604
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||||||||||  ||||||||| |||||||| ||| || || |||||||||||||||| |||||    
T  44724533 cttttactataaatatagacattgtatcagtgtaaacctggagatatagggggctgaaacaagggtttagaa 44724604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 163
Target Start/End: Complemental strand, 24817682 - 24817613
Alignment:
Q  94 tttactataaatatagatcttgtatcaga-gtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||| |||||||||||| ||||||||||| |||||||||||| ||||| |||||||||||||||| |||||    
T  24817682 tttaatataaatatagaccttgtatcagatgtaaaccttgagatagag-gggctgaaacaagggtttagaa 24817613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 30906389 - 30906327
Alignment:
Q  88 gatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaa 150  Q
    ||||||||| ||||||||||||| ||||||| |||||||| |||||| ||||| |||||||||    
T  30906389 gatacttttgctataaatatagaccttgtataagagtaaatcttgagatagagggggctgaaa 30906327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 92 - 162
Target Start/End: Complemental strand, 39146322 - 39146252
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtataga 162  Q
    |||||||||||||||||||   |||||||| |||||||||||| | ||| |||||||||||||||| ||||    
T  39146322 cttttactataaatatagacactgtatcagtgtaaaccttgagatggagggggctgaaacaagggtttaga 39146252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 92 - 165
Target Start/End: Original strand, 42223110 - 42223184
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctaga-gagggctgaaacaagggtatagaatg 165  Q
    ||||||||||||||||||   |||||||||||||||||||||| |||| | ||| |||||||||||| |||||||    
T  42223110 cttttactataaatataggctttgtatcagagtaaaccttgagatagatgtgggatgaaacaagggtttagaatg 42223184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 122
Target Start/End: Complemental strand, 6067576 - 6067497
Alignment:
Q  43 aacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcaga 122  Q
    ||||||||| |||||||||| |  |||||||| ||| |||| || ||| ||||||||||||||||| ||| |||||||||    
T  6067576 aacataaacatatttttgggcctggatttgttccaattttttagggatgcttttactataaatataaatcctgtatcaga 6067497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 24748548 - 24748619
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||| ||||||||||||  ||||||||| |||||| ||||  ||||| |||||||||||||||| |||||    
T  24748548 cttttattataaatatagacattgtatcagtgtaaactttgacttagagggggctgaaacaagggtttagaa 24748619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 157
Target Start/End: Original strand, 6332176 - 6332245
Alignment:
Q  88 gatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggct-gaaacaagggt 157  Q
    ||||||||||||||||||||| | ||||||||||||| |||||||||  |||| ||||| |||||||||||    
T  6332176 gatacttttactataaatataaaacttgtatcagagt-aaccttgagagagagggggctggaaacaagggt 6332245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 163
Target Start/End: Original strand, 3035668 - 3035746
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaaccttgagc----tagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||||||||||||| ||||||||||  ||||| |||||     ||||| |||||||||||||||| |||||    
T  3035668 atacttttactataaatatagaccttgtatcaggctaaactttgagagagatagagggggctgaaacaagggtttagaa 3035746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 166
Target Start/End: Original strand, 9679009 - 9679087
Alignment:
Q  93 ttttactataaatatagatcttgtatcaga-gtaaaccttgagc----tagagagggctgaaacaagggtatagaatga 166  Q
    |||||||||||||||||||||||||||||| |||||| |||||     ||||| |||||||||||||| | ||||||||    
T  9679009 ttttactataaatatagatcttgtatcagatgtaaactttgagagagatagagggggctgaaacaaggatctagaatga 9679087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 163
Target Start/End: Original strand, 38393933 - 38394011
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaaccttgagc----tagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||||||||||||| ||||||||||  ||||| |||||     ||||| |||||||||||||||| |||||    
T  38393933 atacttttactataaatatagaccttgtatcaggctaaactttgagagagatagagggggctgaaacaagggtttagaa 38394011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 141
Target Start/End: Original strand, 1606421 - 1606473
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaaccttgagctagaga 141  Q
    |||||||||||||||||||||| ||||||||| || |||| ||||| ||||||    
T  1606421 atacttttactataaatatagaccttgtatcaaagcaaactttgagatagaga 1606473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 163
Target Start/End: Complemental strand, 7470359 - 7470286
Alignment:
Q  94 tttactataaatatagatcttgtatcagagtaaaccttgagc----tagagagggctgaaacaagggtatagaa 163  Q
    ||||||||||||||||| ||||||||||| ||||| |||||     ||||| |||||||||||||||| |||||    
T  7470359 tttactataaatatagaccttgtatcagactaaactttgagagagatagagggggctgaaacaagggtttagaa 7470286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 163
Target Start/End: Complemental strand, 7472317 - 7472244
Alignment:
Q  94 tttactataaatatagatcttgtatcagagtaaaccttgagc----tagagagggctgaaacaagggtatagaa 163  Q
    ||||||||||||||||| ||||||||||| ||||| |||||     ||||| |||||||||||||||| |||||    
T  7472317 tttactataaatatagaccttgtatcagactaaactttgagagagatagagggggctgaaacaagggtttagaa 7472244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 166
Target Start/End: Complemental strand, 7092512 - 7092436
Alignment:
Q  94 tttactataaatatagatcttgtatcagagtaaacctt----gagctagagagggctgaaacaagggtatagaatga 166  Q
    ||||||||||||||||| |||||||||||| |||| ||    ||| | ||| |||||||||||||||| ||||||||    
T  7092512 tttactataaatatagaccttgtatcagagcaaactttgagagagatggagggggctgaaacaagggtttagaatga 7092436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 9680768 - 9680844
Alignment:
Q  92 cttttactataaatatagatcttgtatcaga-gtaaaccttgagc----tagagagggctgaaacaagggtatagaa 163  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||     ||||| ||| |||||||||||| |||||    
T  9680768 cttttactataaatatagaccttgtatcagatgtaaaccttgagagagatagagggggttgaaacaagggtttagaa 9680844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 165
Target Start/End: Complemental strand, 7094759 - 7094684
Alignment:
Q  94 tttactataaatatagatcttgtatcagagtaaaccttgagc----tagagagggctgaaacaagggtatagaatg 165  Q
    |||| |||||||||||| |||||||||||| |||| |||||     ||||| |||||||||||||||| |||||||    
T  7094759 tttattataaatatagaccttgtatcagagcaaactttgagagagatagagggggctgaaacaagggtttagaatg 7094684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 156
Target Start/End: Original strand, 11757175 - 11757246
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaaccttgagc----tagagagggctgaaacaaggg 156  Q
    |||||||||||||||||||||| ||||||||||  ||||| |||||     ||||| |||||||||||||||    
T  11757175 atacttttactataaatatagaccttgtatcaggctaaactttgagagagatagagggggctgaaacaaggg 11757246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 156
Target Start/End: Original strand, 20299405 - 20299476
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaaccttgagc----tagagagggctgaaacaaggg 156  Q
    |||||||||||||||||||||| ||||||||||  ||||| |||||     ||||| |||||||||||||||    
T  20299405 atacttttactataaatatagaccttgtatcaggctaaactttgagagagatagagggggctgaaacaaggg 20299476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 27832969 - 27832903
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagg-gctgaaacaagggt 157  Q
    |||||||||||||||||| |  |||||||||| |||||||| | ||||| || ||||||||||||||    
T  27832969 cttttactataaatataggttgtgtatcagagcaaaccttgtgatagagtggagctgaaacaagggt 27832903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 134
Target Start/End: Complemental strand, 7349617 - 7349572
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaaccttgag 134  Q
    |||||||||||||||||||||| ||||||||||  ||||| |||||    
T  7349617 atacttttactataaatatagaccttgtatcaggctaaactttgag 7349572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 65 - 134
Target Start/End: Original strand, 22108088 - 22108157
Alignment:
Q  65 cagatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgag 134  Q
    ||||||||||  | |||||||||   |||||||||||||||||||| ||||||||| || |||| |||||    
T  22108088 cagatttgttatagattttaagcaggacttttactataaatatagaccttgtatcaaagcaaactttgag 22108157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 65 - 134
Target Start/End: Original strand, 22137099 - 22137168
Alignment:
Q  65 cagatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgag 134  Q
    ||||||||||  | |||||||||   |||||||||||||||||||| ||||||||| || |||| |||||    
T  22137099 cagatttgttatagattttaagcaggacttttactataaatatagaccttgtatcaaagcaaactttgag 22137168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 134
Target Start/End: Original strand, 28485513 - 28485558
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaaccttgag 134  Q
    |||||||||||||||||||||| ||||||||||  ||||| |||||    
T  28485513 atacttttactataaatatagaccttgtatcaggctaaactttgag 28485558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 65 - 134
Target Start/End: Original strand, 40549848 - 40549917
Alignment:
Q  65 cagatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgag 134  Q
    ||||||||||  | |||||||||   |||||||||||||||||||| ||||||||| || |||| |||||    
T  40549848 cagatttgttatagattttaagcaggacttttactataaatatagaccttgtatcaaagcaaactttgag 40549917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 65 - 134
Target Start/End: Original strand, 40552126 - 40552195
Alignment:
Q  65 cagatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgag 134  Q
    ||||||||||  | |||||||||   |||||||||||||||||||| ||||||||| || |||| |||||    
T  40552126 cagatttgttatagattttaagcaggacttttactataaatatagaccttgtatcaaagcaaactttgag 40552195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 108
Target Start/End: Original strand, 42006444 - 42006535
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatata 108  Q
    ||||||||||||| |||||  ||  |||||||||||||||||||  | |  ||||||||| || |||||||| | |||||||||||||||||||    
T  42006444 gtggcacgatggtacgttga-aggaaataacataaacgtattttcag-tgaagatttgttccatattttaagggttacttttactataaatata 42006535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 134
Target Start/End: Complemental strand, 43253862 - 43253817
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaaccttgag 134  Q
    |||||||||||||||||||||| ||||||||||  ||||| |||||    
T  43253862 atacttttactataaatatagaccttgtatcaggctaaactttgag 43253817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 121
Target Start/End: Original strand, 18345488 - 18345520
Alignment:
Q  89 atacttttactataaatatagatcttgtatcag 121  Q
    |||||||||||||||||||||| ||||||||||    
T  18345488 atacttttactataaatatagaccttgtatcag 18345520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 121
Target Start/End: Original strand, 38396237 - 38396269
Alignment:
Q  89 atacttttactataaatatagatcttgtatcag 121  Q
    |||||||||||||||||||||| ||||||||||    
T  38396237 atacttttactataaatatagaccttgtatcag 38396269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 48457601 - 48457678
Alignment:
Q  90 tacttttactataaatatagatcttgtatcagagtaaaccttgagc----tagagagggctgaaacaagggtatagaa 163  Q
    |||||| |||||||||||||| ||||||||||  ||||| |||||     ||||| |||||||||||||||| |||||    
T  48457601 tactttcactataaatatagaccttgtatcaggctaaactttgagagagatagagggggctgaaacaagggtttagaa 48457678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 108; Significance: 2e-54; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 15 - 166
Target Start/End: Complemental strand, 36402739 - 36402589
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatctt 114  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  36402739 gtggcacgatggtgcgttggcaacgaataacagaaacgtatttttgggtgcagatttgtt-caaattttaagcgatacttttactataaatatagacctt 36402641  T
Q  115 gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatga 166  Q
     ||||||||||||| ||||| ||||| |||||||||||||||| ||||||||    
T  36402640 atatcagagtaaacgttgagatagagggggctgaaacaagggtttagaatga 36402589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 15 - 163
Target Start/End: Complemental strand, 25921885 - 25921737
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatctt 114  Q
    |||||||||||||||| || |||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  25921885 gtggcacgatggtgcgctgacagcgaataacagaaacgtatttttgggtgcagatttgttccaaattttaagcgatacttttactataaatatagacctt 25921786  T
Q  115 gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||||| |||| ||||| ||||| |||||||||||||||| |||||    
T  25921785 gtatcagagcaaactttgagatagagggggctgaaacaagggtttagaa 25921737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 15 - 166
Target Start/End: Complemental strand, 12556335 - 12556184
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatctt 114  Q
    ||||||||||| |||| ||||||||||||||| ||| ||||||||| || ||||||||||||||| |||||||||||||||||||||||||||||| |||    
T  12556335 gtggcacgatgatgcgctggcagcgaataacagaaatgtatttttgtgtacagatttgtttcaaaatttaagcgatacttttactataaatatagacctt 12556236  T
Q  115 gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatga 166  Q
    |||||||||||||| ||||| ||||| ||||||||| |||||| ||||||||    
T  12556235 gtatcagagtaaactttgagatagagggggctgaaataagggtttagaatga 12556184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 32 - 163
Target Start/End: Complemental strand, 2818731 - 2818600
Alignment:
Q  32 tggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaacctt 131  Q
    ||||||||||||||| ||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||    
T  2818731 tggcagcgaataacaaaaacgtattttcgggtgcagatttgttccaaattttaagcgatacttttactataaatatagaccttgtatcagagtaaacttt 2818632  T
Q  132 gagctagagagggctgaaacaagggtatagaa 163  Q
    ||| ||||| |||||||||||||||| |||||    
T  2818631 gagatagagggggctgaaacaagggtttagaa 2818600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 16 - 163
Target Start/End: Complemental strand, 20507873 - 20507726
Alignment:
Q  16 tggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatcttg 115  Q
    |||||||| |||||| | ||||||||||||| |||| ||||||||||  |||||||||| |||  |||||||||||||||||||||||||||||||||||    
T  20507873 tggcacgaaggtgcgctagcagcgaataacagaaacatatttttgggagcagatttgttccaagatttaagcgatacttttactataaatatagatcttg 20507774  T
Q  116 tatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||||||||| ||||| ||||| |||||||||||||||| |||||    
T  20507773 tatcagagtaaactttgagatagagggggctgaaacaagggtttagaa 20507726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 38881958 - 38882121
Alignment:
Q  1 gatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttacta 100  Q
    ||||||||| ||  |||||||||||||||| |||| |||||||||| |||||||||||||||| |||||||||| |||||||||||||| ||||||||||    
T  38881958 gatggggtcgcatcgtggcacgatggtgcgctggcggcgaataacagaaacgtatttttgggtgcagatttgttccaaattttaagcgaaacttttacta 38882057  T
Q  101 taaatatagatcttgtatcagagtaaaccttgagctaga-gagggctgaaacaagggtatagaa 163  Q
    |||||||||| |||||||||||| |||| | ||| |||| | |||||||||||||||| |||||    
T  38882058 taaatatagaccttgtatcagagcaaacttggagatagaggggggctgaaacaagggtttagaa 38882121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 15 - 163
Target Start/End: Original strand, 21947897 - 21948041
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatctt 114  Q
    ||||||||||||||   ||||||||||||||| |||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  21947897 gtggcacgatggtg---tggcagcgaataacagaaacatatttttgggtgcagatttgttccaaattttaagcgatacttttactataaatatagacctt 21947993  T
Q  115 gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||||  ||||| ||||| |||||||||||||||| |||||    
T  21947994 gtatcagagtaaattttgagatagag-gggctgaaacaagggtttagaa 21948041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 15 - 163
Target Start/End: Original strand, 6756361 - 6756509
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatctt 114  Q
    |||||||||||||||| ||||||||||||||| |||||||||||| ||| ||||||| || |||||||||||  ||||||||||||| ||||||||||||    
T  6756361 gtggcacgatggtgcgctggcagcgaataacagaaacgtattttttggtgcagatttattccaaattttaagttatacttttactattaatatagatctt 6756460  T
Q  115 gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||| | ||||| ||||| ||||| | |||||||||| ||| |||||    
T  6756461 gtatcatattaaactttgagatagagggagctgaaacaatggtttagaa 6756509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 16776010 - 16776167
Alignment:
Q  1 gatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttacta 100  Q
    ||||||||| ||  |||||||||||||||| ||||| |||| |||| |||| |||||||| ||  ||||||||| |||||||||||||||||||||||||    
T  16776010 gatggggtcgcatcgtggcacgatggtgcgctggcatcgaaaaacagaaacatatttttgagtgaagatttgttccaaattttaagcgatacttttacta 16776109  T
Q  101 t-aaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggt 157  Q
    | ||||||||| |||||||| ||| |||| ||||| ||||| ||||||||||||||||    
T  16776110 taaaatatagaccttgtatctgagcaaactttgagatagagggggctgaaacaagggt 16776167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 16 - 153
Target Start/End: Complemental strand, 31466389 - 31466252
Alignment:
Q  16 tggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatcttg 115  Q
    ||||||||||||||  |||||| ||||| |||||| |||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||| ||||    
T  31466389 tggcacgatggtgcactggcagggaataccataaatgtatttttgggtgcagatttgttccaaattttaagcgacacttttactataaatatagaccttg 31466290  T
Q  116 tatcagagtaaaccttgagctagagagggctgaaacaa 153  Q
    ||||||| ||||| ||||| || |  ||||||||||||    
T  31466289 tatcagactaaactttgagataaaaggggctgaaacaa 31466252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 15 - 163
Target Start/End: Original strand, 2174786 - 2174934
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatctt 114  Q
    |||||||||||||||  |||||||||| |||| |||| |||||||| || |||||||||| ||||||||||||||| ||||||||||||||| ||  |||    
T  2174786 gtggcacgatggtgcactggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagcgatgcttttactataaatacaggcctt 2174885  T
Q  115 gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||||| |||| | ||| ||||| |||||||||||||||| |||||    
T  2174886 gtatcagagcaaacttggagatagagggggctgaaacaagggtttagaa 2174934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 15 - 163
Target Start/End: Original strand, 4236497 - 4236644
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatctt 114  Q
    |||||||||||||||| |||||| ||| |||| ||||||||||| | || |||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  4236497 gtggcacgatggtgcgctggcagggaaaaacagaaacgtatttt-gagtgcagatttgttccaaattttaagcgatacttttactataaatatagacctt 4236595  T
Q  115 gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||||| |||| | ||| || || ||||||||||||| || |||||    
T  4236596 gtatcagagcaaacttggagataaagggggctgaaacaagagtttagaa 4236644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 16 - 128
Target Start/End: Original strand, 39797956 - 39798068
Alignment:
Q  16 tggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatcttg 115  Q
    ||||||||||||||| ||||||||||||||| |||| ||||||||||| |||||||||| |||||||||||| | |||||||||||||||||||| ||||    
T  39797956 tggcacgatggtgcgctggcagcgaataacagaaacatatttttgggtgcagatttgttccaaattttaagcaaaacttttactataaatatagaccttg 39798055  T
Q  116 tatcagagtaaac 128  Q
    ||| |||||||||    
T  39798056 tattagagtaaac 39798068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 21684887 - 21684754
Alignment:
Q  1 gatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttacta 100  Q
    ||||||||| ||  |||||||||||||||| |||||||||| |||| |||| |||||||| || |||||||||| |||||||||||| | ||||||||||    
T  21684887 gatggggtcgcatcgtggcacgatggtgcgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttacaaattttaagcaaaacttttacta 21684788  T
Q  101 taaatatagatcttgtatcagagtaaaccttgag 134  Q
    |||||||||| ||||||||||  ||||| |||||    
T  21684787 taaatatagaccttgtatcaggctaaactttgag 21684754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 65 - 163
Target Start/End: Original strand, 31542652 - 31542750
Alignment:
Q  65 cagatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||| || ||||||||| | |||||||||||||||||||| ||||||||| || |||| ||||| ||||| |||||||||||||||| |||||    
T  31542652 cagatttgttacagattttaagcaagacttttactataaatatagaccttgtatcaaagcaaactttgagatagagggggctgaaacaagggtttagaa 31542750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 89 - 160
Target Start/End: Original strand, 18596588 - 18596659
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtata 160  Q
    |||||||||||||||||||||| |||| |||||||||||||||| | ||||| |||||||||||||||||||    
T  18596588 atacttttactataaatatagaccttgaatcagagtaaaccttgggatagagggggctgaaacaagggtata 18596659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 89 - 164
Target Start/End: Complemental strand, 41586044 - 41585969
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaat 164  Q
    ||||||||||||||||||||| | |||||||||||||||||||||| || || |||||||||||||||| ||||||    
T  41586044 atacttttactataaatataggttttgtatcagagtaaaccttgagataaagggggctgaaacaagggtttagaat 41585969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 97 - 163
Target Start/End: Complemental strand, 6661512 - 6661446
Alignment:
Q  97 actataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||| |||||    
T  6661512 actataaatatagaccttgtatcagagtaaaccttgagatagagagggttgaaacaagggtttagaa 6661446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 65 - 163
Target Start/End: Original strand, 31544997 - 31545095
Alignment:
Q  65 cagatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||| || ||||||||| | |||||||||||||||||||| ||||||||| || |||| ||||| || || |||||||||||||||| |||||    
T  31544997 cagatttgttacagattttaagcaagacttttactataaatatagaccttgtatcaaagcaaactttgagataaagggggctgaaacaagggtttagaa 31545095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 89 - 165
Target Start/End: Complemental strand, 26098589 - 26098513
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatg 165  Q
    |||||||||||||||||||||| |||| |||||||||||||| ||| ||||| ||||||||| |||||| |||||||    
T  26098589 atacttttactataaatatagaccttgaatcagagtaaacctggagatagagggggctgaaataagggtttagaatg 26098513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 36208524 - 36208596
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctg-aaacaagggtatagaa 163  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||| |||||||||| |||||    
T  36208524 cttttactataaatatagaccttgtatcagagtaaaccttgagatagagggggctgaaaacaagggtttagaa 36208596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 17072827 - 17072898
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||||||||||  ||||||||| |||||||||||| ||||| |||||||||||||||| |||||    
T  17072827 cttttactataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaa 17072898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 25904047 - 25904118
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||||||||||  ||||||||| |||||||||||| ||||| |||||||||||||||| |||||    
T  25904047 cttttactataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaa 25904118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 90 - 165
Target Start/End: Original strand, 40221464 - 40221539
Alignment:
Q  90 tacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatg 165  Q
    |||||||||||||||||||||  |||  ||||||||||||||||| ||||| |||||||||||||||| |||||||    
T  40221464 tacttttactataaatatagacattgactcagagtaaaccttgagatagagggggctgaaacaagggtttagaatg 40221539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 89 - 165
Target Start/End: Original strand, 26097674 - 26097750
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatg 165  Q
    |||||||||||||||||||||| |||| |||||||||||| ||||| ||||| ||||||||| || ||| |||||||    
T  26097674 atacttttactataaatatagaccttgaatcagagtaaactttgagatagagggggctgaaataaaggtttagaatg 26097750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 134
Target Start/End: Complemental strand, 2144978 - 2144884
Alignment:
Q  43 aacataaacgtatttt-tgggtccagatttgtttcaaat-tttaagcgatacttttactataaatatagatcttgtatcaga-gtaaaccttgag 134  Q
    |||||||||||||||| |||| | ||||||||| ||| | ||| || ||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  2144978 aacataaacgtattttctgggccgagatttgttccaattatttgagggatacttttactataaatatagaccttgtatcagatgtaaaccttgag 2144884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 10529436 - 10529363
Alignment:
Q  90 tacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||| |||||||||||||| |||||||||||| |||| ||||| ||||| ||| |||||||||||| |||||    
T  10529436 tactttcactataaatatagaccttgtatcagagcaaactttgagatagagtgggttgaaacaagggtttagaa 10529363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 39854426 - 39854498
Alignment:
Q  90 tacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||| |||||||||||||| |||||||||||| |||| ||||| ||||| |||||||||||||||| |||||    
T  39854426 tactttcactataaatatagaccttgtatcagagcaaactttgagatagag-gggctgaaacaagggtttagaa 39854498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 163
Target Start/End: Complemental strand, 34531050 - 34530930
Alignment:
Q  43 aacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagag 142  Q
    ||||||||||||||||  || | ||||||||| ||  ||||    ||| |||||||| ||||||||||  ||| |||||||||||||||||| ||||| |    
T  34531050 aacataaacgtattttcaggcctagatttgttccagtttttttaggattcttttactgtaaatatagactttgaatcagagtaaaccttgagatagaggg 34530951  T
Q  143 ggctgaaacaagggtatagaa 163  Q
    |||||||||||| || |||||    
T  34530950 ggctgaaacaagtgtttagaa 34530930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 65 - 163
Target Start/End: Complemental strand, 31179733 - 31179635
Alignment:
Q  65 cagatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||||||  | |||||||||   ||||||||||||||||||||  |||||||| || |||| ||||| ||||| | |||||||||||||| |||||    
T  31179733 cagatttgttatagattttaagcaggacttttactataaatatagacattgtatcaaagcaaactttgagatagagggagctgaaacaagggtttagaa 31179635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 166
Target Start/End: Complemental strand, 18509652 - 18509579
Alignment:
Q  94 tttactataaatatagatcttgtatcagagtaaaccttgagctagaga-gggctgaaacaagggtatagaatga 166  Q
    ||||||||||||||||| ||||||||||| ||||| |||||  | ||| |||||||||||||||| ||||||||    
T  18509652 tttactataaatatagaccttgtatcagactaaactttgagagatagaggggctgaaacaagggtttagaatga 18509579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 20044954 - 20045019
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggt 157  Q
    ||||||||||||||||||   ||||||||||| ||||||||||  |||| ||||||||||||||||    
T  20044954 cttttactataaatataggctttgtatcagagcaaaccttgagacagagggggctgaaacaagggt 20045019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 37706117 - 37706044
Alignment:
Q  90 tacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||| |||||||||||||  ||||||||| |||||||||||| ||||| ||||||||| || ||| |||||    
T  37706117 tacttttgctataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaataaaggtttagaa 37706044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 95 - 155
Target Start/End: Complemental strand, 10474655 - 10474595
Alignment:
Q  95 ttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagg 155  Q
    ||||||||||||||||  ||||||||| |||||||||||  ||||| ||||||||||||||    
T  10474655 ttactataaatatagacattgtatcagtgtaaaccttgaaatagagggggctgaaacaagg 10474595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 34477434 - 34477378
Alignment:
Q  65 cagatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcag 121  Q
    |||||||||| || ||||||||||| |||||||||||||| ||||| ||||||||||    
T  34477434 cagatttgttacagattttaagcgagacttttactataaaaatagaccttgtatcag 34477378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 166
Target Start/End: Complemental strand, 18511547 - 18511473
Alignment:
Q  94 tttactataaatatagatcttgtatcagagtaaacctt--gagctagagagggctgaaacaagggtatagaatga 166  Q
    |||| |||||||||||| ||||||||||| ||||| ||  ||| ||||| |||||||||||||||| ||||||||    
T  18511547 tttaatataaatatagaccttgtatcagactaaactttgagagatagagggggctgaaacaagggtttagaatga 18511473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 20042994 - 20043065
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||||||||||||||   |||||||| || |||||||||| ||||| ||||||||||||| || |||||    
T  20042994 cttttactataaatataggctttgtatcatagcaaaccttgagatagagggggctgaaacaagtgtttagaa 20043065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 24126800 - 24126871
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||||||||||  || |||||| |||||||||||| ||||  ||||||||||||| || |||||    
T  24126800 cttttactataaatatagacattatatcagtgtaaaccttgagatagatggggctgaaacaagagtttagaa 24126871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 122
Target Start/End: Original strand, 29748260 - 29748315
Alignment:
Q  67 gatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcaga 122  Q
    |||||||| |||||||| || ||| ||||||||||||||||||| |||||||||||    
T  29748260 gatttgttccaaattttgagggatgcttttactataaatatagaccttgtatcaga 29748315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 163
Target Start/End: Complemental strand, 31472948 - 31472877
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||||||| ||  |||||| || |||||||||||| ||||| ||||| |||||||||| |||||    
T  31472948 cttttactataaatatggacattgtattagtgtaaaccttgagatagagggggctaaaacaagggtttagaa 31472877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 165
Target Start/End: Original strand, 10586780 - 10586859
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaaccttgagctagaga---gggctgaaacaagggtatagaatg 165  Q
    |||||||||||||||||||||| ||||||||||  ||||| |||||  ||| |   |||||||||||||||| |||||||    
T  10586780 atacttttactataaatatagaccttgtatcaggctaaactttgagagagatagaggggctgaaacaagggtttagaatg 10586859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 21288715 - 21288780
Alignment:
Q  99 tataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaat 164  Q
    |||||||||||| |||| || ||||||||||||||| ||||| ||| ||||| |||||| ||||||    
T  21288715 tataaatatagaccttgaattagagtaaaccttgagatagagggggttgaaataagggtttagaat 21288780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 140
Target Start/End: Original strand, 2723911 - 2723959
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagag 140  Q
    |||||||||||||||||||  ||||||||| |||||||||||| |||||    
T  2723911 cttttactataaatatagacattgtatcagtgtaaaccttgagatagag 2723959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 4409999 - 4410076
Alignment:
Q  90 tacttttactataaatatagatcttgtatcagagtaaaccttgagc----tagagagggctgaaacaagggtatagaa 163  Q
    |||||| |||||||||||||| |||||||||||| |||| |||||     ||||| |||||||||||||||| |||||    
T  4409999 tactttcactataaatatagaccttgtatcagagcaaactttgagagagatagagggggctgaaacaagggtttagaa 4410076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 34479795 - 34479739
Alignment:
Q  65 cagatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcag 121  Q
    |||||||||| || ||||||||||| || ||||||||||| ||||| ||||||||||    
T  34479795 cagatttgttacagattttaagcgagacctttactataaaaatagaccttgtatcag 34479739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 150
Target Start/End: Original strand, 42770672 - 42770775
Alignment:
Q  48 aaacgtatttttg-ggtccagatttgtttcaaattt-taagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggc 145  Q
    ||||||||||||  || ||||||||||| ||| ||| | || ||||||||||||||||||||| |  ||||||| |||||||||||||| ||||| || |    
T  42770672 aaacgtatttttatgggccagatttgttccaattttatgagggatacttttactataaatataaactttgtatc-gagtaaaccttgagatagaggggac 42770770  T
Q  146 tgaaa 150  Q
    |||||    
T  42770771 tgaaa 42770775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 695833 - 695904
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||| ||||||||  |||||| || |||||||||||| || || ||| |||||||||||| |||||    
T  695833 cttttactatgaatatagacattgtatgagtgtaaaccttgagataaagggggatgaaacaagggtttagaa 695904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 134
Target Start/End: Complemental strand, 1189949 - 1189906
Alignment:
Q  92 cttttactataaatatagatcttgtatcaga-gtaaaccttgag 134  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||    
T  1189949 cttttactataaatatagaccttgtatcagatgtaaaccttgag 1189906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 163
Target Start/End: Complemental strand, 39398327 - 39398257
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||||||||||||| |  ||||| | | |||||||||||| ||||| |||||||||||||||| |||||    
T  39398327 cttttactataaatataaacattgtaccggtgtaaaccttgagatagag-gggctgaaacaagggtttagaa 39398257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 105
Target Start/End: Original strand, 25837914 - 25837976
Alignment:
Q  43 aacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaat 105  Q
    ||||||||||||||||||||||  |||||||| ||| |||| || ||| |||||| |||||||    
T  25837914 aacataaacgtatttttgggtctggatttgttccaattttttagggatgcttttaatataaat 25837976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 134
Target Start/End: Complemental strand, 3373379 - 3373334
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaaccttgag 134  Q
    |||||||||||||||||||||| ||||||||| || |||| |||||    
T  3373379 atacttttactataaatatagaccttgtatcaaagcaaactttgag 3373334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 134
Target Start/End: Original strand, 15552176 - 15552221
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaaccttgag 134  Q
    |||||||||||||||||||||| ||||||||||  ||||| |||||    
T  15552176 atacttttactataaatatagaccttgtatcaggctaaactttgag 15552221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 17818826 - 17818754
Alignment:
Q  90 tacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||  ||||||||||||  ||||||||| ||||||||||||  |||| ||||||||||||| || |||||    
T  17818826 tacttttgttataaatatagacattgtatcagtgtaaaccttgagaaagag-gggctgaaacaagagtttagaa 17818754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 93 - 163
Target Start/End: Original strand, 18466625 - 18466699
Alignment:
Q  93 ttttactataaatatagatcttgtatcagagtaaaccttgagc----tagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||||||||| ||||||||||  ||||| |||||     ||||| |||||||||||||||| |||||    
T  18466625 ttttactataaatatagaccttgtatcaggctaaactttgagagagatagagggggctgaaacaagggtttagaa 18466699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 65 - 134
Target Start/End: Original strand, 23665055 - 23665124
Alignment:
Q  65 cagatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgag 134  Q
    ||||||||||  | |||||||||   |||||||||||||||||||| ||||||||| || |||| |||||    
T  23665055 cagatttgttatagattttaagcaggacttttactataaatatagaccttgtatcaaagcaaactttgag 23665124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 65 - 134
Target Start/End: Complemental strand, 23793532 - 23793463
Alignment:
Q  65 cagatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgag 134  Q
    ||||||||||  | |||||||||   |||||||||||||||||||| ||||||||| || |||| |||||    
T  23793532 cagatttgttatagattttaagcaggacttttactataaatatagaccttgtatcaaagcaaactttgag 23793463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 134
Target Start/End: Original strand, 27910386 - 27910431
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaaccttgag 134  Q
    |||||||||||||||||||||| ||||||||||  ||||| |||||    
T  27910386 atacttttactataaatatagaccttgtatcaggttaaactttgag 27910431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 134
Target Start/End: Original strand, 27912471 - 27912516
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaaccttgag 134  Q
    |||||||||||||||||||||| ||||||||||  ||||| |||||    
T  27912471 atacttttactataaatatagaccttgtatcaggctaaactttgag 27912516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 121
Target Start/End: Original strand, 25803957 - 25803989
Alignment:
Q  89 atacttttactataaatatagatcttgtatcag 121  Q
    |||||||||||||||||||||| ||||||||||    
T  25803957 atacttttactataaatatagaccttgtatcag 25803989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 107; Significance: 1e-53; HSPs: 90)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 3859361 - 3859523
Alignment:
Q  1 gatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttacta 100  Q
    ||||||||||||  |||||||||||||||| |||| |||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  3859361 gatggggtcacatcgtggcacgatggtgcgctggcggcgaataatataaacgtatttttgggtgcagatttgtttcaaattttaagcgaaacttttacta 3859460  T
Q  101 taaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||| |||||||||||| |||| | ||| ||||| |||||||||||||||| |||||    
T  3859461 taaatatagaccttgtatcagagcaaacttggagatagagggggctgaaacaagggtttagaa 3859523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 10956451 - 10956287
Alignment:
Q  1 gatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttacta 100  Q
    ||||||||| ||  |||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||||| |||||||||||| ||  ||||||||    
T  10956451 gatggggtcgcatcgtggcacgatggtgcgctggcagcgaataacataaacgtatttttaggtgcagatttgttccaaattttaagcaatttttttacta 10956352  T
Q  101 taaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatg 165  Q
    |||||||||| ||||||||||||||||| |  || ||||| |||||||||||||||| |||||||    
T  10956351 taaatatagaccttgtatcagagtaaacatgaagatagagggggctgaaacaagggtttagaatg 10956287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 15 - 163
Target Start/End: Original strand, 11162997 - 11163145
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatctt 114  Q
    |||||||||||||||| |||| |||||||||| |||||||||||||||| |||||||||| |||||||||||||| |||||||| ||||||||||| |||    
T  11162997 gtggcacgatggtgcgctggcggcgaataacagaaacgtatttttgggtgcagatttgttccaaattttaagcgaaacttttacgataaatatagacctt 11163096  T
Q  115 gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||||| |||| ||||| ||||| |||||||||||||||| |||||    
T  11163097 gtatcagagcaaactttgagatagagggggctgaaacaagggtttagaa 11163145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 15 - 163
Target Start/End: Complemental strand, 32264453 - 32264301
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatctt 114  Q
    |||||||||||||||| ||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||    
T  32264453 gtggcacgatggtgcgctggcagcgaataacagaaacatatttttgggtgcagatttgtttcaaattttaagcgatacttttactataaatatagacctt 32264354  T
Q  115 gtatcagagta----aaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||    ||| ||||| ||||| ||||| |||||||||| |||||    
T  32264353 gtatcagagtaaattaactttgagatagagggggctcaaacaagggtttagaa 32264301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 22114729 - 22114567
Alignment:
Q  1 gatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttacta 100  Q
    ||||||||| ||  |||||||||||||||| |||| |||||||||| |||||||||||||||| |||||||||| |||||||||||||| ||||||||||    
T  22114729 gatggggtcgcatcgtggcacgatggtgcgatggcggcgaataacagaaacgtatttttgggtgcagatttgttccaaattttaagcgaaacttttacta 22114630  T
Q  101 taaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||| |||||||||||| |||| | ||| ||||  |||||||||||||||| |||||    
T  22114629 taaatatagaccttgtatcagagcaaacttggagatagaaggggctgaaacaagggtttagaa 22114567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 15 - 163
Target Start/End: Complemental strand, 5523025 - 5522877
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatctt 114  Q
    |||||||||||||||| |||||||||| |||| |||| |||||||| || ||||||||||||||||||||||||| |||||||||||||||||||| |||    
T  5523025 gtggcacgatggtgcgctggcagcgaaaaacagaaacatatttttgagtgcagatttgtttcaaattttaagcgaaacttttactataaatatagacctt 5522926  T
Q  115 gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||||| |||| | ||| ||||| |||||||||||||||| |||||    
T  5522925 gtatcagagcaaacttggagatagagggggctgaaacaagggtttagaa 5522877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 1321274 - 1321436
Alignment:
Q  1 gatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttacta 100  Q
    ||||||||| ||  |||||||||||||| | |||||||||| |||| |||| |||||||| || |||||||||| |||||||||||||||||||||||||    
T  1321274 gatggggtcgcatcgtggcacgatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagcgatacttttacta 1321373  T
Q  101 taaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||||||  ||||||||||| |||| ||||| ||||| |||||||||||||||| |||||    
T  1321374 taaatatagactttgtatcagagcaaactttgagatagagggggctgaaacaagggtttagaa 1321436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 10958747 - 10958583
Alignment:
Q  1 gatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttacta 100  Q
    ||||||||| ||  |||||||||||||||| ||||||| ||||||| |||||||||||| ||| |||||||||| |||||||||||| ||  ||||||||    
T  10958747 gatggggtcgcatcgtggcacgatggtgcgctggcagccaataacagaaacgtatttttaggtgcagatttgttccaaattttaagcaatttttttacta 10958648  T
Q  101 taaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatg 165  Q
    |||||||||| ||||||||||||||||| |  || ||||| |||||||||||||||| |||||||    
T  10958647 taaatatagaccttgtatcagagtaaacataaagatagagggggctgaaacaagggtttagaatg 10958583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 15 - 163
Target Start/End: Original strand, 11170251 - 11170399
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatctt 114  Q
    ||||| |||| ||||| |||| |||||||||| |||| ||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||| |||    
T  11170251 gtggctcgattgtgcgctggcggcgaataacagaaacatatttttgggtgcagatttgttccaaattttaagcgaaacttttactataaatatagacctt 11170350  T
Q  115 gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||||| |||| ||||| ||||| |||||||||||||||| |||||    
T  11170351 gtatcagagcaaactttgagatagagggggctgaaacaagggtttagaa 11170399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 15 - 163
Target Start/End: Original strand, 45882786 - 45882934
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatctt 114  Q
    |||||||||||||||| || || ||||||||| |||| ||||||||||| ||||||||||  |||||||||||||||||||||||||||||||||| |||    
T  45882786 gtggcacgatggtgcgctgacaacgaataacagaaacctatttttgggtgcagatttgttgaaaattttaagcgatacttttactataaatatagacctt 45882885  T
Q  115 gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||| |||||||  |||| ||||| |||||||||||||||| |||||    
T  45882886 gtatcatagtaaactatgagatagagggggctgaaacaagggtttagaa 45882934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 15 - 155
Target Start/End: Complemental strand, 48362080 - 48361940
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatctt 114  Q
    |||||| ||||||||| |||||||||||| || |||||||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  48362080 gtggcatgatggtgcgctggcagcgaatagcagaaacgtatttttggatgcagatttgttccaaattttaagcgatacttttactataaatatagacctt 48361981  T
Q  115 gtatcagagtaaaccttgagctagagagggctgaaacaagg 155  Q
    |||||| ||||||| ||||| || || ||||||||||||||    
T  48361980 gtatcatagtaaactttgagatacagggggctgaaacaagg 48361940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 19 - 163
Target Start/End: Original strand, 18162515 - 18162658
Alignment:
Q  19 cacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatcttgtat 118  Q
    |||||||||||| ||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  18162515 cacgatggtgcgctggcagcgaataacagaaacgtatttttgggtgcagatttgttccaaattttaagcgatacttttactataaatatagaccttgtat 18162614  T
Q  119 ca-gagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    || |||||||| | |||  | |||||| |||||||||||| |||||    
T  18162615 catgagtaaacttggag--atagagggatgaaacaagggtttagaa 18162658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 24177112 - 24177261
Alignment:
Q  1 gatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttacta 100  Q
    |||||| || ||| ||||||||||||||||||||  ||||| |||||||||||||||||  || |||||||||| ||||||||||| |||||||||| ||    
T  24177112 gatgggatcgcaatgtggcacgatggtgcgttggaggcgaaaaacataaacgtatttttaagtgcagatttgttccaaattttaagggatacttttatta 24177211  T
Q  101 taaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaa 150  Q
    |||||||||| ||||||||| ||||||| ||||||||||| |||||||||    
T  24177212 taaatatagaccttgtatcatagtaaacattgagctagagggggctgaaa 24177261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 15 - 163
Target Start/End: Original strand, 24979554 - 24979702
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatctt 114  Q
    ||||||||||||| || ||| |||||||||||||||| ||||||| ||| |||||||||| |||||||||||  ||||||| |||||||||||| | |||    
T  24979554 gtggcacgatggtacgctggtagcgaataacataaacatattttttggtgcagatttgttccaaattttaagtaatactttcactataaatatatacctt 24979653  T
Q  115 gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||||| ||||| ||||| |||||||||||||||| |||||    
T  24979654 gtatcagagtaaactttgagatagagggggctgaaacaagggtttagaa 24979702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 15 - 157
Target Start/End: Original strand, 32218942 - 32219084
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatctt 114  Q
    |||||||||||||||| ||||||||||||| | |||||||||||||||| |||||||||| |||||||||||  ||||||| | |||||||||||| |||    
T  32218942 gtggcacgatggtgcgctggcagcgaataagagaaacgtatttttgggtgcagatttgttccaaattttaagtaatactttcagtataaatatagacctt 32219041  T
Q  115 gtatcagagtaaaccttgagctagagagggctgaaacaagggt 157  Q
    ||||| || ||||| ||||| ||||| ||||||||||||||||    
T  32219042 gtatctgactaaactttgagatagagggggctgaaacaagggt 32219084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 18099594 - 18099430
Alignment:
Q  1 gatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttacta 100  Q
    ||||||||| ||  |||||||||||||||| |||| ||||| || | |||||||||||||||| |||||||||| |||||||||||||| ||||||||||    
T  18099594 gatggggtcgcatcgtggcacgatggtgcgctggcggcgaacaatagaaacgtatttttgggtgcagatttgttccaaattttaagcgagacttttacta 18099495  T
Q  101 taaatatagatcttgtatcagagtaaacct-tgagctagagagggctgaaacaagggtatagaatg 165  Q
    | |||||||| ||||||||||||||||| |  ||| ||||| |||||||||||||||| |||||||    
T  18099494 t-aatatagaccttgtatcagagtaaacttgagagatagagggggctgaaacaagggtttagaatg 18099430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 55 - 165
Target Start/End: Original strand, 15780747 - 15780857
Alignment:
Q  55 tttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaag 154  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||||| |||||||||||||    
T  15780747 tttttgggtgcagatttgttccaaattttaagcgatacttttactataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaag 15780846  T
Q  155 ggtatagaatg 165  Q
    ||| |||||||    
T  15780847 ggtttagaatg 15780857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 32 - 165
Target Start/End: Complemental strand, 18097294 - 18097160
Alignment:
Q  32 tggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaacct- 130  Q
    |||| |||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||||||| |     
T  18097294 tggcggcgaataacagaaacgtatttttgggtgcagatttgtttcaaattttaagcgagacttttactataaatatagaccttgtatcatagtaaacttg 18097195  T
Q  131 tgagctagagagggctgaaacaagggtatagaatg 165  Q
     ||| ||||| ||||| |||||||||| |||||||    
T  18097194 agagatagagggggctcaaacaagggtttagaatg 18097160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 15 - 163
Target Start/End: Original strand, 5191500 - 5191648
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatctt 114  Q
    |||||||||||||||| |||||||||| |||| |||| |||||||| || |||||||||| ||||||||||| || |||||||||||||||||||| |||    
T  5191500 gtggcacgatggtgcgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagggaaacttttactataaatatagacctt 5191599  T
Q  115 gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||  || |||| | ||| ||||| |||||||||||||||| |||||    
T  5191600 gtatctaagcaaacttggagatagagggggctgaaacaagggtttagaa 5191648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 15 - 163
Target Start/End: Original strand, 26720395 - 26720543
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatctt 114  Q
    |||||||||||||| | |||||||||| |||| |||| |||||||  || |||||||||| |||||||||||| |||||||||||||||||||||| |||    
T  26720395 gtggcacgatggtgtgctggcagcgaaaaacagaaacatattttttagtgcagatttgttccaaattttaagcaatacttttactataaatatagacctt 26720494  T
Q  115 gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||||| |||| | ||| ||||| ||||||||| |||||| |||||    
T  26720495 gtatcagagcaaacttggagatagagggggctgaaataagggtttagaa 26720543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 15 - 163
Target Start/End: Original strand, 35777269 - 35777416
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatctt 114  Q
    |||||||||||||||| ||||||| || ||||||||| ||||||||||| |||||||||| || ||||||||| | ||||||||||||||||||||  ||    
T  35777269 gtggcacgatggtgcgctggcagcaaa-aacataaacatatttttgggtgcagatttgttacagattttaagcaagacttttactataaatatagacatt 35777367  T
Q  115 gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||| || |||| ||||| ||||| |||||||||||||||| |||||    
T  35777368 gtatcaaagcaaactttgagatagagggggctgaaacaagggtttagaa 35777416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 10084803 - 10084684
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatctt 114  Q
    |||||||||||||||| |||||||||| |||| |||| |||||||| || |||||||||| ||||||||||||||| ||||||||||||||||||| |||    
T  10084803 gtggcacgatggtgcgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagcgatgcttttactataaatatagacctt 10084704  T
Q  115 gtatcagagtaaaccttgag 134  Q
    ||||| ||| |||| |||||    
T  10084703 gtatcggagcaaactttgag 10084684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 10191723 - 10191604
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatctt 114  Q
    |||||||||||||||| |||||||||| |||| |||| |||||||| || || ||||||| ||||||||||||||||||||||||||||||||||| |||    
T  10191723 gtggcacgatggtgcgctggcagcgaaaaacagaaacatatttttgagtgcaaatttgttccaaattttaagcgatacttttactataaatatagacctt 10191624  T
Q  115 gtatcagagtaaaccttgag 134  Q
    ||||| ||| |||| |||||    
T  10191623 gtatcggagcaaactttgag 10191604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 50 - 163
Target Start/End: Complemental strand, 12268341 - 12268228
Alignment:
Q  50 acgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaa 149  Q
    ||||||||||  || || ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| | ||||||    
T  12268341 acgtatttttcagtgcaaatttgttccaaattttaagcgatacttttactataaatatagaacttgtatcagagtaaactttgagatagagggagctgaa 12268242  T
Q  150 acaagggtatagaa 163  Q
    ||||| || |||||    
T  12268241 acaagagtttagaa 12268228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 41 - 155
Target Start/End: Original strand, 23633332 - 23633447
Alignment:
Q  41 ataacataaacgtatttttgggtccagatttgtttcaaattt-taagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctaga 139  Q
    |||||| ||||||||||| | | | ||||||||| ||| ||| | || |||||||||||||||||||||||  |||||||||||||||||||||| ||||    
T  23633332 ataacagaaacgtattttcgagcctagatttgttccaattttatgagggatacttttactataaatatagactttgtatcagagtaaaccttgagataga 23633431  T
Q  140 gagggctgaaacaagg 155  Q
    ||||||| ||||||||    
T  23633432 gagggctaaaacaagg 23633447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 89 - 155
Target Start/End: Original strand, 1313331 - 1313397
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagg 155  Q
    |||||||||||||||||||||| |||| |||||||||||||||||| ||||| ||||||||||||||    
T  1313331 atacttttactataaatatagaccttgaatcagagtaaaccttgagatagagggggctgaaacaagg 1313397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 163
Target Start/End: Complemental strand, 6066206 - 6066058
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatctt 114  Q
    |||||||||||||||| |||| |  || || | ||| |||||||||||  |||||||||| || |||||||||   |||||||||||||||||||| |||    
T  6066206 gtggcacgatggtgcgctggcggataaaaata-aaatgtatttttgggagcagatttgttacagattttaagcagaacttttactataaatatagacctt 6066108  T
Q  115 gtatcagagtaaaccttgagctaga-gagggctgaaacaagggtatagaa 163  Q
    |||||| || |||| ||||| |||| | |||||||||||||||| |||||    
T  6066107 gtatcaaagcaaactttgagatagaggggggctgaaacaagggtttagaa 6066058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 98 - 163
Target Start/End: Original strand, 6561740 - 6561805
Alignment:
Q  98 ctataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||| |||||    
T  6561740 ctataaatatagaccttgtatcagagtaaaccttgagatagagggggctgaaacaagggtttagaa 6561805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 88 - 157
Target Start/End: Original strand, 53597161 - 53597229
Alignment:
Q  88 gatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggt 157  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||| ||||||||||||    
T  53597161 gatacttttactataaatatagaccttgtatcagagtaaaccttgagatagag-gggatgaaacaagggt 53597229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 89 - 166
Target Start/End: Complemental strand, 53915832 - 53915755
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatga 166  Q
    |||||||||||||||||||||| |||| ||||||||||||||| || ||||| |||||||||||||||| ||| ||||    
T  53915832 atacttttactataaatatagaccttgaatcagagtaaaccttaagatagagggggctgaaacaagggtttaggatga 53915755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 92 - 163
Target Start/End: Complemental strand, 1627016 - 1626945
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||||||||||  ||||||||| |||||||||||| ||||| |||||||||||||||| |||||    
T  1627016 cttttactataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaa 1626945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 3314608 - 3314679
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||||||||||| ||||||||| |||||||||||| ||||| ||||||||| |||||| |||||    
T  3314608 cttttactataaatatagatattgtatcagtgtaaaccttgagatagagggggctgaaataagggtttagaa 3314679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 92 - 163
Target Start/End: Complemental strand, 5927097 - 5927026
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||||||||||  ||||||| | |||||||||||| |||||||||||||||||||||| |||||    
T  5927097 cttttactataaatatagacattgtatcggtgtaaaccttgagatagagagggctgaaacaagggtttagaa 5927026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 88 - 163
Target Start/End: Complemental strand, 28761765 - 28761690
Alignment:
Q  88 gatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||||||||||||||  ||| |||||||||||||||||| ||||| ||| |||||||||||| |||||    
T  28761765 gatacttttactataaatatagactttgcatcagagtaaaccttgagatagagggggttgaaacaagggtttagaa 28761690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 92 - 165
Target Start/End: Complemental strand, 890104 - 890031
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatg 165  Q
    |||||||||||||||||||| ||||||||| |||||||||||| |||||   |||||||||||||| |||||||    
T  890104 cttttactataaatatagatattgtatcagtgtaaaccttgagatagaggaagctgaaacaagggtttagaatg 890031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 4308616 - 4308543
Alignment:
Q  90 tacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||| |||||||||||||| |||||||||||| |||| ||||| ||||| |||||||||||||||| |||||    
T  4308616 tactttcactataaatatagaccttgtatcagagcaaactttgagatagagggggctgaaacaagggtttagaa 4308543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 65 - 163
Target Start/End: Complemental strand, 6063808 - 6063708
Alignment:
Q  65 cagatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaacctt--gagctagagagggctgaaacaagggtataga 162  Q
    |||||||||| || ||||||||| | |||||||||||||||||||| ||||||||| || |||| ||  ||| ||||| |||||||||||||||| ||||    
T  6063808 cagatttgttacagattttaagcaagacttttactataaatatagaccttgtatcaaagcaaactttgagagatagagggggctgaaacaagggtttaga 6063709  T
Q  163 a 163  Q
    |    
T  6063708 a 6063708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 166
Target Start/End: Complemental strand, 53918000 - 53917923
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatga 166  Q
    |||||||||||||||||||||| |||| |||||| ||||||||||| | ||| |||||||||||| ||| ||||||||    
T  53918000 atacttttactataaatatagaccttgaatcagattaaaccttgagatggagggggctgaaacaatggtttagaatga 53917923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 93 - 165
Target Start/End: Complemental strand, 27635959 - 27635887
Alignment:
Q  93 ttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatg 165  Q
    |||||||| ||||||||| |||| || ||||||||||||||| ||||| |||||||||||||||| |||||||    
T  27635959 ttttactacaaatatagaccttgaattagagtaaaccttgagatagagggggctgaaacaagggtttagaatg 27635887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 87
Target Start/End: Original strand, 38889864 - 38889936
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagc 87  Q
    |||||||||||||||| |||| |||||||||| |||| ||||||||||| |||||||||| || |||||||||    
T  38889864 gtggcacgatggtgcgctggcggcgaataacagaaacatatttttgggtgcagatttgttacagattttaagc 38889936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 41 - 163
Target Start/End: Original strand, 23636899 - 23637022
Alignment:
Q  41 ataacataaacgtatttttgggtccagatttgtttcaaattt-taagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctaga 139  Q
    |||||| |||| ||||||| || | ||||||||||||| ||| | || |||| ||||| |||||||||| |  |||||||||||||||||||||| ||||    
T  23636899 ataacagaaacatatttttcggcctagatttgtttcaattttatgagggataattttaatataaatatatactttgtatcagagtaaaccttgagataga 23636998  T
Q  140 gagggctgaaacaagggtatagaa 163  Q
    |  |||| |||||||||| |||||    
T  23636999 ggaggctaaaacaagggtttagaa 23637022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 163
Target Start/End: Complemental strand, 28137628 - 28137557
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||||||||    |||||||||||||||||||||| ||||| |||||||||||||||| |||||    
T  28137628 cttttactataaatatatgcgttgtatcagagtaaaccttgagatagagggggctgaaacaagggtttagaa 28137557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 163
Target Start/End: Complemental strand, 47701928 - 47701857
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||||||||||  ||||||||| |||||||||||| || || |||||||||||||||| |||||    
T  47701928 cttttactataaatatagacattgtatcagtgtaaaccttgagataaagggggctgaaacaagggtttagaa 47701857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 89 - 163
Target Start/End: Original strand, 51943292 - 51943366
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||||||||||||| |||| |||||||||||||| ||| ||||| | |||||||||| ||| |||||    
T  51943292 atacttttactataaatatagaccttgaatcagagtaaacctggagatagagggtgctgaaacaaaggtttagaa 51943366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 165
Target Start/End: Complemental strand, 880785 - 880712
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatg 165  Q
    |||||||||||||||||||  ||||||||| |||||||||||| ||||| || |||||||||| || |||||||    
T  880785 cttttactataaatatagacattgtatcagtgtaaaccttgagatagaggggtctgaaacaagagtttagaatg 880712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 65 - 134
Target Start/End: Complemental strand, 6719471 - 6719402
Alignment:
Q  65 cagatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgag 134  Q
    |||||||||| || ||||||||| | |||||||||||||||||||| |||||||||||| |||| |||||    
T  6719471 cagatttgttacagattttaagcaagacttttactataaatatagaccttgtatcagagcaaactttgag 6719402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 65 - 118
Target Start/End: Original strand, 38889936 - 38889989
Alignment:
Q  65 cagatttgtttcaaattttaagcgatacttttactataaatatagatcttgtat 118  Q
    |||||||||| |||||||||||||| |||||||||||||||||||| |||||||    
T  38889936 cagatttgttccaaattttaagcgaaacttttactataaatatagaccttgtat 38889989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 51727341 - 51727268
Alignment:
Q  90 tacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||| |||||||||||||| |||||||||||| |||| ||||| || || |||||||||||||||| |||||    
T  51727341 tactttcactataaatatagaccttgtatcagagcaaactttgagataaagggggctgaaacaagggtttagaa 51727268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 165
Target Start/End: Complemental strand, 53468788 - 53468715
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatg 165  Q
    |||||||||||||||||||  ||||||||| ||||||||| || || || |||||||||||||||| |||||||    
T  53468788 cttttactataaatatagacattgtatcagtgtaaacctttagataaagggggctgaaacaagggtttagaatg 53468715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 87
Target Start/End: Complemental strand, 6719543 - 6719471
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagc 87  Q
    |||||||||||||||| |||| |||||||||| |||| ||||||||||| |||||||| | || |||||||||    
T  6719543 gtggcacgatggtgcgctggcggcgaataacagaaacatatttttgggtgcagatttgatacagattttaagc 6719471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 163
Target Start/End: Complemental strand, 28100374 - 28100303
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||||||||    |||||||||||||| ||||||| ||||| |||||||||||||||| |||||    
T  28100374 cttttactataaatataagcgttgtatcagagtaacccttgagatagagggggctgaaacaagggtttagaa 28100303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 163
Target Start/End: Complemental strand, 43423796 - 43423725
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||||||||||  ||||||||  ||||||||||||  |||| |||||||||||||||| |||||    
T  43423796 cttttactataaatatagacattgtatcactgtaaaccttgagaaagagggggctgaaacaagggtttagaa 43423725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 93 - 163
Target Start/End: Original strand, 3306724 - 3306794
Alignment:
Q  93 ttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||||||||||||||  ||||||||| |||||||| ||| || || |||||||||||||||| |||||    
T  3306724 ttttactataaatatagacattgtatcagtgtaaacctagagatatagggggctgaaacaagggtttagaa 3306794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 5886182 - 5886240
Alignment:
Q  65 cagatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcagag 123  Q
    |||||||||| || ||||||||||| |||||||||||||||||||| ||| ||||||||    
T  5886182 cagatttgttacagattttaagcgaaacttttactataaatatagaccttttatcagag 5886240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 5899657 - 5899715
Alignment:
Q  65 cagatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcagag 123  Q
    |||||||||| || ||||||||||| |||||||||||||||||||| ||| ||||||||    
T  5899657 cagatttgttacagattttaagcgagacttttactataaatatagaccttttatcagag 5899715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 93 - 155
Target Start/End: Original strand, 6231374 - 6231436
Alignment:
Q  93 ttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagg 155  Q
    ||||||||||||||||||  ||||||||| ||||| |||||| ||||| ||||||||||||||    
T  6231374 ttttactataaatatagacattgtatcagtgtaaatcttgagatagagcgggctgaaacaagg 6231436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 156
Target Start/End: Original strand, 6484307 - 6484373
Alignment:
Q  90 tacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaaggg 156  Q
    ||||||| ||||||||||||   ||||||||| |||||||||||| ||||| |||||||||||||||    
T  6484307 tacttttgctataaatataggcattgtatcagtgtaaaccttgagatagagggggctgaaacaaggg 6484373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 92 - 150
Target Start/End: Original strand, 28180948 - 28181006
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaa 150  Q
    |||||||||||||||||||  ||||||||| |||||||||||| ||||| |||||||||    
T  28180948 cttttactataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaa 28181006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 93 - 163
Target Start/End: Complemental strand, 43421747 - 43421677
Alignment:
Q  93 ttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||||||||||||||  ||||||||| |||||||||||| ||||  ||| |||||||||||| |||||    
T  43421747 ttttactataaatatagacattgtatcagtgtaaaccttgagatagaaggggttgaaacaagggtttagaa 43421677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 65 - 163
Target Start/End: Original strand, 50493896 - 50493994
Alignment:
Q  65 cagatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||| || |||||||||   ||||| |||||||||||||| ||||||||| || ||||   ||| ||||| |||||||||||||||| |||||    
T  50493896 cagatttgttacagattttaagcaggactttcactataaatatagaccttgtatcaaagcaaactgagagatagagggggctgaaacaagggtttagaa 50493994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 93 - 163
Target Start/End: Complemental strand, 51675087 - 51675017
Alignment:
Q  93 ttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||||||||||||||  ||||||||  |||||| ||||| ||||| |||||||||||||||| |||||    
T  51675087 ttttactataaatatagacgttgtatcaatgtaaacgttgagatagagggggctgaaacaagggtttagaa 51675017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 163
Target Start/End: Original strand, 455824 - 455902
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaaccttgagc----tagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||||||||||||| ||||||||||  |||||||||||     ||||| |||||||||||||||| |||||    
T  455824 atacttttactataaatatagaccttgtatcaggctaaaccttgagagagatagagggggctgaaacaagggtttagaa 455902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 163
Target Start/End: Original strand, 458201 - 458279
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaaccttgagc----tagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||||||||||||| ||||||||||  |||||||||||     ||||| |||||||||||||||| |||||    
T  458201 atacttttactataaatatagaccttgtatcaggctaaaccttgagagagatagagggggctgaaacaagggtttagaa 458279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 88 - 157
Target Start/End: Complemental strand, 13420509 - 13420440
Alignment:
Q  88 gatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggt 157  Q
    |||||||||||||||||||||| | |||||||| || |||||||||| || ||  |||||||||||||||    
T  13420509 gatacttttactataaatataggttttgtatcaaagcaaaccttgagatataggaggctgaaacaagggt 13420440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 35918284 - 35918211
Alignment:
Q  90 tacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||| |||||||||||||| ||||||||| || |||  ||||| ||||| |||||||||||||||| |||||    
T  35918284 tactttcactataaatatagaccttgtatcatagcaaattttgagatagagggggctgaaacaagggtttagaa 35918211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 43226008 - 43226081
Alignment:
Q  90 tacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||| ||||||||||||||  ||||||||||| |||| | ||| ||||| |||||||||||||||| |||||    
T  43226008 tactttcactataaatatagacattgtatcagagcaaacttggagatagagggggctgaaacaagggtttagaa 43226081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 121
Target Start/End: Original strand, 25388795 - 25388851
Alignment:
Q  65 cagatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcag 121  Q
    |||||||||| || ||||||||| | |||||||||||||||||||| ||||||||||    
T  25388795 cagatttgttacagattttaagcaagacttttactataaatatagaccttgtatcag 25388851  T

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Target: chr3; HSP #68
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 39715392 - 39715463
Alignment:
Q  90 tacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtataga 162  Q
    ||||||| |||||||||||||  ||||||||| |||||||||||| ||||| ||||||||| |||||| ||||    
T  39715392 tacttttgctataaatatagacattgtatcagtgtaaaccttgagatagag-gggctgaaataagggtttaga 39715463  T

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Target: chr3; HSP #69
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 120
Target Start/End: Original strand, 13893290 - 13893345
Alignment:
Q  65 cagatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatca 120  Q
    |||||||||| ||||||||||| | |||||||||||||||||||||  ||||||||    
T  13893290 cagatttgttccaaattttaagggttacttttactataaatatagacattgtatca 13893345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 163
Target Start/End: Complemental strand, 28102335 - 28102264
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||||||||    |||||| ||||||| ||||||| ||||| |||||||||||||||| |||||    
T  28102335 cttttactataaatataagcgttgtattagagtaacccttgagatagagggggctgaaacaagggtttagaa 28102264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 155
Target Start/End: Original strand, 36011751 - 36011814
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagg 155  Q
    |||||||||||||||||||  |||||| || |||||||||||| || || ||||||||||||||    
T  36011751 cttttactataaatatagacattgtattagtgtaaaccttgagataaagggggctgaaacaagg 36011814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 53591119 - 53591190
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||||||||||  |||||| || |||||||||||| |||||  |||||||||||| || |||||    
T  53591119 cttttactataaatatagacattgtataagtgtaaaccttgagatagaggaggctgaaacaagagtttagaa 53591190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 5899572 - 5899657
Alignment:
Q  1 gatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagc 87  Q
    ||||||||| ||  |||||||||||||||| ||||||  || || | |||||||||||||||| |||||||||| || |||||||||    
T  5899572 gatggggtcgcatcgtggcacgatggtgcgctggcagataaaaata-aaacgtatttttgggtacagatttgttacagattttaagc 5899657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 163
Target Start/End: Complemental strand, 4104235 - 4104157
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaaccttgagc----tagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||||||||||||| ||||||||||  ||||| |||||     ||||| |||||||||||||||| |||||    
T  4104235 atacttttactataaatatagaccttgtatcaggctaaactttgagagagatagagggggctgaaacaagggtttagaa 4104157  T

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Target: chr3; HSP #75
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 31151271 - 31151344
Alignment:
Q  92 cttttactataaatatagatcttgtatcaga-gtaaaccttgagctagagagggctg-aaacaagggtatagaa 163  Q
    |||||||||||||||||||  |||||||||| |||||||| ||| ||||| |||||| |||||||||| |||||    
T  31151271 cttttactataaatatagactttgtatcagatgtaaacctcgagatagagggggctgaaaacaagggtttagaa 31151344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 43228213 - 43228286
Alignment:
Q  90 tacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||| ||||||||||||||  ||||||||||| |||| | ||| ||||| ||||||||||||| || |||||    
T  43228213 tactttcactataaatatagacattgtatcagagcaaacttggagatagagggggctgaaacaagagtttagaa 43228286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 122
Target Start/End: Complemental strand, 46966995 - 46966938
Alignment:
Q  65 cagatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcaga 122  Q
    |||||||||| ||||||||||| | ||||||||||||||||||| |  ||||||||||    
T  46966995 cagatttgttccaaattttaagggttacttttactataaatataaacattgtatcaga 46966938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 146
Target Start/End: Complemental strand, 53896556 - 53896475
Alignment:
Q  65 cagatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggct 146  Q
    |||||||||| || |||||||||   ||||| |||||||||||||| ||||||||| || |||| ||||| ||||| |||||    
T  53896556 cagatttgttacagattttaagcaggactttcactataaatatagaccttgtatcaaagcaaactttgagatagagggggct 53896475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 122
Target Start/End: Original strand, 26762839 - 26762919
Alignment:
Q  43 aacataaacgtatttttgggtcc-agatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcaga 122  Q
    ||||||||||||||||| || |  ||||||||| ||| |||| || ||| ||||||||||||||||| | |||||||||||    
T  26762839 aacataaacgtattttttgggcttagatttgttccaattttttagggatgcttttactataaatataaaccttgtatcaga 26762919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 121
Target Start/End: Original strand, 38210265 - 38210321
Alignment:
Q  65 cagatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcag 121  Q
    |||||||||| || ||||||||| | |||||||||||||||||||  ||||||||||    
T  38210265 cagatttgttacagattttaagcaagacttttactataaatataggccttgtatcag 38210321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 142
Target Start/End: Original strand, 1673895 - 1673950
Alignment:
Q  88 gatacttttactataaatatagatcttgtatc-agagtaaaccttgagctagagag 142  Q
    ||||||||||||||||||||||| |||||||| | ||||||||||||  |||||||    
T  1673895 gatacttttactataaatatagaacttgtatcaaaagtaaaccttgatgtagagag 1673950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 134
Target Start/End: Complemental strand, 1618995 - 1618949
Alignment:
Q  88 gatacttttactataaatatagatcttgtatcagagtaaaccttgag 134  Q
    |||||||| |||||||||||||| |||||| || |||||||||||||    
T  1618995 gatactttgactataaatatagaccttgtaccatagtaaaccttgag 1618949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 562144 - 562060
Alignment:
Q  43 aacataaacgtatttttgggtccagatttgtttcaaattt-taagcgatacttttactataaatatagatcttgtatcagagtaaa 127  Q
    |||| ||||||||||| ||| ||||||||||| ||  ||| |||| |||| ||||||||||||||||||  |||||| ||||||||    
T  562144 aacagaaacgtattttcggg-ccagatttgttccatttttataagggataattttactataaatatagactttgtattagagtaaa 562060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 134
Target Start/End: Original strand, 746672 - 746717
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaaccttgag 134  Q
    |||||||||||||||||||||| ||||||||||  ||||| |||||    
T  746672 atacttttactataaatatagaccttgtatcaggctaaactttgag 746717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 153
Target Start/End: Complemental strand, 4560602 - 4560537
Alignment:
Q  88 gatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaa 153  Q
    |||||||| ||||||| ||||||   ||||||| ||||||| ||||| ||||| ||||||||||||    
T  4560602 gatactttcactataagtatagactatgtatcatagtaaacattgagatagagggggctgaaacaa 4560537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 129
Target Start/End: Original strand, 4663843 - 4663880
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaacc 129  Q
    |||||||||||||||||||  |||||||||||||||||    
T  4663843 cttttactataaatatagacattgtatcagagtaaacc 4663880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 134
Target Start/End: Complemental strand, 10621878 - 10621833
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaaccttgag 134  Q
    |||||||||||||||||||||| ||||||||||  ||||| |||||    
T  10621878 atacttttactataaatatagaccttgtatcaggctaaactttgag 10621833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 134
Target Start/End: Complemental strand, 11008011 - 11007966
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaaccttgag 134  Q
    |||||||||||||||||||| | |||||||||||  ||||||||||    
T  11008011 atacttttactataaatataaaccttgtatcagatgaaaccttgag 11007966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 134
Target Start/End: Original strand, 25533355 - 25533400
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaaccttgag 134  Q
    |||||||||||||||||||||| ||||||||||  ||||| |||||    
T  25533355 atacttttactataaatatagaccttgtatcaggctaaactttgag 25533400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 140
Target Start/End: Complemental strand, 54691906 - 54691858
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagag 140  Q
    ||||||||||||||||||   ||||||||||||||||||| || |||||    
T  54691906 cttttactataaatataggctttgtatcagagtaaaccttaagatagag 54691858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 104; Significance: 6e-52; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 20 - 163
Target Start/End: Complemental strand, 40032465 - 40032322
Alignment:
Q  20 acgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatc 119  Q
    ||||||||||| ||||||||||||||| |||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||    
T  40032465 acgatggtgcgctggcagcgaataacagaaacgtatttttgggtgcagatttgttccaagttttaagcgatacttttactataaatatagaccttgtatc 40032366  T
Q  120 agagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||||| ||||| ||||| |||||||||||||||| |||||    
T  40032365 agagtaaactttgagatagagggggctgaaacaagggtttagaa 40032322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 22407835 - 22407673
Alignment:
Q  1 gatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttacta 100  Q
    |||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  ||||||||||| ||||||||||||    
T  22407835 gatgggatcacaacgtggcacgatggtgcgttggcagcgaataacagaaacgtatttttgggtgcagatttgttcaaaattttaagcaatacttttacta 22407736  T
Q  101 taaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||| |||||||||||||||||  |||| || || | |||||||||||||| |||||    
T  22407735 taaatatagaccttgtatcagagtaaactgtgagatatagggtgctgaaacaagggtttagaa 22407673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 24162638 - 24162476
Alignment:
Q  1 gatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttacta 100  Q
    ||||||||| ||  |||||||||| ||||| |||| |||||||  | |||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  24162638 gatggggtcgcatcgtggcacgattgtgcgctggctgcgaatattagaaacgtatttttgggtgcagatttgtttcaaattttaagcgaaacttttacta 24162539  T
Q  101 taaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||| |||||||||||| |||| ||||| ||||| |||||||||||||||| |||||    
T  24162538 taaatatagaccttgtatcagagcaaactttgagatagagggggctgaaacaagggtttagaa 24162476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 21521121 - 21520957
Alignment:
Q  1 gatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttacta 100  Q
    |||||| || ||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||    
T  21521121 gatgggatcgcaacgtggcacgatggtgcgctggcagcgaataacataaacgtatttttgggtgcagatttgttccaaaatttaagcgatacttttacta 21521022  T
Q  101 taaatatagatcttgtatcagagtaaacctt--gagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||| | ||||||||||| ||||| ||  ||| ||||  |||||||||||||||| |||||    
T  21521021 taaatataaaccttgtatcagactaaactttgagagatagatggggctgaaacaagggtttagaa 21520957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 15 - 157
Target Start/End: Original strand, 27104642 - 27104784
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatctt 114  Q
    |||||||||||||||| |||||| ||| ||||||||| |||||||| || |||||||||| |||||||||||||| |||||||||||||||||||| |||    
T  27104642 gtggcacgatggtgcgctggcagggaaaaacataaacatatttttgagtgcagatttgttccaaattttaagcgaaacttttactataaatatagacctt 27104741  T
Q  115 gtatcagagtaaaccttgagctagagagggctgaaacaagggt 157  Q
    ||||||||| |||| ||||| ||||| ||||||||||||||||    
T  27104742 gtatcagagaaaactttgagatagagggggctgaaacaagggt 27104784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 15 - 163
Target Start/End: Complemental strand, 6264557 - 6264409
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatctt 114  Q
    ||||||||||||||| || || |||||||||| |||| ||||||||||| |||||||||| |||||||||||||||| |||||||||||||||||| |||    
T  6264557 gtggcacgatggtgcattagcggcgaataacagaaacatatttttgggtgcagatttgttccaaattttaagcgatatttttactataaatatagacctt 6264458  T
Q  115 gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||| ||||| ||||| ||||| |||||||||||| ||| |||||    
T  6264457 gtatcagactaaactttgagatagagggggctgaaacaaaggtttagaa 6264409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 13910470 - 13910308
Alignment:
Q  1 gatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttacta 100  Q
    ||||||||| ||  |||||||||||||||| |||||||||| |||| |||| |||||||| || |||||||||| ||||||||||| || ||||||||||    
T  13910470 gatggggtcgcattgtggcacgatggtgcgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagggaaacttttacta 13910371  T
Q  101 taaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||| |||||||||||| |||| | ||| ||||| |||||||||||||||| |||||    
T  13910370 taaatatagaccttgtatcagagcaaacttggagatagagggggctgaaacaagggtttagaa 13910308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 42064344 - 42064506
Alignment:
Q  1 gatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttacta 100  Q
    |||||| |||||  |||||||||||||||| |||||||||| |||| |||| |||||||  || |||||||||| |||||||||||||||||||||||||    
T  42064344 gatgggatcacatcgtggcacgatggtgcgctggcagcgaaaaacagaaacatattttttagtgcagatttgttccaaattttaagcgatacttttacta 42064443  T
Q  101 taaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||| |||||||||||| |||| | ||| ||||| | |||||||||||||| |||||    
T  42064444 taaatatagaccttgtatcagagcaaacttggagatagagggagctgaaacaagggtttagaa 42064506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 15 - 163
Target Start/End: Complemental strand, 22287748 - 22287600
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatctt 114  Q
    ||||||| |||||||| ||||||||||||||| ||| |||| ||||||| || ||||||| ||||||||||||||||||||||||||||||||||| |||    
T  22287748 gtggcaccatggtgcgctggcagcgaataacaaaaatgtatgtttgggtgcatatttgttccaaattttaagcgatacttttactataaatatagacctt 22287649  T
Q  115 gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||| | ||||||| ||||| || || |||||||||||||||| |||||    
T  22287648 gtattaaagtaaactttgagatatagggggctgaaacaagggtttagaa 22287600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 15 - 163
Target Start/End: Complemental strand, 43623979 - 43623832
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatctt 114  Q
    |||||||||||||||| ||||||| ||||||||||||||||||| |||| |||||||||| |||||||||||| |||||||||||||||| ||||| |||    
T  43623979 gtggcacgatggtgcgctggcagcaaataacataaacgtatttt-gggtgcagatttgttccaaattttaagcaatacttttactataaaaatagacctt 43623881  T
Q  115 gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||||||||||   ||| ||||| ||| |||||||| ||| |||||    
T  43623880 gtatcagagtaaactgggagatagaggggggtgaaacaatggtttagaa 43623832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 19504771 - 19504609
Alignment:
Q  1 gatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttacta 100  Q
    ||||||||| ||  |||||||||||||||| ||||  ||||||||| ||||  |||||| ||| |||||||||| ||||||||||| || ||||||||||    
T  19504771 gatggggtcgcatcgtggcacgatggtgcgctggcgacgaataacagaaacacatttttaggtgcagatttgttccaaattttaagggaaacttttacta 19504672  T
Q  101 taaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||| |||||||||||| |||| | ||| ||||| |||||||||||||||| |||||    
T  19504671 taaatatagaccttgtatcagagcaaacttggagatagagggggctgaaacaagggtttagaa 19504609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 6259241 - 6259079
Alignment:
Q  1 gatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttacta 100  Q
    |||||| || ||| ||| |||||||||||| |||| | |||||||| |||| ||||||||||| |||| ||||| |||||||||||||||||||||||||    
T  6259241 gatgggatcgcaacgtgacacgatggtgcgctggcggtgaataacagaaacatatttttgggtgcagacttgttccaaattttaagcgatacttttacta 6259142  T
Q  101 taaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||| ||||||| ||| ||||| ||||| |||||  || ||||||||| || |||||    
T  6259141 taaatatagaccttgtattagactaaactttgagatagaggaggatgaaacaagagtttagaa 6259079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 19502437 - 19502275
Alignment:
Q  1 gatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttacta 100  Q
    ||||||||| ||  |||||||||||||||| ||||  ||||||||| |||| ||||||||| | |||||||| | ||||||||||| || | ||||||||    
T  19502437 gatggggtcgcatcgtggcacgatggtgcgctggcgacgaataacagaaacatatttttggttgcagatttgatccaaattttaagggaaaattttacta 19502338  T
Q  101 taaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||| |||||||||||| |||| | ||| || || ||||||||||||| || |||||    
T  19502337 taaatatagaccttgtatcagagcaaacttggagataaagggggctgaaacaagagtttagaa 19502275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 163
Target Start/End: Complemental strand, 18800713 - 18800566
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatctt 114  Q
    |||||||||||||||| | |  ||||| |||| |||| |||||||  || |||||||||| |||||||||| |||||||||||||||||||||||| |||    
T  18800713 gtggcacgatggtgcgctagaggcgaa-aacagaaacatatttttaagtgcagatttgttccaaattttaaacgatacttttactataaatatagacctt 18800615  T
Q  115 gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||| |||||| | ||| || || |||||||||||||||| |||||    
T  18800614 gtatcagggtaaacatggagatatagggggctgaaacaagggtttagaa 18800566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 37 - 142
Target Start/End: Original strand, 35107165 - 35107270
Alignment:
Q  37 gcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagct 136  Q
    ||||||||||||| |||||||||   | |||||||||| ||||||||||| |||||||||||||||||||||||  |||||||| ||||||||||||| |    
T  35107165 gcgaataacataatcgtatttttcaatgcagatttgttccaaattttaagggatacttttactataaatatagacattgtatcatagtaaaccttgaggt 35107264  T
Q  137 agagag 142  Q
    ||||||    
T  35107265 agagag 35107270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 40 - 153
Target Start/End: Complemental strand, 12342797 - 12342684
Alignment:
Q  40 aataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctaga 139  Q
    |||||||||| | ||||||||||  |||||||||| ||| ||||    ||||||||||||||||||||| |  |||||||||||||||||||||| ||||    
T  12342797 aataacataatcatatttttggggtcagatttgttccaatttttttaggatacttttactataaatatacacattgtatcagagtaaaccttgagataga 12342698  T
Q  140 gagggctgaaacaa 153  Q
    | ||||||||||||    
T  12342697 gggggctgaaacaa 12342684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 88 - 163
Target Start/End: Complemental strand, 37963266 - 37963191
Alignment:
Q  88 gatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||||||||||||||  |||||| ||||||||||||||| ||||| |||||||||||||||| |||||    
T  37963266 gatacttttactataaatatagactttgtataagagtaaaccttgagatagagggggctgaaacaagggtttagaa 37963191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 163
Target Start/End: Complemental strand, 11578485 - 11578368
Alignment:
Q  48 aaacgtattttt-gggtccagatttgtttcaaattttaagcgata-cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggc 145  Q
    |||||||||||| ||| || |||||||| ||| |||| || |||  ||||||||||||||||||| ||| |||||| ||||| |||||| ||||| ||||    
T  11578485 aaacgtatttttaggggcctgatttgttccaatttttgagggattgcttttactataaatatagaccttatatcagggtaaatcttgagatagagtgggc 11578386  T
Q  146 tgaaacaagggtatagaa 163  Q
    |||||||||||| |||||    
T  11578385 tgaaacaagggtttagaa 11578368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 48 - 163
Target Start/End: Original strand, 22874018 - 22874133
Alignment:
Q  48 aaacgtatttttgggtccagatttgtttcaaattt-taagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggct 146  Q
    ||||||||||||||| ||||||||||||||| ||| | || | ||||||| ||||||||| ||   ||||||||||| |||||| ||| ||||| |||||    
T  22874018 aaacgtatttttggg-ccagatttgtttcaattttatgagggttacttttgctataaatacaggctttgtatcagagcaaacctggagatagagggggct 22874116  T
Q  147 gaaacaagggtatagaa 163  Q
    ||||||||||| |||||    
T  22874117 gaaacaagggtttagaa 22874133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 17849037 - 17849108
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||||||||||||| |  ||||||||| |||||||||||| ||||| |||||||||||||||| |||||    
T  17849037 cttttactataaatataaacattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaa 17849108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 19007560 - 19007631
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||||||||||||||   |||||||| ||||||||||||| ||||| |||||||||||||||| |||||    
T  19007560 cttttactataaatataggctttgtatcatagtaaaccttgagatagagggggctgaaacaagggtttagaa 19007631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 163
Target Start/End: Complemental strand, 31733100 - 31733029
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||||||||||  ||||| |||||||||| ||||| ||||| |||||||||||||||| |||||    
T  31733100 cttttactataaatatagactttgtaacagagtaaacattgagatagagggggctgaaacaagggtttagaa 31733029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 93 - 166
Target Start/End: Complemental strand, 15539809 - 15539736
Alignment:
Q  93 ttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatga 166  Q
    ||||||||||||||||||  ||||||||| |||||||||||| || || ||| |||||||||||| ||||||||    
T  15539809 ttttactataaatatagacattgtatcagtgtaaaccttgagatatagggggttgaaacaagggtttagaatga 15539736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 45280322 - 45280249
Alignment:
Q  90 tacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||| |||||||||||| | |||||||||||| |||| ||||| ||||| |||||||||||||||| |||||    
T  45280322 tactttcactataaatatataccttgtatcagagcaaactttgagatagagggggctgaaacaagggtttagaa 45280249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 163
Target Start/End: Complemental strand, 11739895 - 11739824
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||||||||||  |||||| || |||||||||||| ||||| |||||| ||||||||| |||||    
T  11739895 cttttactataaatatagacattgtattagtgtaaaccttgagatagagggggctggaacaagggtttagaa 11739824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 155
Target Start/End: Complemental strand, 22163282 - 22163219
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagg 155  Q
    |||||||||||||||||||  ||||||||| |||||| ||||| ||||| ||||||||||||||    
T  22163282 cttttactataaatatagacattgtatcagtgtaaactttgagatagagggggctgaaacaagg 22163219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 89 - 165
Target Start/End: Complemental strand, 42923849 - 42923771
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaacctt--gagctagagagggctgaaacaagggtatagaatg 165  Q
    |||||||||||||||||||||| |||| |||| ||||||||||  ||| |||||  ||||||||||||||| |||||||    
T  42923849 atacttttactataaatatagaccttgaatcatagtaaaccttgagagatagaggaggctgaaacaagggtttagaatg 42923771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 157
Target Start/End: Original strand, 3022086 - 3022148
Alignment:
Q  95 ttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggt 157  Q
    ||||||||||||||||  |||||||||||||||||||||| || ||  |||||||||||||||    
T  3022086 ttactataaatatagactttgtatcagagtaaaccttgagatataggaggctgaaacaagggt 3022148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 134
Target Start/End: Original strand, 40699226 - 40699272
Alignment:
Q  88 gatacttttactataaatatagatcttgtatcagagtaaaccttgag 134  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||    
T  40699226 gatacttttactataaatatagaccttgcatcagagtaaaccttgag 40699272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 163
Target Start/End: Original strand, 42452700 - 42452774
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||||| ||||||||||||  ||||||||||| |||| | ||| ||||| |||||||||||||||| |||||    
T  42452700 atacttttattataaatatagacattgtatcagagcaaacttggagatagagggggctgaaacaagggtttagaa 42452774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 14837193 - 14837258
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggt 157  Q
    |||||||| ||||||||||  ||||||||| |||||||||||| ||||| | ||||||||||||||    
T  14837193 cttttactgtaaatatagacattgtatcagtgtaaaccttgagatagagggagctgaaacaagggt 14837258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 65 - 122
Target Start/End: Complemental strand, 28462648 - 28462591
Alignment:
Q  65 cagatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcaga 122  Q
    |||||||||| ||||||||||| | ||||||||||||||||||| | |||||||||||    
T  28462648 cagatttgttccaaattttaagggttacttttactataaatataaaccttgtatcaga 28462591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 142
Target Start/End: Original strand, 35028473 - 35028550
Alignment:
Q  66 agatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcaga-gtaaaccttgagctagagag 142  Q
    ||||||||| ||| |||| || |||||||||||||||||||||||  |||||||||| |||||||||||  |||||||    
T  35028473 agatttgttccaattttttagggatacttttactataaatatagacattgtatcagatgtaaaccttgaattagagag 35028550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 163
Target Start/End: Original strand, 28196513 - 28196628
Alignment:
Q  48 aaacgtatttttgggtccagatttgtttcaaattt-taagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggct 146  Q
    ||||||||||||||| || |||||  ||| ||||| | || ||| |||||||||||||||||    |||||||||||||||| ||||| ||||| |||||    
T  28196513 aaacgtatttttggg-cctgattttgttccaatttatgagggattcttttactataaatatatgctttgtatcagagtaaacattgagatagagggggct 28196611  T
Q  147 gaaacaagggtatagaa 163  Q
    ||||||| ||| |||||    
T  28196612 gaaacaaaggtttagaa 28196628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 142
Target Start/End: Complemental strand, 17897581 - 17897526
Alignment:
Q  88 gatacttttactataaatatagatcttgtatcaga-gtaaaccttgagctagagag 142  Q
    ||||||||||||||||||||||| ||||||||||| ||||| |||||| |||||||    
T  17897581 gatacttttactataaatatagaccttgtatcagatgtaaaacttgaggtagagag 17897526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 134
Target Start/End: Complemental strand, 20147082 - 20147041
Alignment:
Q  93 ttttactataaatatagatcttgtatcagagtaaaccttgag 134  Q
    |||||||||||||||||| ||||||||| |||||||||||||    
T  20147082 ttttactataaatatagaccttgtatcaaagtaaaccttgag 20147041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 120
Target Start/End: Original strand, 45156922 - 45156999
Alignment:
Q  43 aacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatca 120  Q
    ||||||||||||||||| ||    |||||||| |||||||| || ||| ||||||||||||||||||| ||| |||||    
T  45156922 aacataaacgtatttttaggcgtggatttgttccaaattttgagggatgcttttactataaatatagaccttatatca 45156999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 131
Target Start/End: Complemental strand, 20146946 - 20146903
Alignment:
Q  88 gatacttttactataaatatagatcttgtatcagagtaaacctt 131  Q
    |||| |||||||||||||||||| ||||||||| ||||||||||    
T  20146946 gatatttttactataaatatagaccttgtatcaaagtaaacctt 20146903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 163
Target Start/End: Complemental strand, 34979906 - 34979843
Alignment:
Q  100 ataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||  |||||| || |||||||||||| ||||| ||||||||||||| || |||||    
T  34979906 ataaatatagacattgtattagtgtaaaccttgagatagagggggctgaaacaagcgtttagaa 34979843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 134
Target Start/End: Original strand, 20589581 - 20589623
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgag 134  Q
    ||||||||||||||||||| |||||||||||  ||||||||||    
T  20589581 cttttactataaatatagaccttgtatcagatgaaaccttgag 20589623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 163
Target Start/End: Original strand, 38020064 - 38020134
Alignment:
Q  93 ttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||||||||||||||  ||||||| | |||||||| ||| ||||| ||| || ||||||||| |||||    
T  38020064 ttttactataaatatagacattgtatcggtgtaaacctggagatagagggggttggaacaagggtttagaa 38020134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 134
Target Start/End: Complemental strand, 23452579 - 23452534
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaaccttgag 134  Q
    |||||||||||||||||||||| ||||||||||  ||||| |||||    
T  23452579 atacttttactataaatatagaccttgtatcaggctaaactttgag 23452534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 134
Target Start/End: Complemental strand, 35215934 - 35215889
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaaccttgag 134  Q
    |||||||||||||||||||||| ||||||||||  ||||| |||||    
T  35215934 atacttttactataaatatagaccttgtatcaggctaaactttgag 35215889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 134
Target Start/End: Complemental strand, 13828701 - 13828633
Alignment:
Q  66 agatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgag 134  Q
    ||||||||| ||| |||| || ||| |||||||||||||||||||  |||||| |||  ||||||||||    
T  13828701 agatttgttccaattttttagggattcttttactataaatatagaagttgtatgagatgaaaccttgag 13828633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 103; Significance: 2e-51; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 15072619 - 15072781
Alignment:
Q  1 gatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttacta 100  Q
    |||||| || ||| |||||| ||||||||| ||||||||||||||| |||||||||||||||| || ||||||| |||||||||||||||||||||||||    
T  15072619 gatgggatcgcaacgtggcatgatggtgcgctggcagcgaataacagaaacgtatttttgggtgcaaatttgttccaaattttaagcgatacttttacta 15072718  T
Q  101 taaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||| ||||||||||| ||||| ||||| ||||| |||||||||||||||| |||||    
T  15072719 taaatatagaccttgtatcagactaaactttgagatagagggggctgaaacaagggtttagaa 15072781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 14807661 - 14807822
Alignment:
Q  1 gatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttacta 100  Q
    ||||||||| ||  |||||||| ||||||| |||||||||| |||||||||||||||| | || |||||||||| |||||||||||||||||||||||||    
T  14807661 gatggggtcgcatcgtggcacggtggtgcgctggcagcgaaaaacataaacgtatttt-gagtgcagatttgttccaaattttaagcgatacttttacta 14807759  T
Q  101 taaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||| |||||||||||| |||| ||||| ||||| |||||||||||||||| |||||    
T  14807760 taaatatagaccttgtatcagagcaaactttgagatagagggggctgaaacaagggtttagaa 14807822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 15067890 - 15068052
Alignment:
Q  1 gatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttacta 100  Q
    |||||| || ||| |||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  15067890 gatgggatcgcaacgtggcacgatggtgcgctggcagcgaataacaaaaacgtatttttgggtgcagatttgttccaaattttaagcgatacttttacta 15067989  T
Q  101 taaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||| | |||||||||   ||||| ||||| ||||  |||||||||||||||| |||||    
T  15067990 taaatataaaccttgtatcaacctaaactttgagatagaaggggctgaaacaagggtttagaa 15068052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 15 - 165
Target Start/End: Complemental strand, 28251978 - 28251829
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatctt 114  Q
    |||| |||||||||||||||||||||| |||| ||||||||||| | || |||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  28251978 gtggtacgatggtgcgttggcagcgaaaaacagaaacgtatttt-gagtgcagatttgttccaaattttaagcgatacttttactataaatatagacctt 28251880  T
Q  115 gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatg 165  Q
    |||||| ||||||| ||||| ||||| ||| |||||||||||| |||||||    
T  28251879 gtatcatagtaaactttgagatagagtgggttgaaacaagggtttagaatg 28251829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 15 - 163
Target Start/End: Original strand, 27826909 - 27827057
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatctt 114  Q
    |||||||||||||||| |||||||||| |||| |||| |||||||| || |||||||||| ||||||||||||||||||||||||||||||||||  |||    
T  27826909 gtggcacgatggtgcgctggcagcgaaaaacaaaaacatatttttgagtgcagatttgttccaaattttaagcgatacttttactataaatataggcctt 27827008  T
Q  115 gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||||| |||| | ||| ||||| |||||||||||||||| |||||    
T  27827009 gtatcagagcaaacttggagatagagggggctgaaacaagggtttagaa 27827057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 15 - 163
Target Start/End: Original strand, 27829220 - 27829368
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatctt 114  Q
    |||||||||||||||| |||||||||| |||| |||| |||||||| || |||||||||| ||||||||||||||||||||||||||||||||||  |||    
T  27829220 gtggcacgatggtgcgctggcagcgaaaaacaaaaacatatttttgagtgcagatttgttccaaattttaagcgatacttttactataaatataggcctt 27829319  T
Q  115 gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||||| |||| | ||| ||||| |||||||||||||||| |||||    
T  27829320 gtatcagagcaaacttggagatagagggggctgaaacaagggtttagaa 27829368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 15 - 155
Target Start/End: Original strand, 4423941 - 4424081
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatctt 114  Q
    |||||||||||||||| |||||||||| || | |||| |||||||| || |||||||||| ||||||||||||||||||||||||||||||| ||| |||    
T  4423941 gtggcacgatggtgcgctggcagcgaaaaatagaaacatatttttgagtgcagatttgttccaaattttaagcgatacttttactataaatacagacctt 4424040  T
Q  115 gtatcagagtaaaccttgagctagagagggctgaaacaagg 155  Q
    ||||||||| |||| ||||| ||||| ||||||||||||||    
T  4424041 gtatcagagcaaactttgagatagagggggctgaaacaagg 4424081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 15 - 155
Target Start/End: Complemental strand, 2468510 - 2468370
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatctt 114  Q
    |||||||||||||||| |||  |||||||||| ||||||||||||  || |||||||||| ||||| ||||||||||||||||||||||||||||| |||    
T  2468510 gtggcacgatggtgcgctggatgcgaataacagaaacgtattttttagtgcagatttgttccaaatgttaagcgatacttttactataaatatagacctt 2468411  T
Q  115 gtatcagagtaaaccttgagctagagagggctgaaacaagg 155  Q
    |||||| ||||||| ||||| ||||| | ||||||||||||    
T  2468410 gtatcaaagtaaactttgagatagagggagctgaaacaagg 2468370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 15 - 163
Target Start/End: Complemental strand, 3886333 - 3886182
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtattttt---gggtccagatttgtttcaaattttaagcgatacttttactataaatatagat 111  Q
    |||| ||||||||| | ||||||||||||||| |||| |||||||   |||| || ||||||| |||||||||||||||||||||||||||||||||||     
T  3886333 gtggtacgatggtgtgctggcagcgaataacagaaacatattttttttgggtgcatatttgttccaaattttaagcgatacttttactataaatatagac 3886234  T
Q  112 cttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
     ||||||||||| |||| ||||| ||||| |||||||||||||||| |||||    
T  3886233 tttgtatcagagcaaactttgagatagagggggctgaaacaagggtttagaa 3886182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 15 - 163
Target Start/End: Complemental strand, 12517438 - 12517288
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatctt 114  Q
    |||||||||||||| | |||||||||| |||| |||| |||||||| || || ||||||| ||||||||||||||||||||||||||| ||||| | |||    
T  12517438 gtggcacgatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcaaatttgttccaaattttaagcgatacttttactatatatatatacctt 12517339  T
Q  115 gtatcagagtaaacctt--gagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||||| |||| ||  ||| ||||| |||||||||||||||| |||||    
T  12517338 gtatcagagcaaactttgagagatagagggggctgaaacaagggtttagaa 12517288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 65 - 163
Target Start/End: Original strand, 18810681 - 18810779
Alignment:
Q  65 cagatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||| |||| | ||| ||||| |||||||||||||||| |||||    
T  18810681 cagatttgttacaaattttaagggaaacttttactataaatatagatcttgtatcagagcaaacttggagatagagggggctgaaacaagggtttagaa 18810779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 65 - 163
Target Start/End: Original strand, 18812866 - 18812964
Alignment:
Q  65 cagatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||| |||| | ||| |||||  ||||||||||||||| |||||    
T  18812866 cagatttgttacaaattttaagggaaacttttactataaatatagatcttgtatcagagcaaacttggagatagaggaggctgaaacaagggtttagaa 18812964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 44 - 163
Target Start/End: Complemental strand, 13858868 - 13858748
Alignment:
Q  44 acataaacgtatttttgggtccagatttgtttcaaattt-taagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagag 142  Q
    |||||||| ||||||||||   ||||||  ||| ||||| | || |||||||||||||||||||||||  |||||||||||||||||||||| ||||| |    
T  13858868 acataaacatatttttgggctgagattttgttccaatttatgagggatacttttactataaatatagactttgtatcagagtaaaccttgagatagaggg 13858769  T
Q  143 ggctgaaacaagggtatagaa 163  Q
    || |||||||||||| |||||    
T  13858768 ggatgaaacaagggtttagaa 13858748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 88 - 163
Target Start/End: Complemental strand, 14419530 - 14419455
Alignment:
Q  88 gatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||||||||||||||  ||||||||| |||||||||||| ||||| |||||||||||||||| |||||    
T  14419530 gatacttttactataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaa 14419455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 65 - 163
Target Start/End: Original strand, 44720816 - 44720914
Alignment:
Q  65 cagatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||| || ||||||||| | |||||||||||||||||||| ||| ||||| || |||| ||||| ||||| |||||||||||||||| |||||    
T  44720816 cagatttgttacagattttaagcaagacttttactataaatatagaccttatatcaaagcaaactttgagatagagggggctgaaacaagggtttagaa 44720914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 89 - 166
Target Start/End: Original strand, 41382670 - 41382747
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatga 166  Q
    |||||||||||||||||||||| |||| |||||||||||||||||| ||||  ||||| |||||||||| ||||||||    
T  41382670 atacttttactataaatatagaccttgaatcagagtaaaccttgagatagatggggctaaaacaagggtttagaatga 41382747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 92 - 163
Target Start/End: Complemental strand, 5623073 - 5623002
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||||||||| | |||||||||| ||||||||||| ||||| |||||||||||||||| |||||    
T  5623073 cttttactataaatataggttttgtatcagaataaaccttgagatagagggggctgaaacaagggtttagaa 5623002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 92 - 163
Target Start/End: Complemental strand, 35872713 - 35872642
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||||||||||  ||||||||| |||||||||||| ||||| |||||||||||||||| |||||    
T  35872713 cttttactataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaa 35872642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 48 - 163
Target Start/End: Original strand, 1225122 - 1225237
Alignment:
Q  48 aaacgtatttttgggtccagatttgtttcaaattttaagcga--tacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggc 145  Q
    |||| |||||||||| ||||||||||| ||| ||||| | ||  ||||||||||||||||||||   ||||||||| |||||||||||| ||||| ||||    
T  1225122 aaacatatttttggg-ccagatttgttacaa-ttttatgggagttacttttactataaatataggcattgtatcagtgtaaaccttgagatagagggggc 1225219  T
Q  146 tgaaacaagggtatagaa 163  Q
    |||||||||||| |||||    
T  1225220 tgaaacaagggtttagaa 1225237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 43 - 163
Target Start/End: Complemental strand, 15186095 - 15185974
Alignment:
Q  43 aacataaacgtatttttgggtccagatttgtttcaaattt-taagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagaga 141  Q
    |||| ||||||||||| ||| | ||||||||| ||| ||| | || ||||||||||||||||||||| |  |||||||||||||||||||||| || ||     
T  15186095 aacagaaacgtattttcgggcctagatttgttccaattttatgagggatacttttactataaatataaactttgtatcagagtaaaccttgagataaagg 15185996  T
Q  142 gggctgaaacaagggtatagaa 163  Q
     | ||||||||||||| |||||    
T  15185995 tgactgaaacaagggtttagaa 15185974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 26775199 - 26775272
Alignment:
Q  90 tacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||||||||||||||||   ||||||||||| |||||||||| ||||| |||||||||||||||| |||||    
T  26775199 tacttttactataaatataggctttgtatcagagcaaaccttgagatagagggggctgaaacaagggtttagaa 26775272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 89 - 165
Target Start/End: Original strand, 181534 - 181610
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatg 165  Q
    ||||||||||||||||||||||  |||||||||| ||||| ||||| ||||| |||||||||||||||  |||||||    
T  181534 atacttttactataaatatagactttgtatcagactaaactttgagatagagggggctgaaacaagggcttagaatg 181610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 21482322 - 21482393
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||||||||||  |||||||||||||||| ||||| ||||| || ||||||||||||| |||||    
T  21482322 cttttactataaatatagaatttgtatcagagtaaactttgagatagagtggactgaaacaagggtttagaa 21482393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 163
Target Start/End: Complemental strand, 27107232 - 27107161
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||||||||||  |||||||||  ||||||||||| ||||| |||||||||||||||| |||||    
T  27107232 cttttactataaatatagacattgtatcagtataaaccttgagatagagggggctgaaacaagggtttagaa 27107161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 163
Target Start/End: Complemental strand, 33541723 - 33541652
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||||||||||  ||||||||| |||||| ||||| ||||| |||||||||||||||| |||||    
T  33541723 cttttactataaatatagacattgtatcagtgtaaacattgagatagagggggctgaaacaagggtttagaa 33541652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 65 - 122
Target Start/End: Original strand, 17847501 - 17847558
Alignment:
Q  65 cagatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcaga 122  Q
    |||||||||| |||||||| || ||||||||||||||||||||||| |||||||||||    
T  17847501 cagatttgttccaaattttgagggatacttttactataaatatagaccttgtatcaga 17847558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 89 - 166
Target Start/End: Original strand, 41384742 - 41384818
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatga 166  Q
    |||||||||||||||||||||| |||| |||| ||||||  ||||| ||||| |||||||||||||||| ||||||||    
T  41384742 atacttttactataaatatagaccttgaatcaaagtaaaaattgagatagag-gggctgaaacaagggtttagaatga 41384818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 14477276 - 14477347
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||||||||||||||   ||||||||||| |||||||||| ||||| ||| |||||||||||| |||||    
T  14477276 cttttactataaatataggctttgtatcagagcaaaccttgagatagagggggttgaaacaagggtttagaa 14477347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 25952521 - 25952592
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||||||||    ||||||||||| |||||||||| ||||| |||||||||||||||| |||||    
T  25952521 cttttactataaatataagctttgtatcagaggaaaccttgagatagagggggctgaaacaagggtttagaa 25952592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 88 - 163
Target Start/End: Original strand, 27911011 - 27911086
Alignment:
Q  88 gatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||||||| |||||||| ||  ||||||||  |||||||||||| ||||| |||||||||||||||| |||||    
T  27911011 gatacttttacaataaatattgacattgtatcaatgtaaaccttgagatagagggggctgaaacaagggtttagaa 27911086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 88 - 163
Target Start/End: Original strand, 27957430 - 27957505
Alignment:
Q  88 gatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||||||| |||||||| ||  ||||||||  |||||||||||| ||||| |||||||||||||||| |||||    
T  27957430 gatacttttacaataaatattgacattgtatcaatgtaaaccttgagatagagggggctgaaacaagggtttagaa 27957505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 93 - 163
Target Start/End: Original strand, 36865538 - 36865609
Alignment:
Q  93 ttttactataaatatagatcttgtatcaga-gtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||||||||||||||  |||||||||| ||||||||| || ||||| |||||||||||||||| |||||    
T  36865538 ttttactataaatatagacattgtatcagatgtaaaccttaagatagagggggctgaaacaagggtttagaa 36865609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 134
Target Start/End: Original strand, 6375985 - 6376031
Alignment:
Q  88 gatacttttactataaatatagatcttgtatcagagtaaaccttgag 134  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||    
T  6375985 gatacttttactataaatatagaccttgtatcagagtaaacattgag 6376031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 134
Target Start/End: Original strand, 31162209 - 31162255
Alignment:
Q  88 gatacttttactataaatatagatcttgtatcagagtaaaccttgag 134  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||    
T  31162209 gatacttttactataaatatagaccttgtatcatagtaaaccttgag 31162255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 44720731 - 44720816
Alignment:
Q  1 gatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagc 87  Q
    ||||||||| ||  |||||||||||||||| ||||||| || |||| |||| ||||||||||| |||||||||| || |||||||||    
T  44720731 gatggggtcgcatcgtggcacgatggtgcgctggcagcaaa-aacagaaacatatttttgggtgcagatttgttacagattttaagc 44720816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 163
Target Start/End: Original strand, 43530121 - 43530199
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaaccttgagc----tagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||||||||||||| |||||||||||| |||| |||||     ||||| |||||||||||||||| |||||    
T  43530121 atacttttactataaatatagaccttgtatcagagcaaactttgagagagatagagggggctgaaacaagggtttagaa 43530199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 134
Target Start/End: Original strand, 31035027 - 31035110
Alignment:
Q  51 cgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcaga-gtaaaccttgag 134  Q
    ||||||||||||  |||||||||| ||| |||| || |||| |||||||||||||||||| ||||||||||| |||||| |||||    
T  31035027 cgtatttttgggctcagatttgttccaattttttag-gatatttttactataaatatagaccttgtatcagatgtaaactttgag 31035110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 163
Target Start/End: Complemental strand, 5372512 - 5372442
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||| ||||||  ||||||||| ||||| |||||| ||||| |||||||||||||||| |||||    
T  5372512 cttttactataattatagacattgtatcagtgtaaatcttgagatagag-gggctgaaacaagggtttagaa 5372442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 163
Target Start/End: Complemental strand, 30480838 - 30480767
Alignment:
Q  92 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||||||||||  |||||| || |||||||||||| ||||  ||| |||||||||||| |||||    
T  30480838 cttttactataaatatagacattgtattagtgtaaaccttgagatagaaggggttgaaacaagggtttagaa 30480767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 163
Target Start/End: Original strand, 32339302 - 32339380
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaaccttgagc----tagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||||||||||||| ||||||||||  ||||| |||||     ||||| |||||||||||||||| |||||    
T  32339302 atacttttactataaatatagaccttgtatcaggctaaactttgagagagatagagggggctgaaacaagggtttagaa 32339380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 142
Target Start/End: Complemental strand, 14419834 - 14419782
Alignment:
Q  90 tacttttactataaatatagatcttgtatcagagtaaaccttgagctagagag 142  Q
    ||||||| |||||||||||||  ||||||||| |||||||||||| |||||||    
T  14419834 tacttttgctataaatatagacattgtatcagggtaaaccttgagatagagag 14419782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 165
Target Start/End: Complemental strand, 28283563 - 28283481
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaacctt------gagctagagagggctgaaacaagggtatagaatg 165  Q
    |||||||||||||||||||||| ||||||||||  ||||| ||      ||| ||||| |||||||||||||||| |||||||    
T  28283563 atacttttactataaatatagaccttgtatcaggctaaactttgagagagagatagagggggctgaaacaagggtttagaatg 28283481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 134
Target Start/End: Original strand, 15809212 - 15809257
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaaccttgag 134  Q
    |||||||||||||||||||||| ||||||||||  ||||| |||||    
T  15809212 atacttttactataaatatagaccttgtatcaggctaaactttgag 15809257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 134
Target Start/End: Complemental strand, 24873525 - 24873480
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaaccttgag 134  Q
    |||||||||||||||||||||| ||||||||||  ||||| |||||    
T  24873525 atacttttactataaatatagaccttgtatcaggctaaactttgag 24873480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 134
Target Start/End: Complemental strand, 22685003 - 22684959
Alignment:
Q  90 tacttttactataaatatagatcttgtatcagagtaaaccttgag 134  Q
    |||||| |||||||||||||| |||||||||||| |||| |||||    
T  22685003 tactttcactataaatatagaccttgtatcagagcaaactttgag 22684959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 37214514 - 37214474
Alignment:
Q  123 gtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||||| ||||| |||||||||||||||| |||||    
T  37214514 gtaaaccttgagatagagggggctgaaacaagggtttagaa 37214474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 121
Target Start/End: Original strand, 43081931 - 43081987
Alignment:
Q  65 cagatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcag 121  Q
    ||||||||||  | |||||||||   |||||||||||||||||||| ||||||||||    
T  43081931 cagatttgttatagattttaagcaggacttttactataaatatagaccttgtatcag 43081987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 101; Significance: 4e-50; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 14881 - 15033
Alignment:
Q  1 gatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttacta 100  Q
    |||||| |||||| ||| |||||||||||| ||||||||||||||| |||| ||||||||||| |||||||||| |||||||||||||||||||||||||    
T  14881 gatgggatcacaacgtgacacgatggtgcgctggcagcgaataacagaaacatatttttgggtgcagatttgttccaaattttaagcgatacttttacta 14980  T
Q  101 taaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaa 153  Q
    |||||||||| |||||||||||| |||| ||||| ||||| ||||||||||||    
T  14981 taaatatagaccttgtatcagagcaaactttgagatagagggggctgaaacaa 15033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 29023 - 29156
Alignment:
Q  1 gatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttacta 100  Q
    ||||||||| ||  |||||||||||||||| |||||||||| |||| |||| |||||||| || |||||||||| |||||||||||| | ||||||||||    
T  29023 gatggggtcgcatcgtggcacgatggtgcgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttacaaattttaagcaaaacttttacta 29122  T
Q  101 taaatatagatcttgtatcagagtaaaccttgag 134  Q
    |||||||||| ||||||||||  ||||| |||||    
T  29123 taaatatagaccttgtatcaggctaaactttgag 29156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 163
Target Start/End: Complemental strand, 69703 - 69555
Alignment:
Q  18 gcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatcttgta 117  Q
    ||||||||||| | |||||||||| |||| |||| |||||| |||| |||||||||| ||||||||||||||||||||||| ||||||||||| ||| ||    
T  69703 gcacgatggtgtgctggcagcgaaaaacagaaacatatttt-gggtgcagatttgttccaaattttaagcgatacttttacaataaatatagaccttata 69605  T
Q  118 tcagagtaaaccttgagc----tagagagggctgaaacaagggtatagaa 163  Q
    |||||| |||| |||||     ||||| |||||||||||||||| |||||    
T  69604 tcagagcaaactttgagagagatagagggggctgaaacaagggtttagaa 69555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 15 - 163
Target Start/End: Complemental strand, 73438 - 73287
Alignment:
Q  15 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatctt 114  Q
    |||||||||||||| | |||||||||| |||| |||| |||||| |||| |||||||||| ||||||||||| ||||||||||||||||||||||| | |    
T  73438 gtggcacgatggtgtgctggcagcgaaaaacagaaacatatttt-gggtgcagatttgttccaaattttaagagatacttttactataaatatagaccgt 73340  T
Q  115 gtatcagagtaaaccttgagc----tagagagggctgaaacaagggtatagaa 163  Q
    |||||| || |||| |||||     ||||| |||||||||||||||| |||||    
T  73339 gtatcaaaggaaactttgagagagatagagggggctgaaacaagggtttagaa 73287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0224 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 41 - 163
Target Start/End: Complemental strand, 16205 - 16082
Alignment:
Q  41 ataacataaacgtatttttgggtccagatttgtttcaaattt-taagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctaga 139  Q
    ||||||||| | ||||||||||   ||||||||| ||||||| | || |||||||||||||||||||||||| ||||||||||||||||||| || ||||    
T  16205 ataacataatcatatttttgggctgagatttgttccaaatttatgagggatacttttactataaatatagattttgtatcagagtaaaccttaagataga 16106  T
Q  140 gagggctgaaacaagggtatagaa 163  Q
    | ||| ||||| |||||| |||||    
T  16105 gggggttgaaataagggtttagaa 16082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 163
Target Start/End: Original strand, 79768 - 79883
Alignment:
Q  48 aaacgtatttttgggtccagatttgtttcaaattt-taagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggct 146  Q
    ||||||||||||||| || |||||  ||| ||||| | || ||| |||||||||||||||||| | ||||||||| |||||||||||| ||||| |||||    
T  79768 aaacgtatttttggg-cctgattttgttccaatttatgagggattcttttactataaatatagtttttgtatcagtgtaaaccttgagatagagggggct 79866  T
Q  147 gaaacaagggtatagaa 163  Q
    ||||||||||| |||||    
T  79867 gaaacaagggtttagaa 79883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 65 - 163
Target Start/End: Original strand, 6125 - 6223
Alignment:
Q  65 cagatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||| ||  ||||||||   |||||||||||||||||||| ||||||||| || |||| ||||| ||||| |||||||||||||||| |||||    
T  6125 cagatttgttacagtttttaagcaggacttttactataaatatagaccttgtatcaaagcaaactttgagatagagggggctgaaacaagggtttagaa 6223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 166
Target Start/End: Complemental strand, 11811 - 11734
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatga 166  Q
    |||||||||||||||||||||| |||| |||||||||||||| ||| ||||| ||||||||||| || | ||||||||    
T  11811 atacttttactataaatatagaccttgaatcagagtaaacctggagatagagggggctgaaacagggatttagaatga 11734  T

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Target: scaffold0552 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0552
Description:

Target: scaffold0552; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 66 - 163
Target Start/End: Complemental strand, 1194 - 1095
Alignment:
Q  66 agatttgtttcaaatt-ttaagcgat-acttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    ||||||||||||| || ||||| ||| ||||| |||||||||||||| |||||||||||| |||| ||||| ||||  |||||||||||||||| |||||    
T  1194 agatttgtttcaatttgttaagggattactttcactataaatatagaccttgtatcagagcaaactttgagatagaaggggctgaaacaagggtttagaa 1095  T

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Target: scaffold0031 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 89 - 163
Target Start/End: Original strand, 79135 - 79209
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||| ||||||||||||||||| |||| ||||||||||| |||||| ||||| ||||| |||||||||| |||||    
T  79135 atacctttactataaatatagaccttgaatcagagtaaaacttgagatagagggggctaaaacaagggtttagaa 79209  T

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Target: scaffold0038 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 41820 - 41747
Alignment:
Q  90 tacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||| |||||||||||||| |||||||||||| |||| | ||| ||||| |||||||||||||||| |||||    
T  41820 tactttcactataaatatagaccttgtatcagagcaaacttagagatagagggggctgaaacaagggtttagaa 41747  T

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Target: scaffold0005 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 183976 - 183904
Alignment:
Q  90 tacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||| |||||||||||||| ||||||||||||||||| ||||| |||| ||||||||||||| ||| |||||    
T  183976 tactttcactataaatatagaccttgtatcagagtaaactttgagataga-agggctgaaacaaaggtttagaa 183904  T

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Target: scaffold0005; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 89 - 165
Target Start/End: Original strand, 51959 - 52037
Alignment:
Q  89 atacttttactataaatatagatcttgtatcagagtaaacctt--gagctagagagggctgaaacaagggtatagaatg 165  Q
    |||||||||||||||||||||| ||||||||| | ||||| ||  ||| ||||| |||||||||||||||| |||||||    
T  51959 atacttttactataaatatagaccttgtatcatactaaactttgagagatagagggggctgaaacaagggtttagaatg 52037  T

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Target: scaffold0057 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 17021 - 16924
Alignment:
Q  53 tatttttgggtccagatttgtttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaa 150  Q
    |||||||| | | ||||||||||||| ||||    |||| ||||| |||||||||| | ||||||||||||||||||||||| |||||  ||||||||    
T  17021 tatttttgagcctagatttgtttcaatttttttaggataattttaatataaatataaaccttgtatcagagtaaaccttgagatagaggaggctgaaa 16924  T

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Target: scaffold0133 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 150
Target Start/End: Original strand, 4773 - 4825
Alignment:
Q  98 ctataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaa 150  Q
    ||||||||||||| ||||||||||||||||||||||| ||||| || ||||||    
T  4773 ctataaatatagaccttgtatcagagtaaaccttgagatagaggggtctgaaa 4825  T

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Target: scaffold0468 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 163
Target Start/End: Complemental strand, 1958 - 1895
Alignment:
Q  101 taaatatagatcttgtatcaga-gtaaaccttgagctagagagggctgaaacaagggtatagaa 163  Q
    |||||||||| ||||||||||| |||||||| ||| |||||  ||||||||||||||| |||||    
T  1958 taaatatagaccttgtatcagatgtaaacctagagatagaggtggctgaaacaagggtttagaa 1895  T

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