View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0305_low_27 (Length: 242)

Name: NF0305_low_27
Description: NF0305
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0305_low_27
NF0305_low_27
[»] scaffold0238 (3 HSPs)
scaffold0238 (89-202)||(24528-24647)
scaffold0238 (89-120)||(24671-24702)
scaffold0238 (166-202)||(24471-24507)
[»] chr7 (56 HSPs)
chr7 (89-202)||(48306076-48306195)
chr7 (89-202)||(15974062-15974181)
chr7 (89-202)||(48691773-48691892)
chr7 (89-202)||(46572776-46572895)
chr7 (95-145)||(30430548-30430598)
chr7 (95-145)||(43742303-43742353)
chr7 (98-145)||(32090039-32090086)
chr7 (98-145)||(39007220-39007267)
chr7 (99-145)||(5728734-5728780)
chr7 (95-145)||(6846719-6846769)
chr7 (95-145)||(24360552-24360602)
chr7 (95-145)||(26945654-26945704)
chr7 (95-141)||(41065909-41065955)
chr7 (95-145)||(44426652-44426702)
chr7 (98-145)||(32090082-32090129)
chr7 (98-145)||(48830210-48830257)
chr7 (95-145)||(27334924-27334974)
chr7 (99-145)||(31192500-31192546)
chr7 (95-145)||(31365325-31365375)
chr7 (95-145)||(32091318-32091368)
chr7 (95-145)||(48830386-48830436)
chr7 (102-145)||(25779503-25779546)
chr7 (98-141)||(27334970-27335013)
chr7 (98-145)||(44140501-44140548)
chr7 (98-145)||(46346147-46346194)
chr7 (95-145)||(7843659-7843709)
chr7 (95-145)||(10569746-10569796)
chr7 (95-145)||(32604850-32604900)
chr7 (95-145)||(38837669-38837719)
chr7 (95-145)||(39007174-39007224)
chr7 (95-145)||(45478368-45478418)
chr7 (95-145)||(46024824-46024874)
chr7 (98-145)||(34876234-34876281)
chr7 (95-141)||(5758088-5758134)
chr7 (95-145)||(6620673-6620723)
chr7 (95-145)||(42773740-42773790)
chr7 (99-145)||(46346105-46346151)
chr7 (102-145)||(32090000-32090043)
chr7 (98-145)||(34876191-34876238)
chr7 (106-145)||(34876277-34876316)
chr7 (89-120)||(48691727-48691758)
chr7 (167-202)||(48691904-48691939)
chr7 (99-145)||(10566145-10566191)
chr7 (99-145)||(33798508-33798554)
chr7 (99-145)||(34227820-34227866)
chr7 (95-145)||(44140455-44140505)
chr7 (117-145)||(6846625-6846653)
chr7 (117-145)||(24360419-24360447)
chr7 (117-145)||(25779370-25779398)
chr7 (117-145)||(32604767-32604795)
chr7 (117-145)||(38837586-38837614)
chr7 (117-145)||(41065814-41065842)
chr7 (117-145)||(44426769-44426797)
chr7 (117-145)||(46004387-46004415)
chr7 (92-120)||(46572904-46572932)
chr7 (117-145)||(48830253-48830281)
[»] scaffold0338 (2 HSPs)
scaffold0338 (89-202)||(6247-6366)
scaffold0338 (167-202)||(6378-6413)
[»] chr5 (41 HSPs)
chr5 (94-202)||(28069437-28069551)
chr5 (89-202)||(2826226-2826345)
chr5 (89-202)||(34329914-34330033)
chr5 (95-145)||(23155696-23155746)
chr5 (95-145)||(23334930-23334980)
chr5 (95-145)||(11376521-11376571)
chr5 (95-145)||(15059487-15059537)
chr5 (95-145)||(22671850-22671900)
chr5 (98-145)||(8949475-8949522)
chr5 (99-145)||(11660926-11660972)
chr5 (95-145)||(33857483-33857533)
chr5 (95-145)||(39086571-39086621)
chr5 (95-145)||(42746573-42746623)
chr5 (100-145)||(35915889-35915934)
chr5 (98-145)||(16668226-16668273)
chr5 (98-145)||(33868757-33868804)
chr5 (95-145)||(7286807-7286857)
chr5 (95-145)||(13363568-13363618)
chr5 (95-145)||(20134339-20134389)
chr5 (99-145)||(23155579-23155625)
chr5 (95-145)||(36864121-36864171)
chr5 (95-145)||(39166280-39166330)
chr5 (99-145)||(39861724-39861770)
chr5 (95-145)||(42746693-42746743)
chr5 (98-145)||(4675543-4675588)
chr5 (98-145)||(703861-703908)
chr5 (98-145)||(4675500-4675547)
chr5 (106-145)||(25016468-25016507)
chr5 (95-145)||(22830642-22830692)
chr5 (89-120)||(2826357-2826388)
chr5 (99-141)||(16668051-16668093)
chr5 (99-145)||(18464584-18464630)
chr5 (95-145)||(20696267-20696317)
chr5 (95-145)||(25191850-25191900)
chr5 (117-145)||(8949518-8949546)
chr5 (117-145)||(16552293-16552321)
chr5 (117-145)||(16668202-16668230)
chr5 (117-145)||(18464735-18464763)
chr5 (117-145)||(22830758-22830786)
chr5 (92-120)||(28069578-28069606)
chr5 (117-145)||(42512650-42512678)
[»] chr8 (69 HSPs)
chr8 (89-199)||(1209524-1209640)
chr8 (89-202)||(4835866-4835985)
chr8 (89-202)||(4841311-4841430)
chr8 (89-194)||(7058916-7059027)
chr8 (93-202)||(4835723-4835842)
chr8 (93-202)||(4841168-4841287)
chr8 (95-145)||(17656672-17656722)
chr8 (152-202)||(2750844-2750894)
chr8 (95-145)||(10586001-10586051)
chr8 (95-145)||(23397230-23397280)
chr8 (95-145)||(27506846-27506896)
chr8 (95-145)||(40022595-40022645)
chr8 (95-145)||(40246592-40246642)
chr8 (100-145)||(1672184-1672229)
chr8 (95-143)||(35448290-35448338)
chr8 (98-145)||(185935-185982)
chr8 (98-145)||(13526224-13526271)
chr8 (98-145)||(13615759-13615806)
chr8 (95-145)||(1773229-1773279)
chr8 (152-202)||(2750932-2750982)
chr8 (152-202)||(2751020-2751070)
chr8 (95-145)||(6783487-6783537)
chr8 (95-145)||(9853043-9853093)
chr8 (95-145)||(17792832-17792882)
chr8 (95-145)||(18161343-18161393)
chr8 (95-145)||(23504633-23504683)
chr8 (95-145)||(34343303-34343353)
chr8 (95-145)||(35301836-35301886)
chr8 (95-144)||(23940754-23940803)
chr8 (98-145)||(9852846-9852893)
chr8 (98-145)||(18026936-18026983)
chr8 (95-145)||(2523557-2523607)
chr8 (95-145)||(2541130-2541179)
chr8 (95-145)||(12356138-12356188)
chr8 (99-145)||(13526182-13526228)
chr8 (99-145)||(13615717-13615763)
chr8 (99-145)||(32644191-32644237)
chr8 (95-145)||(34647378-34647428)
chr8 (99-141)||(39022768-39022810)
chr8 (95-140)||(8439128-8439173)
chr8 (99-138)||(5106679-5106718)
chr8 (95-150)||(15260078-15260133)
chr8 (98-145)||(23397058-23397105)
chr8 (98-145)||(30652409-30652455)
chr8 (98-145)||(34647557-34647604)
chr8 (98-145)||(40022774-40022821)
chr8 (102-145)||(42434363-42434406)
chr8 (89-127)||(2751058-2751096)
chr8 (99-145)||(24473189-24473235)
chr8 (98-144)||(30652368-30652413)
chr8 (98-130)||(15809709-15809741)
chr8 (89-120)||(1209478-1209509)
chr8 (95-126)||(1672804-1672835)
chr8 (167-202)||(4835672-4835707)
chr8 (167-202)||(4841117-4841152)
chr8 (98-145)||(12356095-12356142)
chr8 (102-145)||(28698089-28698132)
chr8 (99-145)||(28979405-28979449)
chr8 (89-127)||(2750882-2750920)
chr8 (89-127)||(2750970-2751008)
chr8 (95-145)||(7614606-7614656)
chr8 (117-145)||(2541045-2541073)
chr8 (117-145)||(9852889-9852917)
chr8 (117-145)||(17656788-17656816)
chr8 (105-145)||(30652451-30652491)
chr8 (117-145)||(34647533-34647561)
chr8 (117-145)||(35301991-35302019)
chr8 (117-145)||(39022631-39022659)
chr8 (117-145)||(40022750-40022778)
[»] chr6 (40 HSPs)
chr6 (92-202)||(24736775-24736891)
chr6 (89-202)||(877975-878094)
chr6 (89-202)||(878118-878237)
chr6 (89-202)||(33345532-33345651)
chr6 (98-145)||(16967558-16967605)
chr6 (95-145)||(7765191-7765241)
chr6 (99-145)||(18611951-18611997)
chr6 (95-145)||(22857617-22857667)
chr6 (98-145)||(10588896-10588943)
chr6 (95-145)||(10698717-10698768)
chr6 (98-145)||(15008248-15008295)
chr6 (98-145)||(29157781-29157828)
chr6 (95-145)||(19281424-19281474)
chr6 (95-145)||(25119410-25119460)
chr6 (95-145)||(30387140-30387190)
chr6 (100-145)||(15008074-15008119)
chr6 (98-145)||(4102620-4102667)
chr6 (98-145)||(4338215-4338262)
chr6 (98-145)||(22031737-22031784)
chr6 (98-145)||(30909201-30909248)
chr6 (95-145)||(4338126-4338176)
chr6 (95-145)||(7371038-7371088)
chr6 (107-145)||(18611775-18611813)
chr6 (99-145)||(21384933-21384979)
chr6 (95-145)||(26713114-26713164)
chr6 (95-145)||(27079726-27079776)
chr6 (98-145)||(4338172-4338219)
chr6 (98-145)||(28129369-28129416)
chr6 (95-145)||(11140396-11140446)
chr6 (99-145)||(29163316-29163362)
chr6 (100-145)||(4102445-4102490)
chr6 (104-145)||(30909377-30909418)
chr6 (99-130)||(4102664-4102695)
chr6 (99-145)||(14237923-14237969)
chr6 (168-202)||(18612184-18612218)
chr6 (95-145)||(20522788-20522838)
chr6 (169-202)||(33345487-33345520)
chr6 (117-145)||(18611818-18611846)
chr6 (166-202)||(24736712-24736748)
chr6 (117-145)||(25119152-25119180)
[»] chr2 (56 HSPs)
chr2 (89-202)||(18297377-18297496)
chr2 (89-202)||(4578891-4579009)
chr2 (93-202)||(25193583-25193698)
chr2 (93-202)||(25193714-25193829)
chr2 (91-202)||(14550626-14550743)
chr2 (89-202)||(2264377-2264496)
chr2 (93-190)||(2264258-2264361)
chr2 (93-202)||(4578765-4578879)
chr2 (89-202)||(4579021-4579137)
chr2 (95-145)||(19246716-19246766)
chr2 (95-145)||(31711564-31711614)
chr2 (95-145)||(1095308-1095358)
chr2 (95-145)||(20661535-20661585)
chr2 (99-145)||(20710557-20710603)
chr2 (95-145)||(31783847-31783897)
chr2 (95-145)||(42364546-42364596)
chr2 (98-145)||(4281220-4281267)
chr2 (98-141)||(39548441-39548484)
chr2 (95-145)||(16111567-16111617)
chr2 (95-145)||(30777466-30777516)
chr2 (95-145)||(36636150-36636200)
chr2 (99-145)||(37867208-37867254)
chr2 (95-145)||(41345294-41345344)
chr2 (95-145)||(43823470-43823520)
chr2 (98-138)||(13081317-13081357)
chr2 (105-145)||(34726746-34726786)
chr2 (98-145)||(3928218-3928265)
chr2 (98-145)||(28056012-28056059)
chr2 (98-145)||(44341888-44341935)
chr2 (99-145)||(3147230-3147276)
chr2 (99-145)||(4281044-4281090)
chr2 (99-145)||(12449187-12449233)
chr2 (95-145)||(22588458-22588508)
chr2 (95-145)||(35126633-35126683)
chr2 (99-145)||(41345474-41345520)
chr2 (99-145)||(44915435-44915481)
chr2 (102-145)||(13081278-13081321)
chr2 (98-145)||(28049155-28049202)
chr2 (98-145)||(36636329-36636376)
chr2 (102-145)||(39548480-39548523)
chr2 (98-145)||(43823293-43823340)
chr2 (99-145)||(20193971-20194017)
chr2 (95-145)||(22596444-22596494)
chr2 (99-145)||(24183541-24183587)
chr2 (166-202)||(4578713-4578749)
chr2 (89-120)||(2264203-2264234)
chr2 (167-202)||(2264508-2264543)
chr2 (167-202)||(4280870-4280905)
chr2 (98-141)||(16141414-16141457)
chr2 (167-202)||(25995910-25995945)
chr2 (167-202)||(43823705-43823740)
chr2 (99-145)||(20570818-20570864)
chr2 (100-145)||(16141459-16141504)
chr2 (98-139)||(21156529-21156570)
chr2 (105-145)||(16141378-16141418)
chr2 (117-145)||(20710424-20710452)
[»] chr1 (93 HSPs)
chr1 (89-202)||(23174604-23174723)
chr1 (91-202)||(23174737-23174854)
chr1 (89-202)||(180438-180557)
chr1 (89-202)||(180578-180697)
chr1 (92-145)||(23921142-23921195)
chr1 (89-202)||(11422303-11422422)
chr1 (95-145)||(21256047-21256097)
chr1 (98-145)||(28322610-28322657)
chr1 (95-145)||(11354451-11354501)
chr1 (95-145)||(18057583-18057633)
chr1 (95-145)||(18928832-18928882)
chr1 (95-145)||(23319235-23319285)
chr1 (95-145)||(31084189-31084239)
chr1 (95-145)||(32595158-32595208)
chr1 (95-145)||(33157045-33157095)
chr1 (99-145)||(37642904-37642950)
chr1 (95-145)||(45890391-45890441)
chr1 (95-145)||(47693806-47693856)
chr1 (98-145)||(2741519-2741566)
chr1 (98-145)||(30788790-30788837)
chr1 (98-145)||(31084012-31084059)
chr1 (98-145)||(35197599-35197646)
chr1 (95-145)||(1395218-1395268)
chr1 (95-145)||(12070550-12070600)
chr1 (95-145)||(14229301-14229351)
chr1 (95-145)||(17811137-17811187)
chr1 (95-145)||(18952526-18952576)
chr1 (95-145)||(19216611-19216661)
chr1 (95-145)||(20506516-20506566)
chr1 (95-145)||(28322564-28322614)
chr1 (95-145)||(29945271-29945321)
chr1 (95-145)||(31763829-31763879)
chr1 (95-145)||(35197420-35197470)
chr1 (95-145)||(44261132-44261182)
chr1 (95-143)||(30802979-30803027)
chr1 (98-145)||(16116479-16116526)
chr1 (98-145)||(19216568-19216615)
chr1 (98-145)||(23921323-23921370)
chr1 (98-145)||(31528998-31529045)
chr1 (98-145)||(33097822-33097869)
chr1 (98-145)||(51420868-51420915)
chr1 (98-145)||(51801051-51801098)
chr1 (102-148)||(2741559-2741605)
chr1 (152-202)||(4097235-4097285)
chr1 (103-145)||(9628547-9628589)
chr1 (95-145)||(14389898-14389948)
chr1 (95-145)||(16116655-16116705)
chr1 (95-145)||(17893213-17893263)
chr1 (95-145)||(35754623-35754673)
chr1 (95-145)||(44687778-44687828)
chr1 (99-145)||(45849253-45849299)
chr1 (98-145)||(19850661-19850708)
chr1 (102-145)||(31528959-31529002)
chr1 (98-145)||(44261089-44261136)
chr1 (98-145)||(44687867-44687914)
chr1 (98-145)||(51420911-51420958)
chr1 (102-145)||(51801012-51801055)
chr1 (99-145)||(6708371-6708417)
chr1 (99-145)||(9040995-9041041)
chr1 (99-145)||(10498040-10498086)
chr1 (95-145)||(12796483-12796533)
chr1 (99-145)||(32143712-32143758)
chr1 (99-145)||(51904826-51904872)
chr1 (98-145)||(10497866-10497911)
chr1 (89-120)||(180398-180429)
chr1 (166-201)||(180710-180745)
chr1 (167-202)||(8401562-8401597)
chr1 (89-120)||(8401609-8401640)
chr1 (98-145)||(16116436-16116483)
chr1 (98-141)||(20506694-20506737)
chr1 (98-141)||(23277352-23277395)
chr1 (167-202)||(23921092-23921127)
chr1 (89-120)||(34370346-34370377)
chr1 (167-202)||(34370392-34370427)
chr1 (167-202)||(35197202-35197237)
chr1 (98-145)||(44687824-44687871)
chr1 (95-145)||(24368469-24368519)
chr1 (95-145)||(30788833-30788883)
chr1 (95-145)||(46590699-46590749)
chr1 (91-120)||(11422248-11422277)
chr1 (98-139)||(37227258-37227299)
chr1 (117-145)||(10497907-10497935)
chr1 (117-145)||(14390014-14390042)
chr1 (117-145)||(16116522-16116550)
chr1 (117-145)||(17893118-17893146)
chr1 (117-145)||(21256201-21256229)
chr1 (117-145)||(23277328-23277356)
chr1 (117-145)||(23921299-23921327)
chr1 (117-145)||(24368586-24368614)
chr1 (117-145)||(31084055-31084083)
chr1 (117-145)||(35754738-35754766)
chr1 (117-145)||(37642772-37642800)
chr1 (117-145)||(45849154-45849182)
[»] chr3 (58 HSPs)
chr3 (89-202)||(19384583-19384701)
chr3 (89-202)||(52986695-52986814)
chr3 (89-202)||(52986826-52986945)
chr3 (89-202)||(31852905-31853024)
chr3 (93-202)||(50754784-50754899)
chr3 (93-202)||(50754915-50755030)
chr3 (89-202)||(51361715-51361834)
chr3 (93-202)||(7044574-7044687)
chr3 (98-145)||(23755885-23755932)
chr3 (95-145)||(8718901-8718951)
chr3 (95-145)||(9070788-9070838)
chr3 (95-145)||(16653550-16653600)
chr3 (95-145)||(19012445-19012495)
chr3 (95-145)||(27446153-27446203)
chr3 (95-145)||(47728957-47729007)
chr3 (95-145)||(47924306-47924356)
chr3 (95-145)||(51681419-51681469)
chr3 (95-144)||(12974131-12974180)
chr3 (101-145)||(53595444-53595488)
chr3 (98-145)||(28299512-28299559)
chr3 (95-145)||(23756061-23756111)
chr3 (95-145)||(41191616-41191666)
chr3 (100-145)||(16276904-16276949)
chr3 (98-145)||(23699877-23699924)
chr3 (98-145)||(23718332-23718379)
chr3 (98-145)||(23736788-23736835)
chr3 (98-145)||(28299555-28299602)
chr3 (98-145)||(39194554-39194601)
chr3 (98-145)||(41191796-41191843)
chr3 (95-145)||(8036929-8036979)
chr3 (99-145)||(28299470-28299516)
chr3 (99-145)||(34562610-34562656)
chr3 (99-145)||(36185849-36185895)
chr3 (99-145)||(49053370-49053416)
chr3 (98-138)||(53595494-53595534)
chr3 (98-141)||(34562787-34562830)
chr3 (95-145)||(9643038-9643088)
chr3 (95-145)||(14743597-14743647)
chr3 (95-145)||(38345334-38345384)
chr3 (95-145)||(51846214-51846264)
chr3 (167-202)||(7044511-7044546)
chr3 (167-202)||(19384536-19384571)
chr3 (89-120)||(50754741-50754772)
chr3 (167-202)||(50755046-50755081)
chr3 (167-202)||(51361668-51361703)
chr3 (89-120)||(51361842-51361873)
chr3 (89-120)||(52986957-52986988)
chr3 (102-145)||(53595530-53595573)
chr3 (99-145)||(8061557-8061603)
chr3 (99-145)||(30794903-30794949)
chr3 (167-201)||(52986636-52986670)
chr3 (112-145)||(9183781-9183814)
chr3 (98-139)||(11982808-11982849)
chr3 (117-145)||(19012532-19012560)
chr3 (117-145)||(23755928-23755956)
chr3 (117-145)||(34562763-34562791)
chr3 (117-145)||(35221594-35221622)
chr3 (117-145)||(36185772-36185800)
[»] chr4 (79 HSPs)
chr4 (89-202)||(38245646-38245765)
chr4 (89-202)||(10473241-10473359)
chr4 (89-202)||(10473371-10473490)
chr4 (89-202)||(45256611-45256730)
chr4 (89-202)||(638717-638836)
chr4 (93-145)||(50644490-50644542)
chr4 (95-145)||(12722878-12722928)
chr4 (95-145)||(17109859-17109909)
chr4 (95-145)||(21995724-21995774)
chr4 (95-145)||(54895458-54895508)
chr4 (95-145)||(6385733-6385783)
chr4 (95-145)||(8157229-8157279)
chr4 (95-145)||(9553068-9553118)
chr4 (95-145)||(25573595-25573645)
chr4 (89-180)||(26577458-26577554)
chr4 (95-145)||(27765053-27765103)
chr4 (95-145)||(31763048-31763098)
chr4 (99-145)||(36924295-36924341)
chr4 (95-145)||(50562891-50562941)
chr4 (98-145)||(6385779-6385826)
chr4 (98-145)||(29826090-29826137)
chr4 (95-145)||(2124485-2124535)
chr4 (95-145)||(8166018-8166068)
chr4 (95-145)||(10374097-10374147)
chr4 (99-145)||(16474964-16475010)
chr4 (95-145)||(18924051-18924101)
chr4 (95-145)||(21097906-21097956)
chr4 (99-141)||(30358628-30358670)
chr4 (95-145)||(37059855-37059905)
chr4 (95-145)||(43374501-43374551)
chr4 (100-145)||(22180430-22180475)
chr4 (100-145)||(49137340-49137385)
chr4 (98-142)||(25573641-25573685)
chr4 (98-145)||(1729007-1729054)
chr4 (95-138)||(4169200-4169243)
chr4 (102-145)||(29825918-29825961)
chr4 (98-145)||(38010504-38010551)
chr4 (99-145)||(1492726-1492772)
chr4 (95-145)||(6841960-6842010)
chr4 (95-145)||(8165902-8165952)
chr4 (99-145)||(36309470-36309516)
chr4 (99-145)||(48077317-48077363)
chr4 (100-145)||(43852156-43852201)
chr4 (101-145)||(25573687-25573731)
chr4 (98-142)||(49137513-49137557)
chr4 (102-141)||(16299386-16299425)
chr4 (98-145)||(33883426-33883473)
chr4 (99-145)||(6768457-6768503)
chr4 (164-202)||(9551769-9551807)
chr4 (99-145)||(9967814-9967860)
chr4 (95-145)||(20862336-20862386)
chr4 (99-145)||(24687037-24687083)
chr4 (95-145)||(27872939-27872989)
chr4 (99-145)||(36621182-36621228)
chr4 (99-145)||(47567950-47567996)
chr4 (99-145)||(52325158-52325203)
chr4 (100-145)||(16299339-16299384)
chr4 (167-202)||(638848-638883)
chr4 (167-202)||(10473502-10473537)
chr4 (98-145)||(50644313-50644360)
chr4 (167-202)||(51836475-51836510)
chr4 (89-120)||(51836522-51836553)
chr4 (114-144)||(9552196-9552226)
chr4 (99-145)||(24687080-24687126)
chr4 (107-145)||(30358413-30358451)
chr4 (95-145)||(30779646-30779696)
chr4 (99-145)||(42788619-42788665)
chr4 (95-145)||(53526305-53526355)
chr4 (95-145)||(53865118-53865168)
chr4 (95-132)||(562889-562926)
chr4 (117-145)||(4169060-4169088)
chr4 (117-145)||(12722784-12722812)
chr4 (117-145)||(21097774-21097802)
chr4 (117-145)||(22180580-22180608)
chr4 (117-145)||(27764922-27764950)
chr4 (117-145)||(29826066-29826094)
chr4 (117-145)||(38010547-38010575)
chr4 (117-145)||(50644356-50644384)
chr4 (117-145)||(53865213-53865241)
[»] scaffold0194 (1 HSPs)
scaffold0194 (95-145)||(28439-28489)
[»] scaffold0097 (2 HSPs)
scaffold0097 (99-145)||(14396-14442)
scaffold0097 (117-145)||(14263-14291)
[»] scaffold0249 (1 HSPs)
scaffold0249 (95-145)||(23673-23723)
[»] scaffold0019 (1 HSPs)
scaffold0019 (95-145)||(72567-72617)
[»] scaffold0009 (2 HSPs)
scaffold0009 (95-145)||(203132-203182)
scaffold0009 (117-145)||(203288-203316)
[»] scaffold0004 (1 HSPs)
scaffold0004 (95-145)||(96053-96103)
[»] scaffold0291 (1 HSPs)
scaffold0291 (95-145)||(9650-9700)
[»] scaffold0126 (1 HSPs)
scaffold0126 (95-145)||(37687-37737)
[»] scaffold0129 (1 HSPs)
scaffold0129 (99-144)||(20064-20109)
[»] scaffold0455 (1 HSPs)
scaffold0455 (98-145)||(7956-8003)
[»] scaffold0102 (1 HSPs)
scaffold0102 (95-145)||(33670-33720)
[»] scaffold0534 (1 HSPs)
scaffold0534 (97-145)||(9962-10010)
[»] scaffold0036 (2 HSPs)
scaffold0036 (99-145)||(108654-108700)
scaffold0036 (98-139)||(108571-108612)
[»] scaffold0031 (1 HSPs)
scaffold0031 (95-141)||(80807-80853)
[»] scaffold0023 (1 HSPs)
scaffold0023 (98-139)||(120310-120351)
[»] scaffold0664 (1 HSPs)
scaffold0664 (117-145)||(3124-3152)
[»] scaffold0516 (1 HSPs)
scaffold0516 (117-145)||(1218-1246)


Alignment Details
Target: scaffold0238 (Bit Score: 85; Significance: 1e-40; HSPs: 3)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 89 - 202
Target Start/End: Original strand, 24528 - 24647
Alignment:
Q  89 accggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcat 182  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       | |||||||||||||||||||||||||||||||    
T  24528 accggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaacccattttgctgtggaaatggtttccagaatcttcaatctcat 24627  T
Q  183 tatcaacaccgtcgttcatc 202  Q
     |||||||||||||||||||    
T  24628 catcaacaccgtcgttcatc 24647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 120
Target Start/End: Original strand, 24671 - 24702
Alignment:
Q  89 accggaatgccaaaaccattttgctgtggaaa 120  Q
    ||||||||||||||||||||||||||||||||    
T  24671 accggaatgccaaaaccattttgctgtggaaa 24702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 202
Target Start/End: Original strand, 24471 - 24507
Alignment:
Q  166 agaatcttcaatctcattatcaacaccgtcgttcatc 202  Q
    ||||||||||||||||| |||||| ||||||||||||    
T  24471 agaatcttcaatctcatcatcaacgccgtcgttcatc 24507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 85; Significance: 1e-40; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 89 - 202
Target Start/End: Complemental strand, 48306195 - 48306076
Alignment:
Q  89 accggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcat 182  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||       | |||||||||||||||||||||||||||||||    
T  48306195 accggaatgccaaaatcattttgctgtggaaatggtttctgtgagttgtactccaaacccattttgttgtggaaatggtttccagaatcttcaatctcat 48306096  T
Q  183 tatcaacaccgtcgttcatc 202  Q
    ||||||||||||||||||||    
T  48306095 tatcaacaccgtcgttcatc 48306076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 89 - 202
Target Start/End: Original strand, 15974062 - 15974181
Alignment:
Q  89 accggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcat 182  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||       | |||||||||||||||||||||||||||||||    
T  15974062 accggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaatccattttgctgtggaaatggtttccagaatcttcaatctcat 15974161  T
Q  183 tatcaacaccgtcgttcatc 202  Q
     |||||||||||||||||||    
T  15974162 catcaacaccgtcgttcatc 15974181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 89 - 202
Target Start/End: Complemental strand, 48691892 - 48691773
Alignment:
Q  89 accggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaacc------cgtatggaaatggtttccagaatcttcaatctcat 182  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||        |||||||||||||||||||||||||||||||||    
T  48691892 accggaatgtcaaaaccattttgctgtggaaatggtttttgtgagttgtactccaaacctattttgctatggaaatggtttccagaatcttcaatctcat 48691793  T
Q  183 tatcaacaccgtcgttcatc 202  Q
     |||||||||||||||||||    
T  48691792 catcaacaccgtcgttcatc 48691773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 89 - 202
Target Start/End: Original strand, 46572776 - 46572895
Alignment:
Q  89 accggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcat 182  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||       | |||||||||||||||||||||||||||||||    
T  46572776 accggaatgccaaaaccattttgttgtggaaatggtttctatgagttgtactccaaacccattttgttgtggaaatggtttccagaatcttcaatctcat 46572875  T
Q  183 tatcaacaccgtcgttcatc 202  Q
     ||||||| |||||||||||    
T  46572876 catcaacatcgtcgttcatc 46572895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 30430598 - 30430548
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30430598 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 30430548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 43742353 - 43742303
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43742353 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 43742303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 32090039 - 32090086
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  32090039 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 32090086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 39007220 - 39007267
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  39007220 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 39007267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 5728780 - 5728734
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  5728780 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 5728734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 6846719 - 6846769
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  6846719 atgccaaaaccattttgctgtggaaatggtttctatgagttgtactccaaa 6846769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 24360602 - 24360552
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  24360602 atgccaaaaccattttgatgtggaaatggtttctgtgagttgtactccaaa 24360552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 26945654 - 26945704
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  26945654 atgccaaaaccattttgctgtggaaatagtttctgtgagttgtactccaaa 26945704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 95 - 141
Target Start/End: Original strand, 41065909 - 41065955
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactc 141  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  41065909 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactc 41065955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 44426702 - 44426652
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  44426702 atgccaaaaccattttgctgtggaaatggtttatgtgagttgtactccaaa 44426652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 32090082 - 32090129
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  32090082 ccaaaaccattttgctgtggaaatggtttttgtgagttgtactccaaa 32090129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 48830257 - 48830210
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||    
T  48830257 ccaaaaccattttgctgtggaaatggtttctgtgtgttgtactccaaa 48830210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 27334924 - 27334974
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  27334924 atgccaaaatcattttgctgtggaaatggtttctgtgagttggactccaaa 27334974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 31192500 - 31192546
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||    
T  31192500 caaaaccattttgctgtggaaatggtttctgtgaattgtactccaaa 31192546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 31365375 - 31365325
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  31365375 atgccaaaaccattttgctgtggaaatggtttatgtgacttgtactccaaa 31365325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 32091368 - 32091318
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  32091368 atgccaaaaacattttgctgtggaaatagtttctgtgagttgtactccaaa 32091318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 48830436 - 48830386
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  48830436 atgccaaaaccattttgatgtggaaatagtttctgtgagttgtactccaaa 48830386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 145
Target Start/End: Complemental strand, 25779546 - 25779503
Alignment:
Q  102 aaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  25779546 aaccattttgctgtggaaatggtttctatgagttgtactccaaa 25779503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 98 - 141
Target Start/End: Original strand, 27334970 - 27335013
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactc 141  Q
    ||||||||||||||||||||||||||||||||||| ||||||||    
T  27334970 ccaaaaccattttgctgtggaaatggtttctgtgaattgtactc 27335013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 44140501 - 44140548
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||    
T  44140501 ccaaaaccattttgctgtggaaatagtttttgtgagttgtactccaaa 44140548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 46346147 - 46346194
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  46346147 ccaaaactattttgctgtgaaaatggtttctgtgagttgtactccaaa 46346194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 7843659 - 7843709
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||| ||||  ||||||||||||||||||||||    
T  7843659 atgccaaaaccattttgctgtgaaaataatttctgtgagttgtactccaaa 7843709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 10569796 - 10569746
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||| |||||||||||||||||  |||||||||||||||||    
T  10569796 atgccaaaaccattgtgctgtggaaatggttttggtgagttgtactccaaa 10569746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 32604850 - 32604900
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||||| |||||||||||||||||| || |||||||||    
T  32604850 atgccaaaaccattttgctttggaaatggtttctgtgaattatactccaaa 32604900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 38837669 - 38837719
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||||| |||||||||||||||||| || |||||||||    
T  38837669 atgccaaaaccattttgctttggaaatggtttctgtgaattatactccaaa 38837719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 39007174 - 39007224
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||||  |||||||||||| ||||||||||||||||||    
T  39007174 atgccaaaaccattttgcaatggaaatggtttatgtgagttgtactccaaa 39007224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 45478418 - 45478368
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||| ||||    
T  45478418 atgccaaaactattttgctgtgaaaatggtttctgtgagttgtacttcaaa 45478368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 46024874 - 46024824
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||| |||||||||||||||||| ||| ||||||||||||||||||    
T  46024874 atgccaaaatcattttgctgtggaaatgatttttgtgagttgtactccaaa 46024824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 34876281 - 34876234
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||| |  |||||||||||||||||||||||||||||||    
T  34876281 ccaaaaccatttttcaatggaaatggtttctgtgagttgtactccaaa 34876234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 141
Target Start/End: Complemental strand, 5758134 - 5758088
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactc 141  Q
    ||||||||| ||||||||||||||||||||||| | |||||||||||    
T  5758134 atgccaaaatcattttgctgtggaaatggtttcagggagttgtactc 5758088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 6620723 - 6620673
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||| |||| ||||||||||||||||||||||||||| ||||||| |||||    
T  6620723 atgcaaaaatcattttgctgtggaaatggtttctgtgtgttgtaccccaaa 6620673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 42773740 - 42773790
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||| |||||||||||||||||  |||||||||| ||||||    
T  42773740 atgccaaaaccattgtgctgtggaaatggttttggtgagttgtaatccaaa 42773790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 46346105 - 46346151
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||| |||||||||||||||||| |||| ||||||||    
T  46346105 caaaaccattttgcagtggaaatggtttctgtgggttggactccaaa 46346151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 145
Target Start/End: Original strand, 32090000 - 32090043
Alignment:
Q  102 aaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||| ||||||||| ||||||||||||| ||||||||    
T  32090000 aaccattttgcagtggaaatgatttctgtgagttggactccaaa 32090043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 34876238 - 34876191
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||| || || ||||||||| ||||||||||||||||||    
T  34876238 ccaaaaccatttttctatgaaaatggtttatgtgagttgtactccaaa 34876191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 145
Target Start/End: Complemental strand, 34876316 - 34876277
Alignment:
Q  106 attttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||| ||||||||||||||||||||||| ||||||||    
T  34876316 attttgcagtggaaatggtttctgtgagttggactccaaa 34876277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 120
Target Start/End: Complemental strand, 48691758 - 48691727
Alignment:
Q  89 accggaatgccaaaaccattttgctgtggaaa 120  Q
    ||||||||||||||||||||||||||||||||    
T  48691758 accggaatgccaaaaccattttgctgtggaaa 48691727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 202
Target Start/End: Complemental strand, 48691939 - 48691904
Alignment:
Q  167 gaatcttcaatctcattatcaacaccgtcgttcatc 202  Q
    |||||||||||||||| |||||||||||||||||||    
T  48691939 gaatcttcaatctcatcatcaacaccgtcgttcatc 48691904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 10566145 - 10566191
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||| ||||||||||||| |||  |||||||||||||||||    
T  10566145 caaaaccattgtgctgtggaaatgattttggtgagttgtactccaaa 10566191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 33798554 - 33798508
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||| |||||||||||||||||| ||| ||||||||||| ||||||    
T  33798554 caaaatcattttgctgtggaaatgatttatgtgagttgtattccaaa 33798508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 34227820 - 34227866
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||| ||||||| |||| ||||||||| ||||||||||||||||||    
T  34227820 caaaatcattttgttgtgaaaatggtttgtgtgagttgtactccaaa 34227866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 44140455 - 44140505
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||| |||||||||||||||||||||| | |||| || ||||||||    
T  44140455 atgccaaaatcattttgctgtggaaatggtttatatgagctggactccaaa 44140505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 6846625 - 6846653
Alignment:
Q  117 gaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||    
T  6846625 gaaatggtttctgtgagttgtactccaaa 6846653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Complemental strand, 24360447 - 24360419
Alignment:
Q  117 gaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||    
T  24360447 gaaatggtttctgtgagttgtactccaaa 24360419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Complemental strand, 25779398 - 25779370
Alignment:
Q  117 gaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||    
T  25779398 gaaatggtttctgtgagttgtactccaaa 25779370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 32604767 - 32604795
Alignment:
Q  117 gaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||    
T  32604767 gaaatggtttctgtgagttgtactccaaa 32604795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 38837586 - 38837614
Alignment:
Q  117 gaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||    
T  38837586 gaaatggtttctgtgagttgtactccaaa 38837614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 41065814 - 41065842
Alignment:
Q  117 gaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||    
T  41065814 gaaatggtttctgtgagttgtactccaaa 41065842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Complemental strand, 44426797 - 44426769
Alignment:
Q  117 gaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||    
T  44426797 gaaatggtttctgtgagttgtactccaaa 44426769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 46004387 - 46004415
Alignment:
Q  117 gaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||    
T  46004387 gaaatggtttctgtgagttgtactccaaa 46004415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 120
Target Start/End: Original strand, 46572904 - 46572932
Alignment:
Q  92 ggaatgccaaaaccattttgctgtggaaa 120  Q
    |||||||||||||||||||||||||||||    
T  46572904 ggaatgccaaaaccattttgctgtggaaa 46572932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Complemental strand, 48830281 - 48830253
Alignment:
Q  117 gaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||    
T  48830281 gaaatggtttctgtgagttgtactccaaa 48830253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 81; Significance: 3e-38; HSPs: 2)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 89 - 202
Target Start/End: Complemental strand, 6366 - 6247
Alignment:
Q  89 accggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcat 182  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       | |||||||||||||||||||||||||| ||||    
T  6366 accggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaacccattttgctgtggaaatggtttccagaatcttcaatttcat 6267  T
Q  183 tatcaacaccgtcgttcatc 202  Q
     |||||||||||||||||||    
T  6266 catcaacaccgtcgttcatc 6247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 202
Target Start/End: Complemental strand, 6413 - 6378
Alignment:
Q  167 gaatcttcaatctcattatcaacaccgtcgttcatc 202  Q
    |||||||||||||||| |||||||||||||||||||    
T  6413 gaatcttcaatctcatcatcaacaccgtcgttcatc 6378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 1e-37; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 94 - 202
Target Start/End: Original strand, 28069437 - 28069551
Alignment:
Q  94 aatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcattatca 187  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||       | ||||||||||||||||||||||||||||||| ||||    
T  28069437 aatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaacccattttgctgtggaaatggtttccagaatcttcaatctcatcatca 28069536  T
Q  188 acaccgtcgttcatc 202  Q
    |||||||||||||||    
T  28069537 acaccgtcgttcatc 28069551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 89 - 202
Target Start/End: Original strand, 2826226 - 2826345
Alignment:
Q  89 accggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcat 182  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||       | |||||||||||||||||||||||||| ||||    
T  2826226 accggaatgccaaaaccattttgctgtggaaatagtttctgtgagttgtactccaaatccattttgctgtggaaatggtttccagaatcttcaatatcat 2826325  T
Q  183 tatcaacaccgtcgttcatc 202  Q
     |||||||||||||||||||    
T  2826326 catcaacaccgtcgttcatc 2826345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 89 - 202
Target Start/End: Complemental strand, 34330033 - 34329914
Alignment:
Q  89 accggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcat 182  Q
    |||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||       | |||||||||||||||||||||||||||||||    
T  34330033 accggaatgccaaaaccattttgctgtggaaataatttttgtgagttgtactccaaacccattttactgtggaaatggtttccagaatcttcaatctcat 34329934  T
Q  183 tatcaacaccgtcgttcatc 202  Q
     |||||||||||||||||||    
T  34329933 catcaacaccgtcgttcatc 34329914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 23155746 - 23155696
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23155746 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 23155696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 23334930 - 23334980
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23334930 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 23334980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 11376521 - 11376571
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  11376521 atgccaaaaccattttgctgtggaaatggtttctgtgagttgttctccaaa 11376571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 15059537 - 15059487
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  15059537 atgccaaaaccattttgctgtggaaatagtttctgtgagttgtactccaaa 15059487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 22671900 - 22671850
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  22671900 atgccaaaaccattttgctgtggaaatggtttctatgagttgtactccaaa 22671850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 8949522 - 8949475
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  8949522 ccaaaaccattttgctgtggaaatggtttttgtgagttgtactccaaa 8949475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 11660926 - 11660972
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||    
T  11660926 caaaaccattttgctgtggaaatggtttctgtgagttgtattccaaa 11660972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 33857483 - 33857533
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  33857483 atgccaaaaccattttgttgtggaaatggtttctgtgaattgtactccaaa 33857533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 39086621 - 39086571
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  39086621 atgccaaaaccattttgttgtggaaatggtttttgtgagttgtactccaaa 39086571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 42746623 - 42746573
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  42746623 atgccaaaaccattttgctgtggaaatagtttatgtgagttgtactccaaa 42746573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 100 - 145
Target Start/End: Complemental strand, 35915934 - 35915889
Alignment:
Q  100 aaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  35915934 aaaaccattttgcagtggaaatggtttctgtgagttgtactccaaa 35915889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 16668226 - 16668273
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  16668226 ccaaaaccattttgctgaggaaatggtttttgtgagttgtactccaaa 16668273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 33868804 - 33868757
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  33868804 ccaaaaccattttgctgtggaaatgatttatgtgagttgtactccaaa 33868757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 7286857 - 7286807
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||| |||||||| ||||||||||||||||| |||||||||||||    
T  7286857 atgccaaaactattttgctatggaaatggtttctgtgtgttgtactccaaa 7286807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 13363618 - 13363568
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||  |||||||||||||||||||||||||| ||||||||||||    
T  13363618 atgccaaaactgttttgctgtggaaatggtttctgtgaattgtactccaaa 13363568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 20134339 - 20134389
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||| ||||||||||||||||||||| ||| ||||||||||||||||||    
T  20134339 atgccagaaccattttgctgtggaaatgatttatgtgagttgtactccaaa 20134389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 23155625 - 23155579
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||| |||||||||||| ||||||||||||||||||||||||||||    
T  23155625 caaaatcattttgctgtgaaaatggtttctgtgagttgtactccaaa 23155579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 36864171 - 36864121
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||| |||||||||||||||| |||||||||||||||| ||||||    
T  36864171 atgccaaaactattttgctgtggaaatagtttctgtgagttgtattccaaa 36864121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 39166280 - 39166330
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||| |||||||||||||| ||||||||||||||||||||| |||||||||    
T  39166280 atgctaaaaccattttgctatggaaatggtttctgtgagttatactccaaa 39166330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 39861724 - 39861770
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||    
T  39861724 caaaaccattttgctgtggaaatgatttatgtgagttgtactccaaa 39861770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 42746743 - 42746693
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||| |||||||||||||||||||||| |||| ||||||||||||||||||    
T  42746743 atgctaaaaccattttgctgtggaaatagtttatgtgagttgtactccaaa 42746693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 4675588 - 4675543
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||    
T  4675588 ccaaaaccattttgctgtggaaatggtt--tgtgagttgtactccaaa 4675543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 703861 - 703908
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||| ||||||||||||||| ||||||||||| ||||||    
T  703861 ccaaaaccattttactgtggaaatggtttttgtgagttgtattccaaa 703908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 4675547 - 4675500
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||| |||||| |||||||||||||| ||||||||||||||||||    
T  4675547 ccaaaacaattttgttgtggaaatggtttatgtgagttgtactccaaa 4675500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 145
Target Start/End: Original strand, 25016468 - 25016507
Alignment:
Q  106 attttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  25016468 attttgctgtggaaatggtttctgtgagttatactccaaa 25016507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 22830692 - 22830642
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||| ||||||  |||||||||||||| ||||||||||||||||||    
T  22830692 atgccaaaatcatttttttgtggaaatggtttatgtgagttgtactccaaa 22830642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 120
Target Start/End: Original strand, 2826357 - 2826388
Alignment:
Q  89 accggaatgccaaaaccattttgctgtggaaa 120  Q
    ||||||||||||||||||||||||||||||||    
T  2826357 accggaatgccaaaaccattttgctgtggaaa 2826388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 16668051 - 16668093
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgtgagttgtactc 141  Q
    |||||||||||| | ||||||||| ||||||||||||||||||    
T  16668051 caaaaccatttttccgtggaaatgatttctgtgagttgtactc 16668093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 18464584 - 18464630
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||| ||||||||||||  || ||||||||||||    
T  18464584 caaaaccattttgctgtagaaatggtttctccgacttgtactccaaa 18464630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 20696267 - 20696317
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||||| || ||||| ||| ||||| ||||||||||||    
T  20696267 atgccaaaaccattttgctctgaaaatgatttatgtgaattgtactccaaa 20696317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 25191850 - 25191900
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||| || ||||||||||||||  ||||||||||| |||||    
T  25191850 atgccaaaaccattgtgatgtggaaatggttttggtgagttgtacaccaaa 25191900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Complemental strand, 8949546 - 8949518
Alignment:
Q  117 gaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||    
T  8949546 gaaatggtttctgtgagttgtactccaaa 8949518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 16552293 - 16552321
Alignment:
Q  117 gaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||    
T  16552293 gaaatggtttctgtgagttgtactccaaa 16552321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 16668202 - 16668230
Alignment:
Q  117 gaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||    
T  16668202 gaaatggtttctgtgagttgtactccaaa 16668230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 18464735 - 18464763
Alignment:
Q  117 gaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||    
T  18464735 gaaatggtttctgtgagttgtactccaaa 18464763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Complemental strand, 22830786 - 22830758
Alignment:
Q  117 gaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||    
T  22830786 gaaatggtttctgtgagttgtactccaaa 22830758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 120
Target Start/End: Original strand, 28069578 - 28069606
Alignment:
Q  92 ggaatgccaaaaccattttgctgtggaaa 120  Q
    |||||||||||||||||||||||||||||    
T  28069578 ggaatgccaaaaccattttgctgtggaaa 28069606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Complemental strand, 42512678 - 42512650
Alignment:
Q  117 gaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||    
T  42512678 gaaatggtttctgtgagttgtactccaaa 42512650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 2e-36; HSPs: 69)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 89 - 199
Target Start/End: Complemental strand, 1209640 - 1209524
Alignment:
Q  89 accggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcat 182  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||       | |||||||||||||||||||||||||||||||    
T  1209640 accggaatgccaaaaccattttgctgtggaaatgatttctgtgagttgtactccaaacccattttgctgtggaaatggtttccagaatcttcaatctcat 1209541  T
Q  183 tatcaacaccgtcgttc 199  Q
     ||||||||||||||||    
T  1209540 catcaacaccgtcgttc 1209524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 89 - 202
Target Start/End: Original strand, 4835866 - 4835985
Alignment:
Q  89 accggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcat 182  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |       | ||||||||||||||| |||||||||||||||    
T  4835866 accggaatgccaaaaccatttttctgtggaaatggtttctatgagttgtactccaaactcattttgctgtggaaatggtttccataatcttcaatctcat 4835965  T
Q  183 tatcaacaccgtcgttcatc 202  Q
     |||||||||||||||||||    
T  4835966 catcaacaccgtcgttcatc 4835985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 89 - 202
Target Start/End: Original strand, 4841311 - 4841430
Alignment:
Q  89 accggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcat 182  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |       | ||||||||||||||| |||||||||||||||    
T  4841311 accggaatgccaaaaccatttttctgtggaaatggtttctatgagttgtactccaaactcattttgctgtggaaatggtttccataatcttcaatctcat 4841410  T
Q  183 tatcaacaccgtcgttcatc 202  Q
     |||||||||||||||||||    
T  4841411 catcaacaccgtcgttcatc 4841430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 89 - 194
Target Start/End: Complemental strand, 7059027 - 7058916
Alignment:
Q  89 accggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcat 182  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||       | ||||||||||||||||||||||| |||||||    
T  7059027 accggaatgtcaaaaccattttgctatggaaatggtttctgtgagttgtactccaaacccattttgctgtggaaatggtttccagaatcttctatctcat 7058928  T
Q  183 tatcaacaccgt 194  Q
     |||| ||||||    
T  7058927 catcatcaccgt 7058916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 93 - 202
Target Start/End: Original strand, 4835723 - 4835842
Alignment:
Q  93 gaatgccaaaaccattttgctgtggaaatggtttctg----tgagttgtactccaaacccgtat------ggaaatggtttccagaatcttcaatctcat 182  Q
    |||||||||||||||||| ||||||||||||||| ||    ||||||||||||||||||| | |      ||||||||||||||||||||||||||||||    
T  4835723 gaatgccaaaaccatttttctgtggaaatggtttatgcatgtgagttgtactccaaacccattttgttgtggaaatggtttccagaatcttcaatctcat 4835822  T
Q  183 tatcaacaccgtcgttcatc 202  Q
     |||||||||||||||||||    
T  4835823 catcaacaccgtcgttcatc 4835842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 93 - 202
Target Start/End: Original strand, 4841168 - 4841287
Alignment:
Q  93 gaatgccaaaaccattttgctgtggaaatggtttctg----tgagttgtactccaaacccgtat------ggaaatggtttccagaatcttcaatctcat 182  Q
    |||||||||||||||||| ||||||||||||||| ||    ||||||||||||||||||| | |      ||||||||||||||||||||||||||||||    
T  4841168 gaatgccaaaaccatttttctgtggaaatggtttatgcatgtgagttgtactccaaacccattttgttgtggaaatggtttccagaatcttcaatctcat 4841267  T
Q  183 tatcaacaccgtcgttcatc 202  Q
     |||||||||||||||||||    
T  4841268 catcaacaccgtcgttcatc 4841287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 17656722 - 17656672
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17656722 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 17656672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 152 - 202
Target Start/End: Complemental strand, 2750894 - 2750844
Alignment:
Q  152 tggaaatggtttccagaatcttcaatctcattatcaacaccgtcgttcatc 202  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  2750894 tggaaatggtttccagaatcttcaatctcatcatcaacaccgtcgttcatc 2750844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 10586001 - 10586051
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  10586001 atgccaaaaccattttgttgtggaaatggtttctgtgagttgtactccaaa 10586051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 23397280 - 23397230
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  23397280 atgccaaaaccattttgatgtggaaatggtttctgtgagttgtactccaaa 23397230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 27506846 - 27506896
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  27506846 atgccaaaaccattttgctgtggaaatagtttctgtgagttgtactccaaa 27506896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 40022595 - 40022645
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  40022595 atgccaaaatcattttgctgtggaaatggtttctgtgagttgtactccaaa 40022645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 40246592 - 40246642
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  40246592 atgccaaaaccattttgcagtggaaatggtttctgtgagttgtactccaaa 40246642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 100 - 145
Target Start/End: Complemental strand, 1672229 - 1672184
Alignment:
Q  100 aaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  1672229 aaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 1672184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 95 - 143
Target Start/End: Complemental strand, 35448338 - 35448290
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactcca 143  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  35448338 atgccaaaaccattttgctgtggaaatgatttctgtgagttgtactcca 35448290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 185982 - 185935
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||    
T  185982 ccaaaaccattttgttgtggaaatggtttctgtgagttgtactccaaa 185935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 13526224 - 13526271
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  13526224 ccaaaaccattttgctgtgaaaatggtttctgtgagttgtactccaaa 13526271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 13615759 - 13615806
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  13615759 ccaaaaccattttgctgtgaaaatggtttctgtgagttgtactccaaa 13615806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 1773229 - 1773279
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  1773229 atgccaaaatcattttgctgtggaaatggtttttgtgagttgtactccaaa 1773279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 152 - 202
Target Start/End: Complemental strand, 2750982 - 2750932
Alignment:
Q  152 tggaaatggtttccagaatcttcaatctcattatcaacaccgtcgttcatc 202  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  2750982 tggaaatggtttccagaatcttcaatctcatcatcaacaccgtagttcatc 2750932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 152 - 202
Target Start/End: Complemental strand, 2751070 - 2751020
Alignment:
Q  152 tggaaatggtttccagaatcttcaatctcattatcaacaccgtcgttcatc 202  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  2751070 tggaaatggtttccagaatcttcaatctcatcatcaacaccgtagttcatc 2751020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 6783537 - 6783487
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  6783537 atgccaaaaccattttgctgtgaaaatagtttctgtgagttgtactccaaa 6783487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 9853093 - 9853043
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  9853093 atgccaaaatcattttgctgtggaaatggtttttgtgagttgtactccaaa 9853043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 17792832 - 17792882
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  17792832 atgccaaaaccattttgctgtgtaaatgatttctgtgagttgtactccaaa 17792882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 18161393 - 18161343
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  18161393 atgccaaaaccattttactgtggaaatggtttctgtgatttgtactccaaa 18161343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 23504633 - 23504683
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  23504633 atgccaaaaccattttgctgtgaaaatggattctgtgagttgtactccaaa 23504683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 34343353 - 34343303
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  34343353 atgccaaaaccattttgctgtggaaatggtttttgtgagttgtacttcaaa 34343303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 35301836 - 35301886
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  35301836 atgctaaaaccattttgctgtggaaatggtttatgtgagttgtactccaaa 35301886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 95 - 144
Target Start/End: Original strand, 23940754 - 23940803
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaa 144  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  23940754 atgccaaaaccattttgctgtgaaaatggtttctatgagttgtactccaa 23940803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 9852893 - 9852846
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||    
T  9852893 ccaaaatcattttgctgtggaaatggtttctgtgtgttgtactccaaa 9852846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 18026983 - 18026936
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  18026983 ccaaaaccattttgctgtgaaaatggtttctgtgagttggactccaaa 18026936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 2523607 - 2523557
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||  ||||||||||||| ||||||||||||||||||    
T  2523607 atgccaaaaccattttggagtggaaatggtttatgtgagttgtactccaaa 2523557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 2541130 - 2541179
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  2541130 atgccaaaaccattttactgtggaaa-ggtttctgtgagttgtactccaaa 2541179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 12356188 - 12356138
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||| ||| ||||||||||||||||||| ||||||||    
T  12356188 atgccaaaaccattttgcagtgaaaatggtttctgtgagttggactccaaa 12356138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 13526182 - 13526228
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||    
T  13526182 caaaaccattttgcagtggaaatggtttctgtgagttggactccaaa 13526228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 13615717 - 13615763
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||    
T  13615717 caaaaccattttgcagtggaaatggtttctgtgagttggactccaaa 13615763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 32644191 - 32644237
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||    
T  32644191 caaaactattttgctgtggaaatgatttctgtgagttgtactccaaa 32644237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 34647378 - 34647428
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||| |||||||||||||||||||||| ||| ||||||||||||||    
T  34647378 atgccaaaatcattttgctgtggaaatggtttatgtaagttgtactccaaa 34647428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 39022810 - 39022768
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgtgagttgtactc 141  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  39022810 caaaactattttgctgtggaaatggtttctgtgagttgtactc 39022768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 140
Target Start/End: Original strand, 8439128 - 8439173
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtact 140  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||    
T  8439128 atgccaaaaccattttgctgtggaaatgatttatgtgagttgtact 8439173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 138
Target Start/End: Original strand, 5106679 - 5106718
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgtgagttgta 138  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  5106679 caaaaccattttgctgtggaaatggtttttgtgagttgta 5106718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 150
Target Start/End: Original strand, 15260078 - 15260133
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaacccgt 150  Q
    |||| ||||||||||||||||| ||||||||| ||||||||||| |||||| ||||    
T  15260078 atgctaaaaccattttgctgtgaaaatggtttatgtgagttgtaatccaaaaccgt 15260133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 23397105 - 23397058
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||||| ||||||||||| || |||||||||||||    
T  23397105 ccaaaaccattttgctgtgaaaatggtttctatgtgttgtactccaaa 23397058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 30652455 - 30652409
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||    
T  30652455 ccaaaaccattttgc-gtggaaatggtttctgtgtgttgtactccaaa 30652409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 34647557 - 34647604
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||||||||||||||||||||  || |||||||||    
T  34647557 ccaaaaccattttgctgtggaaatggtttctgtgtattatactccaaa 34647604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 40022774 - 40022821
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||||||||||| |||||||| |||||||| ||||    
T  40022774 ccaaaaccattttgctgtggaaatgatttctgtgtgttgtacttcaaa 40022821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 145
Target Start/End: Complemental strand, 42434406 - 42434363
Alignment:
Q  102 aaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||| |||||||||||||| ||||||||||||||||||    
T  42434406 aaccattttgttgtggaaatggtttatgtgagttgtactccaaa 42434363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 89 - 127
Target Start/End: Complemental strand, 2751096 - 2751058
Alignment:
Q  89 accggaatgccaaaaccattttgctgtggaaatggtttc 127  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  2751096 accggaatgctaaaaccattttgctgtggaaatggtttc 2751058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 24473189 - 24473235
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||| |||||||||||||  ||||||||||||||||||    
T  24473189 caaaaccattttgatgtggaaatggttgttgtgagttgtactccaaa 24473235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 30652413 - 30652368
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaa 144  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||    
T  30652413 ccaaaaccattttgatgtggaaatggtttctgtgag-tgtactccaa 30652368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 130
Target Start/End: Complemental strand, 15809741 - 15809709
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgt 130  Q
    |||||||||||||||||||||||||||||||||    
T  15809741 ccaaaaccattttgctgtggaaatggtttctgt 15809709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 120
Target Start/End: Complemental strand, 1209509 - 1209478
Alignment:
Q  89 accggaatgccaaaaccattttgctgtggaaa 120  Q
    ||||||||||||||||||||||||||||||||    
T  1209509 accggaatgccaaaaccattttgctgtggaaa 1209478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 126
Target Start/End: Complemental strand, 1672835 - 1672804
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggttt 126  Q
    ||||||||||||||||||||||||||||||||    
T  1672835 atgccaaaaccattttgctgtggaaatggttt 1672804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 202
Target Start/End: Original strand, 4835672 - 4835707
Alignment:
Q  167 gaatcttcaatctcattatcaacaccgtcgttcatc 202  Q
    |||||||||||||||| |||||||||||||||||||    
T  4835672 gaatcttcaatctcatcatcaacaccgtcgttcatc 4835707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 202
Target Start/End: Original strand, 4841117 - 4841152
Alignment:
Q  167 gaatcttcaatctcattatcaacaccgtcgttcatc 202  Q
    |||||||||||||||| |||||||||||||||||||    
T  4841117 gaatcttcaatctcatcatcaacaccgtcgttcatc 4841152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 12356142 - 12356095
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||| ||||||||| ||||||||||||  ||||||||    
T  12356142 ccaaaaccattttgcagtggaaatgatttctgtgagtttgactccaaa 12356095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 145
Target Start/End: Original strand, 28698089 - 28698132
Alignment:
Q  102 aaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||  ||||||||||||||||||||||| ||||||||    
T  28698089 aaccattttgtagtggaaatggtttctgtgagttggactccaaa 28698132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 28979405 - 28979449
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||  ||| ||||||||||||    
T  28979405 caaaaccattttgctgtggaaatggtttc--tgaattgtactccaaa 28979449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 127
Target Start/End: Complemental strand, 2750920 - 2750882
Alignment:
Q  89 accggaatgccaaaaccattttgctgtggaaatggtttc 127  Q
    |||||||||  ||||||||||||||||||||||||||||    
T  2750920 accggaatgaaaaaaccattttgctgtggaaatggtttc 2750882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 127
Target Start/End: Complemental strand, 2751008 - 2750970
Alignment:
Q  89 accggaatgccaaaaccattttgctgtggaaatggtttc 127  Q
    |||||||||  ||||||||||||||||||||||||||||    
T  2751008 accggaatgaaaaaaccattttgctgtggaaatggtttc 2750970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 7614656 - 7614606
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||| ||||| |||   ||||||||||||||||||||||    
T  7614656 atgccaaaaccattttactgtgaaaaatatttctgtgagttgtactccaaa 7614606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 2541045 - 2541073
Alignment:
Q  117 gaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||    
T  2541045 gaaatggtttctgtgagttgtactccaaa 2541073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Complemental strand, 9852917 - 9852889
Alignment:
Q  117 gaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||    
T  9852917 gaaatggtttctgtgagttgtactccaaa 9852889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Complemental strand, 17656816 - 17656788
Alignment:
Q  117 gaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||    
T  17656816 gaaatggtttctgtgagttgtactccaaa 17656788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 145
Target Start/End: Complemental strand, 30652491 - 30652451
Alignment:
Q  105 cattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||| ||||||||| ||||||||||||| ||||||||    
T  30652491 cattttgcagtggaaatgatttctgtgagttggactccaaa 30652451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 34647533 - 34647561
Alignment:
Q  117 gaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||    
T  34647533 gaaatggtttctgtgagttgtactccaaa 34647561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 35301991 - 35302019
Alignment:
Q  117 gaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||    
T  35301991 gaaatggtttctgtgagttgtactccaaa 35302019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Complemental strand, 39022659 - 39022631
Alignment:
Q  117 gaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||    
T  39022659 gaaatggtttctgtgagttgtactccaaa 39022631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 40022750 - 40022778
Alignment:
Q  117 gaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||    
T  40022750 gaaatggtttctgtgagttgtactccaaa 40022778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 2e-36; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 92 - 202
Target Start/End: Original strand, 24736775 - 24736891
Alignment:
Q  92 ggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcattat 185  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||       | ||||||||||||||||||||||||||||||| ||    
T  24736775 ggaatgccaaaaccattttgttgtggaaatggtttctgtgagttgtactccaaacccattttgctgtggaaatggtttccagaatcttcaatctcatcat 24736874  T
Q  186 caacaccgtcgttcatc 202  Q
    |||||||||||||||||    
T  24736875 caacaccgtcgttcatc 24736891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 89 - 202
Target Start/End: Complemental strand, 878094 - 877975
Alignment:
Q  89 accggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcat 182  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||       | |||||||||||||||||||||||||| ||||    
T  878094 accggaatgccaaaaccattttgttgtggaaatggtttttgtgagttgtactccaaacccattttgctgtggaaatggtttccagaatcttcaatttcat 877995  T
Q  183 tatcaacaccgtcgttcatc 202  Q
     |||||||||||||||||||    
T  877994 catcaacaccgtcgttcatc 877975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 89 - 202
Target Start/End: Complemental strand, 878237 - 878118
Alignment:
Q  89 accggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcat 182  Q
    ||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||       | |||||||||||||||||||||||||||||||    
T  878237 accggaatgtcaaaaccattttgttgtgaaaatggtttctgtgagttgtactccaaacccattttgctgtggaaatggtttccagaatcttcaatctcat 878138  T
Q  183 tatcaacaccgtcgttcatc 202  Q
     |||||||||||||||||||    
T  878137 catcaacaccgtcgttcatc 878118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 89 - 202
Target Start/End: Original strand, 33345532 - 33345651
Alignment:
Q  89 accggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcat 182  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||       | ||||||||||||||| |||||||||||||||    
T  33345532 accggaatgccaaaaccatttatctgtggaaatggtttctgtgagttgtactccaaacccattttgctgtggaaatggtttccataatcttcaatctcat 33345631  T
Q  183 tatcaacaccgtcgttcatc 202  Q
     |||||||||||||||||||    
T  33345632 catcaacaccgtcgttcatc 33345651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 16967558 - 16967605
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  16967558 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 16967605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 7765241 - 7765191
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  7765241 atgccaaaaccattttgttgtggaaatggtttctgtgagttgtactccaaa 7765191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 18611997 - 18611951
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  18611997 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 18611951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 22857617 - 22857667
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  22857617 atgccaaaaccattttactgtggaaatggtttctgtgagttgtactccaaa 22857667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 10588896 - 10588943
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  10588896 ccaaaaccattttgctgtggaaatagtttctgtgagttgtactccaaa 10588943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 10698717 - 10698768
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagtt-gtactccaaa 145  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  10698717 atgccaaaaccattttgctgtggaaatggtttctgtgagttagtactccaaa 10698768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 15008248 - 15008295
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  15008248 ccaaaaccattttgctgtggaaatggtttatgtgagttgtactccaaa 15008295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 29157828 - 29157781
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  29157828 ccaaaactattttgctgtggaaatggtttctgtgagttgtactccaaa 29157781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 19281424 - 19281474
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  19281424 atgccaaaaccattttgctgtgaaaatagtttctgtgagttgtactccaaa 19281474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 25119410 - 25119460
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  25119410 atgccaaaaccattttgctgtgtaaatggtttctgtcagttgtactccaaa 25119460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 30387140 - 30387190
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  30387140 atgccaaaatcattttgctgtagaaatggtttctgtgagttgtactccaaa 30387190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 100 - 145
Target Start/End: Original strand, 15008074 - 15008119
Alignment:
Q  100 aaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||||||| |||||||||||    
T  15008074 aaaaccattttgctgtggaaatggtttctgtgagctgtactccaaa 15008119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 4102620 - 4102667
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  4102620 ccaaaaccattttgctgtggaaatggtttatgtgagttgtacttcaaa 4102667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 4338215 - 4338262
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  4338215 ccaaaaccattttgctgtggaaatgatttctatgagttgtactccaaa 4338262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 22031737 - 22031784
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  22031737 ccaaaaccattttgctgtgaaaatggtttctgtgagttggactccaaa 22031784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 30909248 - 30909201
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||    
T  30909248 ccaaaaccattttgctatggaaatggtttctgtgtgttgtactccaaa 30909201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 4338126 - 4338176
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||| ||||||||||||| ||||||||| ||||||||    
T  4338126 atgccaaaaccattttgcagtggaaatggtttttgtgagttggactccaaa 4338176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 7371038 - 7371088
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||| |||||||| | |||||||||||||||||||||||||||||    
T  7371038 atgccaaaactattttgctttagaaatggtttctgtgagttgtactccaaa 7371088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 145
Target Start/End: Complemental strand, 18611813 - 18611775
Alignment:
Q  107 ttttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||||||||||||    
T  18611813 ttttgctgtggaaatggtttctgtgagttgtactccaaa 18611775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 21384933 - 21384979
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||    
T  21384933 caaaaccattttgctatgaaaatggtttctgtgagttgtactccaaa 21384979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 26713114 - 26713164
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||| ||||||||||||||||| ||| |||||||||||    
T  26713114 atgccaaaaccattttgatgtggaaatggtttctgggagctgtactccaaa 26713164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 27079726 - 27079776
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||| |||||||||||| |||||||||| ||||||||||||||||||||||    
T  27079726 atgcaaaaaccattttgttgtggaaatgatttctgtgagttgtactccaaa 27079776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 4338172 - 4338219
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||| ||||||||||||||||| ||||| ||||||||    
T  4338172 ccaaaaccattttgcagtggaaatggtttctgttagttggactccaaa 4338219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 28129416 - 28129369
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||| |||||||||||||||||  |||||||||||||||||    
T  28129416 ccaaaaccattgtgctgtggaaatggttttggtgagttgtactccaaa 28129369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 11140396 - 11140446
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||| |||||||||||| |||||||||  ||||||||||||||||||||||    
T  11140396 atgcaaaaaccattttgttgtggaaataatttctgtgagttgtactccaaa 11140446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 29163362 - 29163316
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||| ||| ||||| ||||||||||||    
T  29163362 caaaaccattttgctgtggaaatgatttatgtgaattgtactccaaa 29163316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 145
Target Start/End: Original strand, 4102445 - 4102490
Alignment:
Q  100 aaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||| |||||||||||||||||||  |||||||||||    
T  4102445 aaaaccattttgcagtggaaatggtttctgtgaactgtactccaaa 4102490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 145
Target Start/End: Complemental strand, 30909418 - 30909377
Alignment:
Q  104 ccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||  |||||||||||||||||||||||||||||||    
T  30909418 ccattttgccttggaaatggtttctgtgagttgtactccaaa 30909377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 4102664 - 4102695
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgt 130  Q
    ||||||||||||||||||||||||||||||||    
T  4102664 caaaaccattttgctgtggaaatggtttctgt 4102695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 14237923 - 14237969
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||| ||||||||||||||||| ||||||| | ||||||||||||    
T  14237923 caaaactattttgctgtggaaatgatttctgtcacttgtactccaaa 14237969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 18612218 - 18612184
Alignment:
Q  168 aatcttcaatctcattatcaacaccgtcgttcatc 202  Q
    ||||||||||||||| |||||||||||||||||||    
T  18612218 aatcttcaatctcatcatcaacaccgtcgttcatc 18612184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 20522788 - 20522838
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||| |||||| |  ||||||||||||| ||||||||||||||||    
T  20522788 atgccaaaacaattttgtttcggaaatggtttctatgagttgtactccaaa 20522838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 202
Target Start/End: Original strand, 33345487 - 33345520
Alignment:
Q  169 atcttcaatctcattatcaacaccgtcgttcatc 202  Q
    ||||||||||||||||||||||| ||||||||||    
T  33345487 atcttcaatctcattatcaacactgtcgttcatc 33345520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Complemental strand, 18611846 - 18611818
Alignment:
Q  117 gaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||    
T  18611846 gaaatggtttctgtgagttgtactccaaa 18611818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 202
Target Start/End: Original strand, 24736712 - 24736748
Alignment:
Q  166 agaatcttcaatctcattatcaacaccgtcgttcatc 202  Q
    ||||||||||||||||| |||||||| ||||||||||    
T  24736712 agaatcttcaatctcatcatcaacactgtcgttcatc 24736748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 25119152 - 25119180
Alignment:
Q  117 gaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||    
T  25119152 gaaatggtttctgtgagttgtactccaaa 25119180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 7e-36; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 89 - 202
Target Start/End: Original strand, 18297377 - 18297496
Alignment:
Q  89 accggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcat 182  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||       | |||||||||||||||||||||||||||||||    
T  18297377 accggaatgtcaaaaccattttgctgtggaaatggtttttgtgagttgtactccaaacccattttgttgtggaaatggtttccagaatcttcaatctcat 18297476  T
Q  183 tatcaacaccgtcgttcatc 202  Q
     |||||||||||||||||||    
T  18297477 catcaacaccgtcgttcatc 18297496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 89 - 202
Target Start/End: Original strand, 4578891 - 4579009
Alignment:
Q  89 accggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcat 182  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||       | |||||||||||||||||||||||||||||||    
T  4578891 accggaatgccaaaaccattttgctgtgg-aatggtttttgtgagttgtactccaaacccattttgttgtggaaatggtttccagaatcttcaatctcat 4578989  T
Q  183 tatcaacaccgtcgttcatc 202  Q
     |||||||||||||||||||    
T  4578990 catcaacaccgtcgttcatc 4579009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 93 - 202
Target Start/End: Complemental strand, 25193698 - 25193583
Alignment:
Q  93 gaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcattatc 186  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||||||||||       | || |||||||||||||||||||||||||||| |||    
T  25193698 gaatgccaaaaccattttgctttgaaaatggtttctgtgagttgtactccaaacccattttgctgtgtaaatggtttccagaatcttcaatctcatcatc 25193599  T
Q  187 aacaccgtcgttcatc 202  Q
    ||||||||||||||||    
T  25193598 aacaccgtcgttcatc 25193583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 93 - 202
Target Start/End: Complemental strand, 25193829 - 25193714
Alignment:
Q  93 gaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcattatc 186  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||||||||||       | || |||||||||||||||||||||||||||| |||    
T  25193829 gaatgccaaaaccattttgctttgaaaatggtttctgtgagttgtactccaaacccattttgctgtgtaaatggtttccagaatcttcaatctcatcatc 25193730  T
Q  187 aacaccgtcgttcatc 202  Q
    ||||||||||||||||    
T  25193729 aacaccgtcgttcatc 25193714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 91 - 202
Target Start/End: Original strand, 14550626 - 14550743
Alignment:
Q  91 cggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcatta 184  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||       | ||||||||||||||||||| ||||||||||| |    
T  14550626 cggaatgccaaaaccattttgctgtggaaatgatttatgtgagttgtactccaaacccattttgctgtggaaatggtttccagaattttcaatctcatca 14550725  T
Q  185 tcaacaccgtcgttcatc 202  Q
    ||||||||||| ||||||    
T  14550726 tcaacaccgtcattcatc 14550743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 89 - 202
Target Start/End: Complemental strand, 2264496 - 2264377
Alignment:
Q  89 accggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcat 182  Q
    ||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||| |       | ||||||||||||||| |||||||||||||||    
T  2264496 accggaatgccaaaaccattttgttgtggaaatgatttttgtgagttgtactccaaactcattttgctgtggaaatggtttccataatcttcaatctcat 2264397  T
Q  183 tatcaacaccgtcgttcatc 202  Q
     |||||||| ||||||||||    
T  2264396 catcaacactgtcgttcatc 2264377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 93 - 190
Target Start/End: Complemental strand, 2264361 - 2264258
Alignment:
Q  93 gaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaacc------cgtatggaaatggtttccagaatcttcaatctcattatc 186  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||        | ||||||||||||| ||||||||||||||||| |||    
T  2264361 gaatgccaaaaccattttgctgtagaaatggtttctgtgagttgtactccaaaccaattttgttgtggaaatggtttctagaatcttcaatctcatcatc 2264262  T
Q  187 aaca 190  Q
    ||||    
T  2264261 aaca 2264258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 93 - 202
Target Start/End: Original strand, 4578765 - 4578879
Alignment:
Q  93 gaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcattatc 186  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||       | |||||||| ||| |||||| ||||||||||| |||    
T  4578765 gaatgccaaaaccattttgctgtgg-aatggtttttgtgagttgtactccaaacccattttgctgtggaaatgattttcagaattttcaatctcatcatc 4578863  T
Q  187 aacaccgtcgttcatc 202  Q
    ||||||||||||||||    
T  4578864 aacaccgtcgttcatc 4578879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 89 - 202
Target Start/End: Original strand, 4579021 - 4579137
Alignment:
Q  89 accggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaacccgtat------ggaaatggtttccagaatcttcaatctcat 182  Q
    ||||||||||||||||||||||||||||||| |||||| ||  ||||||||||||||||| | |      ||||||||||||||||| ||||||||||||    
T  4579021 accggaatgccaaaaccattttgctgtggaa-tggtttttg--agttgtactccaaacccattttgctgtggaaatggtttccagaagcttcaatctcat 4579117  T
Q  183 tatcaacaccgtcgttcatc 202  Q
     |||||||||||| ||||||    
T  4579118 catcaacaccgtcattcatc 4579137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 19246766 - 19246716
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19246766 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 19246716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 31711614 - 31711564
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31711614 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 31711564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 1095308 - 1095358
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  1095308 atgctaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 1095358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 20661535 - 20661585
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  20661535 atgccaaaaccattttgctgtggaaatggcttctgtgagttgtactccaaa 20661585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 20710603 - 20710557
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  20710603 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 20710557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 31783897 - 31783847
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  31783897 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtacttcaaa 31783847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 42364596 - 42364546
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  42364596 atgccaaaaccattttgctgtgaaaatggtttctgtgagttgtactccaaa 42364546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 4281220 - 4281267
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  4281220 ccaaaaccattttgctgtggaaattgtttctgtgagttgtactccaaa 4281267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 98 - 141
Target Start/End: Complemental strand, 39548484 - 39548441
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactc 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  39548484 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactc 39548441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 16111617 - 16111567
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  16111617 atgccaaaaccattttactgtgaaaatggtttctgtgagttgtactccaaa 16111567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 30777466 - 30777516
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  30777466 atgccaaaattattttgctgtggaaatggtttctgtgagttgtactccaaa 30777516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 36636150 - 36636200
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  36636150 atgccaaaatcattttgctgtggaaatggtttttgtgagttgtactccaaa 36636200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 37867254 - 37867208
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||    
T  37867254 caaaactattttgctgtggaaatggtttctgtgagttgtactccaaa 37867208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 41345294 - 41345344
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  41345294 atgccaaaaccgttttgctgtggaaatggtttatgtgagttgtactccaaa 41345344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 43823520 - 43823470
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  43823520 atgccaaaatcattttgctgtggaaatggtttatgtgagttgtactccaaa 43823470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 138
Target Start/End: Original strand, 13081317 - 13081357
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgta 138  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  13081317 ccaaaaccattttgctgtggaaatggtttctgtgagttgta 13081357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 145
Target Start/End: Original strand, 34726746 - 34726786
Alignment:
Q  105 cattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  34726746 cattttgctgtggaaatggtttctgtgagttgtactccaaa 34726786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 3928265 - 3928218
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  3928265 ccaaaaccattttgctgtgaaaatggtttctgtgagttggactccaaa 3928218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 28056012 - 28056059
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||    
T  28056012 ccaaaaccattttgctgtgaaaatggtttctgtgagttatactccaaa 28056059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 44341888 - 44341935
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  44341888 ccaaaaccattttgctgtgaaaatggtttctgtgagttggactccaaa 44341935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 3147230 - 3147276
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||    
T  3147230 caaaacaattttgctgtggaaatggtttatgtgagttgtactccaaa 3147276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 4281044 - 4281090
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||    
T  4281044 caaaaccattttgttgtggaaatggtttctgtgagttatactccaaa 4281090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 12449187 - 12449233
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||    
T  12449187 caaaaccattttgctgtgaaaatggtttctttgagttgtactccaaa 12449233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 22588458 - 22588508
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||| ||||||| |||||||||| ||||||||||||||||||||||    
T  22588458 atgccaaaaacattttgttgtggaaatgatttctgtgagttgtactccaaa 22588508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 35126633 - 35126683
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||| |||||| ||||||||||| ||||||||||||||||||||||    
T  35126633 atgccaaaatcattttactgtggaaatgatttctgtgagttgtactccaaa 35126683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 41345474 - 41345520
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||||    
T  41345474 caaaaccattttgatgtggaaatggtttctgtgtgttgtactccaaa 41345520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 44915435 - 44915481
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||    
T  44915435 caaaaccattttgctgtgaaaatggtttctgtgaattgtactccaaa 44915481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 145
Target Start/End: Original strand, 13081278 - 13081321
Alignment:
Q  102 aaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||    
T  13081278 aaccattttgcagtggaaatggtttctgtgagttggactccaaa 13081321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 28049202 - 28049155
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||| |||||||||||||||||  |||||||||||||||||    
T  28049202 ccaaaaccattgtgctgtggaaatggttttggtgagttgtactccaaa 28049155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 36636329 - 36636376
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||||||||||| ||| ||||||||||||| ||||    
T  36636329 ccaaaaccattttgctgtggaaatgatttatgtgagttgtacttcaaa 36636376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 145
Target Start/End: Complemental strand, 39548523 - 39548480
Alignment:
Q  102 aaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||    
T  39548523 aaccattttgcagtggaaatggtttatgtgagttgtactccaaa 39548480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 43823340 - 43823293
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||| |||||||||| ||| ||||||||||||||||||    
T  43823340 ccaaaaccattttgttgtggaaatgatttatgtgagttgtactccaaa 43823293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 20193971 - 20194017
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||| ||||| ||||| ||||||||||||||||||||||    
T  20193971 caaaaccattttactgtgaaaatgatttctgtgagttgtactccaaa 20194017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 22596444 - 22596494
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||  ||||||||| ||||||||||||||||| |||||    
T  22596444 atgccaaaaccattttattgtggaaatagtttctgtgagttgtacaccaaa 22596494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 24183541 - 24183587
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||| ||||||| |||||||||||||| ||||||||||||||||||    
T  24183541 caaaatcattttgttgtggaaatggtttatgtgagttgtactccaaa 24183587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 202
Target Start/End: Original strand, 4578713 - 4578749
Alignment:
Q  166 agaatcttcaatctcattatcaacaccgtcgttcatc 202  Q
    ||||||||||||||||| |||||||||||||||||||    
T  4578713 agaatcttcaatctcatcatcaacaccgtcgttcatc 4578749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 120
Target Start/End: Complemental strand, 2264234 - 2264203
Alignment:
Q  89 accggaatgccaaaaccattttgctgtggaaa 120  Q
    ||||||||||||||||||||||||||||||||    
T  2264234 accggaatgccaaaaccattttgctgtggaaa 2264203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 202
Target Start/End: Complemental strand, 2264543 - 2264508
Alignment:
Q  167 gaatcttcaatctcattatcaacaccgtcgttcatc 202  Q
    |||||||||||||||| |||||||||||||||||||    
T  2264543 gaatcttcaatctcatcatcaacaccgtcgttcatc 2264508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 202
Target Start/End: Original strand, 4280870 - 4280905
Alignment:
Q  167 gaatcttcaatctcattatcaacaccgtcgttcatc 202  Q
    |||||||||||||||| |||||||||||||||||||    
T  4280870 gaatcttcaatctcatcatcaacaccgtcgttcatc 4280905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 141
Target Start/End: Original strand, 16141414 - 16141457
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactc 141  Q
    |||||| ||||||| |||||||||| ||||||||||||||||||    
T  16141414 ccaaaatcattttgttgtggaaatgatttctgtgagttgtactc 16141457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 202
Target Start/End: Complemental strand, 25995945 - 25995910
Alignment:
Q  167 gaatcttcaatctcattatcaacaccgtcgttcatc 202  Q
    |||||||||||||||| |||||||||||||||||||    
T  25995945 gaatcttcaatctcatcatcaacaccgtcgttcatc 25995910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 202
Target Start/End: Complemental strand, 43823740 - 43823705
Alignment:
Q  167 gaatcttcaatctcattatcaacaccgtcgttcatc 202  Q
    |||||||||||||||| |||||||||||||||||||    
T  43823740 gaatcttcaatctcatcatcaacaccgtcgttcatc 43823705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 20570864 - 20570818
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||| |||||||||||||| |||||||| ||||||||||| ||||    
T  20570864 caaaactattttgctgtggaattggtttctatgagttgtactgcaaa 20570818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 145
Target Start/End: Original strand, 16141459 - 16141504
Alignment:
Q  100 aaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||| |||||| ||||||||||| ||| ||||||||||||||||||    
T  16141459 aaaatcatttttctgtggaaatgatttatgtgagttgtactccaaa 16141504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 139
Target Start/End: Original strand, 21156529 - 21156570
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtac 139  Q
    ||||||||||||| ||||||||||||||||| || |||||||    
T  21156529 ccaaaaccatttttctgtggaaatggtttctatgtgttgtac 21156570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 145
Target Start/End: Original strand, 16141378 - 16141418
Alignment:
Q  105 cattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  16141378 cattttgcactggaaatggtttctgtgagttggactccaaa 16141418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Complemental strand, 20710452 - 20710424
Alignment:
Q  117 gaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||    
T  20710452 gaaatggtttctgtgagttgtactccaaa 20710424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 7e-36; HSPs: 93)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 89 - 202
Target Start/End: Original strand, 23174604 - 23174723
Alignment:
Q  89 accggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcat 182  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||       | |||||||||||||||||||||||||||||||    
T  23174604 accggaatgccaaaaccattttgttgtggaaatggtttctgtgagttgtactccaaacccattttgctgtggaaatggtttccagaatcttcaatctcat 23174703  T
Q  183 tatcaacaccgtcgttcatc 202  Q
     |||||||| ||||||||||    
T  23174704 catcaacactgtcgttcatc 23174723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 91 - 202
Target Start/End: Original strand, 23174737 - 23174854
Alignment:
Q  91 cggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcatta 184  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||       | ||||||||||||||||||||||||||||||| |    
T  23174737 cggaatgccaaaaccattttgttgtggaaatggtttctgtgagttgtactccaaacccattttgttgtggaaatggtttccagaatcttcaatctcatca 23174836  T
Q  185 tcaacaccgtcgttcatc 202  Q
    |||||| |||||||||||    
T  23174837 tcaacatcgtcgttcatc 23174854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 89 - 202
Target Start/End: Complemental strand, 180557 - 180438
Alignment:
Q  89 accggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcat 182  Q
    |||||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||       | |||||||||||||||||||||||||||||||    
T  180557 accggaatgccaaaaccatttttctgtggaaattgtttctatgagttgtactccaaacccattttactgtggaaatggtttccagaatcttcaatctcat 180458  T
Q  183 tatcaacaccgtcgttcatc 202  Q
     |||||||||||||||||||    
T  180457 catcaacaccgtcgttcatc 180438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 89 - 202
Target Start/End: Complemental strand, 180697 - 180578
Alignment:
Q  89 accggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaacccgtat------ggaaatggtttccagaatcttcaatctcat 182  Q
    |||||||||||||||||| ||| ||||  ||||||||||||||||||||||||||||||| | |      ||||||||||||||||||||||||||||||    
T  180697 accggaatgccaaaaccagttttctgtaaaaatggtttctgtgagttgtactccaaacccattttgctgtggaaatggtttccagaatcttcaatctcat 180598  T
Q  183 tatcaacaccgtcgttcatc 202  Q
     |||||||||||||||||||    
T  180597 catcaacaccgtcgttcatc 180578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 92 - 145
Target Start/End: Original strand, 23921142 - 23921195
Alignment:
Q  92 ggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23921142 ggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 23921195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 89 - 202
Target Start/End: Complemental strand, 11422422 - 11422303
Alignment:
Q  89 accggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcat 182  Q
    |||| |||||||||| ||||||| ||||||| |||||| |||||||||||||||||||||       | |||||||||||| ||||||||||||||||||    
T  11422422 accgaaatgccaaaatcattttgatgtggaagtggtttgtgtgagttgtactccaaacccattttgctgtggaaatggttttcagaatcttcaatctcat 11422323  T
Q  183 tatcaacaccgtcgttcatc 202  Q
     || |||| |||||||||||    
T  11422322 cattaacatcgtcgttcatc 11422303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 21256047 - 21256097
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21256047 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 21256097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 28322610 - 28322657
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  28322610 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 28322657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 11354451 - 11354501
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  11354451 atgctaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 11354501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 18057633 - 18057583
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  18057633 atgctaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 18057583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 18928882 - 18928832
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  18928882 atgccaaaaccattttgttgtggaaatggtttctgtgagttgtactccaaa 18928832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 23319235 - 23319285
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  23319235 atgccaaaaccattttgttgtggaaatggtttctgtgagttgtactccaaa 23319285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 31084239 - 31084189
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  31084239 atgccaaaaccattttgctgtggaaatggtttatgtgagttgtactccaaa 31084189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 32595208 - 32595158
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  32595208 atgccaaaaccattttgccgtggaaatggtttctgtgagttgtactccaaa 32595158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 33157095 - 33157045
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  33157095 atgccaaaaccattttcctgtggaaatggtttctgtgagttgtactccaaa 33157045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 37642950 - 37642904
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  37642950 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 37642904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 45890441 - 45890391
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  45890441 atgccaaaaccattttgctgtggaaatggtttatgtgagttgtactccaaa 45890391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 47693806 - 47693856
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  47693806 atgccaaaaccattttgctgtggaaatggtttgtgtgagttgtactccaaa 47693856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 2741566 - 2741519
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  2741566 ccaaacccattttgctgtggaaatggtttctgtgagttgtactccaaa 2741519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 30788837 - 30788790
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  30788837 ccaaaaccattttgctgtgaaaatggtttctgtgagttgtactccaaa 30788790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 31084059 - 31084012
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||    
T  31084059 ccaaaaccattttgctgtggaaatggtttctgtgtgttgtactccaaa 31084012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 35197599 - 35197646
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  35197599 ccaaaaccattttgctgtggaaatggtttttgtgagttgtactccaaa 35197646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 1395268 - 1395218
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  1395268 atgccaaaatcattttgctgtggaaatagtttctgtgagttgtactccaaa 1395218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 12070550 - 12070600
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  12070550 atgctaaaatcattttgctgtggaaatggtttctgtgagttgtactccaaa 12070600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 14229301 - 14229351
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  14229301 atgccaaaatcattttgatgtggaaatggtttctgtgagttgtactccaaa 14229351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 17811187 - 17811137
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  17811187 atgccaaaaccattttgctgtgaaaatggtttttgtgagttgtactccaaa 17811137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 18952526 - 18952576
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  18952526 atgccaaaatcattttactgtggaaatggtttctgtgagttgtactccaaa 18952576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 19216661 - 19216611
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  19216661 atgccaaaaccattttgcagtggaaatggtttctgtgagttggactccaaa 19216611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 20506516 - 20506566
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  20506516 atgcaaaaaccattttgctgtggaaatggtttatgtgagttgtactccaaa 20506566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 28322564 - 28322614
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  28322564 atgccaaaaccattttgcagtggaaatggtttctgtgagttggactccaaa 28322614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 29945321 - 29945271
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  29945321 atgccaaaaccattttgctgtaaaaatggtttctgtgagttgtactccaaa 29945271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 31763879 - 31763829
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  31763879 atgccaaaaccattttactgtggaaatggtttttgtgagttgtactccaaa 31763829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 35197420 - 35197470
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  35197420 atgccaaaaccatcttgttgtggaaatggtttctgtgagttgtactccaaa 35197470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 44261182 - 44261132
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  44261182 atgccaaaaccattttgcagtggaaatggtttctgtgagttggactccaaa 44261132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 143
Target Start/End: Complemental strand, 30803027 - 30802979
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactcca 143  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  30803027 atgccaaaatcattttgctgtggaaatggtttatgtgagttgtactcca 30802979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 16116526 - 16116479
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||    
T  16116526 ccaaaatcattttgttgtggaaatggtttctgtgagttgtactccaaa 16116479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 19216615 - 19216568
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||    
T  19216615 ccaaaaccattttgctgtggaaattgcttctgtgagttgtactccaaa 19216568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 23921323 - 23921370
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  23921323 ccaaaaccattttgctgtggaaatggtttttgtgagttgtacttcaaa 23921370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 31528998 - 31529045
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  31528998 ccaaaaccatttttctgtggaaatggtttatgtgagttgtactccaaa 31529045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 33097869 - 33097822
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||    
T  33097869 ccaaaatcattttgctgtggaaatggtttctgtgagttggactccaaa 33097822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 51420915 - 51420868
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||    
T  51420915 ccaaaatcattttgctgtggaaatggtttctgtgagttgcactccaaa 51420868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 51801051 - 51801098
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||    
T  51801051 ccaaaaccattttgctgtggaaatggcttttgtgagttgtactccaaa 51801098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 2741605 - 2741559
Alignment:
Q  102 aaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc 148  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||    
T  2741605 aaccattttgtagtggaaatggtttctgtgagttgtactccaaaccc 2741559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 152 - 202
Target Start/End: Original strand, 4097235 - 4097285
Alignment:
Q  152 tggaaatggtttccagaatcttcaatctcattatcaacaccgtcgttcatc 202  Q
    ||||||||||||||||||||||||||||||| ||||||| | |||||||||    
T  4097235 tggaaatggtttccagaatcttcaatctcatcatcaacatcatcgttcatc 4097285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 103 - 145
Target Start/End: Original strand, 9628547 - 9628589
Alignment:
Q  103 accattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  9628547 accattttactgtggaaatggtttctgtgagttgtactccaaa 9628589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 14389948 - 14389898
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||||  ||||||||||||||||||||| |||||||||    
T  14389948 atgccaaaaccattttgccttggaaatggtttctgtgagttatactccaaa 14389898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 16116705 - 16116655
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||| |||||||||||| |||| ||||||||||||||||||||||||||||    
T  16116705 atgcaaaaaccattttgatgtgaaaatggtttctgtgagttgtactccaaa 16116655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 17893213 - 17893263
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||| ||||||||| |||| ||||||||||||||||||    
T  17893213 atgccaaaaccattttgttgtggaaatagtttttgtgagttgtactccaaa 17893263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 35754673 - 35754623
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||| ||||||||||||||||||||||| ||||||| ||||||||||||||    
T  35754673 atgcaaaaaccattttgctgtggaaatgatttctgtaagttgtactccaaa 35754623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 44687778 - 44687828
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||| ||||||||||||| ||||||||| ||||||||    
T  44687778 atgccaaaaccattttgcagtggaaatggtttttgtgagttggactccaaa 44687828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 45849253 - 45849299
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||    
T  45849253 caaaaccattttgctgtggaaatggtttttgttagttgtactccaaa 45849299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 19850708 - 19850661
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||| |||||||||||||||||  |||||||||||||||||    
T  19850708 ccaaaaccattgtgctgtggaaatggttttggtgagttgtactccaaa 19850661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 145
Target Start/End: Original strand, 31528959 - 31529002
Alignment:
Q  102 aaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||    
T  31528959 aaccattttgcagtggaaatggtttctgtgagttggactccaaa 31529002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 44261136 - 44261089
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||| |||||||||||||||||||| | ||||||||||    
T  44261136 ccaaaaccattttgttgtggaaatggtttctgtgactcgtactccaaa 44261089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 44687867 - 44687914
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||| |||||||||||||| ||||||||||||| ||||    
T  44687867 ccaaaaccattttgttgtggaaatggtttatgtgagttgtacttcaaa 44687914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 51420958 - 51420911
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||| ||||||||||||||||||||||  ||||||||    
T  51420958 ccaaaaccattttgcagtggaaatggtttctgtgagtttgactccaaa 51420911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 145
Target Start/End: Original strand, 51801012 - 51801055
Alignment:
Q  102 aaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||    
T  51801012 aaccattttgcagtggaaatggtttctgtgagttggactccaaa 51801055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 6708417 - 6708371
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||| ||||| ||||| ||||||||||||||||||||||    
T  6708417 caaaaccattttactgtgaaaatgatttctgtgagttgtactccaaa 6708371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 9040995 - 9041041
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||| ||||||||||||||||| ||| ||||||||||||    
T  9040995 caaaaccattttactgtggaaatggtttctatgaattgtactccaaa 9041041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 10498086 - 10498040
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||||||||||| |||  ||||||||||||||||    
T  10498086 caaaaccattttgctgtggaaatggcttcaatgagttgtactccaaa 10498040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 12796533 - 12796483
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||| ||||  |||| |||||||||||||||||||||||    
T  12796533 atgccaaaaccattttcctgtaaaaatagtttctgtgagttgtactccaaa 12796483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 32143712 - 32143758
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||| ||||||||||| ||||||||| ||||||||||||    
T  32143712 caaaaccattttactgtggaaatgatttctgtgaattgtactccaaa 32143758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 51904826 - 51904872
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||| ||||||||||| ||||||||| ||||||||||||    
T  51904826 caaaaccattttactgtggaaatgatttctgtgaattgtactccaaa 51904872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 10497911 - 10497866
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||||||||||| |||||||  |||||||||||||    
T  10497911 ccaaaaccattttgctgtggaaatgatttctgt--gttgtactccaaa 10497866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 120
Target Start/End: Complemental strand, 180429 - 180398
Alignment:
Q  89 accggaatgccaaaaccattttgctgtggaaa 120  Q
    ||||||||||||||||||||||||||||||||    
T  180429 accggaatgccaaaaccattttgctgtggaaa 180398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 201
Target Start/End: Complemental strand, 180745 - 180710
Alignment:
Q  166 agaatcttcaatctcattatcaacaccgtcgttcat 201  Q
    ||||||||||||||||| ||||||||||||||||||    
T  180745 agaatcttcaatctcatcatcaacaccgtcgttcat 180710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 202
Target Start/End: Original strand, 8401562 - 8401597
Alignment:
Q  167 gaatcttcaatctcattatcaacaccgtcgttcatc 202  Q
    |||||||||||||||| |||||||||||||||||||    
T  8401562 gaatcttcaatctcatcatcaacaccgtcgttcatc 8401597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 120
Target Start/End: Original strand, 8401609 - 8401640
Alignment:
Q  89 accggaatgccaaaaccattttgctgtggaaa 120  Q
    ||||||||||||||||||||||||||||||||    
T  8401609 accggaatgccaaaaccattttgctgtggaaa 8401640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 16116483 - 16116436
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||| |||| |||||||||||| |||||||| |||||||||    
T  16116483 ccaaaaccattatgctttggaaatggtttatgtgagttctactccaaa 16116436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 141
Target Start/End: Original strand, 20506694 - 20506737
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactc 141  Q
    |||||||||||||| |||||||||||||| |||| |||||||||    
T  20506694 ccaaaaccattttgttgtggaaatggtttatgtgtgttgtactc 20506737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 141
Target Start/End: Original strand, 23277352 - 23277395
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactc 141  Q
    |||||||||||||| |||||||| |||||||||| |||||||||    
T  23277352 ccaaaaccattttgttgtggaaacggtttctgtgtgttgtactc 23277395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 202
Target Start/End: Original strand, 23921092 - 23921127
Alignment:
Q  167 gaatcttcaatctcattatcaacaccgtcgttcatc 202  Q
    |||||||||||||||| |||||||||||||||||||    
T  23921092 gaatcttcaatctcatcatcaacaccgtcgttcatc 23921127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 120
Target Start/End: Complemental strand, 34370377 - 34370346
Alignment:
Q  89 accggaatgccaaaaccattttgctgtggaaa 120  Q
    ||||||||||||||||||||||||||||||||    
T  34370377 accggaatgccaaaaccattttgctgtggaaa 34370346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 202
Target Start/End: Complemental strand, 34370427 - 34370392
Alignment:
Q  167 gaatcttcaatctcattatcaacaccgtcgttcatc 202  Q
    |||||||||||||||| |||||||||||||||||||    
T  34370427 gaatcttcaatctcatcatcaacaccgtcgttcatc 34370392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 202
Target Start/End: Original strand, 35197202 - 35197237
Alignment:
Q  167 gaatcttcaatctcattatcaacaccgtcgttcatc 202  Q
    |||||||||||||||| |||||||||||||||||||    
T  35197202 gaatcttcaatctcatcatcaacaccgtcgttcatc 35197237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 44687824 - 44687871
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||| |||||||  |||||||||||||||||||||| ||||||||    
T  44687824 ccaaaactattttgcaatggaaatggtttctgtgagttggactccaaa 44687871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 24368519 - 24368469
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||| |||| ||||| ||| ||||||||||||| ||||    
T  24368519 atgccaaaaccattttgttgtgaaaatgatttttgtgagttgtacttcaaa 24368469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 30788883 - 30788833
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||| ||||||||||||| ||| ||||||||| ||||||||| ||||||||    
T  30788883 atgctaaaaccattttgcagtgaaaatggtttttgtgagttggactccaaa 30788833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 46590699 - 46590749
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||| ||||||||||| |||||||||| ||| ||||||||||||| ||||    
T  46590699 atgcctaaaccattttgttgtggaaatgatttttgtgagttgtacttcaaa 46590749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 120
Target Start/End: Complemental strand, 11422277 - 11422248
Alignment:
Q  91 cggaatgccaaaaccattttgctgtggaaa 120  Q
    ||||||||||||||||||||||||||||||    
T  11422277 cggaatgccaaaaccattttgctgtggaaa 11422248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 139
Target Start/End: Complemental strand, 37227299 - 37227258
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtac 139  Q
    ||||||||||||| ||||||||||||||||| || |||||||    
T  37227299 ccaaaaccatttttctgtggaaatggtttctatgtgttgtac 37227258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Complemental strand, 10497935 - 10497907
Alignment:
Q  117 gaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||    
T  10497935 gaaatggtttctgtgagttgtactccaaa 10497907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Complemental strand, 14390042 - 14390014
Alignment:
Q  117 gaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||    
T  14390042 gaaatggtttctgtgagttgtactccaaa 14390014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Complemental strand, 16116550 - 16116522
Alignment:
Q  117 gaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||    
T  16116550 gaaatggtttctgtgagttgtactccaaa 16116522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 17893118 - 17893146
Alignment:
Q  117 gaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||    
T  17893118 gaaatggtttctgtgagttgtactccaaa 17893146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 21256201 - 21256229
Alignment:
Q  117 gaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||    
T  21256201 gaaatggtttctgtgagttgtactccaaa 21256229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 23277328 - 23277356
Alignment:
Q  117 gaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||    
T  23277328 gaaatggtttctgtgagttgtactccaaa 23277356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 23921299 - 23921327
Alignment:
Q  117 gaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||    
T  23921299 gaaatggtttctgtgagttgtactccaaa 23921327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Complemental strand, 24368614 - 24368586
Alignment:
Q  117 gaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||    
T  24368614 gaaatggtttctgtgagttgtactccaaa 24368586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Complemental strand, 31084083 - 31084055
Alignment:
Q  117 gaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||    
T  31084083 gaaatggtttctgtgagttgtactccaaa 31084055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Complemental strand, 35754766 - 35754738
Alignment:
Q  117 gaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||    
T  35754766 gaaatggtttctgtgagttgtactccaaa 35754738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Complemental strand, 37642800 - 37642772
Alignment:
Q  117 gaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||    
T  37642800 gaaatggtttctgtgagttgtactccaaa 37642772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 45849154 - 45849182
Alignment:
Q  117 gaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||    
T  45849154 gaaatggtttctgtgagttgtactccaaa 45849182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 1e-34; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 89 - 202
Target Start/End: Original strand, 19384583 - 19384701
Alignment:
Q  89 accggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaacc-----cgtatggaaatggtttccagaatcttcaatctcatt 183  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||       | |||||||||||||||||||||||||||||||     
T  19384583 accgaaatgccaaaaccatttttctgtggaaatggtttctgtgagttgtactccaaaccattttgttgtggaaatggtttccagaatcttcaatctcatc 19384682  T
Q  184 atcaacaccgtcgttcatc 202  Q
    |||||||||||||||||||    
T  19384683 atcaacaccgtcgttcatc 19384701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 89 - 202
Target Start/End: Original strand, 52986695 - 52986814
Alignment:
Q  89 accggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcat 182  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||       | ||||||||||||||| |||||| ||||||||    
T  52986695 accggaatgccaaaaccattttgctatggaaatggtttctgtgagttgtactccaaacccattttgctgtggaaatggtttccaaaatcttgaatctcat 52986794  T
Q  183 tatcaacaccgtcgttcatc 202  Q
     |||||||||||||||||||    
T  52986795 catcaacaccgtcgttcatc 52986814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 89 - 202
Target Start/End: Original strand, 52986826 - 52986945
Alignment:
Q  89 accggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaacccgt------atggaaatggtttccagaatcttcaatctcat 182  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |       |||||||||||||||||||||| ||||||||    
T  52986826 accggaatgccaaaaccattttactgtggaaatggtttctatgagttgtactccaaacccattttgcagtggaaatggtttccagaatcttaaatctcat 52986925  T
Q  183 tatcaacaccgtcgttcatc 202  Q
     ||||| |||||||||||||    
T  52986926 catcaataccgtcgttcatc 52986945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 89 - 202
Target Start/End: Complemental strand, 31853024 - 31852905
Alignment:
Q  89 accggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcat 182  Q
    ||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||||       | ||||||||||||||| |||||||||||||||    
T  31853024 accggaatgccaaaatcatttatctgtggaaatggtttctgtgagttgtactccaaacccattttgctgtggaaatggtttccataatcttcaatctcat 31852925  T
Q  183 tatcaacaccgtcgttcatc 202  Q
     |||||||| ||||||||||    
T  31852924 catcaacactgtcgttcatc 31852905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 93 - 202
Target Start/End: Complemental strand, 50754899 - 50754784
Alignment:
Q  93 gaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcattatc 186  Q
    ||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||       | ||||||||||||||||||||||||||||||| |||    
T  50754899 gaatgccaaaaccatttagctatggaaatagtttctgtgagttgtactccaaacccattttgttgtggaaatggtttccagaatcttcaatctcatcatc 50754800  T
Q  187 aacaccgtcgttcatc 202  Q
    ||||| ||||||||||    
T  50754799 aacactgtcgttcatc 50754784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 93 - 202
Target Start/End: Complemental strand, 50755030 - 50754915
Alignment:
Q  93 gaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcattatc 186  Q
    ||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||       | ||||||||||||||||||||||||||||||| |||    
T  50755030 gaatgccaaaaccatttagctatggaaatagtttctgtgagttgtactccaaacccattttgttgtggaaatggtttccagaatcttcaatctcatcatc 50754931  T
Q  187 aacaccgtcgttcatc 202  Q
    ||||| ||||||||||    
T  50754930 aacactgtcgttcatc 50754915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 89 - 202
Target Start/End: Original strand, 51361715 - 51361834
Alignment:
Q  89 accggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcat 182  Q
    ||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||       | |||||||||||||||||||||| || |||||    
T  51361715 accggaatgccaaaaccattttgttgtggaaatgatttctctgagttgtactccaaacccattttgctgtggaaatggtttccagaatcttgaacctcat 51361814  T
Q  183 tatcaacaccgtcgttcatc 202  Q
     |||||||||| ||||||||    
T  51361815 catcaacaccgccgttcatc 51361834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 93 - 202
Target Start/End: Original strand, 7044574 - 7044687
Alignment:
Q  93 gaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaacccgtat------ggaaatggtttccagaatcttcaatctcattatc 186  Q
    ||||| ||||||||||||| |||| ||||| ||| ||||||||||||||||  ||| | |      |||||||||||||||||||||||||||||| |||    
T  7044574 gaatgtcaaaaccattttgttgtgaaaatgatttatgtgagttgtactcca--cccattttgttgtggaaatggtttccagaatcttcaatctcatcatc 7044671  T
Q  187 aacaccgtcgttcatc 202  Q
    ||||||||||||||||    
T  7044672 aacaccgtcgttcatc 7044687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 23755932 - 23755885
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  23755932 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 23755885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 8718951 - 8718901
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  8718951 atgccaaaaccattttgttgtggaaatggtttctgtgagttgtactccaaa 8718901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 9070838 - 9070788
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  9070838 atgccaaaaccattttgttgtggaaatggtttctgtgagttgtactccaaa 9070788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 16653600 - 16653550
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  16653600 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtacttcaaa 16653550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 19012495 - 19012445
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  19012495 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtacttcaaa 19012445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 27446153 - 27446203
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  27446153 atgccaaaaccattttgctgtggaaatggtttctgtgaattgtactccaaa 27446203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 47729007 - 47728957
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  47729007 atgccaaaaccattttgctgtggaaatggtttctatgagttgtactccaaa 47728957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 47924306 - 47924356
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  47924306 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactgcaaa 47924356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 51681419 - 51681469
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  51681419 atgccaaaatcattttgctgtggaaatggtttctgtgagttgtactccaaa 51681469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 95 - 144
Target Start/End: Original strand, 12974131 - 12974180
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaa 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  12974131 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtacaccaa 12974180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 145
Target Start/End: Complemental strand, 53595488 - 53595444
Alignment:
Q  101 aaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  53595488 aaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 53595444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 28299512 - 28299559
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  28299512 ccaaaaccattttgctatggaaatggtttctgtgagttgtactccaaa 28299559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 23756111 - 23756061
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  23756111 atgccaaaaccattttgatgtggaaatggcttctgtgagttgtactccaaa 23756061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 41191616 - 41191666
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  41191616 atgccaaaatcattttgctgtggaaatggtttttgtgagttgtactccaaa 41191666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 100 - 145
Target Start/End: Original strand, 16276904 - 16276949
Alignment:
Q  100 aaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  16276904 aaaaacattttgctgtggaaatggtttctgtgagttgtactccaaa 16276949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 23699924 - 23699877
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  23699924 ccaaaaccattctgctgtggaaatggtttctgtgagttgtattccaaa 23699877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 23718379 - 23718332
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  23718379 ccaaaaccattctgctgtggaaatggtttctgtgagttgtattccaaa 23718332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 23736835 - 23736788
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  23736835 ccaaaaccattctgctgtggaaatggtttctgtgagttgtattccaaa 23736788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 28299555 - 28299602
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||    
T  28299555 ccaaaaccattttgttgtggaaatggtttccgtgagttgtactccaaa 28299602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 39194554 - 39194601
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||    
T  39194554 ccaaaaccattttgatgtggaaatggtttatgtgagttgtactccaaa 39194601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 41191796 - 41191843
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||    
T  41191796 ccaaaaccattttgttgtggaaatggtttctgtgtgttgtactccaaa 41191843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 8036929 - 8036979
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||| ||||||||||||||  ||||||||||||||||    
T  8036929 atgccaaaaccattttgcggtggaaatggtttccttgagttgtactccaaa 8036979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 28299470 - 28299516
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||    
T  28299470 caaaaccattttgcagtggaaatggtttctgtgagttggactccaaa 28299516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 34562610 - 34562656
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||    
T  34562610 caaaaccattttgctgtgaaaatggtttatgtgagttgtactccaaa 34562656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 36185849 - 36185895
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||    
T  36185849 caaaaccatttttctgtggaaatggtttttgtgagttgtactccaaa 36185895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 49053370 - 49053416
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||    
T  49053370 caaaatcattttgctgtggaaatggtttctgtgagttgtacttcaaa 49053416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 138
Target Start/End: Complemental strand, 53595534 - 53595494
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgta 138  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  53595534 ccaaaaccattttgatgtggaaatggtttctgtgagttgta 53595494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 141
Target Start/End: Original strand, 34562787 - 34562830
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactc 141  Q
    |||||||||||||||||||||||||||||||||| |||| ||||    
T  34562787 ccaaaaccattttgctgtggaaatggtttctgtgcgttgaactc 34562830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 9643038 - 9643088
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||| |||||||||| ||||||||||||| ||| ||||    
T  9643038 atgccaaaaccattttggtgtggaaatgatttctgtgagttggacttcaaa 9643088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 14743647 - 14743597
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||| ||||||||||||||||  ||| ||||||||||||||||||    
T  14743647 atgccaaaactattttgctgtggaaataatttatgtgagttgtactccaaa 14743597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 38345384 - 38345334
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||| ||||||||||||||||| |||| | |||||||    
T  38345384 atgccaaaaccattttgccgtggaaatggtttctgtaagttatcctccaaa 38345334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 51846214 - 51846264
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||| ||||||||||||| ||||||| |||||||| ||||||||||||||    
T  51846214 atgcctaaaccattttgctatggaaattgtttctgtcagttgtactccaaa 51846264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 202
Target Start/End: Original strand, 7044511 - 7044546
Alignment:
Q  167 gaatcttcaatctcattatcaacaccgtcgttcatc 202  Q
    |||||||||||||||| |||||||||||||||||||    
T  7044511 gaatcttcaatctcatcatcaacaccgtcgttcatc 7044546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 202
Target Start/End: Original strand, 19384536 - 19384571
Alignment:
Q  167 gaatcttcaatctcattatcaacaccgtcgttcatc 202  Q
    |||||||||||||||| |||||||||||||||||||    
T  19384536 gaatcttcaatctcatcatcaacaccgtcgttcatc 19384571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 120
Target Start/End: Complemental strand, 50754772 - 50754741
Alignment:
Q  89 accggaatgccaaaaccattttgctgtggaaa 120  Q
    ||||||||||||||||||||||||||||||||    
T  50754772 accggaatgccaaaaccattttgctgtggaaa 50754741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 202
Target Start/End: Complemental strand, 50755081 - 50755046
Alignment:
Q  167 gaatcttcaatctcattatcaacaccgtcgttcatc 202  Q
    |||||||||||||||||||||||| |||||||||||    
T  50755081 gaatcttcaatctcattatcaacagcgtcgttcatc 50755046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 202
Target Start/End: Original strand, 51361668 - 51361703
Alignment:
Q  167 gaatcttcaatctcattatcaacaccgtcgttcatc 202  Q
    |||||||||||||||| |||||||||||||||||||    
T  51361668 gaatcttcaatctcatcatcaacaccgtcgttcatc 51361703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 120
Target Start/End: Original strand, 51361842 - 51361873
Alignment:
Q  89 accggaatgccaaaaccattttgctgtggaaa 120  Q
    ||||||||||||||||||||||||||||||||    
T  51361842 accggaatgccaaaaccattttgctgtggaaa 51361873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 120
Target Start/End: Original strand, 52986957 - 52986988
Alignment:
Q  89 accggaatgccaaaaccattttgctgtggaaa 120  Q
    ||||||||||||||||||||||||||||||||    
T  52986957 accggaatgccaaaaccattttgctgtggaaa 52986988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 145
Target Start/End: Complemental strand, 53595573 - 53595530
Alignment:
Q  102 aaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||| ||||||||||||| ||||||||| ||||||||    
T  53595573 aaccattttgcagtggaaatggtttatgtgagttggactccaaa 53595530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 8061603 - 8061557
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||| ||||||||| |||||||  |||||||||||||||||    
T  8061603 caaaaccattgtgctgtggagatggttttggtgagttgtactccaaa 8061557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 30794949 - 30794903
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||| ||||||||||| |||||||||||||||| | |||||||||    
T  30794949 caaaactattttgctgtgaaaatggtttctgtgagctatactccaaa 30794903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 201
Target Start/End: Original strand, 52986636 - 52986670
Alignment:
Q  167 gaatcttcaatctcattatcaacaccgtcgttcat 201  Q
    |||||||||||||||| ||||||||||||||||||    
T  52986636 gaatcttcaatctcatcatcaacaccgtcgttcat 52986670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 112 - 145
Target Start/End: Original strand, 9183781 - 9183814
Alignment:
Q  112 ctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||| ||||||||||||||||||||||||||||    
T  9183781 ctgtgaaaatggtttctgtgagttgtactccaaa 9183814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 139
Target Start/End: Complemental strand, 11982849 - 11982808
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtac 139  Q
    ||||||||||||| ||||||||||||||||| || |||||||    
T  11982849 ccaaaaccatttttctgtggaaatggtttctatgtgttgtac 11982808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Complemental strand, 19012560 - 19012532
Alignment:
Q  117 gaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||    
T  19012560 gaaatggtttctgtgagttgtactccaaa 19012532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Complemental strand, 23755956 - 23755928
Alignment:
Q  117 gaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||    
T  23755956 gaaatggtttctgtgagttgtactccaaa 23755928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 34562763 - 34562791
Alignment:
Q  117 gaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||    
T  34562763 gaaatggtttctgtgagttgtactccaaa 34562791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 35221594 - 35221622
Alignment:
Q  117 gaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||    
T  35221594 gaaatggtttctgtgagttgtactccaaa 35221622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 36185772 - 36185800
Alignment:
Q  117 gaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||    
T  36185772 gaaatggtttctgtgagttgtactccaaa 36185800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 73; Significance: 2e-33; HSPs: 79)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 89 - 202
Target Start/End: Complemental strand, 38245765 - 38245646
Alignment:
Q  89 accggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcat 182  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||       | |||||||||||||||||||||| ||||||||    
T  38245765 accggaatgccaaaaccattttgctgtgtaaatggtttctgtgagttgtactacaaacccattttgttgtggaaatggtttccagaatcttaaatctcat 38245666  T
Q  183 tatcaacaccgtcgttcatc 202  Q
     |||||||||||||||||||    
T  38245665 catcaacaccgtcgttcatc 38245646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 89 - 202
Target Start/End: Complemental strand, 10473359 - 10473241
Alignment:
Q  89 accggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc-----gtatggaaatggtttccagaatcttcaatctcatt 183  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     ||   | |||||||||||||||||||||||||||     
T  10473359 accggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaacccattttgttgtggaatggtttccagaatcttcaatctcatc 10473260  T
Q  184 atcaacaccgtcgttcatc 202  Q
    ||||||| ||| |||||||    
T  10473259 atcaacatcgttgttcatc 10473241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 89 - 202
Target Start/End: Complemental strand, 10473490 - 10473371
Alignment:
Q  89 accggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcat 182  Q
    |||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||       | |||||||||||||||||||||||||||||||    
T  10473490 accggaatgccaaaactattttgttgtggaaatagtttctgtgagttgtactccaaacccattttgttgtggaaatggtttccagaatcttcaatctcat 10473391  T
Q  183 tatcaacaccgtcgttcatc 202  Q
     |||||||| ||||||||||    
T  10473390 catcaacactgtcgttcatc 10473371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 89 - 202
Target Start/End: Complemental strand, 45256730 - 45256611
Alignment:
Q  89 accggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcat 182  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||       | ||||||||||||| |||||||||||||||||    
T  45256730 accggaatgccaaaaccattttgctgtagaaatggtttatgtgagttgtattccaaacccattttgttgtggaaatggtttcgagaatcttcaatctcat 45256631  T
Q  183 tatcaacaccgtcgttcatc 202  Q
     |||||||||||||||||||    
T  45256630 catcaacaccgtcgttcatc 45256611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 89 - 202
Target Start/End: Complemental strand, 638836 - 638717
Alignment:
Q  89 accggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctcat 182  Q
    |||||||||||||||||||||| || |||||||||||| |||||||||||||||||||||       | ||||||||||||| |||||||||||||||||    
T  638836 accggaatgccaaaaccatttttctatggaaatggtttttgtgagttgtactccaaacccattttgctgtggaaatggtttctagaatcttcaatctcat 638737  T
Q  183 tatcaacaccgtcgttcatc 202  Q
     |||||||||||| ||||||    
T  638736 catcaacaccgtcattcatc 638717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 93 - 145
Target Start/End: Complemental strand, 50644542 - 50644490
Alignment:
Q  93 gaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50644542 gaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 50644490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 12722878 - 12722928
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12722878 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 12722928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 17109859 - 17109909
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17109859 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 17109909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 21995774 - 21995724
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21995774 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 21995724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 54895508 - 54895458
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54895508 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 54895458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 6385733 - 6385783
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  6385733 atgccaaaaccattttgctgtggaaatggtttctgtgagttggactccaaa 6385783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 8157229 - 8157279
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  8157229 atgccaaaaccattttgttgtggaaatggtttctgtgagttgtactccaaa 8157279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 9553068 - 9553118
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  9553068 atgccaaaatcattttgctgtggaaatggtttctgtgagttgtactccaaa 9553118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 25573595 - 25573645
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  25573595 atgccaaaaccattttgctgtggaaatggtttctgtgagttggactccaaa 25573645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 89 - 180
Target Start/End: Original strand, 26577458 - 26577554
Alignment:
Q  89 accggaatgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaaccc------gtatggaaatggtttccagaatcttcaatctc 180  Q
    |||||||||||| | |||||||| |||||||||||||||||||||||||| |||||||||       | |||||||||||||||||||||||||||||    
T  26577458 accggaatgccata-ccattttgttgtggaaatggtttctgtgagttgtaatccaaacccattttgatgtggaaatggtttccagaatcttcaatctc 26577554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 27765103 - 27765053
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  27765103 atgccaaaaccattttgctgtggaaatggtttgtgtgagttgtactccaaa 27765053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 31763048 - 31763098
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  31763048 atgccaaaaccattttggtgtggaaatggtttctgtgagttgtactccaaa 31763098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 36924341 - 36924295
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  36924341 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 36924295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 50562891 - 50562941
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  50562891 atgccaaaaccattttgctgtgtaaatggtttctgtgagttgtactccaaa 50562941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 6385779 - 6385826
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  6385779 ccaaaaccattttgctgtggaaatggtttctatgagttgtactccaaa 6385826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 29826090 - 29826137
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||    
T  29826090 ccaaaaccattttgctgtggaaatggtttctgtgtgttgtactccaaa 29826137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 2124485 - 2124535
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  2124485 atgccaaaatcattttgctgtggaaatggtttctgtgagttttactccaaa 2124535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 8166018 - 8166068
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  8166018 atgcaaaaactattttgctgtggaaatggtttctgtgagttgtactccaaa 8166068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 10374147 - 10374097
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  10374147 atgccaaaaccattttgccgtgaaaatggtttctgtgagttgtactccaaa 10374097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 16474964 - 16475010
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||    
T  16474964 caaaaccattttgttgtggaaatggtttctgtgagttgtactccaaa 16475010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 18924101 - 18924051
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  18924101 atgccaaaaccattttgctgtggaaattgtttctgtgagttgtacttcaaa 18924051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 21097956 - 21097906
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  21097956 atgccaaaaccattttgatgtggaaatggtttatgtgagttgtactccaaa 21097906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 30358670 - 30358628
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgtgagttgtactc 141  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  30358670 caaaaccattttgctgtggaaatggtttctgtgagttgtactc 30358628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 37059855 - 37059905
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  37059855 atgccaaaactattttgctgtggaaatggtttttgtgagttgtactccaaa 37059905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 43374551 - 43374501
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  43374551 atgccaaaaccattttgctatggaaatggtttatgtgagttgtactccaaa 43374501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 100 - 145
Target Start/End: Original strand, 22180430 - 22180475
Alignment:
Q  100 aaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  22180430 aaaaccattttgctgtggaaatggtttatgtgagttgtactccaaa 22180475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 100 - 145
Target Start/End: Original strand, 49137340 - 49137385
Alignment:
Q  100 aaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  49137340 aaaaccattttgctgtggaaatggtttatgtgagttgtactccaaa 49137385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 142
Target Start/End: Original strand, 25573641 - 25573685
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactcc 142  Q
    |||||||||||||| ||||||||||||||||||||||||||||||    
T  25573641 ccaaaaccattttgttgtggaaatggtttctgtgagttgtactcc 25573685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 1729007 - 1729054
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||    
T  1729007 ccaaaaccattttgctgtggaaatgatttctgtgtgttgtactccaaa 1729054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 95 - 138
Target Start/End: Complemental strand, 4169243 - 4169200
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgta 138  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
T  4169243 atgccaaaactattttgctgtggaaatggtttctgtgagttgta 4169200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 145
Target Start/End: Original strand, 29825918 - 29825961
Alignment:
Q  102 aaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  29825918 aaccattttgctgtggaaatggtttctgtgagttctactccaaa 29825961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 38010551 - 38010504
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||    
T  38010551 ccaaaaccattttgttgtggaaatggtttttgtgagttgtactccaaa 38010504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 1492772 - 1492726
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||| || |||||||||||||||||||||||||||||||    
T  1492772 caaaaccattttactatggaaatggtttctgtgagttgtactccaaa 1492726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 6841960 - 6842010
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||| ||||||||||| ||||||||||||||||||| ||||||||||||||    
T  6841960 atgctaaaaccattttactgtggaaatggtttctgtaagttgtactccaaa 6842010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 8165902 - 8165952
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||| ||||| ||||||||||||||||||||||||||||||||| ||||||    
T  8165902 atgcaaaaactattttgctgtggaaatggtttctgtgagttgtattccaaa 8165952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 36309516 - 36309470
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||    
T  36309516 caaaaccattttgctgtggaaatgatttatgtgagttgtactccaaa 36309470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 48077317 - 48077363
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||| ||||||||||||||||||||||||||||||||||| |||||    
T  48077317 caaaatcattttgctgtggaaatggtttctgtgagttgtacaccaaa 48077363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 145
Target Start/End: Original strand, 43852156 - 43852201
Alignment:
Q  100 aaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||    
T  43852156 aaaatcattttgctgtggaattggtttctgtgagttgtactccaaa 43852201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 145
Target Start/End: Original strand, 25573687 - 25573731
Alignment:
Q  101 aaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||    
T  25573687 aaaccattttgttgtggaaatggtttttgtgagttgtactccaaa 25573731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 142
Target Start/End: Original strand, 49137513 - 49137557
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactcc 142  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||    
T  49137513 ccaaaaccattttgttgtggaaatggtttctgtgtgttgtactcc 49137557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 141
Target Start/End: Complemental strand, 16299425 - 16299386
Alignment:
Q  102 aaccattttgctgtggaaatggtttctgtgagttgtactc 141  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  16299425 aaccattttgcagtggaaatggtttctgtgagttgtactc 16299386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 33883426 - 33883473
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||| |||||| ||||||||||||||| ||||||||||||||||||    
T  33883426 ccaaaatcattttactgtggaaatggtttatgtgagttgtactccaaa 33883473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 6768503 - 6768457
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||| ||||||||||| ||||||||||| ||||||||||||||||    
T  6768503 caaaactattttgctgtgaaaatggtttctatgagttgtactccaaa 6768457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 164 - 202
Target Start/End: Original strand, 9551769 - 9551807
Alignment:
Q  164 ccagaatcttcaatctcattatcaacaccgtcgttcatc 202  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  9551769 ccagaatcttcaatctcatcatcaacaccgtcgttcatc 9551807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 9967814 - 9967860
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||| || |||||||||||||||||| ||||||||||||    
T  9967814 caaaaccattttactatggaaatggtttctgtgaattgtactccaaa 9967860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 20862386 - 20862336
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||  |||||||||||||||| |||| ||||||||||||||||||    
T  20862386 atgccaaaattattttgctgtggaaatagtttatgtgagttgtactccaaa 20862336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 24687083 - 24687037
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||| ||||| ||||||| ||||    
T  24687083 caaaaccattttgctgtggaaatggtttttgtgatttgtacttcaaa 24687037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 27872939 - 27872989
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||| ||| |||| |||||||||||||||||| ||||    
T  27872939 atgccaaaaccattttgccgtgaaaatagtttctgtgagttgtacttcaaa 27872989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 36621182 - 36621228
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||| ||| |||||||| |||||||||    
T  36621182 caaaaccattttgctgtggaaatgatttttgtgagttatactccaaa 36621228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 47567996 - 47567950
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||| || |||||||||||||||||| ||||||||||||    
T  47567996 caaaaccattttactatggaaatggtttctgtgaattgtactccaaa 47567950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 52325203 - 52325158
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||    
T  52325203 caaaaccattttgctgtggaaatggtttctgtga-ttgtacttcaaa 52325158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 145
Target Start/End: Complemental strand, 16299384 - 16299339
Alignment:
Q  100 aaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||| ||||||| |||||||||||||||||||||||||||| ||||    
T  16299384 aaaatcattttgatgtggaaatggtttctgtgagttgtacttcaaa 16299339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 202
Target Start/End: Complemental strand, 638883 - 638848
Alignment:
Q  167 gaatcttcaatctcattatcaacaccgtcgttcatc 202  Q
    |||||||||||||||| |||||||||||||||||||    
T  638883 gaatcttcaatctcatcatcaacaccgtcgttcatc 638848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 202
Target Start/End: Complemental strand, 10473537 - 10473502
Alignment:
Q  167 gaatcttcaatctcattatcaacaccgtcgttcatc 202  Q
    |||||||||||||||| |||||||||||||||||||    
T  10473537 gaatcttcaatctcatcatcaacaccgtcgttcatc 10473502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 50644360 - 50644313
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||||||||||| ||| ||||||||  ||||||||    
T  50644360 ccaaaaccattttgctgtggaaatgatttatgtgagttacactccaaa 50644313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 202
Target Start/End: Original strand, 51836475 - 51836510
Alignment:
Q  167 gaatcttcaatctcattatcaacaccgtcgttcatc 202  Q
    |||||||||||||||| |||||||||||||||||||    
T  51836475 gaatcttcaatctcatcatcaacaccgtcgttcatc 51836510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 120
Target Start/End: Original strand, 51836522 - 51836553
Alignment:
Q  89 accggaatgccaaaaccattttgctgtggaaa 120  Q
    ||||||||||||||||||||||||||||||||    
T  51836522 accggaatgccaaaaccattttgctgtggaaa 51836553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 144
Target Start/End: Original strand, 9552196 - 9552226
Alignment:
Q  114 gtggaaatggtttctgtgagttgtactccaa 144  Q
    |||||||||||||||||||||||||||||||    
T  9552196 gtggaaatggtttctgtgagttgtactccaa 9552226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 24687126 - 24687080
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||| ||||||| ||||||||||||||||||||||| ||| ||||    
T  24687126 caaaactattttgcagtggaaatggtttctgtgagttgaacttcaaa 24687080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 145
Target Start/End: Complemental strand, 30358451 - 30358413
Alignment:
Q  107 ttttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  30358451 ttttgttgtggaaatggtttctgtgtgttgtactccaaa 30358413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 30779646 - 30779696
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||| |||||| ||||||||||| ||| ||||||||||| ||||||    
T  30779646 atgccaaaatcattttactgtggaaatgatttatgtgagttgtattccaaa 30779696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 42788619 - 42788665
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||| |||||||||||| ||||||||||| |||||||||| |||||    
T  42788619 caaaatcattttgctgtgaaaatggtttctatgagttgtacaccaaa 42788665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 53526355 - 53526305
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||||| || ||||  ||||| ||||||||||||||||    
T  53526355 atgccaaaaccattttgctatgaaaataatttctatgagttgtactccaaa 53526305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 53865168 - 53865118
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||||||||||| |  |||||||||  |||||||||||||||||    
T  53865168 atgccaaaaccattttgctataaaaatggttttcgtgagttgtactccaaa 53865118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 132
Target Start/End: Original strand, 562889 - 562926
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtga 132  Q
    |||| ||||| |||||||||||||||||||||||||||    
T  562889 atgcaaaaactattttgctgtggaaatggtttctgtga 562926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Complemental strand, 4169088 - 4169060
Alignment:
Q  117 gaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||    
T  4169088 gaaatggtttctgtgagttgtactccaaa 4169060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 12722784 - 12722812
Alignment:
Q  117 gaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||    
T  12722784 gaaatggtttctgtgagttgtactccaaa 12722812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Complemental strand, 21097802 - 21097774
Alignment:
Q  117 gaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||    
T  21097802 gaaatggtttctgtgagttgtactccaaa 21097774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 22180580 - 22180608
Alignment:
Q  117 gaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||    
T  22180580 gaaatggtttctgtgagttgtactccaaa 22180608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Complemental strand, 27764950 - 27764922
Alignment:
Q  117 gaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||    
T  27764950 gaaatggtttctgtgagttgtactccaaa 27764922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 29826066 - 29826094
Alignment:
Q  117 gaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||    
T  29826066 gaaatggtttctgtgagttgtactccaaa 29826094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Complemental strand, 38010575 - 38010547
Alignment:
Q  117 gaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||    
T  38010575 gaaatggtttctgtgagttgtactccaaa 38010547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Complemental strand, 50644384 - 50644356
Alignment:
Q  117 gaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||    
T  50644384 gaaatggtttctgtgagttgtactccaaa 50644356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Complemental strand, 53865241 - 53865213
Alignment:
Q  117 gaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||    
T  53865241 gaaatggtttctgtgagttgtactccaaa 53865213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 28489 - 28439
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28489 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 28439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 14442 - 14396
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  14442 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 14396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Complemental strand, 14291 - 14263
Alignment:
Q  117 gaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||    
T  14291 gaaatggtttctgtgagttgtactccaaa 14263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 23673 - 23723
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  23673 atgccaaaattattttgctgtggaaatggtttctgtgagttgtactccaaa 23723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 72617 - 72567
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  72617 atgccaaaaccattttgctgtgcaaatgatttctgtgagttgtactccaaa 72567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 203132 - 203182
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  203132 atgccaaaactattttgctgtggaaattgtttctgtgagttgtactccaaa 203182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 203288 - 203316
Alignment:
Q  117 gaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||    
T  203288 gaaatggtttctgtgagttgtactccaaa 203316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 96103 - 96053
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  96103 atgctaaaaccattttgctgtggaaatggtttctgtgatttgtactccaaa 96053  T

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Target: scaffold0291 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 9650 - 9700
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||| |||||||||||||||| |||| ||||||||||||||||||    
T  9650 atgccaaaactattttgctgtggaaatagtttatgtgagttgtactccaaa 9700  T

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Target: scaffold0126 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 37737 - 37687
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||| |||||||||||| ||||| ||||||||||||||||||||||    
T  37737 atgccaaaatcattttgctgtgaaaatgatttctgtgagttgtactccaaa 37687  T

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Target: scaffold0129 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 20064 - 20109
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaa 144  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||    
T  20064 caaaaccattttgttgtggaaattgtttctgtgagttgtactccaa 20109  T

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Target: scaffold0455 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0455
Description:

Target: scaffold0455; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 8003 - 7956
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||||| |||||||||||||||||  |||||||||||||||||    
T  8003 ccaaaaccattgtgctgtggaaatggttttggtgagttgtactccaaa 7956  T

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Target: scaffold0102 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 33720 - 33670
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    ||||||||| |||||||||||| ||||| ||||||||||||||| ||||||    
T  33720 atgccaaaatcattttgctgtgaaaatgatttctgtgagttgtattccaaa 33670  T

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Target: scaffold0534 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0534
Description:

Target: scaffold0534; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 10010 - 9962
Alignment:
Q  97 gccaaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||| |||||||||||||||||  |||||||||| ||||||    
T  10010 gccaaaaccattgtgctgtggaaatggttttggtgagttgtaatccaaa 9962  T

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Target: scaffold0036 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 108700 - 108654
Alignment:
Q  99 caaaaccattttgctgtggaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||| ||||||||| |||||||  |||||||||||||||||    
T  108700 caaaaccattgtgctgtggagatggttttggtgagttgtactccaaa 108654  T

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Target: scaffold0036; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 139
Target Start/End: Complemental strand, 108612 - 108571
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtac 139  Q
    ||||||||||||| ||||||||||||||||| || |||||||    
T  108612 ccaaaaccatttttctgtggaaatggtttctatgtgttgtac 108571  T

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Target: scaffold0031 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 141
Target Start/End: Original strand, 80807 - 80853
Alignment:
Q  95 atgccaaaaccattttgctgtggaaatggtttctgtgagttgtactc 141  Q
    |||| ||||||||||| |||| ||||||||||||||||||| |||||    
T  80807 atgcaaaaaccattttactgtagaaatggtttctgtgagttatactc 80853  T

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Target: scaffold0023 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 139
Target Start/End: Original strand, 120310 - 120351
Alignment:
Q  98 ccaaaaccattttgctgtggaaatggtttctgtgagttgtac 139  Q
    ||||||||||||| ||||||||||||||||| || |||||||    
T  120310 ccaaaaccatttttctgtggaaatggtttctatgtgttgtac 120351  T

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Target: scaffold0664 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Complemental strand, 3152 - 3124
Alignment:
Q  117 gaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||    
T  3152 gaaatggtttctgtgagttgtactccaaa 3124  T

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Target: scaffold0516 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Complemental strand, 1246 - 1218
Alignment:
Q  117 gaaatggtttctgtgagttgtactccaaa 145  Q
    |||||||||||||||||||||||||||||    
T  1246 gaaatggtttctgtgagttgtactccaaa 1218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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