View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0306_low_10 (Length: 281)
Name: NF0306_low_10
Description: NF0306
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0306_low_10 |
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Alignment Details
Target: chr2 (Bit Score: 178; Significance: 5e-96; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 8188048 - 8187863
Alignment:
| Q |
1 |
tcctcctctccatgttcagaatctactgcactacagatttgctcattatccgttatcttttccaaatctatatccatagatggcccactatctacaacat |
100 |
Q |
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| T |
8188048 |
tcctcctcgccatgttcagaatctactgcactacagatttgctcattatccgttatcttttccaaatctatatccatagatggcccactatctacaacat |
8187949 |
T |
|
| Q |
101 |
tacgatccaatccatcaccttcagaactcaaacttgatgaagcatccgaaagtgtttcctttagaaacaaaggattaaagtctgca |
186 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
8187948 |
tacgatccaatccatcaccttcagaactcaaacttgatgaagcatctgaaagtgtttcctttagaaacaaaggattaaagtctgca |
8187863 |
T |
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