View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0309_low_4 (Length: 529)

Name: NF0309_low_4
Description: NF0309
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0309_low_4
NF0309_low_4
[»] chr6 (45 HSPs)
chr6 (30-418)||(14771721-14772115)
chr6 (184-386)||(20850231-20850433)
chr6 (184-415)||(21311881-21312112)
chr6 (186-418)||(3652398-3652630)
chr6 (184-417)||(2681219-2681452)
chr6 (185-386)||(23986351-23986552)
chr6 (184-418)||(6330914-6331148)
chr6 (184-416)||(20896692-20896924)
chr6 (216-386)||(27334103-27334273)
chr6 (216-386)||(27394843-27395013)
chr6 (183-376)||(2720608-2720801)
chr6 (184-418)||(2890841-2891073)
chr6 (184-418)||(11062196-11062429)
chr6 (186-417)||(17851286-17851517)
chr6 (274-418)||(17027533-17027677)
chr6 (273-418)||(7911877-7912022)
chr6 (184-417)||(20126185-20126418)
chr6 (182-418)||(17850826-17851062)
chr6 (184-346)||(3652889-3653051)
chr6 (185-417)||(23776352-23776584)
chr6 (273-415)||(7912309-7912451)
chr6 (181-418)||(33775004-33775243)
chr6 (272-386)||(9440343-9440457)
chr6 (273-418)||(13492788-13492933)
chr6 (183-386)||(21311423-21311627)
chr6 (184-418)||(15929492-15929726)
chr6 (274-386)||(13191547-13191659)
chr6 (273-377)||(17731156-17731260)
chr6 (273-418)||(16519967-16520112)
chr6 (252-384)||(31821728-31821860)
chr6 (186-386)||(15929111-15929311)
chr6 (199-415)||(20735621-20735836)
chr6 (273-363)||(9440485-9440575)
chr6 (305-395)||(9440882-9440972)
chr6 (305-394)||(32292916-32293005)
chr6 (274-418)||(9352062-9352206)
chr6 (338-418)||(13492396-13492476)
chr6 (328-384)||(28065874-28065930)
chr6 (272-418)||(12194328-12194472)
chr6 (270-415)||(17205335-17205479)
chr6 (305-382)||(28582995-28583071)
chr6 (323-418)||(1991602-1991697)
chr6 (323-386)||(20732627-20732690)
chr6 (323-359)||(9441099-9441135)
chr6 (321-384)||(3885123-3885186)
[»] chr8 (43 HSPs)
chr8 (184-418)||(10844793-10845027)
chr8 (184-418)||(22026289-22026523)
chr8 (184-418)||(27925809-27926043)
chr8 (184-418)||(32292307-32292541)
chr8 (183-418)||(8080344-8080579)
chr8 (184-386)||(22549029-22549231)
chr8 (183-418)||(12827256-12827491)
chr8 (183-386)||(41659139-41659341)
chr8 (184-418)||(6464912-6465146)
chr8 (184-386)||(22548583-22548785)
chr8 (184-418)||(28453249-28453482)
chr8 (184-417)||(33852261-33852493)
chr8 (182-384)||(27022374-27022576)
chr8 (184-386)||(28375088-28375290)
chr8 (184-418)||(22840531-22840765)
chr8 (192-386)||(27021913-27022111)
chr8 (273-417)||(34308482-34308626)
chr8 (272-418)||(10844617-10844763)
chr8 (252-418)||(2044036-2044202)
chr8 (273-418)||(25144771-25144916)
chr8 (273-418)||(34308937-34309086)
chr8 (294-418)||(12100711-12100835)
chr8 (298-414)||(41912994-41913110)
chr8 (282-416)||(17103089-17103223)
chr8 (273-418)||(21316111-21316256)
chr8 (283-384)||(22705181-22705282)
chr8 (274-415)||(25147536-25147677)
chr8 (284-418)||(25147977-25148111)
chr8 (323-418)||(3745150-3745245)
chr8 (323-386)||(27819280-27819343)
chr8 (300-413)||(3744664-3744777)
chr8 (211-384)||(6466648-6466820)
chr8 (323-414)||(15567562-15567653)
chr8 (307-377)||(1297040-1297110)
chr8 (268-386)||(30334942-30335060)
chr8 (323-386)||(15819049-15819112)
chr8 (273-418)||(30527484-30527626)
chr8 (325-384)||(15568041-15568100)
chr8 (352-418)||(31283653-31283719)
chr8 (321-385)||(17429547-17429611)
chr8 (293-371)||(29971450-29971528)
chr8 (346-415)||(6466329-6466397)
chr8 (324-381)||(36968434-36968491)
[»] chr5 (43 HSPs)
chr5 (184-415)||(34867700-34867931)
chr5 (182-386)||(34371520-34371724)
chr5 (184-418)||(2193726-2193960)
chr5 (184-386)||(34371978-34372180)
chr5 (184-418)||(10926948-10927183)
chr5 (183-418)||(20039477-20039711)
chr5 (184-415)||(21886151-21886382)
chr5 (184-418)||(39146849-39147083)
chr5 (196-418)||(10927405-10927628)
chr5 (184-418)||(27646837-27647072)
chr5 (182-386)||(42788680-42788883)
chr5 (177-386)||(17445489-17445698)
chr5 (184-386)||(18304341-18304543)
chr5 (182-417)||(5066894-5067128)
chr5 (184-417)||(15513015-15513249)
chr5 (273-418)||(189067-189212)
chr5 (273-418)||(8642036-8642181)
chr5 (273-386)||(22556535-22556648)
chr5 (305-417)||(1821937-1822049)
chr5 (273-418)||(3886603-3886748)
chr5 (273-418)||(2473958-2474103)
chr5 (273-386)||(3887091-3887204)
chr5 (273-386)||(22556968-22557081)
chr5 (273-418)||(2474404-2474549)
chr5 (183-418)||(1879990-1880220)
chr5 (195-418)||(4657995-4658217)
chr5 (305-415)||(18750201-18750311)
chr5 (273-354)||(22975076-22975157)
chr5 (272-415)||(8391327-8391469)
chr5 (321-395)||(16370733-16370807)
chr5 (272-386)||(30719839-30719953)
chr5 (300-418)||(29680109-29680220)
chr5 (324-386)||(24182279-24182341)
chr5 (274-386)||(30684590-30684702)
chr5 (300-418)||(4673473-4673591)
chr5 (240-386)||(11160715-11160861)
chr5 (328-380)||(2058696-2058748)
chr5 (323-386)||(42429194-42429257)
chr5 (328-415)||(20858546-20858633)
chr5 (351-384)||(39801498-39801531)
chr5 (339-391)||(43356649-43356701)
chr5 (338-384)||(32574694-32574740)
chr5 (354-418)||(11757283-11757347)
[»] chr4 (59 HSPs)
chr4 (184-418)||(12691995-12692229)
chr4 (184-418)||(1645745-1645979)
chr4 (184-418)||(23942785-23943016)
chr4 (184-412)||(4127891-4128120)
chr4 (184-418)||(4127433-4127668)
chr4 (184-415)||(50398537-50398768)
chr4 (186-418)||(24628973-24629208)
chr4 (184-386)||(24629461-24629662)
chr4 (184-417)||(3169116-3169349)
chr4 (184-410)||(9423862-9424088)
chr4 (183-418)||(50398989-50399224)
chr4 (182-418)||(29628664-29628899)
chr4 (184-418)||(14351705-14351939)
chr4 (184-418)||(21067648-21067875)
chr4 (224-386)||(21220359-21220521)
chr4 (184-418)||(53996111-53996345)
chr4 (212-386)||(21067220-21067394)
chr4 (186-418)||(51331277-51331509)
chr4 (183-412)||(31817854-31818083)
chr4 (273-386)||(14572178-14572291)
chr4 (188-418)||(23943238-23943464)
chr4 (274-418)||(49998636-49998780)
chr4 (184-386)||(8467828-8468029)
chr4 (285-418)||(14571717-14571850)
chr4 (273-386)||(23350311-23350424)
chr4 (273-418)||(35871627-35871771)
chr4 (273-418)||(44471321-44471466)
chr4 (184-417)||(1464057-1464290)
chr4 (323-418)||(7678618-7678713)
chr4 (294-386)||(17628531-17628623)
chr4 (325-417)||(43928961-43929052)
chr4 (184-418)||(27029188-27029421)
chr4 (324-386)||(44470902-44470964)
chr4 (213-363)||(53854858-53855008)
chr4 (184-384)||(27026414-27026613)
chr4 (195-386)||(31817426-31817617)
chr4 (303-384)||(13266115-13266196)
chr4 (340-418)||(50814821-50814899)
chr4 (273-418)||(17029329-17029474)
chr4 (274-386)||(41869918-41870030)
chr4 (282-418)||(52048663-52048798)
chr4 (273-384)||(17028873-17028984)
chr4 (272-386)||(13613925-13614039)
chr4 (338-384)||(20306191-20306237)
chr4 (321-386)||(23976247-23976312)
chr4 (292-392)||(17628986-17629086)
chr4 (331-418)||(4186224-4186311)
chr4 (323-418)||(44831046-44831141)
chr4 (340-386)||(27578485-27578531)
chr4 (343-417)||(33764929-33765003)
chr4 (284-418)||(15306087-15306227)
chr4 (300-395)||(4185741-4185836)
chr4 (341-384)||(42838690-42838733)
chr4 (341-386)||(23091539-23091584)
chr4 (349-386)||(39902481-39902518)
chr4 (328-412)||(34554483-34554567)
chr4 (321-377)||(53391934-53391990)
chr4 (339-371)||(27578952-27578984)
chr4 (282-386)||(45682211-45682315)
[»] chr1 (42 HSPs)
chr1 (184-418)||(20054082-20054316)
chr1 (184-418)||(20054538-20054772)
chr1 (184-418)||(20054994-20055228)
chr1 (184-418)||(20055450-20055684)
chr1 (184-418)||(20055906-20056140)
chr1 (184-418)||(20056362-20056596)
chr1 (184-418)||(20057265-20057499)
chr1 (183-418)||(16451935-16452170)
chr1 (183-418)||(16461088-16461323)
chr1 (184-418)||(20845663-20845897)
chr1 (184-418)||(20057721-20057955)
chr1 (184-385)||(38340816-38341017)
chr1 (184-418)||(52250116-52250350)
chr1 (184-418)||(43057525-43057759)
chr1 (188-418)||(12883438-12883668)
chr1 (184-418)||(51372876-51373110)
chr1 (184-418)||(20056818-20057043)
chr1 (184-418)||(43057067-43057300)
chr1 (183-417)||(30872953-30873188)
chr1 (273-386)||(35759642-35759755)
chr1 (273-395)||(35760939-35761061)
chr1 (273-418)||(20061193-20061338)
chr1 (237-386)||(50002741-50002890)
chr1 (184-395)||(50003100-50003311)
chr1 (300-418)||(2328341-2328459)
chr1 (184-386)||(31822697-31822899)
chr1 (272-418)||(50002287-50002433)
chr1 (269-386)||(2634919-2635036)
chr1 (273-418)||(46693737-46693883)
chr1 (184-417)||(7548003-7548234)
chr1 (183-384)||(10820501-10820702)
chr1 (306-415)||(16907266-16907375)
chr1 (329-418)||(20060342-20060431)
chr1 (273-386)||(23180729-23180842)
chr1 (323-418)||(12728040-12728136)
chr1 (312-401)||(16410742-16410831)
chr1 (306-381)||(46411173-46411248)
chr1 (331-412)||(2739578-2739660)
chr1 (319-412)||(2634511-2634604)
chr1 (323-395)||(16440604-16440676)
chr1 (343-395)||(31823109-31823161)
chr1 (183-216)||(9189351-9189384)
[»] chr2 (38 HSPs)
chr2 (183-418)||(25337999-25338234)
chr2 (184-418)||(33174868-33175102)
chr2 (183-418)||(25434058-25434293)
chr2 (183-418)||(29804591-29804826)
chr2 (184-418)||(41754199-41754433)
chr2 (184-418)||(8256436-8256670)
chr2 (183-415)||(18098883-18099116)
chr2 (184-418)||(16379302-16379537)
chr2 (184-417)||(27882929-27883162)
chr2 (184-418)||(33770920-33771145)
chr2 (181-386)||(15619805-15620010)
chr2 (187-418)||(1706955-1707185)
chr2 (184-414)||(33174415-33174643)
chr2 (188-384)||(18447954-18448150)
chr2 (184-418)||(1912434-1912668)
chr2 (213-418)||(16378877-16379081)
chr2 (273-386)||(30966233-30966346)
chr2 (273-418)||(24818325-24818470)
chr2 (273-418)||(30966689-30966834)
chr2 (181-386)||(15639647-15639846)
chr2 (184-418)||(38898914-38899148)
chr2 (272-397)||(1953153-1953278)
chr2 (273-412)||(29259628-29259767)
chr2 (273-386)||(5399851-5399964)
chr2 (276-417)||(20502023-20502165)
chr2 (184-314)||(18098667-18098798)
chr2 (283-386)||(30963754-30963857)
chr2 (272-418)||(11388187-11388331)
chr2 (321-415)||(13191021-13191115)
chr2 (326-415)||(8073944-8074033)
chr2 (293-418)||(11394554-11394677)
chr2 (321-384)||(30963299-30963362)
chr2 (269-381)||(30961922-30962042)
chr2 (285-418)||(83028-83161)
chr2 (255-384)||(16541966-16542095)
chr2 (325-377)||(8181394-8181446)
chr2 (325-386)||(36924456-36924519)
chr2 (331-385)||(26864851-26864905)
[»] chr3 (47 HSPs)
chr3 (183-386)||(39653073-39653276)
chr3 (184-418)||(11180036-11180269)
chr3 (184-418)||(28561656-28561890)
chr3 (186-418)||(50347658-50347890)
chr3 (184-386)||(16811291-16811493)
chr3 (184-418)||(13150101-13150334)
chr3 (197-418)||(32227223-32227444)
chr3 (182-386)||(14813857-14814061)
chr3 (189-386)||(16810840-16811037)
chr3 (184-418)||(37044944-37045179)
chr3 (195-412)||(30529608-30529825)
chr3 (183-418)||(32796937-32797171)
chr3 (244-418)||(25239079-25239253)
chr3 (187-418)||(25230250-25230482)
chr3 (187-418)||(25237837-25238069)
chr3 (230-418)||(32227457-32227644)
chr3 (184-418)||(2911005-2911239)
chr3 (211-417)||(20885120-20885325)
chr3 (211-413)||(25230712-25230914)
chr3 (211-413)||(25238299-25238501)
chr3 (273-418)||(31284278-31284423)
chr3 (237-418)||(39640900-39641081)
chr3 (273-416)||(25248110-25248253)
chr3 (273-384)||(8067279-8067390)
chr3 (273-416)||(41472300-41472442)
chr3 (230-384)||(14820110-14820264)
chr3 (184-414)||(25803010-25803240)
chr3 (304-418)||(32386736-32386850)
chr3 (273-418)||(27187332-27187477)
chr3 (274-386)||(7477191-7477303)
chr3 (274-386)||(7493881-7493993)
chr3 (323-418)||(13150556-13150651)
chr3 (323-418)||(25238686-25238781)
chr3 (326-418)||(4067362-4067454)
chr3 (321-386)||(29224371-29224436)
chr3 (184-281)||(39653530-39653627)
chr3 (309-381)||(47518358-47518430)
chr3 (283-386)||(25802582-25802685)
chr3 (183-317)||(13155307-13155438)
chr3 (183-264)||(970875-970956)
chr3 (273-377)||(41473996-41474100)
chr3 (309-395)||(31103985-31104071)
chr3 (342-384)||(3890046-3890088)
chr3 (342-384)||(3899868-3899910)
chr3 (184-228)||(25238863-25238907)
chr3 (319-386)||(26310023-26310090)
chr3 (273-333)||(12820643-12820703)
[»] scaffold0243 (1 HSPs)
scaffold0243 (184-418)||(1130-1364)
[»] chr7 (49 HSPs)
chr7 (184-418)||(34405593-34405827)
chr7 (184-418)||(2189054-2189288)
chr7 (185-418)||(36422163-36422396)
chr7 (182-386)||(29357490-29357693)
chr7 (184-418)||(6747600-6747834)
chr7 (184-384)||(43233323-43233523)
chr7 (230-418)||(2193212-2193400)
chr7 (184-418)||(679727-679960)
chr7 (181-374)||(26957603-26957796)
chr7 (184-415)||(2611657-2611888)
chr7 (192-418)||(35527123-35527348)
chr7 (184-418)||(42515455-42515688)
chr7 (211-418)||(28495791-28495998)
chr7 (184-418)||(35474123-35474357)
chr7 (273-418)||(2941759-2941904)
chr7 (273-418)||(18833285-18833430)
chr7 (273-418)||(42515091-42515236)
chr7 (273-418)||(9124958-9125103)
chr7 (273-418)||(13125138-13125283)
chr7 (272-415)||(6719079-6719222)
chr7 (273-383)||(11517426-11517535)
chr7 (240-418)||(28495610-28495788)
chr7 (182-358)||(3305374-3305550)
chr7 (184-316)||(10430673-10430805)
chr7 (274-418)||(36015413-36015557)
chr7 (238-418)||(46425705-46425885)
chr7 (184-413)||(29039027-29039248)
chr7 (273-384)||(5406624-5406735)
chr7 (183-317)||(2463551-2463685)
chr7 (323-418)||(2465782-2465877)
chr7 (300-418)||(2465950-2466068)
chr7 (237-386)||(22529269-22529418)
chr7 (276-384)||(25182363-25182471)
chr7 (283-364)||(13124757-13124838)
chr7 (269-418)||(31406586-31406735)
chr7 (291-381)||(11372468-11372558)
chr7 (324-418)||(26421307-26421401)
chr7 (321-386)||(31743858-31743923)
chr7 (303-415)||(1628745-1628854)
chr7 (300-418)||(26421762-26421880)
chr7 (184-366)||(16811900-16812074)
chr7 (272-386)||(9623206-9623320)
chr7 (323-412)||(16192368-16192457)
chr7 (305-374)||(6585639-6585708)
chr7 (321-371)||(2490086-2490136)
chr7 (305-378)||(33316759-33316832)
chr7 (184-228)||(2189510-2189554)
chr7 (184-410)||(37672064-37672296)
chr7 (301-417)||(11372926-11373042)
[»] scaffold0333 (2 HSPs)
scaffold0333 (182-418)||(4469-4705)
scaffold0333 (184-418)||(4926-5165)
[»] scaffold0168 (1 HSPs)
scaffold0168 (183-418)||(2651-2886)
[»] scaffold0088 (1 HSPs)
scaffold0088 (184-387)||(23583-23786)
[»] scaffold0002 (2 HSPs)
scaffold0002 (184-418)||(154668-154901)
scaffold0002 (183-317)||(151550-151681)
[»] scaffold0664 (1 HSPs)
scaffold0664 (186-409)||(3993-4207)
[»] scaffold0047 (3 HSPs)
scaffold0047 (211-418)||(17600-17807)
scaffold0047 (235-418)||(18137-18319)
scaffold0047 (184-280)||(17819-17916)
[»] scaffold0322 (2 HSPs)
scaffold0322 (274-418)||(18966-19110)
scaffold0322 (273-336)||(18205-18268)
[»] scaffold0499 (1 HSPs)
scaffold0499 (272-418)||(2053-2199)
[»] scaffold0024 (1 HSPs)
scaffold0024 (274-418)||(105720-105864)
[»] scaffold0007 (1 HSPs)
scaffold0007 (273-386)||(142308-142421)
[»] scaffold0040 (1 HSPs)
scaffold0040 (273-413)||(2217-2357)
[»] scaffold0020 (1 HSPs)
scaffold0020 (273-418)||(107465-107610)
[»] scaffold0018 (1 HSPs)
scaffold0018 (273-418)||(10299-10444)
[»] scaffold0005 (2 HSPs)
scaffold0005 (273-386)||(245085-245198)
scaffold0005 (285-418)||(245526-245659)
[»] scaffold0022 (2 HSPs)
scaffold0022 (273-386)||(162712-162825)
scaffold0022 (307-418)||(69817-69928)
[»] scaffold0557 (2 HSPs)
scaffold0557 (323-418)||(2154-2249)
scaffold0557 (184-317)||(660-793)
[»] scaffold0442 (1 HSPs)
scaffold0442 (184-317)||(2414-2548)
[»] scaffold0391 (1 HSPs)
scaffold0391 (327-382)||(14794-14849)
[»] scaffold0101 (1 HSPs)
scaffold0101 (327-385)||(45439-45497)
[»] scaffold0036 (1 HSPs)
scaffold0036 (338-415)||(26134-26211)
[»] scaffold0389 (1 HSPs)
scaffold0389 (360-418)||(13535-13593)


Alignment Details
Target: chr6 (Bit Score: 183; Significance: 9e-99; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 183; E-Value: 9e-99
Query Start/End: Original strand, 30 - 418
Target Start/End: Complemental strand, 14772115 - 14771721
Alignment:
Q  30 gtttgggtatttgttaatctttgtttattgttggtttatcatatcatcttgttttaaacttttggcgttctcttcgataaatctt-cactaggaaaaatg 128  Q
    ||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||    
T  14772115 gtttgggtatt-gttaatctttgtttactgttggtttatcagatcatcttgttttaaacttttgtcgttctcttcgatacatcttgcactaggaaaaatg 14772017  T
Q  129 gttactttata---atataattcattttgacttgttnnnnnnncc---agaatagaggcattgtaacacccaaggctgacgagggcgaggagtgatcgcc 222  Q
    |||  || ||    ||||||||  ||||||||||||        |   ||||||| |||||||||||||||| |||||||||||||  ||||||||||||    
T  14772016 gttgtttcatggtgatataatttgttttgacttgttaaaagaaaccctagaatagcggcattgtaacacccacggctgacgagggcagggagtgatcgcc 14771917  T
Q  223 agtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattg 322  Q
     ||||  |||| |||||||||||||||||||||||||||||  ||||| |||||||| ||||||||| ||||||||||| |||||| |||||||  | ||    
T  14771916 ggtgcgcaaggcacgacaatgagcgactcccgacagcttcttgatgaagcgaatcacgccggaatgagagggatcccgaagccgtgtaggtatgagactg 14771817  T
Q  323 catggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||| |||| ||| ||| |||||| ||||||||||||||||    
T  14771816 catggttgaaggaagacttataagaattgtttggtactacctatatcaacaagatccatattctttttggtaatctattccataagaactccacag 14771721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 184 - 386
Target Start/End: Original strand, 20850231 - 20850433
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||| |||| ||||||||||||| |||| ||||||||||| | ||| ||||||||||||    
T  20850231 tgtaacacccaaggctgacgagggcgaggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacaccg 20850330  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| |||| ||  |||||||||||||||||| | |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  20850331 gaatgagagggttcatgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgttttgtactacctatatcaacaagatgcatct 20850430  T
Q  384 tct 386  Q
    |||    
T  20850431 tct 20850433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 184 - 415
Target Start/End: Original strand, 21311881 - 21312112
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    |||||||||||||||||||||||||| | |||| ||||||||||| |||| || |||||||||||||||||| |||||||||| |||  ||||||||||     
T  21311881 tgtaacacccaaggctgacgagggcgggaagtggtcgccagtgcacaaggcacaacaatgagcgactcccgatagcttctaaaggaactgaatcacacca 21311980  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| |||| ||  ||||| |||||||||||  | |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  21311981 gaatgagagggttcatgaggctgtgcaggtatgagactgcatggttgaaggaaggcttataagaattgttaggtactacctatatcaacaagatgcatct 21312080  T
Q  384 tctctttagtagtctatttcataagaactcca 415  Q
    ||| ||| |||| | |||||||||||| ||||    
T  21312081 tctttttggtagcccatttcataagaaatcca 21312112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 186 - 418
Target Start/End: Original strand, 3652398 - 3652630
Alignment:
Q  186 taacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccgga 285  Q
    |||||||||||||||| ||||||| |||||| ||| | ||||| |||| ||||||||||||| |||||||||||||||| | ||| ||||||||| ||||    
T  3652398 taacacccaaggctgatgagggcggggagtggtcgtcggtgcacaaggcacgacaatgagcggctcccgacagcttctagaggaaccgaatcacatcgga 3652497  T
Q  286 atgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttc 385  Q
    |||| |||||||| ||||| ||| |||||||| | | |||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||||    
T  3652498 atgagagggatcctgaggctgtgtaggtatgggactacatggttgaaggaaggcttataagaattgtctgatactacctatatcaacaagatgcatcttc 3652597  T
Q  386 tctttagtagtctatttcataagaactccacag 418  Q
    | ||| |||||  ||| ||||||||||||||||    
T  3652598 tttttggtagttcattccataagaactccacag 3652630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 184 - 417
Target Start/End: Complemental strand, 2681452 - 2681219
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    |||||||||||||||||||||||||| |||||| ||||| || || |||| ||||||||||||| |||| ||||| ||||| | ||| ||||||||||||    
T  2681452 tgtaacacccaaggctgacgagggcggggagtggtcgccggtacacaaggcacgacaatgagcggctcctgacagtttctagaggaaccgaatcacaccg 2681353  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| |||| ||| ||||||||| |||| ||| | |||||||||||| |||  ||||||||||||||||||||||||| |||||||||||||||||||    
T  2681352 gaatgagagggttcctgaggccgtgtaggtttgggactgcatggttgaatgaagacttataagaattgtttggtactacccatatcaacaagatgcatct 2681253  T
Q  384 tctctttagtagtctatttcataagaactccaca 417  Q
    ||| ||  ||||   ||| |||||||||||||||    
T  2681252 tcttttcggtagctcattccataagaactccaca 2681219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 185 - 386
Target Start/End: Complemental strand, 23986552 - 23986351
Alignment:
Q  185 gtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccgg 284  Q
    |||| ||| |||||||||||||||| |||||| ||| | ||||| |||| | ||||||||||| |||||||||||||||| | ||| ||||||||| |||    
T  23986552 gtaatacctaaggctgacgagggcggggagtggtcgtcggtgcacaaggcatgacaatgagcggctcccgacagcttctagaggaaccgaatcacatcgg 23986453  T
Q  285 aatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatctt 384  Q
    ||||| |||||||| ||||||||| |||||||| | | |||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||    
T  23986452 aatgagagggatccggaggccgtgtaggtatgggactacatggttgaaggtaggcttataagaattgtttggtactacctatatgaacaagatgcatctt 23986353  T
Q  385 ct 386  Q
    ||    
T  23986352 ct 23986351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 184 - 418
Target Start/End: Complemental strand, 6331148 - 6330914
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    |||||||||||||||||||||||| | |||||| ||||| ||||| |||| | ||||||||||| ||||||||| |||||| |  |  ||||||||| ||    
T  6331148 tgtaacacccaaggctgacgagggtggggagtggtcgccggtgcacaaggcatgacaatgagcggctcccgacaacttctagacaagccgaatcacatcg 6331049  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| | |||||| ||||||||| |||||||  | | ||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||||    
T  6331048 gaatgagatggatcctgaggccgtgtaggtatgagactacatggttgaaggaagacttataagaattgtttggtactacctatatcaacaatatgcatct 6330949  T
Q  384 tctctttagtagtctatttcataagaactccacag 418  Q
    ||| ||  ||||   ||||||||||||||||||||    
T  6330948 tcttttcggtagctcatttcataagaactccacag 6330914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 184 - 416
Target Start/End: Complemental strand, 20896924 - 20896692
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    ||||||||||||||||||||||| ||  ||||| |||||  |||| |||| | ||||||||||| ||||||||| |||||| |  |  ||||||||| ||    
T  20896924 tgtaacacccaaggctgacgaggacggagagtggtcgccgttgcacaaggcatgacaatgagcggctcccgacaacttctagacaagccgaatcacatcg 20896825  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| ||||||||  |||||||| |||||||  | | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  20896824 gaatgagagggatccttaggccgtgtaggtatgagactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatct 20896725  T
Q  384 tctctttagtagtctatttcataagaactccac 416  Q
    ||| || |||||   ||| ||||||||||||||    
T  20896724 tcttttcagtagctcattccataagaactccac 20896692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 216 - 386
Target Start/End: Original strand, 27334103 - 27334273
Alignment:
Q  216 gatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatgatagggatcccgaggccgtgcaggtat 315  Q
    ||||||| ||||| |||| |||||||||| |||||||| ||||||| || | |||  |||||||||||||| || |||| ||| |||| |||||||||||    
T  27334103 gatcgccggtgcacaaggcacgacaatgaacgactcccaacagcttatagaggaactgaatcacaccggaacgagagggttcctgaggtcgtgcaggtat 27334202  T
Q  316 ggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttct 386  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  27334203 ggaactgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgaatcttct 27334273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 216 - 386
Target Start/End: Original strand, 27394843 - 27395013
Alignment:
Q  216 gatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatgatagggatcccgaggccgtgcaggtat 315  Q
    ||||||| ||||| |||| |||||||||| |||||||| ||||||| || | |||  |||||||||||||| || |||| ||| |||| |||||||||||    
T  27394843 gatcgccggtgcacaaggcacgacaatgaacgactcccaacagcttatagaggaactgaatcacaccggaacgagagggttcctgaggtcgtgcaggtat 27394942  T
Q  316 ggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttct 386  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  27394943 ggaactgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgaatcttct 27395013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 183 - 376
Target Start/End: Complemental strand, 2720801 - 2720608
Alignment:
Q  183 ttgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacacc 282  Q
    |||||||||| |||||||||||||||| |||||| ||||| ||||| |||  |||||||||||||||| | ||||||||||| | ||| | ||||| |||    
T  2720801 ttgtaacacctaaggctgacgagggcggggagtggtcgccggtgcacaagtcacgacaatgagcgacttcggacagcttctagacgaaccaaatcatacc 2720702  T
Q  283 ggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaaga 376  Q
    ||||||| ||||||||| ||| ||||||||||||  | ||||||||||||||||  |||||||||||||||||||||||||||||| |||||||    
T  2720701 ggaatgagagggatcccaaggtcgtgcaggtatgagactgcatggttgaaggaagacttataagaattgtttggtactacctatattaacaaga 2720608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 184 - 418
Target Start/End: Complemental strand, 2891073 - 2890841
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    |||||||||||||||||||||||||  ||| || | ||| ||||| |||  ||||||||||||| |||| ||||| ||||| | |||||||||||||       
T  2891073 tgtaacacccaaggctgacgagggcagggactggttgccggtgcacaagccacgacaatgagcggctcctgacag-ttctagaggaatcgaatcacatta 2890975  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| ||| ||||||||||||||||||||||| | |||||||||||||||| | |||||||||||||| || |||||||||||||| ||||||| |||    
T  2890974 gaatgagagg-atcccgaggccgtgcaggtatgggactgcatggttgaaggaaggtttataagaattgttagggactacctatatcaaaaagatgcttct 2890876  T
Q  384 tctctttagtagtctatttcataagaactccacag 418  Q
    ||| || ||||| | ||| ||||||||||||||||    
T  2890875 tcttttcagtagcccattccataagaactccacag 2890841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 184 - 418
Target Start/End: Original strand, 11062196 - 11062429
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    |||||| ||||||||| |||| |||| |||||| || || ||||| |||| ||||||||||||| |||||||||| ||||| | ||| ||||||||| ||    
T  11062196 tgtaacgcccaaggcttacgaaggcggggagtggtcaccggtgcacaaggcacgacaatgagcggctcccgacagtttctagaggaaccgaatcacatcg 11062295  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
      |||| ||| |||| ||||| ||| ||||||| || | |||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||    
T  11062296 acatgagagg-atcctgaggctgtgtaggtatgaaactacatggttgaaggaaggcttataagaagtgttttgtactacctatatcaacaagatgcatct 11062394  T
Q  384 tctctttagtagtctatttcataagaactccacag 418  Q
    ||| ||| |||| | ||| ||||||||||||||||    
T  11062395 tctttttggtagcccattccataagaactccacag 11062429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 186 - 417
Target Start/End: Original strand, 17851286 - 17851517
Alignment:
Q  186 taacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccgga 285  Q
    ||||||||||||||  |||||||| | |||| ||||| ||||| |||| |||| ||| |||| ||   |||| |||||| | ||| ||||||||||||||    
T  17851286 taacacccaaggctaccgagggcgggaagtgttcgccggtgcacaaggcacgataattagcggctttagacaacttctagacgaaccgaatcacaccgga 17851385  T
Q  286 atgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttc 385  Q
    |||| |||||||||||||||||||| |||||| | ||||||||| || ||| ||||||||||  ||||||||||||||| ||||||||||||||||||||    
T  17851386 atgagagggatcccgaggccgtgcaagtatgggactgcatggttaaaagaaggcttataagatatgtttggtactacctttatcaacaagatgcatcttc 17851485  T
Q  386 tctttagtagtctatttcataagaactccaca 417  Q
    | ||| |||| | |||  ||||||||||||||    
T  17851486 tttttggtagcccattctataagaactccaca 17851517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 274 - 418
Target Start/End: Complemental strand, 17027677 - 17027533
Alignment:
Q  274 aatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaaca 373  Q
    ||||||| |||||||| |||||||| |||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  17027677 aatcacatcggaatgagagggatccagaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaaca 17027578  T
Q  374 agatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    |||| |||||||| ||  ||||   ||||||||||||||||||||    
T  17027577 agattcatcttcttttcggtagctcatttcataagaactccacag 17027533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 273 - 418
Target Start/End: Original strand, 7911877 - 7912022
Alignment:
Q  273 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 372  Q
    |||||||| |||||||| ||||||| ||||||||||||||||| | | ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  7911877 gaatcacatcggaatgagagggatctcgaggccgtgcaggtataggactgcatggttgaaggaaaacttataagaattgtttggtactacctatatcaac 7911976  T
Q  373 aagatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    |||||||||||||| ||  ||||   ||| ||||||||||||||||    
T  7911977 aagatgcatcttcttttcggtagctcattccataagaactccacag 7912022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 184 - 417
Target Start/End: Complemental strand, 20126418 - 20126185
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    ||||||||||||||| |||||||||| |||||| ||||| ||||| |||| | ||||||||||| |||| |||| |||||| |  |   |||||||| ||    
T  20126418 tgtaacacccaaggccgacgagggcggggagtggtcgccggtgcacaaggcatgacaatgagcggctcctgacaacttctagacaagctgaatcacatcg 20126319  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| ||||||||  |||| ||| |||||||  | | |||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||||    
T  20126318 gaatgagagggatcctaaggctgtgtaggtatgagactacatggttgaaggaaggcttataagaatggtttgatactacctatatcaacaagatgcatct 20126219  T
Q  384 tctctttagtagtctatttcataagaactccaca 417  Q
    ||| ||| ||||   ||| |||||||| ||||||    
T  20126218 tctttttggtagcacattccataagaattccaca 20126185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 182 - 418
Target Start/End: Original strand, 17850826 - 17851062
Alignment:
Q  182 attgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacac 281  Q
    ||||||| || ||||||| || |||||| | |||| ||||| ||||| |||| |||||||| |||| || |||||| |||||| | ||| ||||||||||    
T  17850826 attgtaatactcaaggctaacaagggcgggaagtggtcgccggtgcacaaggcacgacaattagcggcttccgacaacttctagacgaaccgaatcacac 17850925  T
Q  282 cggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcat 381  Q
    |||||||| |||||||| |||| |||||| |||||| | ||||||||| || ||| ||| ||||||  ||||||||||||||| ||||||||||||||||    
T  17850926 cggaatgagagggatcctgaggtcgtgcaagtatgggactgcatggttaaaagaatgctgataagatatgtttggtactacctttatcaacaagatgcat 17851025  T
Q  382 cttctctttagtagtctatttcataagaactccacag 418  Q
    ||||| | | |||| | |||  |||||||||||||||    
T  17851026 cttctttctggtagcccattctataagaactccacag 17851062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 184 - 346
Target Start/End: Original strand, 3652889 - 3653051
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    ||||||||||||| |||||||||||| |||||| ||||| ||||| |||| ||||||||||||| |||||||||||||||| ||||| ||| ||||| ||    
T  3652889 tgtaacacccaagactgacgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcccgacagcttctagatgaaccgactcacatcg 3652988  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataag 346  Q
    |||||| |||||||| ||||| ||| |||||||| | |||||||||||| ||| |||||||||    
T  3652989 gaatgagagggatcctgaggctgtgtaggtatgggactgcatggttgaacgaaggcttataag 3653051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 185 - 417
Target Start/End: Original strand, 23776352 - 23776584
Alignment:
Q  185 gtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccgg 284  Q
    |||||||| || ||||||||||  |  ||||| |||||  || | |||||||||||||||||| || ||||||||||||| | |||  ||||||| ||||    
T  23776352 gtaacaccgaaagctgacgaggatggagagtggtcgccgatgtacaaggtacgacaatgagcggcttccgacagcttctagaggaactgaatcacgccgg 23776451  T
Q  285 aatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatctt 384  Q
    ||||| ||| |||| |||||| || |||||||| | | ||||||||||||||  ||||||||||| || |||||||||||||||||||||||||||||||    
T  23776452 aatgagaggtatcctgaggccttgtaggtatgggactacatggttgaaggaagacttataagaatcgtctggtactacctatatcaacaagatgcatctt 23776551  T
Q  385 ctctttagtagtctatttcataagaactccaca 417  Q
    || ||  ||||   |||||||||||||| ||||    
T  23776552 cttttcggtagctcatttcataagaacttcaca 23776584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 273 - 415
Target Start/End: Original strand, 7912309 - 7912451
Alignment:
Q  273 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 372  Q
    |||||||| |||||||| ||||||| ||||||||||||||||||| | ||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  7912309 gaatcacatcggaatgagagggatctcgaggccgtgcaggtatgggactgcatggttgaaggaaaacttatatgaattgtttggtactacctatatcaac 7912408  T
Q  373 aagatgcatcttctctttagtagtctatttcataagaactcca 415  Q
    ||||||||| |||| ||  ||||   ||| |||||||||||||    
T  7912409 aagatgcattttcttttcggtagctcattccataagaactcca 7912451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 181 - 418
Target Start/End: Complemental strand, 33775243 - 33775004
Alignment:
Q  181 cattgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcaca 280  Q
    ||||||||||||||||| ||| |||| |  | |||| ||| | ||||| |||| |||| |||||||  ||||| |||| ||||| |  || |||||||||    
T  33775243 cattgtaacacccaaggttgatgaggacaggtagtggtcgtcggtgcacaaggcacgataatgagcagctcccaacagtttctacacaaaacgaatcaca 33775144  T
Q  281 ccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaaca--agatg 378  Q
    | ||||||| || |||| |||||||||||| |||||  |  ||||||||||||||| | ||||||||||||| |||| |||||||||||||||  |||||    
T  33775143 ctggaatgagagtgatcgcgaggccgtgcaagtatgtgaccgcatggttgaaggaaggattataagaattgtctggtgctacctatatcaacaagagatg 33775044  T
Q  379 catcttctctttagtagtctatttcataagaactccacag 418  Q
    |||||||| |||  ||||| ||| ||||||||||||||||    
T  33775043 catcttctttttgatagtccattccataagaactccacag 33775004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 272 - 386
Target Start/End: Complemental strand, 9440457 - 9440343
Alignment:
Q  272 cgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaa 371  Q
    ||||||||| |||||||| |||||||| || | ||||||||||||||| |||||||||||| |||||||||||||||||||| |||||||| ||||||||    
T  9440457 cgaatcacatcggaatgagagggatcctgaagtcgtgcaggtatggaactgcatggttgaatgaaagcttataagaattgttcggtactacttatatcaa 9440358  T
Q  372 caagatgcatcttct 386  Q
    |||||||||| ||||    
T  9440357 caagatgcattttct 9440343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 273 - 418
Target Start/End: Original strand, 13492788 - 13492933
Alignment:
Q  273 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 372  Q
    |||||| | |||||||| | |||||| ||||| |||||||||||  | |||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  13492788 gaatcatatcggaatgagaaggatcctgaggctgtgcaggtatgagactgcatggttgaaggaaggcttataataattgtttggtactacctatatcaac 13492887  T
Q  373 aagatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    |||||||||||||| ||  ||||   ||| ||||||||||||||||    
T  13492888 aagatgcatcttcttttcggtagctcattccataagaactccacag 13492933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 183 - 386
Target Start/End: Original strand, 21311423 - 21311627
Alignment:
Q  183 ttgtaacacccaaggctgacgagggcg-aggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacac 281  Q
    |||||||||||| ||||||| |||||  ||||||| ||||| ||||| |||| ||||||||||| |  || ||| |||||||| |  || |||||||||     
T  21311423 ttgtaacacccacggctgacaagggcataggagtggtcgccggtgcacaaggaacgacaatgagaggttctcgaaagcttctagagaaaacgaatcacat 21311522  T
Q  282 cggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcat 381  Q
    |||||||| |||| ||  |||||||| || |||||| | ||||||||||||||||  |||||||||||||||||||| |||||| || |||||||| |||    
T  21311523 cggaatgagagggttcatgaggccgtacaagtatgggactgcatggttgaaggaagccttataagaattgtttggtattacctagataaacaagatccat 21311622  T
Q  382 cttct 386  Q
    |||||    
T  21311623 cttct 21311627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 184 - 418
Target Start/End: Original strand, 15929492 - 15929726
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    ||||| |||||||| ||||||||||  || ||| |||   |||||||||| | ||||||||||| |||| |||| |||||| ||||||||||||||| |     
T  15929492 tgtaatacccaaggatgacgagggccgggtgtggtcgttggtgcataaggcatgacaatgagcggctccggacaacttctagatgaatcgaatcacatca 15929591  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||| | || |||||  | ||| || | |||| | | | |||||||||| ||| ||||||||||||| ||||||||||||||||||||||| ||||||||    
T  15929592 gaataagagagatcctaatgccttgtatgtattggactacatggttgaatgaaggcttataagaattatttggtactacctatatcaacaaaatgcatct 15929691  T
Q  384 tctctttagtagtctatttcataagaactccacag 418  Q
    ||| ||  ||||   ||| ||||||||||||||||    
T  15929692 tcttttcggtagctcattccataagaactccacag 15929726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 274 - 386
Target Start/End: Complemental strand, 13191659 - 13191547
Alignment:
Q  274 aatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaaca 373  Q
    ||||||| |||||||| ||||||||  || |  || |||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  13191659 aatcacatcggaatgagagggatcctaagactatgtaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaaca 13191560  T
Q  374 agatgcatcttct 386  Q
    |||||||||||||    
T  13191559 agatgcatcttct 13191547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 273 - 377
Target Start/End: Complemental strand, 17731260 - 17731156
Alignment:
Q  273 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 372  Q
    |||||||| |||||||| |||||||| |||||||| ||||||||| | ||||||||| ||||||  ||||||||||||||||||||||||||||||||||    
T  17731260 gaatcacatcggaatgagagggatcctgaggccgttcaggtatgggactgcatggttaaaggaagacttataagaattgtttggtactacctatatcaac 17731161  T
Q  373 aagat 377  Q
    |||||    
T  17731160 aagat 17731156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 273 - 418
Target Start/End: Original strand, 16519967 - 16520112
Alignment:
Q  273 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 372  Q
    |||||||| |||||||| |||||||| ||||| ||| |||||||  | | |||||| ||||||| |||||| ||| ||||||||||||||||||||||||    
T  16519967 gaatcacatcggaatgagagggatcctgaggctgtgtaggtatgagactacatggtcgaaggaaggcttatgagatttgtttggtactacctatatcaac 16520066  T
Q  373 aagatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    |||||||||||||| ||  ||||   ||| ||||||||||||||||    
T  16520067 aagatgcatcttcttttcggtagctcattccataagaactccacag 16520112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 252 - 384
Target Start/End: Complemental strand, 31821860 - 31821728
Alignment:
Q  252 ccgacagcttctaaatgaatcgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattg 351  Q
    ||||||||||||| |  || ||||||||| |||||||| |||||||  |||||| || |||||||  | | |||||||||||||| |||||||||||||     
T  31821860 ccgacagcttctagagaaaccgaatcacatcggaatgagagggatcatgaggccatgtaggtatgagactacatggttgaaggaatgcttataagaatta 31821761  T
Q  352 tttggtactacctatatcaacaagatgcatctt 384  Q
    |||||||||| ||||||||||||||||||||||    
T  31821760 tttggtactaactatatcaacaagatgcatctt 31821728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 186 - 386
Target Start/End: Original strand, 15929111 - 15929311
Alignment:
Q  186 taacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccgga 285  Q
    |||||||||||||||| ||||| | |||||| ||||   || | |||| | |||||||||||||| | || | |||||| || || ||||||||| |  |    
T  15929111 taacacccaaggctgatgagggtggggagtggtcgctgatgtacaaggcatgacaatgagcgacttcagatatcttctagattaaccgaatcacaacata 15929210  T
Q  286 atgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttc 385  Q
    || | | |||||| ||||||||  |||||||  | | || |||||||| |||||||||||||||||||||||| | |||||||||| ||||||||| |||    
T  15929211 ataagatggatcctgaggccgtttaggtatgagactacaaggttgaagaaaagcttataagaattgtttggtaatgcctatatcaataagatgcatattc 15929310  T
Q  386 t 386  Q
    |    
T  15929311 t 15929311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 199 - 415
Target Start/End: Original strand, 20735621 - 20735836
Alignment:
Q  199 tgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatgatagggatcc 298  Q
    |||||||||||||| ||||||||| ||||||||||   |||||||||||||||| |||| ||| | |   || |  |||||| |  ||||| |||||||     
T  20735621 tgacgagggcgaggggtgatcgccggtgcataaggcttgacaatgagcgactcctgacaactt-tcaggcaaccagatcacatcataatgagagggatct 20735719  T
Q  299 cgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtct 398  Q
     ||| | ||| |||||||  | | |||| ||| ||||| |||||||||||||||||| |||||| ||||||||||||||||||||||| ||  ||||||     
T  20735720 tgagactgtgtaggtatgtgactacatgattgtaggaaggcttataagaattgtttgatactacttatatcaacaagatgcatcttcttttcggtagtcc 20735819  T
Q  399 atttcataagaactcca 415  Q
    |||  |||| |||||||    
T  20735820 attctataaaaactcca 20735836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 273 - 363
Target Start/End: Complemental strand, 9440575 - 9440485
Alignment:
Q  273 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacc 363  Q
    |||||||| |||||||| |||||||| || | ||||||||||||| | | |||||||||| ||| ||||||||||||||||||||||||||    
T  9440575 gaatcacatcggaatgagagggatcctgaagtcgtgcaggtatgggacttcatggttgaatgaaggcttataagaattgtttggtactacc 9440485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 305 - 395
Target Start/End: Complemental strand, 9440972 - 9440882
Alignment:
Q  305 cgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtag 395  Q
    |||||||| |||||| | |||||||||||||| ||||||||||||| ||||||||||| | |||||||||||||||| |||| || |||||    
T  9440972 cgtgcaggcatggaactacatggttgaaggaatgcttataagaattctttggtactacttttatcaacaagatgcattttcttttcagtag 9440882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 305 - 394
Target Start/End: Original strand, 32292916 - 32293005
Alignment:
Q  305 cgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagta 394  Q
    ||||||||||||  | |||||||||||| ||| |||||||||||||||||||||||||||||| |||||| || |||||| | |||||||    
T  32292916 cgtgcaggtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaaaatacatcttgtttttagta 32293005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 274 - 418
Target Start/End: Original strand, 9352062 - 9352206
Alignment:
Q  274 aatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaaca 373  Q
    ||||||| || ||||| |||||||| ||||| ||| |||||||  | | |||||| ||||| |  ||||||| | |||||||||||||||||||| ||||    
T  9352062 aatcacatcgaaatgagagggatcctgaggctgtgtaggtatgagactacatggtcgaagggagacttataatatttgtttggtactacctatataaaca 9352161  T
Q  374 agatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    ||||||||||||| ||  ||||   ||| ||||||||||||||||    
T  9352162 agatgcatcttcttttcggtagctcattccataagaactccacag 9352206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 338 - 418
Target Start/End: Original strand, 13492396 - 13492476
Alignment:
Q  338 gcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||| ||  ||||   ||| ||||||||||||||||    
T  13492396 gcttataagaattgtttgatattacctatatcaacaagatgcatcttcttttcggtagctaattccataagaactccacag 13492476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 328 - 384
Target Start/End: Complemental strand, 28065930 - 28065874
Alignment:
Q  328 ttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatctt 384  Q
    ||||| |||||||||||||||||||||||||||| || |||||||||||||||||||    
T  28065930 ttgaatgaaagcttataagaattgtttggtactatctctatcaacaagatgcatctt 28065874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 272 - 418
Target Start/End: Original strand, 12194328 - 12194472
Alignment:
Q  272 cgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaa 371  Q
    |||||||||  ||||||| ||| |||| ||| |||||||| |||| || |||||| |||||| ||  ||||||| | || ||||| |||| |||||||||    
T  12194328 cgaatcacattggaatgagaggaatcctgagaccgtgcagatatg-aactgcatgattgaagaaagacttataa-atttttttggcactatctatatcaa 12194425  T
Q  372 caagatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    ||||||||||||||| |||  || |  ||| ||||||||||||||||    
T  12194426 caagatgcatcttcttttttataattcattccataagaactccacag 12194472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 415
Target Start/End: Original strand, 17205335 - 17205479
Alignment:
Q  270 atcgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatc 369  Q
    ||||||||||| |||||| | ||||||   ||| || ||  |||||| || |||||| ||||| |||   ||||||||||||||||||||||||| || |    
T  17205335 atcgaatcacatcggaattagagggattttgagaccatggtggtatgaaactgcatgattgaatgaagaattataagaattgtttggtactacctttacc 17205434  T
Q  370 aacaagatgcatcttctctttagtagtctatttcataagaactcca 415  Q
    |||||||| |||||| | ||| |||| | ||| |||||||||||||    
T  17205435 aacaagattcatcttgt-tttggtagcccattccataagaactcca 17205479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 305 - 382
Target Start/End: Original strand, 28582995 - 28583071
Alignment:
Q  305 cgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatc 382  Q
    ||||||||||| || ||| ||||||||| ||| ||||||||||||| |||| ||| | ||||||||||||||||||||    
T  28582995 cgtgcaggtataga-ttgtatggttgaatgaaggcttataagaattatttgatacgatctatatcaacaagatgcatc 28583071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 323 - 418
Target Start/End: Original strand, 1991602 - 1991697
Alignment:
Q  323 catggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    |||||||| | ||| ||||| ||||||||||||||| ||| ||| | ||||||||||||||||| ||  ||||   |||||||||||||| |||||    
T  1991602 catggttggaagaaggcttacaagaattgtttggtattacatatctaaacaagatgcatcttcttttcggtagctcatttcataagaacttcacag 1991697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 323 - 386
Target Start/End: Original strand, 20732627 - 20732690
Alignment:
Q  323 catggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttct 386  Q
    |||||||| ||||| ||||||||||||| ||||||||||||||||| || || |||||| ||||    
T  20732627 catggttgtaggaaggcttataagaattatttggtactacctatattaataatatgcatattct 20732690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 323 - 359
Target Start/End: Original strand, 9441099 - 9441135
Alignment:
Q  323 catggttgaaggaaagcttataagaattgtttggtac 359  Q
    |||| ||||||||||||||||||||||||||||||||    
T  9441099 catgattgaaggaaagcttataagaattgtttggtac 9441135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 384
Target Start/End: Complemental strand, 3885186 - 3885123
Alignment:
Q  321 tgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatctt 384  Q
    ||||| |||||||||| ||||| ||||||||||||||||||| ||||  ||||| || ||||||    
T  3885186 tgcatagttgaaggaatgcttaaaagaattgtttggtactacatatactaacaaaatacatctt 3885123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 147; Significance: 3e-77; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 184 - 418
Target Start/End: Original strand, 10844793 - 10845027
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    |||||||||||||||||||||||||| |||||| ||||| ||||| |||| ||||||||||||| |||| ||||||||||| | ||| ||||||||||||    
T  10844793 tgtaacacccaaggctgacgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacaccg 10844892  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| |||| ||| |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10844893 gaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 10844992  T
Q  384 tctctttagtagtctatttcataagaactccacag 418  Q
    ||| ||  ||||   ||| ||||||||||||||||    
T  10844993 tcttttcggtagctcattccataagaactccacag 10845027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 184 - 418
Target Start/End: Original strand, 22026289 - 22026523
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||| |||| | ||||||||||| |||| ||||||||||| | ||| ||||||||||||    
T  22026289 tgtaacacccaaggctgacgagggcgaggagtggtcgccggtgcacaaggcatgacaatgagcggctcctgacagcttctagaggaaccgaatcacaccg 22026388  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| |||| ||  |||||||||||||||||| | |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  22026389 gaatgagagggttcgtgaggccgtgcaggtatgggactgcatggttgaatgaaggcttataagaattgtttggtactacctatatcaacaagatgcatct 22026488  T
Q  384 tctctttagtagtctatttcataagaactccacag 418  Q
    ||| ||  ||||   ||| ||||||||||||||||    
T  22026489 tcttttcggtagctcattccataagaactccacag 22026523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 184 - 418
Target Start/End: Original strand, 27925809 - 27926043
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    ||||||||||||||||||||||| || |||||| ||||  ||||| |||| ||||||||||||| |||| ||||||||||| | ||| ||||||||||||    
T  27925809 tgtaacacccaaggctgacgaggacggggagtggtcgctggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacaccg 27925908  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| |||| ||| |||||||||||||||||| | |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  27925909 gaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggattataagaattgtttggtactacctatatcaacaagatgcatct 27926008  T
Q  384 tctctttagtagtctatttcataagaactccacag 418  Q
    ||| ||  ||||   ||||||||||||||||||||    
T  27926009 tcttttcggtagctcatttcataagaactccacag 27926043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 184 - 418
Target Start/End: Original strand, 32292307 - 32292541
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    |||||||||||||||||||||||||| |||||||||||| ||||| |||| ||||||||||||| ||||||| || ||||| | ||| ||||||||||||    
T  32292307 tgtaacacccaaggctgacgagggcggggagtgatcgccggtgcacaaggcacgacaatgagcggctcccgatagtttctagaggaaccgaatcacaccg 32292406  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| |||| ||| ||||||||||| |||||| | |||||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||    
T  32292407 gaatgagagggttcctgaggccgtgcaagtatgggactgcatggttgaaggaatgcttataagaattgtttggtactatctatatcaacaagttgcatct 32292506  T
Q  384 tctctttagtagtctatttcataagaactccacag 418  Q
    ||| |||  ||| | ||| ||||||||||||||||    
T  32292507 tctttttgctagcccattccataagaactccacag 32292541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 183 - 418
Target Start/End: Complemental strand, 8080579 - 8080344
Alignment:
Q  183 ttgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacacc 282  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||| |||| ||||||||||||| |||   |||||||||| | |||  |||||||| |    
T  8080579 ttgtaacacccaaggctgacgagggcgaggagtggtcgccggtgcacaaggcacgacaatgagcggctcttaacagcttctagaggaactgaatcacatc 8080480  T
Q  283 ggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatc 382  Q
    ||||||| |||||||| || |||||| |||||||| | | |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  8080479 ggaatgagagggatcctgaagccgtgtaggtatgggactacatggttgaaggaaagctgataagaattgtttggtactacctatatcaacaagatgcatt 8080380  T
Q  383 ttctctttagtagtctatttcataagaactccacag 418  Q
    |||| ||| |||| | ||| |||||||||| |||||    
T  8080379 ttctttttggtagcccattccataagaacttcacag 8080344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 184 - 386
Target Start/End: Complemental strand, 22549231 - 22549029
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    |||||||||||||||||||||||||| |||||| ||||| ||||| |||| ||||||||||||| |||| ||||||||||| | ||| ||||||||||||    
T  22549231 tgtaacacccaaggctgacgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacaccg 22549132  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| |||  ||| ||||| |||||||||||  | ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  22549131 gaatgagaggcttcctgaggctgtgcaggtatgtgactgcatggttgaaggaagacttataagaattgtttggtactacctatatcaacaagatgcatct 22549032  T
Q  384 tct 386  Q
    |||    
T  22549031 tct 22549029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 183 - 418
Target Start/End: Complemental strand, 12827491 - 12827256
Alignment:
Q  183 ttgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacacc 282  Q
    ||||||||||||||||||||||||| | |||||||||||| ||||| |||| ||||||||||||| |||| ||| ||||||| | ||| |||||||| ||    
T  12827491 ttgtaacacccaaggctgacgagggtggggagtgatcgccggtgcacaaggcacgacaatgagcggctcctgactgcttctagaagaaccgaatcacgcc 12827392  T
Q  283 ggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatc 382  Q
    ||||||| |||||||| |||||| || |||||||| | | | |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  12827391 ggaatgagagggatcctgaggccttgtaggtatgggactacttggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatc 12827292  T
Q  383 ttctctttagtagtctatttcataagaactccacag 418  Q
    |||| ||  ||||   ||| ||||||||||||||||    
T  12827291 ttcttttcggtagctcattccataagaactccacag 12827256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 183 - 386
Target Start/End: Complemental strand, 41659341 - 41659139
Alignment:
Q  183 ttgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacacc 282  Q
    |||||||||| |||||||||||||||| |||||| ||||| ||||| |||  ||||||||||| | |||||||||||||||| | ||| |||||||||||    
T  41659341 ttgtaacacctaaggctgacgagggcggggagtggtcgccggtgcacaagc-acgacaatgagtggctcccgacagcttctagaggaaccgaatcacacc 41659243  T
Q  283 ggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatc 382  Q
    ||||||| |||| ||| || | ||||||||||||| | ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  41659242 ggaatgagagggttcctgatgtcgtgcaggtatgggactgcatggttgaaggaagacttataagaattgtttggtactacctatatcaacaagatgcatc 41659143  T
Q  383 ttct 386  Q
    ||||    
T  41659142 ttct 41659139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 184 - 418
Target Start/End: Complemental strand, 6465146 - 6464912
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    ||||||||||| | ||||||||||||||||||| ||||| ||||| |||| |||| |||||||| ||||| ||| |||||| |  ||||||||||||  |    
T  6465146 tgtaacacccacgtctgacgagggcgaggagtggtcgccggtgcacaaggcacgataatgagcggctcccaacaacttctagagtaatcgaatcacattg 6465047  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| ||| |||  ||||||||| |||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |    
T  6465046 gaatgagaggaatcatgaggccgtgtaggtatggaactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcattt 6464947  T
Q  384 tctctttagtagtctatttcataagaactccacag 418  Q
    ||| ||| ||||   ||| ||||| ||||||||||    
T  6464946 tctttttggtagctcattccataacaactccacag 6464912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 184 - 386
Target Start/End: Complemental strand, 22548785 - 22548583
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    |||||||||||||||||| ||||| | |||||| ||||||||||| |||| || |||||||||| |||| ||||||||||| | ||| | ||||||||||    
T  22548785 tgtaacacccaaggctgatgagggtggggagtggtcgccagtgcacaaggcactacaatgagcggctcctgacagcttctagaggaacctaatcacaccg 22548686  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| |||| ||| ||||| |||||||||||  | ||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||    
T  22548685 gaatgagagggttcctgaggctgtgcaggtatgtgactgcatggttgaaggaagttttataagaattgtttggtactacctatatcaacaagatgcatct 22548586  T
Q  384 tct 386  Q
    |||    
T  22548585 tct 22548583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 184 - 418
Target Start/End: Original strand, 28453249 - 28453482
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    |||||||||||||||||||||||||| |||||| | ||| ||||| |||| ||||||||||||| ||||||||| ||| || |||| | |||||||||||    
T  28453249 tgtaacacccaaggctgacgagggcggggagtggttgccggtgcacaaggcacgacaatgagcggctcccgacaacttttagatgact-gaatcacaccg 28453347  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| ||||||||||||| ||||||||||||  | | |||||||||| |||| ||||||||||||||||  |||||||||||| ||||||||||||||    
T  28453348 gaatgagagggatcccgaggtcgtgcaggtatgagacttcatggttgaaagaaaacttataagaattgttttatactacctatattaacaagatgcatct 28453447  T
Q  384 tctctttagtagtctatttcataagaactccacag 418  Q
    ||| | | |||| | ||| ||||||||||| ||||    
T  28453448 tctttatggtagcccattccataagaactctacag 28453482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 184 - 417
Target Start/End: Complemental strand, 33852493 - 33852261
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    |||||||||||||||||||||||||| | |||| ||||| ||||| |||| ||||||||||||| ||||||| | |||| | | |||  ||||||||||     
T  33852493 tgtaacacccaaggctgacgagggcgtg-agtggtcgccggtgcacaaggcacgacaatgagcggctcccgataacttcaagaggaactgaatcacacca 33852395  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| |||||||||||| |||||||||||||  | || |||||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||    
T  33852394 gaatgagagggatcccgagaccgtgcaggtatgagactgtatggttgaaggaaaacttataagaattgtttggtactacctatattaacaagatgtatct 33852295  T
Q  384 tctctttagtagtctatttcataagaactccaca 417  Q
    ||| ||| |||| | ||| |||||||||| ||||    
T  33852294 tctttttggtagcccattccataagaacttcaca 33852261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 182 - 384
Target Start/End: Complemental strand, 27022576 - 27022374
Alignment:
Q  182 attgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacac 281  Q
    ||||||| ||||||||||||||||| || |||||| ||||| ||||| |||| ||||||||||||| |||||||||||||||| | ||  |||||||||     
T  27022576 attgtaatacccaaggctgacgaggacggggagtggtcgccggtgcacaaggcacgacaatgagcggctcccgacagcttctagaggagccgaatcacat 27022477  T
Q  282 cggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcat 381  Q
    |||||||| |||||||  |||||| || |||||||| | | |||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  27022476 cggaatgagagggatcttgaggccatgtaggtatgggactacatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaacatgcat 27022377  T
Q  382 ctt 384  Q
    |||    
T  27022376 ctt 27022374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 184 - 386
Target Start/End: Complemental strand, 28375290 - 28375088
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    ||||||| |||| ||| ||||||||   ||||| ||| | ||||| |||| |||||||| |||| |||||||||||||||| | ||| |||||||||||     
T  28375290 tgtaacaaccaaagctaacgagggcagagagtggtcgtcggtgcacaaggcacgacaattagcggctcccgacagcttctagacgaaacgaatcacacca 28375191  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
     ||||| |||||||| |||||||||||||||||  | |||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  28375190 taatgagagggatcctgaggccgtgcaggtatgagactgcatgattgaaggaaggcttataagaattgtttggtactacctacatcaacaagatgcatct 28375091  T
Q  384 tct 386  Q
    |||    
T  28375090 tct 28375088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 184 - 418
Target Start/End: Complemental strand, 22840765 - 22840531
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    ||||||||||||||||||| |||||| |||||| ||||| |||||||||  |||| |||||||| ||||||| | |||||| |  ||  |||||||| ||    
T  22840765 tgtaacacccaaggctgacaagggcggggagtggtcgccggtgcataagacacgataatgagcggctcccgataacttctagagtaactgaatcacatcg 22840666  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| || ||||| |||||  || |||||||  | | |||||| ||| |||  ||||||||||||||||||||||| |||||||||||||||||||||    
T  22840665 gaatgagagagatcctgaggctttgtaggtatgagactacatggtcgaatgaagacttataagaattgtttggtactatctatatcaacaagatgcatct 22840566  T
Q  384 tctctttagtagtctatttcataagaactccacag 418  Q
    ||| |||  |||   ||| ||||||||||||||||    
T  22840565 tctttttgttagctcattccataagaactccacag 22840531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 192 - 386
Target Start/End: Complemental strand, 27022111 - 27021913
Alignment:
Q  192 ccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatgat- 290  Q
    |||||||||||||||| | |||||| ||||  ||||| |||| ||||||||||| | ||||||||| |||||| | ||  ||||||||| ||||||||      
T  27022111 ccaaggctgacgagggtggggagtggtcgcgggtgcacaaggcacgacaatgagtggctcccgacaacttctagaggagccgaatcacatcggaatgaat 27022012  T
Q  291 ---agggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttct 386  Q
       |||||||| |||||| || ||||||   | |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  27022011 gagagggatcctgaggccatgtaggtataagactgcatggttgaaggaaggcttataagaattgtttggtactacttatatcaacaagatgcatcttct 27021913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 273 - 417
Target Start/End: Complemental strand, 34308626 - 34308482
Alignment:
Q  273 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 372  Q
    |||||||| |||||||| |||||||| |||||||| || |||||  | || ||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  34308626 gaatcacatcggaatgaaagggatcctgaggccgtacaagtatgagactgtatggttgaaggaaggcttataagaactgtttggtactacctatatcaac 34308527  T
Q  373 aagatgcatcttctctttagtagtctatttcataagaactccaca 417  Q
    |||||||||||||| ||  |||| ||||| |||||||||||||||    
T  34308526 aagatgcatcttcttttcggtagcctattccataagaactccaca 34308482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 272 - 418
Target Start/End: Complemental strand, 10844763 - 10844617
Alignment:
Q  272 cgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaa 371  Q
    |||| ||||||||||||| |||| ||| |||||| ||||||||||| | |||||||||||||||| |||||||||| |||||||||||||||||||| ||    
T  10844763 cgaaccacaccggaatgagagggttcctgaggccttgcaggtatgggactgcatggttgaaggaaggcttataagagttgtttggtactacctatattaa 10844664  T
Q  372 caagatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    ||||||||||||||| ||  ||||   ||| ||||||||||||||||    
T  10844663 caagatgcatcttcttttcggtagctcattccataagaactccacag 10844617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 252 - 418
Target Start/End: Original strand, 2044036 - 2044202
Alignment:
Q  252 ccgacagcttctaaatgaatcgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattg 351  Q
    |||||| |||||| | |||  |||||||| |||||||| |||||||| ||||| ||| |||||||  | | |||||||||||||| ||||||||||||||    
T  2044036 ccgacaacttctagaggaacagaatcacatcggaatgagagggatcctgaggctgtgtaggtatgagactacatggttgaaggaaggcttataagaattg 2044135  T
Q  352 tttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    |||| ||||||||||||||||||||||||| |||| ||| |||| | ||| ||||| ||||||||||    
T  2044136 tttgatactacctatatcaacaagatgcattttctttttggtagcccattccataataactccacag 2044202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 273 - 418
Target Start/End: Original strand, 25144771 - 25144916
Alignment:
Q  273 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 372  Q
    |||||||| | |||||| || |||| ||||| ||||||||||||| |||||||| ||||||| | ||||||||||||||||||||||||||||||||| |    
T  25144771 gaatcacatcagaatgagagagatctcgaggtcgtgcaggtatgggattgcatgattgaaggcaggcttataagaattgtttggtactacctatatcagc 25144870  T
Q  373 aagatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    |||||||||||||| ||  ||||   ||| ||||||||||||||||    
T  25144871 aagatgcatcttcttttcggtagctcattccataagaactccacag 25144916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 273 - 418
Target Start/End: Complemental strand, 34309086 - 34308937
Alignment:
Q  273 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacct----atat 368  Q
    |||||||| |||||||| |||||||| |||||||| || |||||  | || ||||||||||||| ||||||||||| |||||||||||||||    ||||    
T  34309086 gaatcacatcggaatgagagggatcctgaggccgtacaagtatgagactgtatggttgaaggaaggcttataagaactgtttggtactacctatatatat 34308987  T
Q  369 caacaagatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    |||||||||||||||||| ||  |||| ||||| ||||||||||||||||    
T  34308986 caacaagatgcatcttcttttcggtagcctattccataagaactccacag 34308937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 294 - 418
Target Start/End: Original strand, 12100711 - 12100835
Alignment:
Q  294 gatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagt 393  Q
    ||||| |||||||| ||||||||  | |||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||| ||  ||    
T  12100711 gatcctgaggccgtacaggtatgagactgcatggttgaaggcaagcttataagatttgtttggtactacctatatcaataagatgcatcttcttttcggt 12100810  T
Q  394 agtctatttcataagaactccacag 418  Q
    ||   |||||||||||||| |||||    
T  12100811 agctcatttcataagaacttcacag 12100835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 298 - 414
Target Start/End: Original strand, 41912994 - 41913110
Alignment:
Q  298 ccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtc 397  Q
    |||||||| ||||||||||| | |||||| ||||| ||| |||||||||||||||||||| ||||||||||||||||||||| |||||| ||| |||| |    
T  41912994 ccgaggccatgcaggtatgggactgcatgtttgaaagaaggcttataagaattgtttggtgctacctatatcaacaagatgcgtcttctttttggtagcc 41913093  T
Q  398 tatttcataagaactcc 414  Q
     ||| ||||||||||||    
T  41913094 cattccataagaactcc 41913110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 282 - 416
Target Start/End: Original strand, 17103089 - 17103223
Alignment:
Q  282 cggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcat 381  Q
    |||||||| || ||||| |||||||| ||||||||  | ||||||||||||||||  |||||||||||||||||||||| |||||||||||||| |||||    
T  17103089 cggaatgagagagatcctgaggccgtacaggtatgagactgcatggttgaaggaagacttataagaattgtttggtactgcctatatcaacaagctgcat 17103188  T
Q  382 cttctctttagtagtctatttcataagaactccac 416  Q
    ||||| ||  ||||   ||| ||||||||||||||    
T  17103189 cttcttttcggtagctcattccataagaactccac 17103223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 273 - 418
Target Start/End: Complemental strand, 21316256 - 21316111
Alignment:
Q  273 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 372  Q
    |||||||| ||  |||| ||||||||  ||||||||||||||||  | || |||||| || ||  ||||| |||||||||||||||||||||||||||||    
T  21316256 gaatcacatcgcgatgagagggatcctaaggccgtgcaggtatgagactgtatggttaaatgagcgcttaaaagaattgtttggtactacctatatcaac 21316157  T
Q  373 aagatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    |||||||||| ||| || |||||   ||||||||||||||||||||    
T  21316156 aagatgcatcgtcttttcagtagctcatttcataagaactccacag 21316111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 384
Target Start/End: Original strand, 22705181 - 22705282
Alignment:
Q  283 ggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatc 382  Q
    ||||||| |||||||| || |||||| |||||||| | || ||| ||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  22705181 ggaatgagagggatcctgaagccgtgtaggtatgggactggatgattgaaggaagggttataagaattgtttggtactacctatatcaacaagatgcatc 22705280  T
Q  383 tt 384  Q
    ||    
T  22705281 tt 22705282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 274 - 415
Target Start/End: Original strand, 25147536 - 25147677
Alignment:
Q  274 aatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaaca 373  Q
    ||||||| |||||||| || |||||  || | ||| |||||||  | |||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  25147536 aatcacatcggaatgagagagatcctaagactgtgtaggtatgagactgcatggttgaaggaaggcttataagaattgtttggtgctacctatatcaaca 25147635  T
Q  374 agatgcatcttctctttagtagtctatttcataagaactcca 415  Q
    ||||||||||||| ||  ||||   ||| |||||||||||||    
T  25147636 agatgcatcttcttttcggtagctcattccataagaactcca 25147677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 284 - 418
Target Start/End: Original strand, 25147977 - 25148111
Alignment:
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| ||||||||||||| |||| |||||||| | ||  | |||||||||| ||||||||||||||||||||  |||||||||||||||||||||| |    
T  25147977 gaatgagagggatcccgaggtcgtgtaggtatgggactgtgtcgttgaaggaaggcttataagaattgtttggtcttacctatatcaacaagatgcatat 25148076  T
Q  384 tctctttagtagtctatttcataagaactccacag 418  Q
    ||| ||  ||||   ||| ||||||||||||||||    
T  25148077 tcttttcggtagctcattccataagaactccacag 25148111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 323 - 418
Target Start/End: Original strand, 3745150 - 3745245
Alignment:
Q  323 catggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    ||||||||||||||| |||||||||| ||||| |||||||||||| |||||| ||||||||||| ||| |||| | ||| ||||| ||||||||||    
T  3745150 catggttgaaggaaaacttataagaactgtttagtactacctataccaacaatatgcatcttctttttggtagcccattccataataactccacag 3745245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 323 - 386
Target Start/End: Complemental strand, 27819343 - 27819280
Alignment:
Q  323 catggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttct 386  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  27819343 catggttgaaggaaggctaataagaattgtttggtactacctatatcaacaaaatgcatcttct 27819280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 300 - 413
Target Start/End: Original strand, 3744664 - 3744777
Alignment:
Q  300 gaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtcta 399  Q
    |||| |||| |||||||| | ||||||||||||||||  |||||||||||||||||  |||||||||| |||||| ||||| ||||| ||| ||||   |    
T  3744664 gaggtcgtgtaggtatgggactgcatggttgaaggaagacttataagaattgtttgacactacctataccaacaatatgcaccttctttttggtagcaca 3744763  T
Q  400 tttcataagaactc 413  Q
    ||||||||||||||    
T  3744764 tttcataagaactc 3744777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 211 - 384
Target Start/End: Original strand, 6466648 - 6466820
Alignment:
Q  211 ggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatgatagggatcccgaggccgtgca 310  Q
    |||||| | ||||||||| |||| | ||||||||||  |||| ||||||||| |    || | ||||| | | |||||| |||||| | ||| | ||||     
T  6466648 ggagtggttgccagtgcacaaggcatgacaatgagcagctcctgacagcttccaggcaaaccaaatcatatcagaatgagagggattctgagactgtgcg 6466747  T
Q  311 ggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatctt 384  Q
    ||||||||| ||||||||| ||||| | ||||||| ||||||||||||||||||||| ||||||||||||||||    
T  6466748 ggtatggaactgcatggttaaaggaga-cttataaaaattgtttggtactacctataccaacaagatgcatctt 6466820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 323 - 414
Target Start/End: Complemental strand, 15567653 - 15567562
Alignment:
Q  323 catggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactcc 414  Q
    |||||| ||||||| ||||||||||||||||||  ||||| |||| ||||||||| |||||||| ||| |||||  ||||||||||||||||    
T  15567653 catggtggaaggaaggcttataagaattgtttgacactacatataccaacaagatacatcttctttttggtagttcatttcataagaactcc 15567562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 307 - 377
Target Start/End: Original strand, 1297040 - 1297110
Alignment:
Q  307 tgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagat 377  Q
    ||||||||||  | ||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||    
T  1297040 tgcaggtatgagactgcatggttgaagtaaaacttataagaattgtttggtactacctataccaacaagat 1297110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 268 - 386
Target Start/End: Complemental strand, 30335060 - 30334942
Alignment:
Q  268 gaatcgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctata 367  Q
    ||||||||||||| |||||| | | |||||| ||| | |||||||||||  | |||| ||||||| |||  ||||||| ||||||||| |||||||||||    
T  30335060 gaatcgaatcacatcggaattagatggatcctgagactgtgcaggtatgcgactgcaaggttgaaagaagacttataaaaattgtttgatactacctata 30334961  T
Q  368 tcaacaagatgcatcttct 386  Q
     ||||||||| ||||||||    
T  30334960 ccaacaagatacatcttct 30334942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 323 - 386
Target Start/End: Complemental strand, 15819112 - 15819049
Alignment:
Q  323 catggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttct 386  Q
    |||||||||||||| ||||| || |||||||||||||||| |||||||||| ||||||||||||    
T  15819112 catggttgaaggaatgcttagaaaaattgtttggtactacatatatcaacatgatgcatcttct 15819049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 273 - 418
Target Start/End: Complemental strand, 30527626 - 30527484
Alignment:
Q  273 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 372  Q
    ||||||||| ||||||| |||||| |||||||||| |  |||||  | |||||| |||||  | | ||||||||||||||||||||| || || |||||     
T  30527626 gaatcacactggaatgagagggattccgaggccgtac--gtatgagactgcatgtttgaaccaga-cttataagaattgtttggtaccacttacatcaat 30527530  T
Q  373 aagatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    ||||| |||||||| ||  |||| | ||||||||||||||||||||    
T  30527529 aagatacatcttcttttgggtagcccatttcataagaactccacag 30527484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 325 - 384
Target Start/End: Complemental strand, 15568100 - 15568041
Alignment:
Q  325 tggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatctt 384  Q
    ||||||||||||  ||||||| ||||||||||||  ||||||||||||||||||||||||    
T  15568100 tggttgaaggaagacttataacaattgtttggtatgacctatatcaacaagatgcatctt 15568041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 352 - 418
Target Start/End: Complemental strand, 31283719 - 31283653
Alignment:
Q  352 tttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    ||||||||||||||||| ||||||||||||||||| ||  |||| | ||| ||||||||||||||||    
T  31283719 tttggtactacctatattaacaagatgcatcttcttttcggtagcccattccataagaactccacag 31283653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 321 - 385
Target Start/End: Original strand, 17429547 - 17429611
Alignment:
Q  321 tgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttc 385  Q
    ||||| ||||||||||  ||||| || ||| ||||||||||||||||||||||||||| ||||||    
T  17429547 tgcattgttgaaggaagacttatgagtattatttggtactacctatatcaacaagatgtatcttc 17429611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 293 - 371
Target Start/End: Complemental strand, 29971528 - 29971450
Alignment:
Q  293 ggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaa 371  Q
    |||||| ||||||||| |||||||  | | ||||||||||||||   |||||||||||||||| ||||| |||||||||    
T  29971528 ggatcctgaggccgtgtaggtatgagactacatggttgaaggaagatttataagaattgtttgatactatctatatcaa 29971450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 346 - 415
Target Start/End: Original strand, 6466329 - 6466397
Alignment:
Q  346 gaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactcca 415  Q
    ||||||||||||||||| |||| ||||||| |||||||||  ||| |||||| |||||||||||| ||||    
T  6466329 gaattgtttggtactacttataccaacaagttgcatcttccttttggtagtc-atttcataagaaatcca 6466397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 324 - 381
Target Start/End: Complemental strand, 36968491 - 36968434
Alignment:
Q  324 atggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcat 381  Q
    ||||||||||||   ||||||||||||| ||||| |||| ||||||||||||||||||    
T  36968491 atggttgaaggatgacttataagaattgattggtgctacttatatcaacaagatgcat 36968434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 144; Significance: 2e-75; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 184 - 415
Target Start/End: Original strand, 34867700 - 34867931
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    ||||||||||||||||||||||||||||||||  ||||| ||||| |||| ||||||||||||| |||| ||||||||||| | ||| ||||||||||||    
T  34867700 tgtaacacccaaggctgacgagggcgaggagtagtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaagaaccgaatcacaccg 34867799  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| |||| ||| |||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  34867800 gaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatct 34867899  T
Q  384 tctctttagtagtctatttcataagaactcca 415  Q
    ||| ||  ||||   |||||||||||||||||    
T  34867900 tcttttcggtagctcatttcataagaactcca 34867931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 182 - 386
Target Start/End: Original strand, 34371520 - 34371724
Alignment:
Q  182 attgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacac 281  Q
    |||||||||||||||||||||||||||| |||||| ||||| ||||| |||| ||||||||||||| |||| ||||||||||| | ||| ||||||||||    
T  34371520 attgtaacacccaaggctgacgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacac 34371619  T
Q  282 cggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcat 381  Q
    |||||||| |||| |||| ||||||| ||||| ||| | |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  34371620 cggaatgagagggttcccaaggccgtacaggtgtgggactgcatggttgaaggaatgcttaaaagaattgtttggtactacctatatcaacaagatgcat 34371719  T
Q  382 cttct 386  Q
    |||||    
T  34371720 cttct 34371724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 184 - 418
Target Start/End: Original strand, 2193726 - 2193960
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    |||||||||||||||||||||||||| |||||| ||||| ||||| |||| ||||||||||||| |||||||||||||||| | ||| |||||||| |||    
T  2193726 tgtaacacccaaggctgacgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcccgacagcttctagaggaaccgaatcacgccg 2193825  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| |||||||  |||||| || |||||||| | | |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  2193826 gaatgagagggatcatgaggccttgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatct 2193925  T
Q  384 tctctttagtagtctatttcataagaactccacag 418  Q
    ||| ||  ||||   ||| ||||||||||||||||    
T  2193926 tcttttcggtagctcattccataagaactccacag 2193960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 184 - 386
Target Start/End: Original strand, 34371978 - 34372180
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    |||||||||||||||||||||||||| |||||| ||||| ||||| |||| | ||||||||||| |||| ||||||||||| | ||| |||||||||||     
T  34371978 tgtaacacccaaggctgacgagggcggggagtggtcgccggtgcacaaggcaggacaatgagcggctcctgacagcttctagaggaaccgaatcacacca 34372077  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| |||| |||| ||||||| || |||||| | | |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  34372078 gaatgagagggttcccaaggccgtacaagtatgggactacatggttgaaggaatgcttaaaagaattgtttggtactacctatatcaacaagatgcatct 34372177  T
Q  384 tct 386  Q
    |||    
T  34372178 tct 34372180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 184 - 418
Target Start/End: Complemental strand, 10927183 - 10926948
Alignment:
Q  184 tgtaacacccaaggctgacgagggc-gaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacacc 282  Q
    |||||||||||  |||||||||||| | |||||||||| | ||||| |||| |||||||||||   ||||||||||||| || | ||| ||||||||| |    
T  10927183 tgtaacacccacagctgacgagggcaggggagtgatcgtcggtgcacaaggcacgacaatgagtagctcccgacagcttatagaggaaccgaatcacatc 10927084  T
Q  283 ggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatc 382  Q
     |||||| |||||||| |||| |||| |||||||| | | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  10927083 agaatgagagggatcctgaggtcgtgtaggtatgggactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatc 10926984  T
Q  383 ttctctttagtagtctatttcataagaactccacag 418  Q
    |||  ||| |||||| ||| ||||||||||||||||    
T  10926983 ttccttttggtagtccattccataagaactccacag 10926948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 183 - 418
Target Start/End: Complemental strand, 20039711 - 20039477
Alignment:
Q  183 ttgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacacc 282  Q
    ||||||||||||||||||||||||||| ||| || ||||| ||||| |||| | ||||||||||  |||||||||||||||| |  || ||||||||| |    
T  20039711 ttgtaacacccaaggctgacgagggcggggaatggtcgccggtgcacaaggcatgacaatgagcagctcccgacagcttctagacaaaccgaatcacatc 20039612  T
Q  283 ggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatc 382  Q
    ||||||| |||||||  ||||||||| |||||| | | | ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  20039611 ggaatgagagggatcatgaggccgtgtaggtataggactacatagttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatt 20039512  T
Q  383 ttctctttagtagtctatttcataagaactccacag 418  Q
    |||| ||| |||| | ||| ||||||||||| ||||    
T  20039511 ttct-tttggtagcccattccataagaactctacag 20039477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 184 - 415
Target Start/End: Complemental strand, 21886382 - 21886151
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    ||||||||| |||||||| |||||||  ||||| ||||| ||||| |||| ||||||||||||| |||| |  |||||||| | ||| ||||||||||||    
T  21886382 tgtaacaccgaaggctgatgagggcggagagtggtcgccggtgcacaaggcacgacaatgagcggctcctggtagcttctagaggaaccgaatcacaccg 21886283  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| |||| ||| ||||  |||||||||||| | |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  21886282 gaatgagagggttcctgaggttgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacatatatcaacaagatgcatct 21886183  T
Q  384 tctctttagtagtctatttcataagaactcca 415  Q
    ||| ||  ||||   ||| |||||||||||||    
T  21886182 tcttttcggtagctcattccataagaactcca 21886151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 184 - 418
Target Start/End: Original strand, 39146849 - 39147083
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    |||||||||||||||||||||||| | |||||||||||| ||||| |||| ||||||||||||| |||| |||| |||||| | |||  |||||||| ||    
T  39146849 tgtaacacccaaggctgacgagggtggggagtgatcgccggtgcacaaggcacgacaatgagcggctcctgacaacttctagaggaactgaatcacatcg 39146948  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
     ||||| |||||||  ||||||||| |||||||| | | |||||||||||| |  ||||||||||||||||| |||||| ||||| ||||||||||||||    
T  39146949 aaatgagagggatcatgaggccgtgtaggtatgggactacatggttgaaggtagacttataagaattgtttgatactacttatattaacaagatgcatct 39147048  T
Q  384 tctctttagtagtctatttcataagaactccacag 418  Q
    ||| ||| |||| | ||| ||||||||||||||||    
T  39147049 tctttttggtagcccattccataagaactccacag 39147083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 196 - 418
Target Start/End: Complemental strand, 10927628 - 10927405
Alignment:
Q  196 ggctgacgagggc-gaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatgataggg 294  Q
    ||||||||||||| | |||||||||| | ||||| |||| ||||||||||||  ||||| ||| ||| || | ||| ||||||||| |||||||| ||||    
T  10927628 ggctgacgagggcaggggagtgatcgtcggtgcacaaggcacgacaatgagcagctcccaacaacttatagaggaaccgaatcacatcggaatgagaggg 10927529  T
Q  295 atcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagta 394  Q
    |||  ||||||||| |||||||  | | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||    
T  10927528 atcttgaggccgtgtaggtatgagactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctttttggta 10927429  T
Q  395 gtctatttcataagaactccacag 418  Q
    | | ||| ||||||||||||||||    
T  10927428 gcccattccataagaactccacag 10927405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 184 - 418
Target Start/End: Complemental strand, 27647072 - 27646837
Alignment:
Q  184 tgtaacacccaaggctgacgagggc-gaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacacc 282  Q
    |||||| ||||  |||||||||||| | |||||| | ||| ||||| |||| ||| ||||| ||| |||||||||||||||| | ||| ||||||||| |    
T  27647072 tgtaacgcccacagctgacgagggcaggggagtggttgccggtgcacaaggcacgccaatgtgcggctcccgacagcttctagaggaaccgaatcacatc 27646973  T
Q  283 ggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatc 382  Q
    ||||||| ||||||||   ||||||| ||||||||   | |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  27646972 ggaatgagagggatcctagggccgtgtaggtatggggctacatggttgaaggaaggcttataagaattgtttggtactacctataacaacaagatgcatc 27646873  T
Q  383 ttctctttagtagtctatttcataagaactccacag 418  Q
    |||| ||| |||| | ||||||||||||||||||||    
T  27646872 ttctttttggtagcccatttcataagaactccacag 27646837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 182 - 386
Target Start/End: Complemental strand, 42788883 - 42788680
Alignment:
Q  182 attgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacac 281  Q
    |||||||||||||||||||||||||||| |||||| ||||| ||||| |||| || ||| |||||| ||| ||||| |||||| | ||| |||||||||     
T  42788883 attgtaacacccaaggctgacgagggcggggagtggtcgccggtgcacaaggcacaaca-tgagcggctctcgacaacttctagaggaaccgaatcacaa 42788785  T
Q  282 cggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcat 381  Q
    |||||||| |||||||| ||||||||| |||  ||| | | |||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||    
T  42788784 cggaatgagagggatcctgaggccgtgtaggattgggactacatggttgaaagaagacttataagaattgtttggtactacctatatcaacaagatgcat 42788685  T
Q  382 cttct 386  Q
    |||||    
T  42788684 cttct 42788680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 177 - 386
Target Start/End: Complemental strand, 17445698 - 17445489
Alignment:
Q  177 gaggcattgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaat 276  Q
    |||| |||||||||||||||||| || ||| || |||||| ||| | ||||| |||| | | ||||||||| ||||| ||| |||||| | ||| |||||    
T  17445698 gaggaattgtaacacccaaggctaacaaggacggggagtggtcgacggtgcacaaggcatggcaatgagcggctcccaacaacttctagaggaaccgaat 17445599  T
Q  277 cacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaaga 376  Q
    |||| || ||||| |||||||| ||||||||| ||| |||| | | |||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  17445598 cacatcgaaatgagagggatcctgaggccgtgtaggcatgggactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaaga 17445499  T
Q  377 tgcatcttct 386  Q
    ||||||||||    
T  17445498 tgcatcttct 17445489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 184 - 386
Target Start/End: Original strand, 18304341 - 18304543
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    ||||||||||||| ||||||||| || |||||||||||| ||||| |||  ||||||||||||| |||||||||||||||| | ||| | ||||||| ||    
T  18304341 tgtaacacccaagactgacgaggacggggagtgatcgccggtgcacaagacacgacaatgagcggctcccgacagcttctagacgaaccaaatcacaacg 18304440  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| | |||||| |||| |||| |||||||| | | ||||| ||| | ||||||||||  ||||||||||||||||||||||||||||||||||| |    
T  18304441 gaatgagaaggatcctgaggtcgtgtaggtatgggactacatggatgatgaaaagcttatataaattgtttggtactacctatatcaacaagatgcatat 18304540  T
Q  384 tct 386  Q
    |||    
T  18304541 tct 18304543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 182 - 417
Target Start/End: Complemental strand, 5067128 - 5066894
Alignment:
Q  182 attgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacac 281  Q
    ||||||||||||| |||||||||||  | |||||| ||||| ||||  |||  || |||||||||| ||| || || |||||| |  |||||||||||||    
T  5067128 attgtaacacccatggctgacgaggatggggagtggtcgccggtgcgcaagacacaacaatgagcggctctcg-caacttctagacaaatcgaatcacac 5067030  T
Q  282 cggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcat 381  Q
    | |||||| || ||||||||||||||||| |||||  | || ||| || ||||||| |||||||||||||||||||| || |||||||||||||||||||    
T  5067029 cagaatgagagagatcccgaggccgtgcatgtatgagactgtatgattaaaggaaaacttataagaattgtttggtattatctatatcaacaagatgcat 5066930  T
Q  382 cttctctttagtagtctatttcataagaactccaca 417  Q
     |||| ||| |||||||||||||||| |||||||||    
T  5066929 tttctttttggtagtctatttcataaaaactccaca 5066894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 184 - 417
Target Start/End: Complemental strand, 15513249 - 15513015
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    ||||||||||||||||||||||| || |||||| ||||| ||||| |||| |||| |||||||| |||||||||| || || | ||| ||||||||| ||    
T  15513249 tgtaacacccaaggctgacgaggacggggagtggtcgccggtgcacaaggcacgataatgagcggctcccgacagtttttagaggaaccgaatcacatcg 15513150  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaagga--aagcttataagaattgtttggtactacctatatcaacaagatgcat 381  Q
    |||||| |||||||   |||| ||| |||||||| | | |||||||||||||  | |||||||||||||| ||||||||||| |||||||||||||||||    
T  15513149 gaatgagagggatcattaggctgtgtaggtatgggactacatggttgaaggaatatgcttataagaattg-ttggtactaccaatatcaacaagatgcat 15513051  T
Q  382 cttctctttagtagtct-atttcataagaactccaca 417  Q
    ||||| ||| ||| ||| ||| |||||||||||||||    
T  15513050 cttctttttggta-tctcattccataagaactccaca 15513015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 273 - 418
Target Start/End: Original strand, 189067 - 189212
Alignment:
Q  273 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 372  Q
    |||||||| |||||||| |||||||| |||||||| || |||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  189067 gaatcacatcggaatgagagggatcctgaggccgtacatgtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaac 189166  T
Q  373 aagatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    |||||| ||||||| ||  ||||   ||| ||||||||||||||||    
T  189167 aagatgtatcttcttttcggtagctcattccataagaactccacag 189212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 273 - 418
Target Start/End: Complemental strand, 8642181 - 8642036
Alignment:
Q  273 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 372  Q
    |||||||| | |||||| ||||||||  ||||||||||||||||| | |||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  8642181 gaatcacatcagaatgagagggatcctaaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattatttggtactacctatatcaac 8642082  T
Q  373 aagatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    |||||||||||||| ||  ||||   ||| ||||||||||||||||    
T  8642081 aagatgcatcttcttttcggtagctcattccataagaactccacag 8642036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 273 - 386
Target Start/End: Original strand, 22556535 - 22556648
Alignment:
Q  273 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 372  Q
    |||||||| |||||||| |||| ||| |||||||||||||||||| | |||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  22556535 gaatcacatcggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttatatgaattgtttggtactacctatatcaac 22556634  T
Q  373 aagatgcatcttct 386  Q
    ||||||||||||||    
T  22556635 aagatgcatcttct 22556648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 305 - 417
Target Start/End: Original strand, 1821937 - 1822049
Alignment:
Q  305 cgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttca 404  Q
    ||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| | ||| ||    
T  1821937 cgtgcaggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagcccattcca 1822036  T
Q  405 taagaactccaca 417  Q
    |||||||||||||    
T  1822037 taagaactccaca 1822049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 273 - 418
Target Start/End: Complemental strand, 3886748 - 3886603
Alignment:
Q  273 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 372  Q
    |||||||| |||||||| |||||||| |||| ||| || |||||| | |||||||| ||||||| ||||||| |||||||||||||||||||||||||||    
T  3886748 gaatcacatcggaatgagagggatcctgaggtcgtacaagtatgggactgcatggtagaaggaatgcttatatgaattgtttggtactacctatatcaac 3886649  T
Q  373 aagatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    |||||||||||||| ||  ||||   ||| ||||||||||||||||    
T  3886648 aagatgcatcttcttttcggtagctcattccataagaactccacag 3886603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 273 - 418
Target Start/End: Original strand, 2473958 - 2474103
Alignment:
Q  273 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 372  Q
    |||||||| |||||||| ||||||||  ||| ||| |||| |||  | |||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  2473958 gaatcacatcggaatgagagggatcctaaggtcgtacaggcatgagactgcatggttgaaggaaggcttataagaattgtttggtactgcctatatcaac 2474057  T
Q  373 aagatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    |||||||||||||| ||  ||||   ||| ||||||||||||||||    
T  2474058 aagatgcatcttcttttcggtagctcattccataagaactccacag 2474103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 273 - 386
Target Start/End: Complemental strand, 3887204 - 3887091
Alignment:
Q  273 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 372  Q
    |||||||| |||||||| || ||||| |||||||| ||||||||| | ||||||||||||||||  |||||| ||||| |||||||||||||||||||||    
T  3887204 gaatcacatcggaatgagagtgatcctgaggccgtacaggtatgggactgcatggttgaaggaagacttatatgaattatttggtactacctatatcaac 3887105  T
Q  373 aagatgcatcttct 386  Q
    ||||||||||||||    
T  3887104 aagatgcatcttct 3887091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 273 - 386
Target Start/End: Original strand, 22556968 - 22557081
Alignment:
Q  273 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 372  Q
    |||||||| |||||||| || | ||  |||||||||||||||||| | |||||||||||||||| ||||||| |||||||||||||||||| ||||||||    
T  22556968 gaatcacatcggaatgagagagttcatgaggccgtgcaggtatgggactgcatggttgaaggaaggcttatatgaattgtttggtactaccaatatcaac 22557067  T
Q  373 aagatgcatcttct 386  Q
    ||||||||||||||    
T  22557068 aagatgcatcttct 22557081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 273 - 418
Target Start/End: Original strand, 2474404 - 2474549
Alignment:
Q  273 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 372  Q
    |||||||| |||||||| || |||||  ||| ||| ||| ||||| | ||||||||||||||||  |||| |||||||||||||||||||||||||||||    
T  2474404 gaatcacatcggaatgagagagatcctaaggtcgtacagatatgggactgcatggttgaaggaagacttaaaagaattgtttggtactacctatatcaac 2474503  T
Q  373 aagatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    |||||||||||||| ||  ||||   ||| ||||||||||||||||    
T  2474504 aagatgcatcttcttttcggtagctcattccataagaactccacag 2474549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 183 - 418
Target Start/End: Original strand, 1879990 - 1880220
Alignment:
Q  183 ttgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacacc 282  Q
    |||||||||| ||||||||||||| || | || | ||||| |||||||||| ||||||||||| ||||||| ||| |||||| |  || | |||||||||    
T  1879990 ttgtaacaccaaaggctgacgaggacgggaagcggtcgccggtgcataaggcacgacaatgagtgactcccaacaacttctagacaaaccaaatcacacc 1880089  T
Q  283 ggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatc 382  Q
     |||||| ||||||| |||| |||||||| ||||  | ||||||||||||||||      ||||||||||   ||||| ||||||| ||||| ||||||     
T  1880090 agaatgagagggatctcgagaccgtgcagttatgtgactgcatggttgaaggaa----gttaagaattgtccagtacttcctatattaacaa-atgcata 1880184  T
Q  383 ttctctttagtagtctatttcataagaactccacag 418  Q
    |||| ||| |||||||||| || |||||||| ||||    
T  1880185 ttctttttggtagtctattccacaagaactctacag 1880220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 195 - 418
Target Start/End: Complemental strand, 4658217 - 4657995
Alignment:
Q  195 aggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatgataggg 294  Q
    |||||||| ||| || |||||| |||||||||||||| | | |||||||| ||||||| |||||| ||||    ||  |||||||| || ||| | ||||    
T  4658217 aggctgacaaggacggggagtggtcgccagtgcataatgcatgacaatgaccgactcctgacagcctctaggcaaactgaatcacatcgaaataagaggg 4658118  T
Q  295 atcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagta 394  Q
    |||  ||  |||||||||||||  | | |||||||||| ||| | |||||||| ||||||| ||||||||||| |||||| ||||||||||| ||| |||    
T  4658117 atcttgaaaccgtgcaggtatgagacttcatggttgaacgaa-gattataagacttgtttgatactacctataacaacaacatgcatcttctttttggta 4658019  T
Q  395 gtctatttcataagaactccacag 418  Q
    ||| ||| |||||||||| |||||    
T  4658018 gtccattccataagaacttcacag 4657995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 305 - 415
Target Start/End: Complemental strand, 18750311 - 18750201
Alignment:
Q  305 cgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttca 404  Q
    ||||||||| ||||| |||||||||||||||| | |||||| ||||||||||||||||||||| ||| |||||||||||||| ||  ||||  |||| ||    
T  18750311 cgtgcaggtttggaactgcatggttgaaggaaggattataacaattgtttggtactacctataccaaaaagatgcatcttcttttcggtagcttattcca 18750212  T
Q  405 taagaactcca 415  Q
    |||||||||||    
T  18750211 taagaactcca 18750201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 273 - 354
Target Start/End: Complemental strand, 22975157 - 22975076
Alignment:
Q  273 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgttt 354  Q
    |||||||| |||||||| |||||||| |||||||||||||||||  | ||||||||||||| ||||||||||||||||||||    
T  22975157 gaatcacatcggaatgagagggatcctgaggccgtgcaggtatgtgactgcatggttgaagaaaagcttataagaattgttt 22975076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 272 - 415
Target Start/End: Complemental strand, 8391469 - 8391327
Alignment:
Q  272 cgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaa 371  Q
    ||||||||| |||||||| |||||| | ||||||||| ||| |||  | | |||| |||||||||  |||||||||||||||||||||| ||| ||||||    
T  8391469 cgaatcacatcggaatgagagggattctgaggccgtgtaggcatgagactacatgattgaaggaagacttataagaattgtttggtact-cctgtatcaa 8391371  T
Q  372 caagatgcatcttctctttagtagtctatttcataagaactcca 415  Q
    ||||||||||||||| ||  ||||   ||| |||||||||||||    
T  8391370 caagatgcatcttcttttcggtagctaattccataagaactcca 8391327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 321 - 395
Target Start/End: Complemental strand, 16370807 - 16370733
Alignment:
Q  321 tgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtag 395  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| | ||||||| ||| ||||    
T  16370807 tgcatggttgaaggaaaacttataagaattgtttggtactacttatatcaacaagacgtatcttctttttggtag 16370733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 272 - 386
Target Start/End: Complemental strand, 30719953 - 30719839
Alignment:
Q  272 cgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaa 371  Q
    ||||||||| | |||||| |||||||| ||||  ||||| |||||| |   ||| |||||||||| ||||||| ||||||||||||||||||||||  ||    
T  30719953 cgaatcacatcagaatgagagggatcctgaggttgtgcaagtatgggacatcattgttgaaggaaggcttatatgaattgtttggtactacctataaaaa 30719854  T
Q  372 caagatgcatcttct 386  Q
    |||||||||||||||    
T  30719853 caagatgcatcttct 30719839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 300 - 418
Target Start/End: Complemental strand, 29680220 - 29680109
Alignment:
Q  300 gaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtcta 399  Q
    ||||||||| |||||||| | | |||||||||||||| |||||||||       ||||| ||||||||||||||||||||||||||| ||| |||| | |    
T  29680220 gaggccgtgtaggtatgggactacatggttgaaggaaggcttataag-------tggtaatacctatatcaacaagatgcatcttctttttggtagccca 29680128  T
Q  400 tttcataagaactccacag 418  Q
    || ||||||||||||||||    
T  29680127 ttacataagaactccacag 29680109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 324 - 386
Target Start/End: Complemental strand, 24182341 - 24182279
Alignment:
Q  324 atggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttct 386  Q
    ||||||||||||| ||||||||||||| |||||||||| ||||| ||||||||||||||||||    
T  24182341 atggttgaaggaaggcttataagaattatttggtactatctataccaacaagatgcatcttct 24182279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 274 - 386
Target Start/End: Complemental strand, 30684702 - 30684590
Alignment:
Q  274 aatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaaca 373  Q
    ||||||| ||||||||  ||||||| ||||  ||||| ||||||||   ||| |||||||| | ||||||| |||||||||||||||| |||||  ||||    
T  30684702 aatcacatcggaatgagggggatcctgaggttgtgcaagtatggaacatcattgttgaagggaggcttatatgaattgtttggtactatctataaaaaca 30684603  T
Q  374 agatgcatcttct 386  Q
    |||||||||||||    
T  30684602 agatgcatcttct 30684590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 300 - 418
Target Start/End: Complemental strand, 4673591 - 4673473
Alignment:
Q  300 gaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtcta 399  Q
    ||||||||| || ||| ||| | |||| |||||||||  |||||||||||| |||||||  |||| |||||||||||||||| |||| ||| ||| |  |    
T  4673591 gaggccgtgtagatatagaactacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttca 4673492  T
Q  400 tttcataagaactccacag 418  Q
    || ||||||||||||||||    
T  4673491 ttccataagaactccacag 4673473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 240 - 386
Target Start/End: Complemental strand, 11160861 - 11160715
Alignment:
Q  240 aatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagc 339  Q
    |||||||| || ||||||  || || ||||| |||||  || |||||||| |||||||  || | |||| |||||||  | | ||| |||||||||| ||    
T  11160861 aatgagcggcttccgacaatttttagatgaaccgaattgcatcggaatgagagggatcatgaagtcgtgtaggtatgacactacatagttgaaggaaggc 11160762  T
Q  340 ttataagaattgtttggtactacctatatcaacaagatgcatcttct 386  Q
    |||||| ||||||||||||||| |||| |||||||||||||| ||||    
T  11160761 ttataataattgtttggtactatctatgtcaacaagatgcatattct 11160715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 328 - 380
Target Start/End: Complemental strand, 2058748 - 2058696
Alignment:
Q  328 ttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgca 380  Q
    |||||||||  |||||| |||||||||||||||||||||||||||||||||||    
T  2058748 ttgaaggaagacttatatgaattgtttggtactacctatatcaacaagatgca 2058696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 323 - 386
Target Start/End: Original strand, 42429194 - 42429257
Alignment:
Q  323 catggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttct 386  Q
    |||||||||||||   |||||||||||||||||||||||||| ||||||||| |||||| ||||    
T  42429194 catggttgaaggaggacttataagaattgtttggtactacctttatcaacaatatgcatattct 42429257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 328 - 415
Target Start/End: Complemental strand, 20858633 - 20858546
Alignment:
Q  328 ttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactcca 415  Q
    |||||| || ||||||||||||||||||||| |  ||||||||||||||||| |||||| ||  ||||   ||| |||||||||||||    
T  20858633 ttgaagaaaggcttataagaattgtttggtattttctatatcaacaagatgcttcttcttttctgtagctcattccataagaactcca 20858546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 351 - 384
Target Start/End: Complemental strand, 39801531 - 39801498
Alignment:
Q  351 gtttggtactacctatatcaacaagatgcatctt 384  Q
    ||||||||||||||||||||||||||||||||||    
T  39801531 gtttggtactacctatatcaacaagatgcatctt 39801498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 339 - 391
Target Start/End: Complemental strand, 43356701 - 43356649
Alignment:
Q  339 cttataagaattgtttggtactacctatatcaacaagatgcatcttctcttta 391  Q
    ||||||||||||||||||||| ||||| | |||||| ||||||||||| ||||    
T  43356701 cttataagaattgtttggtacaacctaaaccaacaatatgcatcttcttttta 43356649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 338 - 384
Target Start/End: Complemental strand, 32574740 - 32574694
Alignment:
Q  338 gcttataagaattgtttggtactacctatatcaacaagatgcatctt 384  Q
    ||||||| ||||||||||||||||||||||  ||||| |||||||||    
T  32574740 gcttataggaattgtttggtactacctatacaaacaaaatgcatctt 32574694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 354 - 418
Target Start/End: Complemental strand, 11757347 - 11757283
Alignment:
Q  354 tggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    ||||||||| ||||||||||| ||||||||||| ||  |||||  | | ||||||||||||||||    
T  11757347 tggtactacttatatcaacaaaatgcatcttcttttcggtagttcaatccataagaactccacag 11757283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 143; Significance: 7e-75; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 184 - 418
Target Start/End: Complemental strand, 12692229 - 12691995
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    |||||||||||||||||||||||||| |||||| ||||| ||||| |||| ||||||||||||| |||| ||||||||||| | ||| ||||||||||||    
T  12692229 tgtaacacccaaggctgacgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacaccg 12692130  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| |||| ||| |||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  12692129 gaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatct 12692030  T
Q  384 tctctttagtagtctatttcataagaactccacag 418  Q
    ||| ||  ||||   ||| ||||||||||||||||    
T  12692029 tcttttcggtagctcattccataagaactccacag 12691995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 184 - 418
Target Start/End: Complemental strand, 1645979 - 1645745
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    |||||||||||||||||||||||||| |||||| ||||| ||||| |||| ||||||||||||| |||| ||||||||||| | ||| ||||||||| ||    
T  1645979 tgtaacacccaaggctgacgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacatcg 1645880  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| ||| |||  ||||||||| |||||||| | | ||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||    
T  1645879 gaatgagaggaatcttgaggccgtgtaggtatgggactacatggttgaaggaagacttataagaattgtttggtattacctatatcaacaagatgcatct 1645780  T
Q  384 tctctttagtagtctatttcataagaactccacag 418  Q
    ||| ||| |||| | ||| ||||||||||||||||    
T  1645779 tctttttggtagcccattccataagaactccacag 1645745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 184 - 418
Target Start/End: Complemental strand, 23943016 - 23942785
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    ||||||||| |||| ||||||||||| |||||| ||||| ||||| |||| ||||||||||||   ||| ||||||||||| | ||| ||||||||| ||    
T  23943016 tgtaacacctaaggatgacgagggcggggagtggtcgccggtgcacaaggcacgacaatgagc---tcctgacagcttctagaggaaccgaatcacatcg 23942920  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| |||||||| | ||||||| |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23942919 gaatgagagggatcctggggccgtgtaggtatggaactacatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 23942820  T
Q  384 tctctttagtagtctatttcataagaactccacag 418  Q
    ||| ||| ||||   ||| ||||||||||||||||    
T  23942819 tcttttttgtagcacattccataagaactccacag 23942785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 184 - 412
Target Start/End: Complemental strand, 4128120 - 4127891
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaa-atgaatcgaatcacacc 282  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||| |||| ||||||||||||| ||||| ||||||||||| | ||||||||||||| |    
T  4128120 tgtaacacccaaggctgacgagggcgaggagtggtcgccggtgcacaaggcacgacaatgagcggctcccaacagcttctaagaggaatcgaatcacatc 4128021  T
Q  283 ggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatc 382  Q
    ||||||| |||||||| |||||| || ||| |||  | |  ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  4128020 ggaatgagagggatcctgaggccatgtaggcatgagactatatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatc 4127921  T
Q  383 ttctctttagtagtctatttcataagaact 412  Q
    |||| ||  |||| | ||| ||||||||||    
T  4127920 ttcttttcggtagccaattccataagaact 4127891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 184 - 418
Target Start/End: Complemental strand, 4127668 - 4127433
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaa-atgaatcgaatcacacc 282  Q
    ||||||||||||| |||||||||||| |||||| ||||| ||||| |||| ||||||||||||| ||||||||| ||||||| | ||| ||||||||| |    
T  4127668 tgtaacacccaagactgacgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcccgacaacttctaagaggaaccgaatcacatc 4127569  T
Q  283 ggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatc 382  Q
    ||||||| |||||||| |||||| || |||||||| | | ||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  4127568 ggaatgagagggatcctgaggccatgtaggtatgggactacatagttgaaggaagacttataagaattgtttggtactacctatatcaacaagatgcatc 4127469  T
Q  383 ttctctttagtagtctatttcataagaactccacag 418  Q
    |||| ||  ||||   ||| ||||||||||||||||    
T  4127468 ttcttttcggtagctcattccataagaactccacag 4127433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 184 - 415
Target Start/End: Complemental strand, 50398768 - 50398537
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    |||||||||||||||||||||||||| |||||| ||||| ||||| |||| | ||||||||||| ||||||||| |||||| |  |  ||||||||| ||    
T  50398768 tgtaacacccaaggctgacgagggcggggagtggtcgccggtgcacaaggcatgacaatgagcggctcccgacaacttctagacaagccgaatcacatcg 50398669  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| |||||||| ||||||||| |||||| | | | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  50398668 gaatgagagggatcctgaggccgtgtaggtataggactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatct 50398569  T
Q  384 tctctttagtagtctatttcataagaactcca 415  Q
    ||| ||  ||||   ||| |||||||||||||    
T  50398568 tcttttcggtagctcattccataagaactcca 50398537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 186 - 418
Target Start/End: Complemental strand, 24629208 - 24628973
Alignment:
Q  186 taacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccgga 285  Q
    ||||||| |||||| |||||||  ||||||| ||||| ||||| |||| ||||||||||||| |||| ||||||||||  | ||| ||||||||||||||    
T  24629208 taacacctaaggctaacgagggacaggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttcttgaggaaccgaatcacaccgga 24629109  T
Q  286 atgatagggatcccgaggccgtgcaggtatggaattgcatggttgaagga---aagcttataagaattgtttggtactacctatatcaacaagatgcatc 382  Q
    |||| |||| ||| ||||||||| |||||||| | ||||||||| |||||   | |||||||||||||||||||||||||||||||||||||||||||||    
T  24629108 atgagagggttcctgaggccgtgtaggtatgggactgcatggttaaaggaattaggcttataagaattgtttggtactacctatatcaacaagatgcatc 24629009  T
Q  383 ttctctttagtagtctatttcataagaactccacag 418  Q
    |||| || |||||    || ||||||||||||||||    
T  24629008 ttcttttcagtagctcgttccataagaactccacag 24628973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 184 - 386
Target Start/End: Complemental strand, 24629662 - 24629461
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    |||||||||||||||| ||||||  | |||||| ||||| || || |||| ||||||||||||| |||  ||||||||||| | ||| ||||||||||||    
T  24629662 tgtaacacccaaggctaacgaggtgg-ggagtggtcgccggttcacaaggcacgacaatgagcggctcttgacagcttctagaggaaccgaatcacaccg 24629564  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| |||| ||| |||| |||| |||||||| | ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  24629563 gaatgagagggttcctgaggtcgtgtaggtatgggactgcatggttaaaggaatgcttataagaattgtttggtactacctatatcaacaagatgcatct 24629464  T
Q  384 tct 386  Q
    |||    
T  24629463 tct 24629461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 184 - 417
Target Start/End: Original strand, 3169116 - 3169349
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    |||||||||||||| |||||||| || |||||| || || ||||| |||  |||||||||||||||||| |||||||| || | ||| ||||||||| ||    
T  3169116 tgtaacacccaaggttgacgaggacggggagtggtcaccggtgcacaagacacgacaatgagcgactcctgacagcttatagaggaaccgaatcacatcg 3169215  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| ||| |||  ||||||||| |||||||| | | ||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||||    
T  3169216 gaatgagaggaatcatgaggccgtgtaggtatgggactacatggttgaaggaagacttataaaaattgtttggtactacctatatcaacaagatgcatct 3169315  T
Q  384 tctctttagtagtctatttcataagaactccaca 417  Q
    ||| ||| |||  | | | |||||||||||||||    
T  3169316 tctttttggtaacccaatccataagaactccaca 3169349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 184 - 410
Target Start/End: Complemental strand, 9424088 - 9423862
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    |||||||||||  |  |||||||||| |||||| ||| | ||||| |||| ||||||| ||| | ||||||||  |||||| | ||| ||||||||||||    
T  9424088 tgtaacacccacagaagacgagggcggggagtggtcgtcggtgcacaaggcacgacaaagagtggctcccgacgacttctagacgaaccgaatcacaccg 9423989  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| |||||||| |||| |||||| |||||| | |||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  9423988 gaatgagagggatcctgaggtcgtgcatgtatgggactgcatggttgaaagaaggcttataataattgtttggtactacctatatcaacaagatgcatct 9423889  T
Q  384 tctctttagtagtctatttcataagaa 410  Q
    ||| | |||||| | ||| ||||||||    
T  9423888 tctttctagtagcccattccataagaa 9423862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 183 - 418
Target Start/End: Complemental strand, 50399224 - 50398989
Alignment:
Q  183 ttgtaaca-cccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacac 281  Q
    |||||||| |||| |||||||||||||| |||||| ||||||||||| |||| | ||||||||||| || | |||| |||||| |  |  |||||||||     
T  50399224 ttgtaacatcccagggctgacgagggcg-ggagtggtcgccagtgcacaaggcatgacaatgagcggcttctgacaacttctagacaagccgaatcacat 50399126  T
Q  282 cggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcat 381  Q
    |||||||| |||||||| ||| ||||| |||||||  ||| |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  50399125 cggaatgagagggatcctgagaccgtgtaggtatgagattacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacacgatgcat 50399026  T
Q  382 cttctctttagtagtctatttcataagaactccacag 418  Q
    ||||| ||  ||||   ||| ||||||||||||||||    
T  50399025 cttcttttcggtagctcattccataagaactccacag 50398989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 182 - 418
Target Start/End: Complemental strand, 29628899 - 29628664
Alignment:
Q  182 attgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacac 281  Q
    ||||||||| ||||||| ||||||| || |||||| ||||| ||||| |||| ||| ||||||| | || | ||||||||||| | ||| |||||||||     
T  29628899 attgtaacatccaaggcggacgaggacggggagtggtcgccggtgcacaaggcacgccaatgagtggcttctgacagcttctagaggaaccgaatcacat 29628800  T
Q  282 cggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcat 381  Q
    || ||||| |||||||| ||||||||| |||||||  | | ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||  |    
T  29628799 cgaaatgagagggatcctgaggccgtgtaggtatgagactacatggttgaaggaagacttataagaattgtttggtactacctatatcaacaagatgtgt 29628700  T
Q  382 cttctctttagtagtctatttcataagaactccacag 418  Q
    ||| | ||| |||| | ||| ||||||||||||||||    
T  29628699 ctt-tgtttggtagcccattccataagaactccacag 29628664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 184 - 418
Target Start/End: Original strand, 14351705 - 14351939
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    ||||||||||||||||||  |||    |||||| | ||| ||||| |||| ||||||||||||| ||||||||| |||||| |  || |||||||||||     
T  14351705 tgtaacacccaaggctgataaggctagggagtggttgccggtgcacaaggcacgacaatgagcggctcccgacaacttctagacaaaccgaatcacacca 14351804  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| |||||||| |||| |||||| |||||    |||||||||||||||| |||| ||||| || |||||||||| |||||||||||||||||||||    
T  14351805 gaatgagagggatcctgaggtcgtgcatgtatgagtctgcatggttgaaggaaggcttgtaagagttttttggtactatctatatcaacaagatgcatct 14351904  T
Q  384 tctctttagtagtctatttcataagaactccacag 418  Q
    ||| ||| |||  ||||| ||||||||||||||||    
T  14351905 tctttttggtatcctattccataagaactccacag 14351939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 184 - 418
Target Start/End: Original strand, 21067648 - 21067875
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    |||||||||||||  ||| ||||||| |||||| ||||| ||||| |||| ||||||||||||| |||||||||  || || | ||| |||||||||||     
T  21067648 tgtaacacccaagt-tgatgagggcggggagtggtcgccggtgcagaaggcacgacaatgagcggctcccgacaaattatagacgaaccgaatcacacca 21067746  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||  |   ||||||||||||||||||||||| | ||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||| ||| |    
T  21067747 gaatggaa---atcccgaggccgtgcaggtatgggactgcatggttgaaggaagacttataagaattgtttggtgctacctatatcaacaagatacattt 21067843  T
Q  384 tctctttagtagtctatttcataagaactccacag 418  Q
    |   ||| |||||| ||| |||||||||| |||||    
T  21067844 t---tttggtagtccattccataagaacttcacag 21067875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 224 - 386
Target Start/End: Complemental strand, 21220521 - 21220359
Alignment:
Q  224 gtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgc 323  Q
    ||||| |||| ||||||||||||| |||||| ||||||||| | ||| ||||||||| | |||||| |||||||  |||||| || ||||||| || |      
T  21220521 gtgcacaaggcacgacaatgagcggctcccggcagcttctagaggaaccgaatcacatcagaatgagagggatcatgaggccatgtaggtatgaaactat 21220422  T
Q  324 atggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttct 386  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  21220421 atggttgaaggaatgcttataagaattgtttggtactacctatatcaacaagatgcatcttct 21220359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 184 - 418
Target Start/End: Complemental strand, 53996345 - 53996111
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    ||||||||  ||||||||||| ||  | ||||| ||||| ||||| |||| ||||||||||||| ||||| ||| ||| || | ||| ||||||||| ||    
T  53996345 tgtaacacggaaggctgacgacggacaagagtggtcgccggtgcacaaggcacgacaatgagcggctcccaacaacttttagaggaaccgaatcacatcg 53996246  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| | |||||| |||||  || || ||||| | | |||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||    
T  53996245 gaatgagaaggatcctgaggctatgtagatatgggactacatggttgaaggaatgcttataaaaattgtttggtactacctatatcaacaagattcatct 53996146  T
Q  384 tctctttagtagtct-atttcataagaactccacag 418  Q
    ||| ||| ||| ||| ||| ||||||||||||||||    
T  53996145 tctttttggta-tctcattccataagaactccacag 53996111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 212 - 386
Target Start/End: Original strand, 21067220 - 21067394
Alignment:
Q  212 gagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatgatagggatcccgaggccgtgcag 311  Q
    ||||| |||||  |||| |||| |||| |||||||| ||||||||| ||| || | |||||||||||||||||||||| ||||||||||||| ||||||     
T  21067220 gagtggtcgccgatgcacaaggcacgataatgagcggctcccgacaacttatagacgaatcgaatcacaccggaatgagagggatcccgaggtcgtgcat 21067319  T
Q  312 gtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttct 386  Q
    |||||  | ||||||||||||||||  || |||| |||| ||||||||||| |||||||||||||||||||||||    
T  21067320 gtatgagactgcatggttgaaggaagactaataataattatttggtactacatatatcaacaagatgcatcttct 21067394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 186 - 418
Target Start/End: Complemental strand, 51331509 - 51331277
Alignment:
Q  186 taacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccgga 285  Q
    |||||||||||||||| ||||||| |||||| | | | ||||| |||| | || ||||||||  |||| | | |||||| |  |  ||||||||| ||||    
T  51331509 taacacccaaggctgatgagggcggggagtggttgtcggtgcacaaggcatgataatgagcggttccctataacttctagacaagccgaatcacatcgga 51331410  T
Q  286 atgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttc 385  Q
    |||| ||| |||  ||||||||| |||||||| | | |||||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||    
T  51331409 atgagaggaatcatgaggccgtgtaggtatgggactacatggttgaaggaaggcttataagaattgtttggtactatctatatcaacaagatacatcttc 51331310  T
Q  386 tctttagtagtctatttcataagaactccacag 418  Q
    | ||  ||||   ||||||||||||||||||||    
T  51331309 ttttcggtagctcatttcataagaactccacag 51331277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 183 - 412
Target Start/End: Complemental strand, 31818083 - 31817854
Alignment:
Q  183 ttgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacacc 282  Q
    ||||||||||| ||  |||||| || | ||||||||||||  |||| |||| | |||||| | ||  |||||| |||||||    ||||||||||||| |    
T  31818083 ttgtaacacccgagattgacgatggtggggagtgatcgccgatgcacaaggcatgacaataaacggatcccgaaagcttctggtcgaatcgaatcacatc 31817984  T
Q  283 ggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatc 382  Q
    ||||| | ||||||   |||| | |||| |||||| | |||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||    
T  31817983 ggaataagagggattatgaggtcatgcatgtatgggactgcatggttgaaggaaggcttataagaattgttcggtactacctataccaacaagatgcatc 31817884  T
Q  383 ttctctttagtagtctatttcataagaact 412  Q
    |||| ||  |||||| ||||||||||||||    
T  31817883 ttcttttcggtagtccatttcataagaact 31817854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 273 - 386
Target Start/End: Complemental strand, 14572291 - 14572178
Alignment:
Q  273 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 372  Q
    |||||||| |||||||| |||||||| |||||| || |||||||| | | |||||||||||| | |||||||||||||||||||||||||||||||||||    
T  14572291 gaatcacatcggaatgagagggatcctgaggccatgtaggtatgggactacatggttgaagggaggcttataagaattgtttggtactacctatatcaac 14572192  T
Q  373 aagatgcatcttct 386  Q
    ||||||||||||||    
T  14572191 aagatgcatcttct 14572178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 188 - 418
Target Start/End: Complemental strand, 23943464 - 23943238
Alignment:
Q  188 acacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaat 287  Q
    ||||| |||| |||||||| ||  ||||| ||||| ||| || ||| ||||||||||||| |||  ||||||||||| | ||| ||||||||| |  |||    
T  23943464 acacctaaggatgacgaggacggagagtggtcgccggtgtatgaggcacgacaatgagcggctcttgacagcttctagaggaaccgaatcacatcaaaat 23943365  T
Q  288 gatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctc 387  Q
    ||||||||||| ||||| ||| |||||||  |   ||||||||||||||  ||||||| || | |||||||||||||||||||||||||||||||||||     
T  23943364 gatagggatcctgaggc-gtgtaggtatgtca---catggttgaaggaagacttataaaaaatatttggtactacctatatcaacaagatgcatcttctt 23943269  T
Q  388 tttagtagtctatttcataagaactccacag 418  Q
    ||| ||||   ||| ||||||||||||||||    
T  23943268 tttggtagcacattccataagaactccacag 23943238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 274 - 418
Target Start/End: Original strand, 49998636 - 49998780
Alignment:
Q  274 aatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaaca 373  Q
    ||||||| |||||||| ||||||||  |||| ||| ||| |||| | ||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  49998636 aatcacatcggaatgagagggatcctaaggctgtgtaggcatgggactgcatggttgaaggaagacttataagaattgtttggtactacctatatcaaca 49998735  T
Q  374 agatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    ||||||||||||| ||  ||||   ||| ||||||||||||||||    
T  49998736 agatgcatcttcttttcggtagctcattccataagaactccacag 49998780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 184 - 386
Target Start/End: Complemental strand, 8468029 - 8467828
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    |||||| ||| ||| ||||||||||| |||||| ||||||||||| |||| | |||| || ||| |||| | |||||||||    || |||| |||| |     
T  8468029 tgtaacgcccgaggttgacgagggcggggagtggtcgccagtgcacaaggcatgacattgcgcggctcctggcagcttctaggc-aaccgaaccacatca 8467931  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| |||||||| ||| | |||||||||||  | | ||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||    
T  8467930 gaatgaaagggatcctgagactgtgcaggtatgagactacatggttgaaggaagacttataagaattgtttggtactacctataccaacaagatgcatct 8467831  T
Q  384 tct 386  Q
    |||    
T  8467830 tct 8467828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 285 - 418
Target Start/End: Complemental strand, 14571850 - 14571717
Alignment:
Q  285 aatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatctt 384  Q
    ||||| |||||||  ||| ||||| |||||||| | | |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  14571850 aatgaaagggatcttgagtccgtgtaggtatgggacttcatggttgaagggatgcttataagaattgtttggtactacctatatcaacaagatgcatctt 14571751  T
Q  385 ctctttagtagtctatttcataagaactccacag 418  Q
    || || ||||| |||   ||||||||||||||||    
T  14571750 cttttcagtagcctaaaccataagaactccacag 14571717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 273 - 386
Target Start/End: Complemental strand, 23350424 - 23350311
Alignment:
Q  273 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 372  Q
    |||||||| |||||||| || ||||  |||||||| |||||| || | |||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  23350424 gaatcacatcggaatgagagagatcttgaggccgtacaggtaggggactgcatggttgaaggaaggcttataagaattgtttggtacttcctatatcaac 23350325  T
Q  373 aagatgcatcttct 386  Q
    ||||||||||||||    
T  23350324 aagatgcatcttct 23350311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 273 - 418
Target Start/End: Original strand, 35871627 - 35871771
Alignment:
Q  273 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 372  Q
    |||||||| |||||||| |||||||| |||||||| ||||||||| | | |||||||||||||| ||||||| |||||||||||||| ||||||||||||    
T  35871627 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggacttcatggttgaaggaaggcttatatgaattgtttggtaccacctatatcaac 35871726  T
Q  373 aagatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    ||||||||| |||| ||  ||||   ||| ||||||||||||||||    
T  35871727 aagatgcat-ttcttttcggtagctcattccataagaactccacag 35871771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 273 - 418
Target Start/End: Complemental strand, 44471466 - 44471321
Alignment:
Q  273 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 372  Q
    |||||||| |||||||| || ||||  |||||||| ||||||||  | | ||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  44471466 gaatcacatcggaatgagagagatcttgaggccgtacaggtatgagactacatggttgaaggaagacttataagaattgtttggtactacctatatcaac 44471367  T
Q  373 aagatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    |||||||||||||| ||  ||||   ||| ||||||||||||||||    
T  44471366 aagatgcatcttcttttcggtagctcattccataagaactccacag 44471321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 184 - 417
Target Start/End: Original strand, 1464057 - 1464290
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    ||||||||||||| || |||| | ||  ||||| ||||| |||||||||  | |||||||| || ||  ||||| ||| || | ||| ||||||||| |     
T  1464057 tgtaacacccaagactaacgaagacggagagtggtcgccggtgcataagacatgacaatgaacggctttcgacaccttttagacgaaccgaatcacatca 1464156  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| |||||||  | | ||||| |||||||  | | ||| |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  1464157 gaatgagagggatcatgcgaccgtgtaggtatgagaatacatagttgaaagaaaacttataagaattgtttggtactacctatatcaacaagatgcatct 1464256  T
Q  384 tctctttagtagtctatttcataagaactccaca 417  Q
    ||| ||  ||||   |||||||||||||| ||||    
T  1464257 tcttttcggtagctcatttcataagaacttcaca 1464290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 323 - 418
Target Start/End: Complemental strand, 7678713 - 7678618
Alignment:
Q  323 catggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||  ||||  |||| ||||||||||||||||    
T  7678713 catggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagcttattccataagaactccacag 7678618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 294 - 386
Target Start/End: Original strand, 17628531 - 17628623
Alignment:
Q  294 gatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttct 386  Q
    |||||||||||| ||||| || |  ||| |||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  17628531 gatcccgaggccatgcagataagtgatttcatggttgaaggtaggcttataagaattgtttggtactacctataccaacaagatgcatcttct 17628623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 325 - 417
Target Start/End: Complemental strand, 43929052 - 43928961
Alignment:
Q  325 tggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactccaca 417  Q
    |||| ||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||| ||| ||||| ||||||||||||| ||||||    
T  43929052 tggtcgaaggaaagcttacaagaattgtttggtactacatataccaacaagatgcatcttctttttggtagt-tatttcataagaaatccaca 43928961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 184 - 418
Target Start/End: Original strand, 27029188 - 27029421
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    |||||||||| ||||||||||||||| |||||| |||||| |||| || ||| ||||||||||| || | |  ||||| ||    || ||||| ||| |     
T  27029188 tgtaacacccgaggctgacgagggcggggagtggtcgccaatgcacaatgtatgacaatgagcggcttctggtagcttataggaaaaccgaattacatca 27029287  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| |||||| | | | || |||||| |||  | | || | |||||||||  |||||||||||| ||||||||||| ||||||||||||||||||||    
T  27029288 gaatgagagggattcgg-gaccatgcaggaatgagactacacgattgaaggaagacttataagaattatttggtactacttatatcaacaagatgcatct 27029386  T
Q  384 tctctttagtagtctatttcataagaactccacag 418  Q
    ||| ||  |||| | ||| ||||||||||||||||    
T  27029387 tcttttcggtagcccattccataagaactccacag 27029421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 324 - 386
Target Start/End: Complemental strand, 44470964 - 44470902
Alignment:
Q  324 atggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttct 386  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  44470964 atggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttct 44470902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 213 - 363
Target Start/End: Complemental strand, 53855008 - 53854858
Alignment:
Q  213 agtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatgatagggatcccgaggccgtgcagg 312  Q
    |||||| ||||||| | ||||  |||||||||||| ||||||||||||| || | ||| ||||||||| |||||||| |||||||  || || ||| |||    
T  53855008 agtgattgccagtgtacaaggctcgacaatgagcggctcccgacagcttatagacgaaccgaatcacatcggaatgagagggatcatgaagcagtgtagg 53854909  T
Q  313 tatggaattgcatggttgaaggaaagcttataagaattgtttggtactacc 363  Q
    ||||  | |  |||||||||||||  |||||||||||||||||||||||||    
T  53854908 tatgagactatatggttgaaggaagacttataagaattgtttggtactacc 53854858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 184 - 384
Target Start/End: Original strand, 27026414 - 27026613
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    |||||| ||| |||||||||||  || |||||| ||| | ||||| |||| | |||||||||||||||| |  ||||| ||    || ||||||||| |     
T  27026414 tgtaacgcccgaggctgacgagaacggggagtggtcgtcggtgcacaaggcatgacaatgagcgactcctggtagcttttaggcaaaccgaatcacatca 27026513  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| ||||||   | | | |||||||||||| | | || | ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  27026514 gaatgagagggatattg-gacggtgcaggtatgggactacacgattgaaggaaggcttataagaattgtttgatactacctatatcaacaagatgcatct 27026612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 195 - 386
Target Start/End: Complemental strand, 31817617 - 31817426
Alignment:
Q  195 aggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatgataggg 294  Q
    |||||||||||| || |||||| || |||||||| |||| | |||||||||||  ||||||||  || || |  |   |||||||| || ||| | ||||    
T  31817617 aggctgacgaggccggggagtggtcaccagtgcacaaggcatgacaatgagcggttcccgacaatttttagacaaggagaatcacatcgaaataagaggg 31817518  T
Q  295 atcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttct 386  Q
    |||  |||| |||||| |||||  | | |||||||||||||| | |||||| ||||||||||||||||||||| |||||| |||||||||||    
T  31817517 atcatgaggtcgtgcatgtatgagacttcatggttgaaggaacgtttataataattgtttggtactacctataccaacaaaatgcatcttct 31817426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 13266115 - 13266196
Alignment:
Q  303 gccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatctt 384  Q
    ||||||||||||||| | |||||||||||||||| |||||||| |||| ||| ||||| |||||||||| ||||||||||||    
T  13266115 gccgtgcaggtatgggaatgcatggttgaaggaaggcttataataattttttagtactccctatatcaataagatgcatctt 13266196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 340 - 418
Target Start/End: Complemental strand, 50814899 - 50814821
Alignment:
Q  340 ttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||  ||||   ||| ||||||||||||||||    
T  50814899 ttataagaattgtttggtactatctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacag 50814821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 273 - 418
Target Start/End: Original strand, 17029329 - 17029474
Alignment:
Q  273 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 372  Q
    |||| ||| |||||||| |||||||  |||| |||||| |||||| | ||||| |||||| |||  ||| ||| |||||||| |||||||||||||||||    
T  17029329 gaattacatcggaatgagagggatctagaggtcgtgcaagtatgggactgcatagttgaatgaagacttgtaataattgtttagtactacctatatcaac 17029428  T
Q  373 aagatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    ||||||||| ||   ||| |||   |||| ||||||||||||||||    
T  17029429 aagatgcatattacttttggtaccttattccataagaactccacag 17029474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 274 - 386
Target Start/End: Original strand, 41869918 - 41870030
Alignment:
Q  274 aatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaaca 373  Q
    ||||||| |||| ||| |||||||| ||| | || ||  ||||| | |||||| |||||||||  |||||||||||||| || |||||||||||||||||    
T  41869918 aatcacatcggagtgagagggatcctgagactgtacatatatgggactgcatgattgaaggaagacttataagaattgtatgatactacctatatcaaca 41870017  T
Q  374 agatgcatcttct 386  Q
    ||| |||||||||    
T  41870018 agacgcatcttct 41870030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 282 - 418
Target Start/End: Complemental strand, 52048798 - 52048663
Alignment:
Q  282 cggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcat 381  Q
    |||||||| |||| |||  ||||||| |||||||| || ||||| | |||||||||  |||||||||||||||| |||||| ||||  ||||||||||||    
T  52048798 cggaatgagagggttcctaaggccgtacaggtatgaaactgcatagctgaaggaaaatttataagaattgtttgatactacgtatactaacaagatgcat 52048699  T
Q  382 cttctctttagtagtctatttcataagaactccacag 418  Q
    ||||  |||   |||| ||| ||||||||||||||||    
T  52048698 cttcattttgtaagtc-attccataagaactccacag 52048663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 273 - 384
Target Start/End: Original strand, 17028873 - 17028984
Alignment:
Q  273 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 372  Q
    |||||||| |||||||| |||||||| || ||| |||| |||||| | ||||| |||||||||    || ||||||||||| ||| ||||||||||||||    
T  17028873 gaatcacatcggaatgagagggatcctgaagccttgcatgtatgggactgcatagttgaaggaggatttgtaagaattgttaggtgctacctatatcaac 17028972  T
Q  373 aagatgcatctt 384  Q
    ||||||| ||||    
T  17028973 aagatgcgtctt 17028984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 272 - 386
Target Start/End: Complemental strand, 13614039 - 13613925
Alignment:
Q  272 cgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaa 371  Q
    |||||||||  ||||||| |||||||| ||||  ||||| | |||  | | |||||| ||||||   ||||||||||||||||| ||| |||||||||||    
T  13614039 cgaatcacaatggaatgagagggatccagaggttgtgcatgcatgagactccatggtagaaggagtacttataagaattgtttgataccacctatatcaa 13613940  T
Q  372 caagatgcatcttct 386  Q
    |||||||||||||||    
T  13613939 caagatgcatcttct 13613925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 338 - 384
Target Start/End: Complemental strand, 20306237 - 20306191
Alignment:
Q  338 gcttataagaattgtttggtactacctatatcaacaagatgcatctt 384  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||    
T  20306237 gcttataagaattgtttggtactatctatatcaacaagatgcatctt 20306191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 321 - 386
Target Start/End: Complemental strand, 23976312 - 23976247
Alignment:
Q  321 tgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttct 386  Q
    |||||| |||||||||   ||||||||||||||||||||||||||||  |||||||||||||||||    
T  23976312 tgcatgattgaaggaagagttataagaattgtttggtactacctatactaacaagatgcatcttct 23976247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 292 - 392
Target Start/End: Original strand, 17628986 - 17629086
Alignment:
Q  292 gggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctcttta 391  Q
    |||||||  ||| ||||||||||||  | || |||||||||  ||| |||||||||||||||||||||||||||||  || ||||||| |||||| ||||    
T  17628986 gggatcctaaggtcgtgcaggtatgtgaatgtatggttgaataaaaacttataagaattgtttggtactacctatactaataagatgcctcttcttttta 17629085  T
Q  392 g 392  Q
    |    
T  17629086 g 17629086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 331 - 418
Target Start/End: Original strand, 4186224 - 4186311
Alignment:
Q  331 aaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    |||||| ||||||||||||  |||||||||||||| || |||||||| |||||||| ||| |||| | ||| |||||||||| |||||    
T  4186224 aaggaatgcttataagaatgatttggtactacctacatgaacaagattcatcttctttttggtagcccattgcataagaactacacag 4186311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 323 - 418
Target Start/End: Original strand, 44831046 - 44831141
Alignment:
Q  323 catggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    |||||||||||| |||||||||| ||||||||||||||||||| |  ||||||||| || |||| ||  |||| | |||||||| ||||| |||||    
T  44831046 catggttgaagggaagcttataaaaattgtttggtactacctaaactaacaagatgtatattcttttcggtagcccatttcatatgaacttcacag 44831141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 340 - 386
Target Start/End: Complemental strand, 27578531 - 27578485
Alignment:
Q  340 ttataagaattgtttggtactacctatatcaacaagatgcatcttct 386  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||    
T  27578531 ttataagaattatttggtgctacctatatcaacaagatgcatcttct 27578485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 343 - 417
Target Start/End: Original strand, 33764929 - 33765003
Alignment:
Q  343 taagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactccaca 417  Q
    ||||||||||||||| ||||||||| |||||||||||||||||| ||| ||||   |||| ||||||||| ||||    
T  33764929 taagaattgtttggtgctacctataccaacaagatgcatcttcttttttgtagctcattttataagaacttcaca 33765003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 284 - 418
Target Start/End: Complemental strand, 15306227 - 15306087
Alignment:
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattg------tttggtactacctatatcaacaagat 377  Q
    |||||| |||||||| ||||| ||| |||||||| | | |||||| ||| |||  ||||||||| |||      ||||||||||||||||| ||||||||    
T  15306227 gaatgagagggatcctgaggctgtgtaggtatgggactacatggtcgaaagaagacttataagatttgagcaattttggtactacctatataaacaagat 15306128  T
Q  378 gcatcttctctttagtagtctatttcataagaactccacag 418  Q
    ||||||||| ||  ||||   ||| ||||||||||||||||    
T  15306127 gcatcttcttttcggtagctcattccataagaactccacag 15306087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 300 - 395
Target Start/End: Original strand, 4185741 - 4185836
Alignment:
Q  300 gaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtag 395  Q
    |||||| ||||||||||  |  |||||||| ||||||  | ||||||||||||||| ||| || |||| |||||||||||||||||| ||| ||||    
T  4185741 gaggccatgcaggtatgagacggcatggttaaaggaatacatataagaattgtttgataccacatataccaacaagatgcatcttctttttggtag 4185836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 384
Target Start/End: Original strand, 42838690 - 42838733
Alignment:
Q  341 tataagaattgtttggtactacctatatcaacaagatgcatctt 384  Q
    ||||| |||||||||||||||||||||||||||| |||||||||    
T  42838690 tataaaaattgtttggtactacctatatcaacaaaatgcatctt 42838733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 341 - 386
Target Start/End: Complemental strand, 23091584 - 23091539
Alignment:
Q  341 tataagaattgtttggtactacctatatcaacaagatgcatcttct 386  Q
    ||||| |||||||||||||||| ||||| |||||||||||||||||    
T  23091584 tataaaaattgtttggtactacatatattaacaagatgcatcttct 23091539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 349 - 386
Target Start/End: Complemental strand, 39902518 - 39902481
Alignment:
Q  349 ttgtttggtactacctatatcaacaagatgcatcttct 386  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  39902518 ttgtttggtactatctatatcaacaagatgcatcttct 39902481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 412
Target Start/End: Original strand, 34554483 - 34554567
Alignment:
Q  328 ttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaact 412  Q
    ||||| ||| ||||||||||||||||||  |||||||||| || |||||||||| || | ||| |||| | ||| ||||||||||    
T  34554483 ttgaaagaatgcttataagaattgtttgacactacctataccagcaagatgcattttatttttggtagaccattccataagaact 34554567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 321 - 377
Target Start/End: Original strand, 53391934 - 53391990
Alignment:
Q  321 tgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagat 377  Q
    ||||||||||||| || |||||||| ||||||||| ||| | |||||||||||||||    
T  53391934 tgcatggttgaagaaatgcttataaaaattgtttgataccatctatatcaacaagat 53391990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 339 - 371
Target Start/End: Complemental strand, 27578984 - 27578952
Alignment:
Q  339 cttataagaattgtttggtactacctatatcaa 371  Q
    |||||||||||||||||||||||| ||||||||    
T  27578984 cttataagaattgtttggtactacatatatcaa 27578952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 282 - 386
Target Start/End: Original strand, 45682211 - 45682315
Alignment:
Q  282 cggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcat 381  Q
    |||||||| || ||||  |||||| ||||  ||||| | | |||| ||||| ||| | ||||||||||| ||||||| || ||||| |||||||||||||    
T  45682211 cggaatgagagagatcttgaggccatgcatatatgggactacatgattgaatgaaggtttataagaattatttggtattatctataccaacaagatgcat 45682310  T
Q  382 cttct 386  Q
     ||||    
T  45682311 tttct 45682315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 143; Significance: 7e-75; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 184 - 418
Target Start/End: Complemental strand, 20054316 - 20054082
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    |||||||||||||||||||||||||| |||||| ||||| ||||| |||| ||||||||||||| |||| ||||||||||| | ||| ||||||||||||    
T  20054316 tgtaacacccaaggctgacgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacaccg 20054217  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| |||| ||| |||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  20054216 gaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatct 20054117  T
Q  384 tctctttagtagtctatttcataagaactccacag 418  Q
    ||| ||  ||||   ||| ||||||||||||||||    
T  20054116 tcttttcggtagctcattccataagaactccacag 20054082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 184 - 418
Target Start/End: Complemental strand, 20054772 - 20054538
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    |||||||||||||||||||||||||| |||||| ||||| ||||| |||| ||||||||||||| |||| ||||||||||| | ||| ||||||||||||    
T  20054772 tgtaacacccaaggctgacgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacaccg 20054673  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| |||| ||| |||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  20054672 gaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatct 20054573  T
Q  384 tctctttagtagtctatttcataagaactccacag 418  Q
    ||| ||  ||||   ||| ||||||||||||||||    
T  20054572 tcttttcggtagctcattccataagaactccacag 20054538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 184 - 418
Target Start/End: Complemental strand, 20055228 - 20054994
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    |||||||||||||||||||||||||| |||||| ||||| ||||| |||| ||||||||||||| |||| ||||||||||| | ||| ||||||||||||    
T  20055228 tgtaacacccaaggctgacgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacaccg 20055129  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| |||| ||| |||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  20055128 gaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatct 20055029  T
Q  384 tctctttagtagtctatttcataagaactccacag 418  Q
    ||| ||  ||||   ||| ||||||||||||||||    
T  20055028 tcttttcggtagctcattccataagaactccacag 20054994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 184 - 418
Target Start/End: Complemental strand, 20055684 - 20055450
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    |||||||||||||||||||||||||| |||||| ||||| ||||| |||| ||||||||||||| |||| ||||||||||| | ||| ||||||||||||    
T  20055684 tgtaacacccaaggctgacgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacaccg 20055585  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| |||| ||| |||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  20055584 gaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatct 20055485  T
Q  384 tctctttagtagtctatttcataagaactccacag 418  Q
    ||| ||  ||||   ||| ||||||||||||||||    
T  20055484 tcttttcggtagctcattccataagaactccacag 20055450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 184 - 418
Target Start/End: Complemental strand, 20056140 - 20055906
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    |||||||||||||||||||||||||| |||||| ||||| ||||| |||| ||||||||||||| |||| ||||||||||| | ||| ||||||||||||    
T  20056140 tgtaacacccaaggctgacgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacaccg 20056041  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| |||| ||| |||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  20056040 gaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatct 20055941  T
Q  384 tctctttagtagtctatttcataagaactccacag 418  Q
    ||| ||  ||||   ||| ||||||||||||||||    
T  20055940 tcttttcggtagctcattccataagaactccacag 20055906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 184 - 418
Target Start/End: Complemental strand, 20056596 - 20056362
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    |||||||||||||||||||||||||| |||||| ||||| ||||| |||| ||||||||||||| |||| ||||||||||| | ||| ||||||||||||    
T  20056596 tgtaacacccaaggctgacgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacaccg 20056497  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| |||| ||| |||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  20056496 gaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatct 20056397  T
Q  384 tctctttagtagtctatttcataagaactccacag 418  Q
    ||| ||  ||||   ||| ||||||||||||||||    
T  20056396 tcttttcggtagctcattccataagaactccacag 20056362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 184 - 418
Target Start/End: Complemental strand, 20057499 - 20057265
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    |||||||||||||||||||||||||| |||||| ||||| ||||| |||| ||||||||||||| |||| ||||||||||| | ||| ||||||||||||    
T  20057499 tgtaacacccaaggctgacgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacaccg 20057400  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| |||| ||| |||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  20057399 gaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatct 20057300  T
Q  384 tctctttagtagtctatttcataagaactccacag 418  Q
    ||| ||  ||||   ||| ||||||||||||||||    
T  20057299 tcttttcggtagctcattccataagaactccacag 20057265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 183 - 418
Target Start/End: Complemental strand, 16452170 - 16451935
Alignment:
Q  183 ttgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacacc 282  Q
    ||||||||||||||||||||||||||| |||||| ||||| ||||| |||| ||||||||||||| |||||||||||||||| | ||||||||||||| |    
T  16452170 ttgtaacacccaaggctgacgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcccgacagcttctagaggaatcgaatcacatc 16452071  T
Q  283 ggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatc 382  Q
    ||||||| |||||||| |||||| || ||||| || | | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  16452070 ggaatgagagggatcctgaggccttgtaggtaggggactacatggttgaaggaaagcttataagaattgttgggtactacctatatcaacaagatgcatc 16451971  T
Q  383 ttctctttagtagtctatttcataagaactccacag 418  Q
    |||| ||  |||||  ||| ||||||||||||||||    
T  16451970 ttcttttcggtagttcattccataagaactccacag 16451935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 183 - 418
Target Start/End: Complemental strand, 16461323 - 16461088
Alignment:
Q  183 ttgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacacc 282  Q
    ||||||||||||||||||||||||||| |||||| ||||| ||||| |||| ||||||||||||| |||||||||||||||| | ||||||||||||| |    
T  16461323 ttgtaacacccaaggctgacgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcccgacagcttctagaggaatcgaatcacatc 16461224  T
Q  283 ggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatc 382  Q
    ||||||| |||||||| |||||| || ||||| || | | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  16461223 ggaatgagagggatcctgaggccttgtaggtaggggactacatggttgaaggaaagcttataagaattgttgggtactacctatatcaacaagatgcatc 16461124  T
Q  383 ttctctttagtagtctatttcataagaactccacag 418  Q
    |||| ||  |||||  ||| ||||||||||||||||    
T  16461123 ttcttttcggtagttcattccataagaactccacag 16461088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 184 - 418
Target Start/End: Complemental strand, 20845897 - 20845663
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    ||||||||||||||||||||||| || |||||| ||||| ||||| |||| ||||||||||||| |||| ||||||||||| | ||| ||||||||||||    
T  20845897 tgtaacacccaaggctgacgaggacggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacaccg 20845798  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| | || ||| |||||||||||||||||  | |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  20845797 gaatgagacggttcctgaggccgtgcaggtatgagactgcatggttgaaggaaggcttataagaattgtttgttactacctatatcaacaagatgcatct 20845698  T
Q  384 tctctttagtagtctatttcataagaactccacag 418  Q
    ||| ||  ||||   ||| ||||||||||||||||    
T  20845697 tcttttcggtagctcattccataagaactccacag 20845663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 184 - 418
Target Start/End: Complemental strand, 20057955 - 20057721
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    |||||||||||||| ||||||||||| |||||| ||||| ||||| |||| ||||||||||||| ||||  |||||||||| | |||  |||||||||||    
T  20057955 tgtaacacccaaggttgacgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctaacagcttctagaggaactgaatcacaccg 20057856  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
     ||||| |||| ||| |||||||||||||||||| | |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  20057855 aaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatct 20057756  T
Q  384 tctctttagtagtctatttcataagaactccacag 418  Q
    ||| ||  ||||   ||| ||||||||||||||||    
T  20057755 tcttttcggtagctcattccataagaactccacag 20057721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 184 - 385
Target Start/End: Original strand, 38340816 - 38341017
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    |||||||||||||||||||||||| | |||||| || || ||||| |||| ||||||||||||| || | ||||||||||| | ||| ||||||||||||    
T  38340816 tgtaacacccaaggctgacgagggtggggagtggtcaccggtgcacaaggcacgacaatgagcggctactgacagcttctagaggaaccgaatcacaccg 38340915  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| | || ||| |||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  38340916 gaatgagatggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatct 38341015  T
Q  384 tc 385  Q
    ||    
T  38341016 tc 38341017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 184 - 418
Target Start/End: Original strand, 52250116 - 52250350
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    ||||| |||||||||||||||||||| |||| | ||||| ||||| |||| ||||||||||||| |||||||||||||||| | ||| ||||||||||||    
T  52250116 tgtaatacccaaggctgacgagggcggggagcggtcgccggtgcacaaggcacgacaatgagcggctcccgacagcttctagaggaaccgaatcacaccg 52250215  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| |||||||  |||||| || |||||||| | | |||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  52250216 gaatgagagggatcatgaggccttgtaggtatgggactacatggtcgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatct 52250315  T
Q  384 tctctttagtagtctatttcataagaactccacag 418  Q
    ||| ||  ||||   ||| ||||||||||||||||    
T  52250316 tcttttcggtagctcattccataagaactccacag 52250350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 184 - 418
Target Start/End: Complemental strand, 43057759 - 43057525
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    |||||||||||||||||| ||||||| ||| || ||||| ||||| |||| | | ||||||||| ||||||||||||| || | ||| ||||||||| ||    
T  43057759 tgtaacacccaaggctgaagagggcggggaatggtcgccggtgcacaaggcatgccaatgagcggctcccgacagcttttagaggaaccgaatcacatcg 43057660  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| |||||||| ||||||||| |||||||  | | |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  43057659 gaatgagagggatcctgaggccgtgtaggtatgagactacatggttgaaggaaggcttataagaattgtttggtactacctatattaacaagatgcatct 43057560  T
Q  384 tctctttagtagtctatttcataagaactccacag 418  Q
    ||| ||  |||| | ||| ||||||||||||||||    
T  43057559 tcttttcggtagcccattccataagaactccacag 43057525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 188 - 418
Target Start/End: Original strand, 12883438 - 12883668
Alignment:
Q  188 acacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaat 287  Q
    |||| ||||||| ||||||| |  ||||| ||| | ||||| |||| ||||||||||||| ||| |||||||||||| | ||| ||||||||||||||||    
T  12883438 acactcaaggctaacgagggtggtgagtggtcgtcggtgcacaaggcacgacaatgagcggctctcgacagcttctagacgaaccgaatcacaccggaat 12883537  T
Q  288 gatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctc 387  Q
    || | |||||||||||| |||||||||||| | |||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||     
T  12883538 gagatggatcccgaggctgtgcaggtatgggactgcatgattgaaggaatacttataagaattgtttggtactacctatatcaacaagatgcattttctt 12883637  T
Q  388 tttagtagtctatttcataagaactccacag 418  Q
    ||| ||||   ||| ||||| ||||||||||    
T  12883638 tttggtagctcattccataaaaactccacag 12883668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 184 - 418
Target Start/End: Complemental strand, 51373110 - 51372876
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    ||||||||||||| ||||||||| ||| ||||| | |||||||||||||| ||||||||||||||||||||||| |||||| | | | | ||||||||      
T  51373110 tgtaacacccaagactgacgaggacgaagagtggttgccagtgcataaggcacgacaatgagcgactcccgacatcttctagacgtaccaaatcacacta 51373011  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| ||||||||||||||| | ||||||||  | || ||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||    
T  51373010 gaatgagagggatcccgaggccatacaggtatgtgactgtatggttgaaggaaggcttataagaattgtttagtactacctatatcgacaagatgcatct 51372911  T
Q  384 tctctttagtagtctatttcataagaactccacag 418  Q
    | | ||  ||||   ||| ||||||||||||||||    
T  51372910 tattttcggtagctcattccataagaactccacag 51372876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 184 - 418
Target Start/End: Complemental strand, 20057043 - 20056818
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    |||||||||||||||||||||||||| |||||| ||||| ||||| |||| ||||||||||||| |||| ||||||||||| | ||| ||||||||||||    
T  20057043 tgtaacacccaaggctgacgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacaccg 20056944  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| |||| ||| |         |||||||| | |||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  20056943 gaatgagagggttcctg---------aggtatgggactgcagggttgaaggaaggcttatgagaattgtttggtactacctatatcaacaagatgcatct 20056853  T
Q  384 tctctttagtagtctatttcataagaactccacag 418  Q
    ||| ||  ||||   ||| ||||||||||||||||    
T  20056852 tcttttcggtagctcattccataagaactccacag 20056818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 184 - 418
Target Start/End: Complemental strand, 43057300 - 43057067
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    ||||||||||||||||||||||| || |||||| | ||| ||||| |||| | |||||||||||||||||||||  ||||| | ||| ||||||||| |     
T  43057300 tgtaacacccaaggctgacgaggacggggagtggttgccggtgcacaaggcatgacaatgagcgactcccgacaatttctagaggaaccgaatcacatca 43057201  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    ||||||  |||||||  |||||||| |||||||  | | |||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||    
T  43057200 gaatgag-gggatcctaaggccgtgtaggtatgtgactacatggttgaaggaaggcttagaagaattgtttgatactacctatatcaacaagatgcatct 43057102  T
Q  384 tctctttagtagtctatttcataagaactccacag 418  Q
    ||| ||  |||| | ||| ||||||||||||||||    
T  43057101 tcttttcggtagcccattccataagaactccacag 43057067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 183 - 417
Target Start/End: Complemental strand, 30873188 - 30872953
Alignment:
Q  183 ttgtaacacccaaggctgacgagggcgag--gagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcaca 280  Q
    |||||||| |||||||||||||||||| |  ||||| ||| | ||||| |||| ||||||||||||| || | ||||  ||||| | ||| |||||||||    
T  30873188 ttgtaacatccaaggctgacgagggcgcgtggagtggtcgtcggtgcacaaggcacgacaatgagcggcttc-gacaatttctagacgaaccgaatcaca 30873090  T
Q  281 ccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgca 380  Q
    ||||||||| |||||| | |||||||||||||||||  | || |||||||||||||  ||| ||||||||||||| ||||||||||||||||||||||||    
T  30873089 ccggaatgagagggattctgaggccgtgcaggtatgagactgtatggttgaaggaagacttttaagaattgtttgatactacctatatcaacaagatgca 30872990  T
Q  381 tcttctctttagtagtctatttcataagaactccaca 417  Q
    |||||| ||| |||||| |||  ||||||||||||||    
T  30872989 tcttctttttggtagtccattctataagaactccaca 30872953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 273 - 386
Target Start/End: Complemental strand, 35759755 - 35759642
Alignment:
Q  273 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 372  Q
    |||||||| |||||||| |||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35759755 gaatcacatcggaatgagagggatcctgaggccgtgcaggtatgggactgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 35759656  T
Q  373 aagatgcatcttct 386  Q
    ||||||||||||||    
T  35759655 aagatgcatcttct 35759642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 273 - 395
Target Start/End: Complemental strand, 35761061 - 35760939
Alignment:
Q  273 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 372  Q
    |||||||| |||||||| |||||||| |||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35761061 gaatcacatcggaatgagagggatcctgaggccgtgcaggtatgagactgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 35760962  T
Q  373 aagatgcatcttctctttagtag 395  Q
    |||||||||||||| ||| ||||    
T  35760961 aagatgcatcttctttttggtag 35760939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 273 - 418
Target Start/End: Complemental strand, 20061338 - 20061193
Alignment:
Q  273 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 372  Q
    |||||||| | |||||| |||||||| |||| ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20061338 gaatcacatcagaatgagagggatcctgaggtcgtgcaggtatgggactgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 20061239  T
Q  373 aagatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    |||||||||||||| ||  ||||   ||| ||||||||||||||||    
T  20061238 aagatgcatcttcttttcggtagctcattccataagaactccacag 20061193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 237 - 386
Target Start/End: Complemental strand, 50002890 - 50002741
Alignment:
Q  237 gacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaa 336  Q
    ||||||||||| ||||||||| |||||| | ||  ||||||||| |||||||| || ||||| ||||||||| ||| |||| | ||||||||||||||||    
T  50002890 gacaatgagcggctcccgacatcttctagaggagccgaatcacatcggaatgagagagatcctgaggccgtgtaggcatgggactgcatggttgaaggaa 50002791  T
Q  337 agcttataagaattgtttggtactacctatatcaacaagatgcatcttct 386  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||    
T  50002790 ggcttataagaattgtttggtactacctatatcaacaagatgcatcttct 50002741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 184 - 395
Target Start/End: Complemental strand, 50003311 - 50003100
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    ||||| ||| |||||||||||||||   ||||| ||| | ||||| |||| | || |||| ||| |||||||||||||||||| ||| ||||||||| ||    
T  50003311 tgtaatacctaaggctgacgagggcagagagtggtcgtcggtgcaaaaggcatgataatgtgcggctcccgacagcttctaaaggaaccgaatcacatcg 50003212  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| |||||||| |||||| ||||||||| | | ||||||||| |||| |  ||||||| ||||||| |||||||||||||||||||||||||||||    
T  50003211 gaatgagagggatcctgaggccatgcaggtataggactgcatggttaaagggagacttataataattgttgggtactacctatatcaacaagatgcatct 50003112  T
Q  384 tctctttagtag 395  Q
    ||| || |||||    
T  50003111 tcttttcagtag 50003100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 300 - 418
Target Start/End: Original strand, 2328341 - 2328459
Alignment:
Q  300 gaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtcta 399  Q
    |||||||| ||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||   |    
T  2328341 gaggccgtacaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatattaacaagatgcatcttctttttggtagcaca 2328440  T
Q  400 tttcataagaactccacag 418  Q
    || ||||||||||||||||    
T  2328441 ttccataagaactccacag 2328459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 184 - 386
Target Start/End: Complemental strand, 31822899 - 31822697
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    ||||||||||| ||||||||| ||||||||| | ||||  ||||| |||| |||| |||||||| ||||| |||||||||| |  || | ||||||| |     
T  31822899 tgtaacacccacggctgacgatggcgaggagcggtcgctggtgcagaaggcacgataatgagcggctcccaacagcttctagagcaaccaaatcacatca 31822800  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| |||||||  ||||||||| |||||||  | | ||||||||||||||   ||||||||||| ||||||||||| ||||||||||| ||||||||    
T  31822799 gaatgagagggatcatgaggccgtgtaggtatgagactacatggttgaaggaagatttataagaattatttggtactacatatatcaacaatatgcatct 31822700  T
Q  384 tct 386  Q
    |||    
T  31822699 tct 31822697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 272 - 418
Target Start/End: Complemental strand, 50002433 - 50002287
Alignment:
Q  272 cgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaa 371  Q
    ||||||||| |||||||| |||||||  ||||||||| ||| |||| | | |||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  50002433 cgaatcacatcggaatgagagggatcatgaggccgtgtaggcatgggactacatggttgaaggaaggcttataagaattgtttggtactacctttatcaa 50002334  T
Q  372 caagatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    ||||||||||||||| ||  ||||   ||| ||||||||||||||||    
T  50002333 caagatgcatcttcttttcggtagctcattccataagaactccacag 50002287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 269 - 386
Target Start/End: Original strand, 2634919 - 2635036
Alignment:
Q  269 aatcgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatat 368  Q
    |||||||||||| |||||||| |||||||  ||||  |||||||||||| | ||||||||||||||| | || ||||||||||||||||||||||||||     
T  2634919 aatcgaatcacatcggaatgagagggatcatgaggttgtgcaggtatgggactgcatggttgaaggataactcataagaattgtttggtactacctatac 2635018  T
Q  369 caacaagatgcatcttct 386  Q
    ||||||||||||||||||    
T  2635019 caacaagatgcatcttct 2635036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 273 - 418
Target Start/End: Complemental strand, 46693883 - 46693737
Alignment:
Q  273 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgc-atggttgaaggaaagcttataagaattgtttggtactacctatatcaa 371  Q
    |||||||| |||||||| ||||||||  ||| |||||| |||||| | ||  ||||||||||||| |||||||| |||||||||||||||||||||||||    
T  46693883 gaatcacatcggaatgagagggatcctaaggtcgtgcatgtatgggactgtgatggttgaaggaaggcttataaaaattgtttggtactacctatatcaa 46693784  T
Q  372 caagatgcatcttctctttagtagtct-atttcataagaactccacag 418  Q
    ||||||||||||||| ||  ||| ||| ||||||||| ||||||||||    
T  46693783 caagatgcatcttcttttcggta-tctcatttcataataactccacag 46693737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 184 - 417
Target Start/End: Original strand, 7548003 - 7548234
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    ||||||||||| | |||||||||||| || |||||| || ||||| |||| |||||||||| || |||| |||| |||| | |  ||  ||||||||  |    
T  7548003 tgtaacacccaggactgacgagggcggggggtgatcaccggtgcacaaggcacgacaatgaacggctcctgacaacttcgaca--aactgaatcacattg 7548100  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
     ||||| |||||||  ||||||||| |||||||  | | |||| || ||||||  ||||||| |||||||||||| || ||||||||||||||||||| |    
T  7548101 caatgagagggatcatgaggccgtgtaggtatgagactacatgattaaaggaagacttataaaaattgtttggtattaactatatcaacaagatgcatat 7548200  T
Q  384 tctctttagtagtctatttcataagaactccaca 417  Q
    ||| ||| |||| | |||| ||||||||||||||    
T  7548201 tctttttggtagcccatttgataagaactccaca 7548234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 183 - 384
Target Start/End: Original strand, 10820501 - 10820702
Alignment:
Q  183 ttgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacacc 282  Q
    ||||| ||||||||||||||||||  | | |||| ||||| ||||| || | | |||||||| || || |||||| |||||| ||||| ||||||||| |    
T  10820501 ttgtaccacccaaggctgacgaggatgggaagtggtcgccggtgcacaaagcatgacaatgaacggctaccgacaacttctagatgaaccgaatcacatc 10820600  T
Q  283 ggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatc 382  Q
    ||| ||| ||||||   ||||| ||| | |||| | | | ||||||||||||||   |||||||||||||||||||||||||||||||| ||||| ||||    
T  10820601 ggagtgagagggattatgaggcggtgtatgtattggactacatggttgaaggaagatttataagaattgtttggtactacctatatcaataagatacatc 10820700  T
Q  383 tt 384  Q
    ||    
T  10820701 tt 10820702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 306 - 415
Target Start/End: Original strand, 16907266 - 16907375
Alignment:
Q  306 gtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcat 405  Q
    ||||||||||| || |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||| || ||| ||| |||  |     
T  16907266 gtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatacatcttcttttcagtggtccattctac 16907365  T
Q  406 aagaactcca 415  Q
    ||||||||||    
T  16907366 aagaactcca 16907375  T

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Target: chr1; HSP #33
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 329 - 418
Target Start/End: Complemental strand, 20060431 - 20060342
Alignment:
Q  329 tgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||   ||| ||||||||||||||||    
T  20060431 tgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacag 20060342  T

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Target: chr1; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 273 - 386
Target Start/End: Original strand, 23180729 - 23180842
Alignment:
Q  273 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 372  Q
    ||||||||  ||||||| |||||||  || |||||| ||| |||| | | | |||||||||||| | |||||||||||| ||||||||||||||||||||    
T  23180729 gaatcacattggaatgagagggatcttgaagccgtgtaggaatgggactacgtggttgaaggaatgattataagaattgcttggtactacctatatcaac 23180828  T
Q  373 aagatgcatcttct 386  Q
    |||||| |||||||    
T  23180829 aagatgtatcttct 23180842  T

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Target: chr1; HSP #35
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 323 - 418
Target Start/End: Original strand, 12728040 - 12728136
Alignment:
Q  323 catggttgaaggaaagcttataagaattgtttgg-tactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    ||||||||||||||  |||||||||||||||||| |||| ||||||||||||||||||||||||| ||  ||||   ||| ||||||||||||||||    
T  12728040 catggttgaaggaagacttataagaattgtttggttactgcctatatcaacaagatgcatcttcttttcggtagcacattccataagaactccacag 12728136  T

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Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 312 - 401
Target Start/End: Complemental strand, 16410831 - 16410742
Alignment:
Q  312 gtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatt 401  Q
    |||||| | ||||| |||||||||||||||||||||||| |||  ||||||| ||| |||||||||||||||| | ||| |||| |||||    
T  16410831 gtatgggaatgcattgttgaaggaaagcttataagaattatttactactaccaataccaacaagatgcatcttgtttttggtagcctatt 16410742  T

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Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 306 - 381
Target Start/End: Complemental strand, 46411248 - 46411173
Alignment:
Q  306 gtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcat 381  Q
    ||||| ||||| ||||||| |||||||| |||  || |||||||| |||||||||||||||||||| |||||||||    
T  46411248 gtgcatgtatgaaattgcacggttgaagaaaaatttttaagaattatttggtactacctatatcaataagatgcat 46411173  T

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Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 331 - 412
Target Start/End: Original strand, 2739578 - 2739660
Alignment:
Q  331 aaggaaag-cttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaact 412  Q
    |||||||| |||||||||||||||| | ||||| ||||||||||| ||| ||||||| |||  ||||||||| ||||||||||    
T  2739578 aaggaaagacttataagaattgtttagcactacatatatcaacaatatgtatcttcttttttatagtctattccataagaact 2739660  T

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Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 319 - 412
Target Start/End: Original strand, 2634511 - 2634604
Alignment:
Q  319 attgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaact 412  Q
    |||||||| || |||||| ||||  |||||||||||||||||| |||||  ||||||||||||||||| ||   |||||||||  |||||||||    
T  2634511 attgcatgattaaaggaaggcttgcaagaattgtttggtactagctatacaaacaagatgcatcttcttttcgatagtctattcaataagaact 2634604  T

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Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 323 - 395
Target Start/End: Complemental strand, 16440676 - 16440604
Alignment:
Q  323 catggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtag 395  Q
    ||||||||||| ||  |||||||||| |||||| ||||||| ||| ||||||||||||| |||| ||| ||||    
T  16440676 catggttgaagaaagacttataagaactgtttgctactaccgataacaacaagatgcatattctttttggtag 16440604  T

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Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 343 - 395
Target Start/End: Complemental strand, 31823161 - 31823109
Alignment:
Q  343 taagaattgtttggtactacctatatcaacaagatgcatcttctctttagtag 395  Q
    |||||||| |||||||||||||||||||| || ||||||||||| ||| ||||    
T  31823161 taagaattatttggtactacctatatcaataaaatgcatcttctttttggtag 31823109  T

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Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 9189351 - 9189384
Alignment:
Q  183 ttgtaacacccaaggctgacgagggcgaggagtg 216  Q
    ||||||||||||||||||||||||||| ||||||    
T  9189351 ttgtaacacccaaggctgacgagggcggggagtg 9189384  T

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Target: chr2 (Bit Score: 136; Significance: 1e-70; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 183 - 418
Target Start/End: Complemental strand, 25338234 - 25337999
Alignment:
Q  183 ttgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacacc 282  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||| |||| ||||||||||||| |||| ||||||||||| | |||  ||||||||||    
T  25338234 ttgtaacacccaaggctgacgagggcgaggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaactgaatcacacc 25338135  T
Q  283 ggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatc 382  Q
    ||||||| |||| ||| |||| ||||||||||||| | |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  25338134 ggaatgagagggttcctgaggtcgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatc 25338035  T
Q  383 ttctctttagtagtctatttcataagaactccacag 418  Q
    |||| ||   |||   ||||||||||||||||||||    
T  25338034 ttcttttcgatagctcatttcataagaactccacag 25337999  T

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Target: chr2; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 184 - 418
Target Start/End: Original strand, 33174868 - 33175102
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    |||||||||||||||||||||||||| |||||| ||||| ||||| |||| | ||||||||| | ||||||||| |||||| |  |  ||||||||| ||    
T  33174868 tgtaacacccaaggctgacgagggcggggagtggtcgccggtgcacaaggcatgacaatgagtggctcccgacaacttctagacaagccgaatcacatcg 33174967  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| |||||||| ||||||||| |||||||| | | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  33174968 gaatgagagggatcctgaggccgtgtaggtatgggactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatct 33175067  T
Q  384 tctctttagtagtctatttcataagaactccacag 418  Q
    ||| ||| ||||   ||||||||||||||||||||    
T  33175068 tctttttggtagctcatttcataagaactccacag 33175102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 183 - 418
Target Start/End: Complemental strand, 25434293 - 25434058
Alignment:
Q  183 ttgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacacc 282  Q
    ||||||||| ||||||||||||||||| ||||||  |||| ||||| |||| ||||||||||||| |||| ||||||||||||| ||| |||||||||||    
T  25434293 ttgtaacacacaaggctgacgagggcggggagtggccgccggtgcacaaggcacgacaatgagcggctcctgacagcttctaaacgaaccgaatcacacc 25434194  T
Q  283 ggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatc 382  Q
    ||||||| |||||||| |||||||||| ||||||| | | |||||||||||||| |||||||||||||||||| ||| |||| |||||||||||||||||    
T  25434193 ggaatgagagggatcctgaggccgtgctggtatgggacttcatggttgaaggaaggcttataagaattgtttgatacaacctttatcaacaagatgcatc 25434094  T
Q  383 ttctctttagtagtctatttcataagaactccacag 418  Q
    | || | | |||| | ||| ||||||||||||||||    
T  25434093 tcctttctggtagcccattccataagaactccacag 25434058  T

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Target: chr2; HSP #4
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 183 - 418
Target Start/End: Original strand, 29804591 - 29804826
Alignment:
Q  183 ttgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacacc 282  Q
    |||||||||||||||||||||||| || |||||| ||||| ||||| |||| |||| |||||||| |||||||||||||||| | ||||||||||||| |    
T  29804591 ttgtaacacccaaggctgacgaggacggggagtggtcgccggtgcacaaggcacgataatgagcggctcccgacagcttctagaggaatcgaatcacatc 29804690  T
Q  283 ggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatc 382  Q
    ||||||| |||||||| |||||| || |||||||| | | |||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||    
T  29804691 ggaatgagagggatcctgaggccttgtaggtatgggactacatggttgaaggcaggcttataagaattgttgggtactacctatatcaacaagatgcatc 29804790  T
Q  383 ttctctttagtagtctatttcataagaactccacag 418  Q
    |||| ||  ||||   ||| ||||||||||||||||    
T  29804791 ttcttttcggtagctcattccataagaactccacag 29804826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 184 - 418
Target Start/End: Original strand, 41754199 - 41754433
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    |||||||||||||| ||||||||||| |||||| ||||| ||||| |||| ||||||||||||| |||| ||||||||||| | |||  |||||||||||    
T  41754199 tgtaacacccaaggatgacgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaactgaatcacaccg 41754298  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| |||| ||  |||||||||||||||||  | |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  41754299 gaatgagagggttcttgaggccgtgcaggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactatctatatcaacaagatgcatct 41754398  T
Q  384 tctctttagtagtctatttcataagaactccacag 418  Q
    ||| ||  ||||   ||| ||||||||||||||||    
T  41754399 tcttttcggtagctcattccataagaactccacag 41754433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 184 - 418
Target Start/End: Original strand, 8256436 - 8256670
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    |||||||||||||||||||||||| | |||||  ||||| ||||| |||| ||||||||||||| |||||||||||||||| | ||||| |||||| |||    
T  8256436 tgtaacacccaaggctgacgagggtggggagtagtcgccggtgcacaaggcacgacaatgagcggctcccgacagcttctagaggaatcaaatcacgccg 8256535  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| |||||||  || ||| || |||||||| | | |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  8256536 gaatgagagggatcttgaagccttgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatct 8256635  T
Q  384 tctctttagtagtctatttcataagaactccacag 418  Q
    ||| ||  ||||   ||| ||||||||||||||||    
T  8256636 tcttttcggtagctcattccataagaactccacag 8256670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 183 - 415
Target Start/End: Complemental strand, 18099116 - 18098883
Alignment:
Q  183 ttgtaacacccaaggctgacgagggc-gaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacac 281  Q
    |||||||||||| ||||||||||||| | |||||||||||| ||||| |||| ||||||||||||  ||||||||||||| || | ||| |||||||||     
T  18099116 ttgtaacacccacggctgacgagggcaggggagtgatcgccggtgcacaaggcacgacaatgagcagctcccgacagcttatagaggaaccgaatcacat 18099017  T
Q  282 cggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcat 381  Q
    |||||||| ||| |||| ||||||||| |||||||  | | |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  18099016 cggaatgagaggaatcctgaggccgtgtaggtatgagactacatggttgaagggatgcttataagaattgtttggtactacctatatcaacaagatgcat 18098917  T
Q  382 cttctctttagtagtctatttcataagaactcca 415  Q
    ||||| ||| ||||   ||| |||||||||||||    
T  18098916 cttctttttggtagctcattccataagaactcca 18098883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 184 - 418
Target Start/End: Original strand, 16379302 - 16379537
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgagg-agtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacacc 282  Q
    ||||||||||| |||||||||| || ||| |||| ||||| ||||| |||| ||||||||||||  ||||| |||| || |||| ||| ||||||| |      
T  16379302 tgtaacacccacggctgacgagagcaagggagtggtcgccggtgcacaaggcacgacaatgagcagctcccaacagtttataaacgaaccgaatcaaatt 16379401  T
Q  283 ggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatc 382  Q
    ||||||| ||||||||||||||||||||||||||| | ||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||||    
T  16379402 ggaatgagagggatcccgaggccgtgcaggtatgggactgcatggttgaaggaagacttatacgaattgtttggtactacctatatcaacaagatgcatc 16379501  T
Q  383 ttctctttagtagtctatttcataagaactccacag 418  Q
    |||| ||| ||||   ||| ||||||||||||||||    
T  16379502 ttctttttggtagcacattccataagaactccacag 16379537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 184 - 417
Target Start/End: Complemental strand, 27883162 - 27882929
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    ||||||| ||||||||||||||| || |||||| ||||| ||||| |||| ||||||||||||| |||||| ||| ||||| | | | ||||||||||||    
T  27883162 tgtaacatccaaggctgacgaggacggggagtggtcgccggtgcacaaggcacgacaatgagcggctcccgtcagattctacacgtaccgaatcacaccg 27883063  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
     ||||| |||||||| ||||||||||| |||||  | ||||| |||||||||| ||||||||||||||||||||| || ||||||||| |||||||||||    
T  27883062 aaatgagagggatcctgaggccgtgcatgtatgagactgcattgttgaaggaatgcttataagaattgtttggtattatctatatcaataagatgcatct 27882963  T
Q  384 tctctttagtagtctatttcataagaactccaca 417  Q
    ||| ||| |||| |  || |||||||||||||||    
T  27882962 tcttttttgtaggccgttccataagaactccaca 27882929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 184 - 418
Target Start/End: Original strand, 33770920 - 33771145
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    |||||||||||||||||||||||||| |||||| ||||| ||||| |||| ||||||||||||| |||| ||||||||||| | |||  |||||||||||    
T  33770920 tgtaacacccaaggctgacgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaactgaatcacaccg 33771019  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| |||| ||| ||||         ||||| | |||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  33771020 gaatgagagggttcctgagg---------tatgggactgcagggttgaagaaaggcttataagaattgtttggtactacctatatcaacaagatgcatct 33771110  T
Q  384 tctctttagtagtctatttcataagaactccacag 418  Q
    ||| ||  ||||   ||||||||||||||||||||    
T  33771111 tcttttcggtagctcatttcataagaactccacag 33771145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 181 - 386
Target Start/End: Original strand, 15619805 - 15620010
Alignment:
Q  181 cattgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcaca 280  Q
    |||||||||||||||| |||| ||| ||| |||||| ||||| ||||| |||| ||||||||||||| ||||||| ||||| || | ||| ||||| |||    
T  15619805 cattgtaacacccaagactgatgagagcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcccgatagcttatagacgaaccgaattaca 15619904  T
Q  281 ccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgca 380  Q
     | |||||| ||||||||||| |||||||| |||||  | ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| ||    
T  15619905 tcagaatgagagggatcccgatgccgtgcaagtatgagactgcatagttgaaggcaagcttataagaattgtttggtactacctatatcaacaagataca 15620004  T
Q  381 tcttct 386  Q
    ||||||    
T  15620005 tcttct 15620010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 187 - 418
Target Start/End: Original strand, 1706955 - 1707185
Alignment:
Q  187 aacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaa 286  Q
    ||||||||||||| ||||||||| |||||| ||| | ||||| |||| ||||||||||||| |||||||||  ||||| | ||| ||||||||| |||||    
T  1706955 aacacccaaggctaacgagggcggggagtggtcgtcggtgcacaaggcacgacaatgagcggctcccgacaatttctagaggaaccgaatcacatcggaa 1707054  T
Q  287 tgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttct 386  Q
    ||| ||| |||| ||| | ||| |||||||  | | |||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  1707055 tgagagg-atcctgagactgtgtaggtatgagactacatgattgaaggaagacttataagaattgtttggtactacctatatcaacaagatgcatcttct 1707153  T
Q  387 ctttagtagtctatttcataagaactccacag 418  Q
     ||| |||| | || |||||||||||||||||    
T  1707154 ttttggtagcccatctcataagaactccacag 1707185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 184 - 414
Target Start/End: Original strand, 33174415 - 33174643
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    ||||| |||||||||| |||| |||| |||||| ||||| |||||   || | ||||||||||| |||||||||||||||| | ||| ||||||||| ||    
T  33174415 tgtaatacccaaggctaacgaaggcggggagtggtcgccggtgcaaggggcatgacaatgagcggctcccgacagcttctagacgaaccgaatcacatcg 33174514  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| |||||||| || |||||| |||||||| | | ||  |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  33174515 gaatgagagggatcctgatgccgtgtaggtatgggactaca--gttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatct 33174612  T
Q  384 tctctttagtagtctatttcataagaactcc 414  Q
    ||| ||  |||| | ||| ||||||||||||    
T  33174613 tcttttcggtagcccattccataagaactcc 33174643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 188 - 384
Target Start/End: Complemental strand, 18448150 - 18447954
Alignment:
Q  188 acacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaat 287  Q
    ||||| ||||||| |||||||| |||||| ||||| ||||| |||| |||||||||||||  |||||||||||| || | ||| ||||||||| ||||||    
T  18448150 acacctaaggctggcgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggttcccgacagcttttagaggaaccgaatcacatcggaat 18448051  T
Q  288 gatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatctt 384  Q
    ||||||||||| ||||||||| |||||||  | | ||||||||||| ||  |||||||||||||||||||||||| | |||||||||||||||||||    
T  18448050 gatagggatcctgaggccgtgtaggtatgtgactacatggttgaagtaagacttataagaattgtttggtactacttgtatcaacaagatgcatctt 18447954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 184 - 418
Target Start/End: Original strand, 1912434 - 1912668
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgagg-agtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacacc 282  Q
    ||||||||||| || |||||||| | ||| |||||||||||||||| |||||||||||||||||| ||| | ||||||| || | |||  |||||||| |    
T  1912434 tgtaacacccacggttgacgaggacaagggagtgatcgccagtgcacaaggtacgacaatgagcggctctcaacagcttttagaggaactgaatcacatc 1912533  T
Q  283 ggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatc 382  Q
    ||||||| |||||||| ||||   || |||||||  | | |||||||||| | |   |||||||||||||||||||||||||||||||||||||||||||    
T  1912534 ggaatgagagggatcctgaggttatgtaggtatgagactacatggttgaaagtagatttataagaattgtttggtactacctatatcaacaagatgcatc 1912633  T
Q  383 ttctctttagtagtctatttcataagaactccacag 418  Q
    |||| ||| |||| | ||| ||||||||||||||||    
T  1912634 ttct-tttggtagcccattccataagaactccacag 1912668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 213 - 418
Target Start/End: Original strand, 16378877 - 16379081
Alignment:
Q  213 agtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatgatagggatcccgaggccgtgcagg 312  Q
    |||| ||||| |||||||||  |||||||||||||  |||  |||| || || ||||| ||| |||||||||||||| |||||| ||||||||||||| |    
T  16378877 agtggtcgccggtgcataagacacgacaatgagcggttcctaacagtttatagatgaaccga-tcacaccggaatgagagggattccgaggccgtgcaag 16378975  T
Q  313 tatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaact 412  Q
    ||||  | ||||||||||||||||  |||||| |||||||||| |||||||||||||||||||||||||||||| ||| ||||   ||| ||||||||||    
T  16378976 tatgagactgcatggttgaaggaagtcttatacgaattgtttgatactacctatatcaacaagatgcatcttctttttggtagcacattccataagaact 16379075  T
Q  413 ccacag 418  Q
    ||||||    
T  16379076 ccacag 16379081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 273 - 386
Target Start/End: Original strand, 30966233 - 30966346
Alignment:
Q  273 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 372  Q
    ||||| || |||||||| |||||||| |||||||| ||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  30966233 gaatcgcatcggaatgagagggatcctgaggccgtacaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaac 30966332  T
Q  373 aagatgcatcttct 386  Q
    ||||||||||||||    
T  30966333 aagatgcatcttct 30966346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 273 - 418
Target Start/End: Original strand, 24818325 - 24818470
Alignment:
Q  273 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 372  Q
    |||||||| |||||||| |||||||| ||||||||||| |||||| | ||||||||| |||||| ||||||||||||||||| |||||||||||||||||    
T  24818325 gaatcacatcggaatgagagggatcctgaggccgtgcatgtatgggactgcatggttcaaggaaggcttataagaattgtttagtactacctatatcaac 24818424  T
Q  373 aagatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    |||||||||||| | ||  ||||   ||| ||||||||||||||||    
T  24818425 aagatgcatctttttttcggtagctcattccataagaactccacag 24818470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 273 - 418
Target Start/End: Original strand, 30966689 - 30966834
Alignment:
Q  273 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 372  Q
    ||||| || |||||||| |||||||| |||||||| || |||||| | |||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  30966689 gaatcgcatcggaatgagagggatcctgaggccgtacatgtatgggactgcatggttgaaggaaggattataagaattgtttggtactacctatatcaac 30966788  T
Q  373 aagatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    |||||||||||||| ||  ||||   ||| ||||||||||||||||    
T  30966789 aagatgcatcttcttttcggtagctcattccataagaactccacag 30966834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 181 - 386
Target Start/End: Original strand, 15639647 - 15639846
Alignment:
Q  181 cattgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcaca 280  Q
    |||||||||||||||| |||| ||| ||| |||||| ||||| ||||| |||| ||||||||||||| ||||||| ||||| || | ||| ||||| |||    
T  15639647 cattgtaacacccaagactgatgagagcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcccgatagcttatagacgaaccgaattaca 15639746  T
Q  281 ccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgca 380  Q
     | |||||| |||||||||||||| ||| | |||      ||||| |||||||| | ||||||| ||||||||||||||||||||||||||||| || ||    
T  15639747 tcagaatgagagggatcccgaggctgtggaagta------tgcatagttgaaggcacgcttataggaattgtttggtactacctatatcaacaacataca 15639840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 184 - 418
Target Start/End: Complemental strand, 38899148 - 38898914
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    |||||||| |||| |||||||||||| |||||| |||   |||||||||  | || |||||| | ||||||||| |||||| |  |  | ||||||| ||    
T  38899148 tgtaacactcaagactgacgagggcggggagtggtcgttggtgcataagacatgaaaatgagtggctcccgacaacttctagacaagccaaatcacatcg 38899049  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    ||| || || ||||  ||||||||| ||||||   | | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |    
T  38899048 gaaggagagtgatcttgaggccgtgtaggtatcagactacatggttgaaggagagcttataagaattgtttggtactacctatatcaacaagatgcattt 38898949  T
Q  384 tctctttagtagtctatttcataagaactccacag 418  Q
    ||| ||| |||    ||||||||||||||||||||    
T  38898948 tctttttggtaacacatttcataagaactccacag 38898914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 272 - 397
Target Start/End: Original strand, 1953153 - 1953278
Alignment:
Q  272 cgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaa 371  Q
    ||||||||| |||||||| |||||||| || | ||||||||||||  | ||||||||||||||||  | |||||||||||||||||||||||||||||||    
T  1953153 cgaatcacatcggaatgagagggatcctgaagtcgtgcaggtatgagactgcatggttgaaggaagacctataagaattgtttggtactacctatatcaa 1953252  T
Q  372 caagatgcatcttctctttagtagtc 397  Q
    | ||||||||||||| ||| ||||||    
T  1953253 ctagatgcatcttctttttggtagtc 1953278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 273 - 412
Target Start/End: Complemental strand, 29259767 - 29259628
Alignment:
Q  273 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 372  Q
    |||||||| |||||||| |||||||| ||| |||| || |||||| | |||||||||||||||| |||||| | |||||||||||||||| |||||||||    
T  29259767 gaatcacatcggaatgagagggatcctgagaccgtacaagtatgggactgcatggttgaaggaaggcttattaaaattgtttggtactacatatatcaac 29259668  T
Q  373 aagatgcatcttctctttagtagtctatttcataagaact 412  Q
    |||||||||||||| ||  ||||   ||||||||||||||    
T  29259667 aagatgcatcttcttttcggtagctcatttcataagaact 29259628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 273 - 386
Target Start/End: Complemental strand, 5399964 - 5399851
Alignment:
Q  273 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 372  Q
    |||||||| |||||||| |||||||  |||| |||||| |||||| | || |||||| |||| | |||||||||||||||||||||||||||||||||||    
T  5399964 gaatcacatcggaatgagagggatcttgaggtcgtgcaagtatgggagtgtatggtttaagggaggcttataagaattgtttggtactacctatatcaac 5399865  T
Q  373 aagatgcatcttct 386  Q
    ||||||||||||||    
T  5399864 aagatgcatcttct 5399851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 276 - 417
Target Start/End: Original strand, 20502023 - 20502165
Alignment:
Q  276 tcacaccggaatgatagggatcccga--ggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaaca 373  Q
    |||||||||||||| ||||||||| |  || |||||| |||||| | |||||||||||||||| |||||||||||||||||||||||  |||||||||||    
T  20502023 tcacaccggaatgagagggatcccaaaaggtcgtgcaagtatgggactgcatggttgaaggaaggcttataagaattgtttggtactttctatatcaaca 20502122  T
Q  374 agatgcatcttctctttagtagtctatttcataagaactccaca 417  Q
    |||||| |||| | ||| |||| | |||||||||||||| ||||    
T  20502123 agatgcttctt-tttttggtagcccatttcataagaacttcaca 20502165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 184 - 314
Target Start/End: Complemental strand, 18098798 - 18098667
Alignment:
Q  184 tgtaacacccaaggctgacgagggc-gaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacacc 282  Q
    ||||||||||| ||||||||||||| | |||||||||||| ||||| |||| |||||| |||||| ||||||||||||| || | ||||||||||||| |    
T  18098798 tgtaacacccacggctgacgagggcaggggagtgatcgccggtgcacaaggcacgacattgagcggctcccgacagcttatagaggaatcgaatcacatc 18098699  T
Q  283 ggaatgatagggatcccgaggccgtgcaggta 314  Q
    ||||||| ||| | || ||||||||| |||||    
T  18098698 ggaatgagaggaaccctgaggccgtgtaggta 18098667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 283 - 386
Target Start/End: Complemental strand, 30963857 - 30963754
Alignment:
Q  283 ggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatc 382  Q
    ||||||| |||||||  || |||||||||||| |  | ||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||||||    
T  30963857 ggaatgagagggatcatgaagccgtgcaggtaagagaatgcatggttgaaggaaaacttataagaattgtatggttctacctatatcaacaagatgcatc 30963758  T
Q  383 ttct 386  Q
    ||||    
T  30963757 ttct 30963754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 272 - 418
Target Start/End: Original strand, 11388187 - 11388331
Alignment:
Q  272 cgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaa 371  Q
    ||||||||| |||||||| ||| |||| || |||||| |||||||  | | |||||||||||||| ||||| || |||||||||||||||||||||||||    
T  11388187 cgaatcacatcggaatgagagg-atcctgatgccgtgtaggtatgagactacatggttgaaggaatgcttaaaa-aattgtttggtactacctatatcaa 11388284  T
Q  372 caagatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    ||||||||||||||| ||  ||||   ||| ||||||||||||||||    
T  11388285 caagatgcatcttcttttcggtagctcattccataagaactccacag 11388331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 321 - 415
Target Start/End: Original strand, 13191021 - 13191115
Alignment:
Q  321 tgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactcca 415  Q
    ||||||||| ||||||  |||||||||||||||||||||||| |||| |||||||||||||||||| ||| |||||| |||| ||||||||||||    
T  13191021 tgcatggttcaaggaagacttataagaattgtttggtactacatataccaacaagatgcatcttctttttggtagtccattttataagaactcca 13191115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 326 - 415
Target Start/End: Original strand, 8073944 - 8074033
Alignment:
Q  326 ggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactcca 415  Q
    ||||||||| |  ||||||||||||||||||||||||||||| |||||||||||||||||| | | |||| | |||||||||||||||||    
T  8073944 ggttgaagggagacttataagaattgtttggtactacctataccaacaagatgcatcttctttcttgtagcccatttcataagaactcca 8074033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 293 - 418
Target Start/End: Original strand, 11394554 - 11394677
Alignment:
Q  293 ggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttag 392  Q
    |||||| || |||||| |||||||  | | |||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||| ||  |    
T  11394554 ggatcctgatgccgtgtaggtatgagactacatggttgaaggaatgcttaaaa-aattgtttggtactacctatatcaacaagatgcatcttcttttcgg 11394652  T
Q  393 tagtctatttcataagaactccacag 418  Q
    ||| ||||| |||||||||| |||||    
T  11394653 tag-ctattccataagaacttcacag 11394677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 321 - 384
Target Start/End: Complemental strand, 30963362 - 30963299
Alignment:
Q  321 tgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatctt 384  Q
    |||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  30963362 tgcatgattgaaggaaggcttataagaattgttaggtactacctatatcaacaagatgcatctt 30963299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 269 - 381
Target Start/End: Complemental strand, 30962042 - 30961922
Alignment:
Q  269 aatcgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaagga-------aag-cttataagaattgtttggtact 360  Q
    |||||||||||| | |||||| || ||||| || |||||| |||||||| |||||||||||||||||       ||| ||||||||| ||| ||||||||    
T  30962042 aatcgaatcacatcagaatgagagagatcctgaagccgtgtaggtatgggattgcatggttgaaggatttaaggaagtcttataagatttgattggtact 30961943  T
Q  361 acctatatcaacaagatgcat 381  Q
    |||||||||||||||||||||    
T  30961942 acctatatcaacaagatgcat 30961922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 285 - 418
Target Start/End: Original strand, 83028 - 83161
Alignment:
Q  285 aatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatctt 384  Q
    ||||| |||||||| |||   |||||||||||  | | |||||||||||| | |||||||||||| ||||||||||||||||| |||||||||| |||||    
T  83028 aatgagagggatcctgagattgtgcaggtatgagactacatggttgaaggtatgcttataagaatcgtttggtactacctataccaacaagatgaatctt 83127  T
Q  385 ctctttagtagtctatttcataagaactccacag 418  Q
     | ||| ||||   ||| ||||||||||| ||||    
T  83128 ttttttggtagctcattccataagaactctacag 83161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 255 - 384
Target Start/End: Original strand, 16541966 - 16542095
Alignment:
Q  255 acagcttctaaatgaatcgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgttt 354  Q
    ||||||||||  |||  ||||||||| | ||||||||||||||||   || ||| |||||||    | ||||||||||||||  ||||||| ||||||||    
T  16541966 acagcttctaggtgagccgaatcacatcagaatgatagggatcccagagctgtgtaggtatgactctacatggttgaaggaagacttataataattgttt 16542065  T
Q  355 ggtactacctatatcaacaagatgcatctt 384  Q
     ||||||||||||||||||||||| |||||    
T  16542066 tgtactacctatatcaacaagatgtatctt 16542095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 325 - 377
Target Start/End: Complemental strand, 8181446 - 8181394
Alignment:
Q  325 tggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagat 377  Q
    ||||||||||||  ||| |||||||||||||||||||||||||||||||||||    
T  8181446 tggttgaaggaagacttttaagaattgtttggtactacctatatcaacaagat 8181394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 325 - 386
Target Start/End: Complemental strand, 36924519 - 36924456
Alignment:
Q  325 tggttgaaggaaagcttataagaattgtttggtactac--ctatatcaacaagatgcatcttct 386  Q
    |||||||||||| ||||||||||||||||||||| |||   |||||||||||||||||||||||    
T  36924519 tggttgaaggaaggcttataagaattgtttggtattacttatatatcaacaagatgcatcttct 36924456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 331 - 385
Target Start/End: Complemental strand, 26864905 - 26864851
Alignment:
Q  331 aaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttc 385  Q
    |||||| |||| |||||| | |||||||||||||| ||| |||||||||||||||    
T  26864905 aaggaaggcttgtaagaactctttggtactacctacatcgacaagatgcatcttc 26864851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 128; Significance: 6e-66; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 183 - 386
Target Start/End: Original strand, 39653073 - 39653276
Alignment:
Q  183 ttgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacacc 282  Q
    |||||||||||||||||||||||| || |||||| ||||| ||||| |||| ||||||||||||| |||| ||||||||||| | |||  ||||||||||    
T  39653073 ttgtaacacccaaggctgacgaggacggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaactgaatcacacc 39653172  T
Q  283 ggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatc 382  Q
    ||||||| |||| ||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  39653173 ggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaagcttataagaattgttggatactacctatatcaacaagatgcatc 39653272  T
Q  383 ttct 386  Q
    ||||    
T  39653273 ttct 39653276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 184 - 418
Target Start/End: Complemental strand, 11180269 - 11180036
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    |||||||||||||||||| ||||||| |||||| ||||| ||||| |||||||||||||||||| |||||||||||||||| | ||| |||||||  |||    
T  11180269 tgtaacacccaaggctgaagagggcggggagtggtcgccggtgcacaaggtacgacaatgagcggctcccgacagcttctagaggaaccgaatcag-ccg 11180171  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| |||||||| |||||| || |||||||| | | |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  11180170 gaatgagagggatcctgaggccttgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatct 11180071  T
Q  384 tctctttagtagtctatttcataagaactccacag 418  Q
    ||| ||  ||||   ||||||||||||||||||||    
T  11180070 tcttttcggtagctcatttcataagaactccacag 11180036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 184 - 418
Target Start/End: Original strand, 28561656 - 28561890
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    ||||||||||||| |||||||||||| |||||| ||||| ||||| |||| ||||||||||||| || | |||| |||||| | |||  |||||||||||    
T  28561656 tgtaacacccaagactgacgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctactgacaacttctagaggaactgaatcacaccg 28561755  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| |||| ||| |||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  28561756 gaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatct 28561855  T
Q  384 tctctttagtagtctatttcataagaactccacag 418  Q
    ||| ||  ||||   ||| ||||||||||||||||    
T  28561856 tcttttcggtagctcattccataagaactccacag 28561890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 186 - 418
Target Start/End: Original strand, 50347658 - 50347890
Alignment:
Q  186 taacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccgga 285  Q
    |||||||||||||||||||||||| |||||||||||| ||||| |||| ||||||||||||| |||||||||||||||| | ||| |||||||| |||||    
T  50347658 taacacccaaggctgacgagggcggggagtgatcgccggtgcacaaggaacgacaatgagcggctcccgacagcttctagaggaaccgaatcacgccgga 50347757  T
Q  286 atgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttc 385  Q
    |||| |||||||| |||||| || | |||||  | | | |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  50347758 atgagagggatcctgaggccttgtatgtatgagactacttggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttc 50347857  T
Q  386 tctttagtagtctatttcataagaactccacag 418  Q
    | ||| ||||   ||| ||||||||||||||||    
T  50347858 tttttggtagctcattccataagaactccacag 50347890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 184 - 386
Target Start/End: Original strand, 16811291 - 16811493
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    |||||||||||||||||||||||| | |||||| ||||| ||||| |||| ||||||||||||| |||||||||||||||| | ||||||||||||| ||    
T  16811291 tgtaacacccaaggctgacgagggtggggagtggtcgccggtgcacaaggcacgacaatgagcggctcccgacagcttctagaggaatcgaatcacatcg 16811390  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| |||||||| ||||||||| |||| ||| | | |||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||    
T  16811391 gaatgagagggatcctgaggccgtgtaggtttgggactccatggttgaaggaaggcttataagaattgttgggtactacctatttcaacaagatgcatct 16811490  T
Q  384 tct 386  Q
    |||    
T  16811491 tct 16811493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 184 - 418
Target Start/End: Complemental strand, 13150334 - 13150101
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    |||||||||||||||||| ||||||| |||||| ||||| ||||| |||| ||||||||||||| ||| |||||||||||| | ||| |||||||| |||    
T  13150334 tgtaacacccaaggctgatgagggcggggagtg-tcgccggtgcacaaggcacgacaatgagcggctctcgacagcttctagaggaaccgaatcacgccg 13150236  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| |||| ||| |||||| || |||||||| | | |||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||    
T  13150235 gaatgagagggctcctgaggccttgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctgtatcaacaagatgcatct 13150136  T
Q  384 tctctttagtagtctatttcataagaactccacag 418  Q
    ||| || |||||   ||| ||||||||||||||||    
T  13150135 tcttttcagtagctcattccataagaactccacag 13150101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 197 - 418
Target Start/End: Complemental strand, 32227444 - 32227223
Alignment:
Q  197 gctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatgatagggat 296  Q
    ||||||||||||| |||||| ||||||||||| |||| || |||||||||| ||||| ||| |||||| | ||| |||||||| ||||||||| ||||||    
T  32227444 gctgacgagggcggggagtggtcgccagtgcacaaggcacaacaatgagcggctcccaacaacttctagaggaaccgaatcacgccggaatgagagggat 32227345  T
Q  297 cccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagt 396  Q
    ||  ||||| || |||||||| | | |||||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||| ||| ||||     
T  32227344 cctaaggccttgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatattaacaagatgcatcttctttttggtagc 32227245  T
Q  397 ctatttcataagaactccacag 418  Q
      ||||||||||||||||||||    
T  32227244 tcatttcataagaactccacag 32227223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 182 - 386
Target Start/End: Original strand, 14813857 - 14814061
Alignment:
Q  182 attgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacac 281  Q
    |||||||||| |||||||||||||||||||||||| ||||| ||||| |||| |||||||| |||| || | || |||||||| | ||| ||||||||||    
T  14813857 attgtaacacacaaggctgacgagggcgaggagtggtcgccggtgcacaaggcacgacaattagcggcttctgagagcttctagaggaaccgaatcacac 14813956  T
Q  282 cggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcat 381  Q
    |||||||| |||| ||| ||||||||| |||||||  | ||||||||| |||||| |||||||| ||||||||||||||||||||||||| |||||||||    
T  14813957 cggaatgagagggttcctgaggccgtgtaggtatgagactgcatggttaaaggaaggcttataataattgtttggtactacctatatcaataagatgcat 14814056  T
Q  382 cttct 386  Q
    |||||    
T  14814057 cttct 14814061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 189 - 386
Target Start/End: Original strand, 16810840 - 16811037
Alignment:
Q  189 cacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatg 288  Q
    |||| |||||||||||||||| |||||| ||||| ||||| |||| ||||||||||||| |||||||||||||||| | ||||||||||||| |||||||    
T  16810840 caccgaaggctgacgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcccgacagcttctagaggaatcgaatcacatcggaatg 16810939  T
Q  289 atagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttct 386  Q
    | |||||||  ||||||||| || ||||| | ||||||||||| |||| ||||||||||||||||  |||||| ||||||| ||||||||||||||||    
T  16810940 agagggatcttgaggccgtgtagatatgggactgcatggttgatggaaggcttataagaattgttgcgtactaactatatctacaagatgcatcttct 16811037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 184 - 418
Target Start/End: Original strand, 37044944 - 37045179
Alignment:
Q  184 tgtaacacccaaggctgacgagggc-gaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacacc 282  Q
    |||||||||||  |||||||||||| | |||||| || || ||||| |||| ||| ||||||||| |||||||||||||||| | ||| ||||||||| |    
T  37044944 tgtaacacccacagctgacgagggcaggggagtggtcaccggtgcacaaggcacgccaatgagcggctcccgacagcttctagaggaaccgaatcacatc 37045043  T
Q  283 ggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatc 382  Q
     |||||| |||||||| ||||||||| |||| ||| | | ||||  |||||||| ||||||||||||||||||||| |||||||||||||||| ||||||    
T  37045044 tgaatgagagggatcctgaggccgtgtaggtgtgggactacatgaatgaaggaatgcttataagaattgtttggtaatacctatatcaacaaggtgcatc 37045143  T
Q  383 ttctctttagtagtctatttcataagaactccacag 418  Q
    |||| ||| |||  ||||| ||||||||||||||||    
T  37045144 ttctttttggtaccctattccataagaactccacag 37045179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 195 - 412
Target Start/End: Original strand, 30529608 - 30529825
Alignment:
Q  195 aggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatgataggg 294  Q
    |||||||||||||||| ||||| ||| ||||||| |||| |||||||| |||  ||||||||| |||||| | |||  |||||||| |||||||| ||||    
T  30529608 aggctgacgagggcgatgagtggtcgtcagtgcacaaggcacgacaataagcagctcccgacaacttctagaggaactgaatcacatcggaatgagaggg 30529707  T
Q  295 atcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagta 394  Q
    |||| ||||| ||| |||||||  | | ||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||    
T  30529708 atcctgaggctgtgtaggtatgagactacatggttgaagtaaggcttataagaattttttggtactacctatatcaacaagatgcatcttctttttggta 30529807  T
Q  395 gtctatttcataagaact 412  Q
    | | ||| ||||||||||    
T  30529808 gcccattccataagaact 30529825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 183 - 418
Target Start/End: Complemental strand, 32797171 - 32796937
Alignment:
Q  183 ttgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacacc 282  Q
    ||||||||||||||||| ||||||||| |||||| ||||| ||||| ||| || |||||||| || |||||||||||||||| |  |  ||||||||| |    
T  32797171 ttgtaacacccaaggctaacgagggcgtggagtggtcgccggtgcacaag-tatgacaatgaacggctcccgacagcttctagacaagccgaatcacatc 32797073  T
Q  283 ggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatc 382  Q
    | ||| | |||||||| ||| || || ||||||| || | ||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||    
T  32797072 gaaataagagggatcctgagaccatgtaggtatgaaactacatggttgaagcaagacttataagaattgtttggtactacctatatcaacaagatgcatc 32796973  T
Q  383 ttctctttagtagtctatttcataagaactccacag 418  Q
    |||| ||| ||||   ||| ||||||||||||||||    
T  32796972 ttcttttttgtagcacattccataagaactccacag 32796937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 244 - 418
Target Start/End: Complemental strand, 25239253 - 25239079
Alignment:
Q  244 agcgactcccgacagcttctaaatgaatcgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttat 343  Q
    |||| |||||||||||||||| | ||||||||||||||||| |||| |||||| | |||| |||| |||||||| | |  ||||||||||||| ||||||    
T  25239253 agcggctcccgacagcttctagaggaatcgaatcacaccggtatgagagggattctgaggtcgtgtaggtatgggactatatggttgaaggaacgcttat 25239154  T
Q  344 aagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||| |||| | ||| ||||||||||||||||    
T  25239153 aagaattttttggtactacctatatcaacaagatgcatcttctttttggtagcccattccataagaactccacag 25239079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 187 - 418
Target Start/End: Complemental strand, 25230482 - 25230250
Alignment:
Q  187 aacacccaaggctgacgagggcgagg-agtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccgga 285  Q
    ||||||||  |||||||||||  ||| |||||| ||| ||||| |||| ||||||||||||| ||||||||| ||| || | ||| | ||||||| ||||    
T  25230482 aacacccacagctgacgagggaaagggagtgatagccggtgcacaaggcacgacaatgagcggctcccgacatcttatagaggaaccaaatcacatcgga 25230383  T
Q  286 atgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttc 385  Q
    | || |||||||| |||| |||| |||||||| | | |||||||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||    
T  25230382 aggagagggatcctgaggtcgtgtaggtatgggactacatggttgaaggaaggcttataagaattatttggtactacctatatcaacaagatacatcttc 25230283  T
Q  386 tctttagtagtctatttcataagaactccacag 418  Q
    | ||| |||| | |||  |||||||||||||||    
T  25230282 tttttggtagcccattcaataagaactccacag 25230250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 187 - 418
Target Start/End: Complemental strand, 25238069 - 25237837
Alignment:
Q  187 aacacccaaggctgacgagggcgagg-agtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccgga 285  Q
    ||||||||  |||||||||||  ||| |||||| ||| ||||| |||| ||||||||||||| ||||||||| ||| || | ||| | ||||||| ||||    
T  25238069 aacacccacagctgacgagggaaagggagtgatagccggtgcacaaggcacgacaatgagcggctcccgacatcttatagaggaaccaaatcacatcgga 25237970  T
Q  286 atgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttc 385  Q
    | || |||||||| |||| |||| |||||||| | | |||||||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||    
T  25237969 aggagagggatcctgaggtcgtgtaggtatgggactacatggttgaaggaaggcttataagaattatttggtactacctatatcaacaagatacatcttc 25237870  T
Q  386 tctttagtagtctatttcataagaactccacag 418  Q
    | ||| |||| | |||  |||||||||||||||    
T  25237869 tttttggtagcccattcaataagaactccacag 25237837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 230 - 418
Target Start/End: Original strand, 32227457 - 32227644
Alignment:
Q  230 aaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggtt 329  Q
    |||| ||||||||||||| |||||||||||||||| | ||| |||||||| ||||||||| |||||||  |||||| || |||||||| | | |||||||    
T  32227457 aaggcacgacaatgagcggctcccgacagcttctagaggaaccgaatcacgccggaatgagagggatct-gaggccttgtaggtatgggactacatggtt 32227555  T
Q  330 gaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    ||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||| ||  ||||   ||||||||||||||||||||    
T  32227556 gaaggaaggcttataagaattgttgggtactacctatattaacaagatgcatcttcttttcggtagctcatttcataagaactccacag 32227644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 184 - 418
Target Start/End: Original strand, 2911005 - 2911239
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    |||||||||||||  |||||||| || |||||| ||||| ||||| |||  |||| ||| ||||  |||  |||||||||| | ||| |||||||||||     
T  2911005 tgtaacacccaagattgacgaggacggggagtggtcgccggtgcacaagacacgataataagcggatcctaacagcttctagacgaaccgaatcacacct 2911104  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| ||||||||||||||||||||||||||| |   |||||||||| ||| | |||||| ||||||||| || |||||||||||||||||||||| |    
T  2911105 gaatgagagggatcccgaggccgtgcaggtatgggaccacatggttgaaagaatggttataaaaattgtttgatattacctatatcaacaagatgcatat 2911204  T
Q  384 tctctttagtagtctatttcataagaactccacag 418  Q
    ||| ||| ||||   ||| ||||||||||||||||    
T  2911205 tctttttggtagctcattccataagaactccacag 2911239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 211 - 417
Target Start/End: Complemental strand, 20885325 - 20885120
Alignment:
Q  211 ggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatgatagggatcccgaggccgtgca 310  Q
    |||||||||||| ||||| |||| ||| ||||||||| ||||||||| |||||| | ||| | ||||||| || ||||| |||||||  |||| |||| |    
T  20885325 ggagtgatcgccggtgcacaaggcacgccaatgagcggctcccgacaacttctagaggaacc-aatcacatcgcaatgagagggatcttgaggtcgtgta 20885227  T
Q  311 ggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaa 410  Q
    ||||||  | | ||||||||||||||  ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||   ||| ||||||||    
T  20885226 ggtatgtgactacatggttgaaggaagacttataagaattgtttgatactacctatatcaacaagatgcatcttctttttagtagcacattccataagaa 20885127  T
Q  411 ctccaca 417  Q
    |||||||    
T  20885126 ctccaca 20885120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 211 - 413
Target Start/End: Complemental strand, 25230914 - 25230712
Alignment:
Q  211 ggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatgatagggatcccgaggccgtgca 310  Q
    ||||||||| || ||||| |||| ||||||||||||  ||||||||||||| || | ||| | |||||||  ||||||| |||||||| |||||| || |    
T  25230914 ggagtgatctccggtgcacaaggcacgacaatgagcagctcccgacagcttatagaggaaccaaatcacattggaatgagagggatcctgaggccatgta 25230815  T
Q  311 ggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaa 410  Q
    ||||||  | | |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| |||| ||| |||| | ||| ||||||||    
T  25230814 ggtatgagactacatggttgaaggaaggtttataagaattgtttggtactacctatatcaacaagatgcattttctttttggtagcccattccataagaa 25230715  T
Q  411 ctc 413  Q
    |||    
T  25230714 ctc 25230712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 211 - 413
Target Start/End: Complemental strand, 25238501 - 25238299
Alignment:
Q  211 ggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatgatagggatcccgaggccgtgca 310  Q
    ||||||||| || ||||| |||| ||||||||||||  ||||||||||||| || | ||| | |||||||  ||||||| |||||||| |||||| || |    
T  25238501 ggagtgatctccggtgcacaaggcacgacaatgagcagctcccgacagcttatagaggaaccaaatcacattggaatgagagggatcctgaggccatgta 25238402  T
Q  311 ggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaa 410  Q
    ||||||  | | |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| |||| ||| |||| | ||| ||||||||    
T  25238401 ggtatgagactacatggttgaaggaaggtttataagaattgtttggtactacctatatcaacaagatgcattttctttttggtagcccattccataagaa 25238302  T
Q  411 ctc 413  Q
    |||    
T  25238301 ctc 25238299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 273 - 418
Target Start/End: Complemental strand, 31284423 - 31284278
Alignment:
Q  273 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 372  Q
    |||||||| |||||||| |||||||  |||| ||||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  31284423 gaatcacatcggaatgagagggatcttgaggtcgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaac 31284324  T
Q  373 aagatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    |||||||||||||| ||  ||||   ||| ||||||||||||||||    
T  31284323 aagatgcatcttcttttcggtagctcattccataagaactccacag 31284278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 237 - 418
Target Start/End: Original strand, 39640900 - 39641081
Alignment:
Q  237 gacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaa 336  Q
    |||||||| || ||||||||||||| || | ||||||||||||| | |||||| || ||||| ||||||||| |||||||  | | ||||||||||||||    
T  39640900 gacaatgaacggctcccgacagcttttagaagaatcgaatcacatcagaatgagagagatcctgaggccgtgtaggtatgagactacatggttgaaggaa 39640999  T
Q  337 agcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
      ||||||||| ||||||||||||||||||||||| |||||||||||||| ||| ||||   ||| ||||||||||||||||    
T  39641000 gacttataagagttgtttggtactacctatatcaataagatgcatcttctttttggtagctcattccataagaactccacag 39641081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 273 - 416
Target Start/End: Original strand, 25248110 - 25248253
Alignment:
Q  273 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 372  Q
    |||||||| |||||||| |||||| |  ||||||||||||||||| | ||||||||| |||||| | |||||||||||||||||||||||||||||||||    
T  25248110 gaatcacatcggaatgagagggattctaaggccgtgcaggtatgggactgcatggttaaaggaatgtttataagaattgtttggtactacctatatcaac 25248209  T
Q  373 aagatgcatcttctctttagtagtctatttcataagaactccac 416  Q
    |||||||||||||| ||| |||| | ||| ||||| ||||||||    
T  25248210 aagatgcatcttctttttggtagcccattccataataactccac 25248253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 273 - 384
Target Start/End: Original strand, 8067279 - 8067390
Alignment:
Q  273 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 372  Q
    |||||||| |||||||| ||||| || |||||||||||||||||| ||||||||||||||||   ||||||||||||||||| |||||||||||||||||    
T  8067279 gaatcacatcggaatgagagggaccctgaggccgtgcaggtatgggattgcatggttgaaggccggcttataagaattgtttagtactacctatatcaac 8067378  T
Q  373 aagatgcatctt 384  Q
    ||||||||||||    
T  8067379 aagatgcatctt 8067390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 273 - 416
Target Start/End: Original strand, 41472300 - 41472442
Alignment:
Q  273 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 372  Q
    |||||||| |||||||| |||||||| |||| ||| ||||||||  | |||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  41472300 gaatcacatcggaatgagagggatcctgaggtcgtacaggtatgagactgcatggttgaaggaa-gcttataagaattgtttggtactacatatatcaac 41472398  T
Q  373 aagatgcatcttctctttagtagtctatttcataagaactccac 416  Q
    |||||||||||||| ||  ||||   ||| ||||||||||||||    
T  41472399 aagatgcatcttcttttcggtagatcattccataagaactccac 41472442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 230 - 384
Target Start/End: Original strand, 14820110 - 14820264
Alignment:
Q  230 aaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggtt 329  Q
    |||| |||| |||||||| |||| ||||||||||| | ||| |||||||||||| ||||| |||| ||| ||| ||||| ||||||||   |||| || |    
T  14820110 aaggcacgataatgagcggctcctgacagcttctagaggaaccgaatcacaccgcaatgagagggttcctgagcccgtgtaggtatggggctgcacggct 14820209  T
Q  330 gaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatctt 384  Q
     |||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  14820210 aaaggaaggcttataagaattgtttggtactacttatatcaacaagatgcatctt 14820264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 184 - 414
Target Start/End: Complemental strand, 25803240 - 25803010
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    ||||||||||||||||||| ||| || |||||| ||||  ||||| |||| |  |||||||||| || || |||||||||| ||||| ||||||| | ||    
T  25803240 tgtaacacccaaggctgactaggacggggagtggtcgctggtgcacaaggcataacaatgagcggcttccaacagcttctagatgaaccgaatcatatcg 25803141  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||| | |||| |||  | | |||| |||||||| | ||||||||||||| ||  ||| |||||||||||||||||||||||||  ||||||||| ||||    
T  25803140 gaataagagggttcctaatgtcgtgtaggtatgggactgcatggttgaagtaagacttgtaagaattgtttggtactacctataaaaacaagatgtatct 25803041  T
Q  384 tctctttagtagtctatttcataagaactcc 414  Q
    ||| ||  |||  | ||||||||||||||||    
T  25803040 tcttttcggtatcccatttcataagaactcc 25803010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 304 - 418
Target Start/End: Complemental strand, 32386850 - 32386736
Alignment:
Q  304 ccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttc 403  Q
    |||||||||||||| | || ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||   ||| |    
T  32386850 ccgtgcaggtatgggactgtatggttgaaggaaggcttataagaattgtttggtactacctatattaacaagatgcatcttcttttcagtagctaattcc 32386751  T
Q  404 ataagaactccacag 418  Q
    |||||||||||||||    
T  32386750 ataagaactccacag 32386736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 273 - 418
Target Start/End: Complemental strand, 27187477 - 27187332
Alignment:
Q  273 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 372  Q
    ||||||||  ||||||| |||||||| ||||| ||||| |||||| | ||||||||| || ||| |||||||||||||||||||||||||||||||||      
T  27187477 gaatcacattggaatgagagggatcctgaggctgtgcatgtatgggactgcatggttaaatgaaggcttataagaattgtttggtactacctatatcact 27187378  T
Q  373 aagatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    |||||||||||||| ||  ||||   ||||||||||||||||||||    
T  27187377 aagatgcatcttcttttcggtagctcatttcataagaactccacag 27187332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 274 - 386
Target Start/End: Original strand, 7477191 - 7477303
Alignment:
Q  274 aatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaaca 373  Q
    ||||||| |||||||| ||||||||  | | ||||||||||||  | |||||||||||||||| ||||||||||||| ||||||||||| ||||||||||    
T  7477191 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 7477290  T
Q  374 agatgcatcttct 386  Q
    |||| ||||||||    
T  7477291 agatacatcttct 7477303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 274 - 386
Target Start/End: Original strand, 7493881 - 7493993
Alignment:
Q  274 aatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaaca 373  Q
    ||||||| |||||||| || |||||  | | ||||||||||||  | |||||||||||||||| ||||||||||||| ||||||||||| ||||||||||    
T  7493881 aatcacatcggaatgagagagatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 7493980  T
Q  374 agatgcatcttct 386  Q
    |||||||||||||    
T  7493981 agatgcatcttct 7493993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 323 - 418
Target Start/End: Complemental strand, 13150651 - 13150556
Alignment:
Q  323 catggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||  ||||   ||| ||||||||||||||||    
T  13150651 catggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacag 13150556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 323 - 418
Target Start/End: Complemental strand, 25238781 - 25238686
Alignment:
Q  323 catggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    ||||||||||||||  ||||||||||||||||||||||| || ||||||||||||||||||||| ||| |||| | ||| ||||||||||||||||    
T  25238781 catggttgaaggaagacttataagaattgtttggtactatctttatcaacaagatgcatcttctttttggtagcccattccataagaactccacag 25238686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 326 - 418
Target Start/End: Complemental strand, 4067454 - 4067362
Alignment:
Q  326 ggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    |||||||||||  ||||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||   ||| ||||||||||||||||    
T  4067454 ggttgaaggaagacttataaaaattgtttggtactacctatatcaacaagatgcatcttctttttggtagctcattacataagaactccacag 4067362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 321 - 386
Target Start/End: Original strand, 29224371 - 29224436
Alignment:
Q  321 tgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttct 386  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||  |||||||||||||||||    
T  29224371 tgcatggttgaaggaagacttataagaattgtttggtactacctatactaacaagatgcatcttct 29224436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 184 - 281
Target Start/End: Original strand, 39653530 - 39653627
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacac 281  Q
    |||||||||||||||||||||||| | |||||| ||||| ||||| |||| ||||||||||||| |||| ||||||||||| | |||  |||||||||    
T  39653530 tgtaacacccaaggctgacgagggtggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaactgaatcacac 39653627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 309 - 381
Target Start/End: Complemental strand, 47518430 - 47518358
Alignment:
Q  309 caggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcat 381  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||  |||| || || |||||||||||||    
T  47518430 caggtatggaattgcatggttgaaggaaaacttataagaattgtttgaaactatctctaccaacaagatgcat 47518358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 283 - 386
Target Start/End: Complemental strand, 25802685 - 25802582
Alignment:
Q  283 ggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatc 382  Q
    ||||||| |||||||  | |||| || |||||||  | ||||||||| | |||| ||| |||||||| ||||||||||||||||||||||||||||||||    
T  25802685 ggaatgagagggatcatgtggccatgtaggtatgagactgcatggttaacggaaggctgataagaatggtttggtactacctatatcaacaagatgcatc 25802586  T
Q  383 ttct 386  Q
    ||||    
T  25802585 ttct 25802582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 183 - 317
Target Start/End: Complemental strand, 13155438 - 13155307
Alignment:
Q  183 ttgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacacc 282  Q
    ||||||||||||| ||||||||||||| |||||| ||||| ||||| |||| |||||||||||||  || |||||||||||| | ||| |||||||| ||    
T  13155438 ttgtaacacccaatgctgacgagggcggggagtg-tcgccggtgcacaaggcacgacaatgagcg-gtctcgacagcttctagaggaaccgaatcacgcc 13155341  T
Q  283 ggaatgatagggatcccgaggccgtgcaggtatgg 317  Q
    | ||||| | |||||| |||||| || ||||||||    
T  13155340 gaaatgaga-ggatcctgaggccttgtaggtatgg 13155307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 183 - 264
Target Start/End: Original strand, 970875 - 970956
Alignment:
Q  183 ttgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttcta 264  Q
    |||||||||||||||| | |||||||| |||||| | ||||| ||| |||||||||||||||||| |||| |||| ||||||    
T  970875 ttgtaacacccaaggccggcgagggcggggagtggttgccagggcacaaggtacgacaatgagcggctcctgacaacttcta 970956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 273 - 377
Target Start/End: Original strand, 41473996 - 41474100
Alignment:
Q  273 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 372  Q
    |||||||| || ||||| |||||||  |||| ||| ||||||||  | || |||||| ||||||  ||||||||||||||||| |||| |||||||||||    
T  41473996 gaatcacatcgaaatgagagggatcttgaggtcgttcaggtatgtgactggatggttaaaggaagacttataagaattgtttgatacttcctatatcaac 41474095  T
Q  373 aagat 377  Q
    |||||    
T  41474096 aagat 41474100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 309 - 395
Target Start/End: Complemental strand, 31104071 - 31103985
Alignment:
Q  309 caggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtag 395  Q
    ||||||||  ||||||||||| ||||||  ||||||||||||||||| ||||| ||||| |||| |||||||| |||| ||| ||||    
T  31104071 caggtatgagattgcatggttcaaggaagacttataagaattgtttgatactatctataccaactagatgcattttctttttggtag 31103985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 384
Target Start/End: Original strand, 3890046 - 3890088
Alignment:
Q  342 ataagaattgtttggtactacctatatcaacaagatgcatctt 384  Q
    |||||||||||||| |||||| |||||||||||||||||||||    
T  3890046 ataagaattgtttgctactacatatatcaacaagatgcatctt 3890088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 384
Target Start/End: Original strand, 3899868 - 3899910
Alignment:
Q  342 ataagaattgtttggtactacctatatcaacaagatgcatctt 384  Q
    ||||||||||||||||||||| |||| ||||||||||||||||    
T  3899868 ataagaattgtttggtactacatataccaacaagatgcatctt 3899910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 25238907 - 25238863
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgca 228  Q
    |||||||||||||||||||||||||| |||||| ||||| |||||    
T  25238907 tgtaacacccaaggctgacgagggcggggagtggtcgccggtgca 25238863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 386
Target Start/End: Complemental strand, 26310090 - 26310023
Alignment:
Q  319 attgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttct 386  Q
    |||||||||||||||||    ||||||||||| |||| |||||| |||| ||| ||||||||||||||    
T  26310090 attgcatggttgaaggacgatttataagaattttttgttactacatataccaaaaagatgcatcttct 26310023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 273 - 333
Target Start/End: Original strand, 12820643 - 12820703
Alignment:
Q  273 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaag 333  Q
    |||||||| |||||||| |||||| |  ||||||| ||||||||| | |||||||||||||    
T  12820643 gaatcacatcggaatgagagggattctaaggccgtacaggtatgggactgcatggttgaag 12820703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 127; Significance: 2e-65; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 184 - 418
Target Start/End: Original strand, 1130 - 1364
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    |||||||||||||||||||||||||| |||||| ||||| ||||| |||| ||||||||||||| |||| |||| |||||| | ||| ||||||||||||    
T  1130 tgtaacacccaaggctgacgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacaacttctagaggaaccgaatcacaccg 1229  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| | || ||| |||||| ||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  1230 gaatgagacggttcctgaggccatgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatataaacaagatgcatct 1329  T
Q  384 tctctttagtagtctatttcataagaactccacag 418  Q
    ||| ||  ||||   ||| ||||||||||||||||    
T  1330 tcttttcggtagctcattccataagaactccacag 1364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 127; Significance: 2e-65; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 184 - 418
Target Start/End: Complemental strand, 34405827 - 34405593
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    |||||||||||||||||||||||||| |||||| ||||| ||||| |||| ||||||||||||| |||||||||||||||| | ||| ||||||||||||    
T  34405827 tgtaacacccaaggctgacgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcccgacagcttctagaggaaccgaatcacaccg 34405728  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| ||||||||  ||||| || |||||||| | | |||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||||||    
T  34405727 gaatgagagggatcctaaggccttgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaggatgcatct 34405628  T
Q  384 tctctttagtagtctatttcataagaactccacag 418  Q
    ||| ||  ||||   ||| ||||||||||||||||    
T  34405627 tcttttcggtagctcattccataagaactccacag 34405593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 184 - 418
Target Start/End: Original strand, 2189054 - 2189288
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    |||||||| ||||| ||||||||||| |||||| ||||| ||||| |||| ||||||||||||| |||| ||||||||||| | ||| ||||||||||||    
T  2189054 tgtaacactcaaggatgacgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacaccg 2189153  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| |||| ||| ||||| |||||||| ||| | |||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  2189154 gaatgagagggttcctgaggctgtgcaggtgtgggactgcatggttgaaagaaggcttataagaattgtttggcactacctatatcaacaagatgcatct 2189253  T
Q  384 tctctttagtagtctatttcataagaactccacag 418  Q
    ||| ||   |||   ||||||||||||||||||||    
T  2189254 tcttttcgatagctcatttcataagaactccacag 2189288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 185 - 418
Target Start/End: Original strand, 36422163 - 36422396
Alignment:
Q  185 gtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccgg 284  Q
    |||||||||||| | |||||||  | |||||| ||||| ||||| |||| ||||||||||||| |||||||||||||||| | |||||||||||| ||||    
T  36422163 gtaacacccaagaccgacgaggatggggagtggtcgccggtgcacaaggcacgacaatgagcggctcccgacagcttctagaggaatcgaatcacgccgg 36422262  T
Q  285 aatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatctt 384  Q
    ||||| ||||||||  ||||| || |||||||| | | |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  36422263 aatgagagggatcctaaggccttgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatctt 36422362  T
Q  385 ctctttagtagtctatttcataagaactccacag 418  Q
    || ||  ||||   ||||||||||||||||||||    
T  36422363 cttttcggtagctcatttcataagaactccacag 36422396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 182 - 386
Target Start/End: Complemental strand, 29357693 - 29357490
Alignment:
Q  182 attgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacac 281  Q
    ||||||||||||||||||||||||||||   | || |||||  ||||||||| ||||||||||||| ||||||||| |||||| |||||  |||||||||    
T  29357693 attgtaacacccaaggctgacgagggcgtaaaatggtcgccgatgcataaggcacgacaatgagcggctcccgacaacttctagatgaactgaatcacac 29357594  T
Q  282 cggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcat 381  Q
    || ||||| ||| ||||||||| ||||||||||||| | |||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||    
T  29357593 cg-aatgagaggtatcccgaggtcgtgcaggtatgggactgcatggttgaaggaatgtttataagaattgtttggtactaactatatcaacaagatgcat 29357495  T
Q  382 cttct 386  Q
    |||||    
T  29357494 cttct 29357490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 184 - 418
Target Start/End: Complemental strand, 6747834 - 6747600
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    |||||||||||||||||||||||||  |||||| ||||| ||||| |||| | ||||||||||| ||||||||| |||||| |  |   ||||||||  |    
T  6747834 tgtaacacccaaggctgacgagggcagggagtggtcgccggtgcacaaggcatgacaatgagcggctcccgacaacttctagacaagctgaatcacattg 6747735  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| |||||||| ||||||||| |||||||  | | |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  6747734 gaatgagagggatcctgaggccgtgtaggtatgatactacatggttgaaggaaggattataagaattgtttggtactacctatatcaacaagatgcatct 6747635  T
Q  384 tctctttagtagtctatttcataagaactccacag 418  Q
    ||| ||| |||| ||||| ||||| ||||||||||    
T  6747634 tctttttggtagcctattccataaaaactccacag 6747600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 184 - 384
Target Start/End: Original strand, 43233323 - 43233523
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    |||||||||||||||||||||| |||||||||| ||||| |||||||||| ||||||||||||| ||||  |||||||||| | ||| ||||||||||||    
T  43233323 tgtaacacccaaggctgacgagtgcgaggagtggtcgccggtgcataaggcacgacaatgagcggctcctaacagcttctagaggaaccgaatcacaccg 43233422  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
     ||||| |||||||  ||||||||| |||||||  | || |||||| ||||||  ||||||||||||||||||||||| |||||||||||||||||||||    
T  43233423 aaatgagagggatcatgaggccgtgtaggtatgtgactgtatggttaaaggaagacttataagaattgtttggtactatctatatcaacaagatgcatct 43233522  T
Q  384 t 384  Q
    |    
T  43233523 t 43233523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 230 - 418
Target Start/End: Original strand, 2193212 - 2193400
Alignment:
Q  230 aaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggtt 329  Q
    |||| |||||||||| || |||| ||||||||||| | ||| |||||||||||||||||| |||| ||| ||| |||||||||||||| | |||||||||    
T  2193212 aaggcacgacaatgaacggctcctgacagcttctagaggaaccgaatcacaccggaatgagagggttcctgagaccgtgcaggtatgggactgcatggtt 2193311  T
Q  330 gaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||   |||||||| |||||||||||    
T  2193312 gaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctattcggtagctcatttcataggaactccacag 2193400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 184 - 418
Target Start/End: Original strand, 679727 - 679960
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    ||||||||| ||||||||||||| || |||||| |||||  |||| || | ||||||||||||  |||||||||||||||| | |||  |||||||| |     
T  679727 tgtaacacctaaggctgacgaggacggggagtggtcgccgatgcacaaagcacgacaatgagctgctcccgacagcttctagaggaactgaatcacatca 679826  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| |||||||| |||| |||| |||||||| | | ||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||| |    
T  679827 gaatgagagggatcctgaggtcgtgtaggtatgggagtacatggctgaaggaaggcttataagaattg-ttggtactacctatatcaacaagatgcatat 679925  T
Q  384 tctctttagtagtctatttcataagaactccacag 418  Q
    ||| ||| |||| | ||| ||||||||||||||||    
T  679926 tctttttggtagcccattccataagaactccacag 679960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 181 - 374
Target Start/End: Complemental strand, 26957796 - 26957603
Alignment:
Q  181 cattgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcaca 280  Q
    |||||||||||| ||||| |||||||||| | |||| ||| | ||||| |||| ||||||||||||| ||||||||| |||||| | ||| |||||||||    
T  26957796 cattgtaacaccaaaggccgacgagggcgggaagtggtcgtcggtgcacaaggcacgacaatgagcggctcccgacaacttctagaggaaccgaatcaca 26957697  T
Q  281 ccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaa 374  Q
     |||||||| |||||||  ||||| ||| |||||||||| | |||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  26957696 tcggaatgagagggatcttgaggctgtgtaggtatggaactacatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaa 26957603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 184 - 415
Target Start/End: Complemental strand, 2611888 - 2611657
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    ||||||||| |||||||||||||| | |||||| ||||| ||||| |||| ||||||||||||| |||||||||||||||| | |||  |||||||| ||    
T  2611888 tgtaacaccaaaggctgacgagggtggggagtggtcgccggtgcacaaggcacgacaatgagcggctcccgacagcttctagaggaactgaatcacatcg 2611789  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| |||| ||| |||| | || |||||||  | |  ||||| ||||||| |||||||||||||||||||||||| ||||| |||||||||||||||    
T  2611788 gaatgagaggggtcctgaggtcatgtaggtatgagactatatggtggaaggaaggcttataagaattgtttggtactatctataacaacaagatgcatct 2611689  T
Q  384 tctctttagtagtctatttcataagaactcca 415  Q
    ||| ||| |||| | |||  ||||||||||||    
T  2611688 tctttttggtagcccattctataagaactcca 2611657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 192 - 418
Target Start/End: Complemental strand, 35527348 - 35527123
Alignment:
Q  192 ccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatgata 291  Q
    ||||||||||||||| || |||||| ||| | ||||| |||  ||| ||||||||| ||||| |||||||||| | ||| |||||||||||| ||||| |    
T  35527348 ccaaggctgacgaggacggggagtggtcgtcggtgcacaagacacg-caatgagcggctcccaacagcttctagacgaaccgaatcacaccgaaatgaga 35527250  T
Q  292 gggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctcttta 391  Q
    |||||||||||| ||||||  ||||| | ||  |||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| |||| || |    
T  35527249 gggatcccgaggtcgtgcaaatatgggactggttggttgaaagaaggcttataagaattgtttggtgctacctatatcaacaagatgcatattcttttca 35527150  T
Q  392 gtagtctatttcataagaactccacag 418  Q
    |||||| ||| |||| |||||||||||    
T  35527149 gtagtccattccataggaactccacag 35527123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 184 - 418
Target Start/End: Original strand, 42515455 - 42515688
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    ||||| |||||||||||||||||||  |||||| ||||| |||||   ||   ||||||||||  |||||||||||||||| | ||| ||||||||| |     
T  42515455 tgtaatacccaaggctgacgagggcagggagtg-tcgccggtgcaaggggcgtgacaatgagcagctcccgacagcttctagacgaaccgaatcacatca 42515553  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| |||||||| ||||||||| |||||||  | | |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  42515554 gaatgagagggatcctgaggccgtgtaggtatgagactacatggttgaaggaaggcttataagaagtgtttggtactacctatatcaacaagatgcatct 42515653  T
Q  384 tctctttagtagtctatttcataagaactccacag 418  Q
    ||| ||  ||||   ||| ||||||||||||||||    
T  42515654 tcttttcggtagctcattccataagaactccacag 42515688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 211 - 418
Target Start/End: Original strand, 28495791 - 28495998
Alignment:
Q  211 ggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatgatagggatcccgaggccgtgca 310  Q
    |||||| ||||| ||||| |||| || ||||| |||| ||||| ||| |||||| | ||||||||||||| |||||||| |||||||  ||||||||| |    
T  28495791 ggagtggtcgccggtgcacaaggcacaacaattagcggctcccaacaacttctagaggaatcgaatcacatcggaatgagagggatcttgaggccgtgta 28495890  T
Q  311 ggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaa 410  Q
    ||||||| | | |||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||| ||  ||||   ||| ||||||||    
T  28495891 ggtatgggactacatggttgaaggaaggcttataagaactgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaa 28495990  T
Q  411 ctccacag 418  Q
    ||||||||    
T  28495991 ctccacag 28495998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 184 - 418
Target Start/End: Complemental strand, 35474357 - 35474123
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    ||||||||| |||||||| ||| ||| |||||| ||| | ||||| |||| |||||||||||||  |||||||| |||||| |  | |||||||||||||    
T  35474357 tgtaacacctaaggctgatgagtgcggggagtggtcgtcggtgcacaaggcacgacaatgagcggttcccgacaacttctagaacagtcgaatcacaccg 35474258  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| ||||||||  ||| |||| |||||||  | | ||||||||||| ||  |||||||||||||||| ||||||| ||||||||||||||||||||    
T  35474257 gaatgagagggatccttaggtcgtgtaggtatgagactacatggttgaagaaagacttataagaattgtttagtactacttatatcaacaagatgcatct 35474158  T
Q  384 tctctttagtagtctatttcataagaactccacag 418  Q
    ||| ||| ||||   ||| ||||||||||||||||    
T  35474157 tctttttggtagctcattccataagaactccacag 35474123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 273 - 418
Target Start/End: Complemental strand, 2941904 - 2941759
Alignment:
Q  273 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 372  Q
    |||||||| | |||||| |||||||| |||||||| ||||||||| | |||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  2941904 gaatcacatcagaatgagagggatcctgaggccgtacaggtatgggactgcatggttgaaggaaggctgataagaattgtttggtactacctatatcaac 2941805  T
Q  373 aagatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    |||||||||||||| ||  ||||   ||| ||||||||||||||||    
T  2941804 aagatgcatcttcttttcggtagctcattccataagaactccacag 2941759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 273 - 418
Target Start/End: Original strand, 18833285 - 18833430
Alignment:
Q  273 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 372  Q
    |||||||| |||||||| |||| ||| |||||||| ||||||||||| ||||||||||| |||||||||||| ||||||||| |||||||||||||||||    
T  18833285 gaatcacatcggaatgagagggttcctgaggccgtacaggtatggaactgcatggttgagggaaagcttatatgaattgtttagtactacctatatcaac 18833384  T
Q  373 aagatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    |||||||||||||| ||  ||||   ||| ||||||||||||||||    
T  18833385 aagatgcatcttcttttcggtagctaattacataagaactccacag 18833430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 273 - 418
Target Start/End: Original strand, 42515091 - 42515236
Alignment:
Q  273 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 372  Q
    |||||||| |||||||| |||||||| |||||||||||||||||  | |||||| |||||||||  ||||||||||||||||||||||||||||||||||    
T  42515091 gaatcacatcggaatgagagggatcctgaggccgtgcaggtatgagactgcatgattgaaggaagacttataagaattgtttggtactacctatatcaac 42515190  T
Q  373 aagatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    ||||||||| |||| ||| ||||   ||| ||||||||||||||||    
T  42515191 aagatgcattttctttttggtagctcattccataagaactccacag 42515236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 273 - 418
Target Start/End: Original strand, 9124958 - 9125103
Alignment:
Q  273 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 372  Q
    |||||||| |||||||| || ||||  |||||||||||||||||  | || |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  9124958 gaatcacatcggaatgagagagatcttgaggccgtgcaggtatgagactgtatggttaaaggaaagcttataagaattgtttggtactacctatatcaac 9125057  T
Q  373 aagatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    |||||||||||||| ||  ||||   ||| ||||||||||||||||    
T  9125058 aagatgcatcttcttttcggtagctcattccataagaactccacag 9125103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 273 - 418
Target Start/End: Complemental strand, 13125283 - 13125138
Alignment:
Q  273 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 372  Q
    |||||| | |||||||| |||||||  |||||| ||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| |||    
T  13125283 gaatcatatcggaatgagagggatcttgaggccctgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatattaac 13125184  T
Q  373 aagatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    |||||||||||||| ||  ||||   ||| ||||||||||||||||    
T  13125183 aagatgcatcttcttttcggtagctcattccataagaactccacag 13125138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 272 - 415
Target Start/End: Complemental strand, 6719222 - 6719079
Alignment:
Q  272 cgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaa 371  Q
    |||||||||  ||||||| |||||||| ||||| ||| |||||||| | | |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  6719222 cgaatcacattggaatgagagggatcctgaggctgtgtaggtatgggactacatggttgaaggaatgcttataagaattgtttggtactacctatatcaa 6719123  T
Q  372 caagatgcatcttctctttagtagtctatttcataagaactcca 415  Q
    ||||||||||||||| ||  ||||   ||| |||||||||||||    
T  6719122 caagatgcatcttcttttcggtagctcattccataagaactcca 6719079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 273 - 383
Target Start/End: Complemental strand, 11517535 - 11517426
Alignment:
Q  273 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 372  Q
    |||||||| |||||||| |||||||| |||||||| ||||||||| | |||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  11517535 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggactgcatggt-gaaggaaggcttataagaattgtttggtactacctatatcaac 11517437  T
Q  373 aagatgcatct 383  Q
    |||||||||||    
T  11517436 aagatgcatct 11517426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 240 - 418
Target Start/End: Complemental strand, 28495788 - 28495610
Alignment:
Q  240 aatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagc 339  Q
    |||||||| ||||| |||||||||| | |||||||||| || |||||||| |||||||| |||| |||| |||||||| | | ||||||||||||||  |    
T  28495788 aatgagcggctcccaacagcttctagaggaatcgaatcccatcggaatgagagggatcctgaggtcgtgtaggtatgggactacatggttgaaggaagac 28495689  T
Q  340 ttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    ||||||||||||||  ||  ||||||||||||||||||||||||||| ||  ||||   ||| ||||||||||||||||    
T  28495688 ttataagaattgttgagttttacctatatcaacaagatgcatcttcttttaggtagctcattccataagaactccacag 28495610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 182 - 358
Target Start/End: Complemental strand, 3305550 - 3305374
Alignment:
Q  182 attgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacac 281  Q
    ||||||||||  ||||||||||||||||  ||||| ||||| ||| |||||| ||||||||||||  |||||||||||||||| | ||| |||||||||     
T  3305550 attgtaacacataaggctgacgagggcggagagtggtcgccggtggataaggcacgacaatgagcagctcccgacagcttctagaggaaccgaatcacat 3305451  T
Q  282 cggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggta 358  Q
    || |||||  ||||||| ||||||||| | |||||| | | |||||||||| ||| |||||| ||||||||||||||    
T  3305450 cgaaatgagggggatcctgaggccgtgtaagtatgggactacatggttgaatgaaggcttatgagaattgtttggta 3305374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 184 - 316
Target Start/End: Original strand, 10430673 - 10430805
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    |||||||||||||||||| ||||||| |||||| ||||| ||||| |||| ||||||||||||| |||| ||||||||||| | ||| || |||||||||    
T  10430673 tgtaacacccaaggctgatgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgtatcacaccg 10430772  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatg 316  Q
    |||||| |||| ||| |||||||||||||||||    
T  10430773 gaatgagagggttcctgaggccgtgcaggtatg 10430805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 274 - 418
Target Start/End: Complemental strand, 36015557 - 36015413
Alignment:
Q  274 aatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaaca 373  Q
    |||||||||||||||| ||||||||| |||| ||||| |||||  | | |||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  36015557 aatcacaccggaatgagagggatcccaaggcagtgcaagtatgagactccatggttgaaggaaagcttaaaagaattgtttggtactacatatatcaaca 36015458  T
Q  374 agatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    |||||| |||||| || | ||| | ||| |||||||||| |||||    
T  36015457 agatgcctcttcttttaaatagcccattccataagaacttcacag 36015413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 238 - 418
Target Start/End: Original strand, 46425705 - 46425885
Alignment:
Q  238 acaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaa 337  Q
    |||| ||||| |||||||||||||||| |  |  ||||||||| |||||||| |||||||| ||| || || |||||||| | | ||||||||||  ||     
T  46425705 acaaagagcggctcccgacagcttctagacaagccgaatcacatcggaatgagagggatcctgagaccatgtaggtatgggactacatggttgaaataag 46425804  T
Q  338 gcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| ||  |||   |||| ||||||||||||||||    
T  46425805 gcttataagaattgtttggtattacctatatcaacaagatgcatcttcttttcggtatcttattccataagaactccacag 46425885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 184 - 413
Target Start/End: Complemental strand, 29039248 - 29039027
Alignment:
Q  184 tgtaacacccaaggctgacgagggc-gaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacacc 282  Q
    ||||||||||| |||||| | |||| | |||||||||||| ||||| |||| ||||||||||||| ||||||||||          || ||||||||| |    
T  29039248 tgtaacacccacggctgatgggggcaggggagtgatcgccggtgcacaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacatc 29039158  T
Q  283 ggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatc 382  Q
    ||||||| ||| |||| ||||||||| || ||||  | | |||||||||| | | ||||| ||||||||||||||||||||||||||||||| |||||||    
T  29039157 ggaatgagaggcatcctgaggccgtgtagatatgtgactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatc 29039058  T
Q  383 ttctctttagtagtctatttcataagaactc 413  Q
    |||| |||  || || ||| |||||||||||    
T  29039057 ttctttttgataatccattccataagaactc 29039027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 273 - 384
Target Start/End: Complemental strand, 5406735 - 5406624
Alignment:
Q  273 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 372  Q
    |||||||| |||||||||||||||||  | | ||||| ||||||| | ||||||||||||||||   ||||||||||||||||||| |||||||||||||    
T  5406735 gaatcacatcggaatgatagggatcctaaagtcgtgccggtatgggactgcatggttgaaggaagatttataagaattgtttggtattacctatatcaac 5406636  T
Q  373 aagatgcatctt 384  Q
    ||||||||||||    
T  5406635 aagatgcatctt 5406624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 183 - 317
Target Start/End: Original strand, 2463551 - 2463685
Alignment:
Q  183 ttgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacacc 282  Q
    ||||||||||||||||||||||||||| |||||| ||||| ||||| |||| |||||||||| || ||||  |||||||||| | ||| |||| ||||||    
T  2463551 ttgtaacacccaaggctgacgagggcggggagtggtcgccggtgcacaaggcacgacaatgaacggctcctaacagcttctagaggaaccgaaacacacc 2463650  T
Q  283 ggaatgatagggatcccgaggccgtgcaggtatgg 317  Q
    ||||||| |||| ||| |||||| || ||||||||    
T  2463651 ggaatgagagggttcctgaggccatgtaggtatgg 2463685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 323 - 418
Target Start/End: Original strand, 2465782 - 2465877
Alignment:
Q  323 catggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||  ||||   ||| ||||||||||||||||    
T  2465782 catggttgaaggaaggcttataagagttgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacag 2465877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 300 - 418
Target Start/End: Original strand, 2465950 - 2466068
Alignment:
Q  300 gaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtcta 399  Q
    |||||| || |||||||| | | |||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||| ||  ||||   |    
T  2465950 gaggccatgtaggtatgggactacatggttgaaggaaggcttataagagttgtttggtactacctatatcaacaagttgcatcttcttttcggtagctca 2466049  T
Q  400 tttcataagaactccacag 418  Q
    || ||||||||||||||||    
T  2466050 ttccataagaactccacag 2466068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 237 - 386
Target Start/End: Complemental strand, 22529418 - 22529269
Alignment:
Q  237 gacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaa 336  Q
    ||||||||||| |||||| | ||||||| | ||| ||||||| | | |||||| |||||||| |||| | || | ||||||   | ||||||||||||||    
T  22529418 gacaatgagcggctcccgcctgcttctagacgaaccgaatcatatccgaatgagagggatcctgaggtcatgtaagtatgggcctacatggttgaaggaa 22529319  T
Q  337 agcttataagaattgtttggtactacctatatcaacaagatgcatcttct 386  Q
     ||||||||||| |||||||||||| |||||| |||||||||||||||||    
T  22529318 ggcttataagaaatgtttggtactatctatataaacaagatgcatcttct 22529269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 276 - 384
Target Start/End: Original strand, 25182363 - 25182471
Alignment:
Q  276 tcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaag 375  Q
    ||||| |||||||| || ||||| ||| | ||||| |||||  | ||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  25182363 tcacatcggaatgagagagatcctgagactgtgcaagtatgagactgcatggttgaaggaagacttataagaattgtttggtactacctatatcaacaag 25182462  T
Q  376 atgcatctt 384  Q
    || ||||||    
T  25182463 atacatctt 25182471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 283 - 364
Target Start/End: Complemental strand, 13124838 - 13124757
Alignment:
Q  283 ggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacct 364  Q
    ||||||| |||||||  |||||||||||||||||| | |||||||||||||||| ||||||||||||||| |||||||||||    
T  13124838 ggaatgagagggatcttgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtgtggtactacct 13124757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 269 - 418
Target Start/End: Complemental strand, 31406735 - 31406586
Alignment:
Q  269 aatcgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatat 368  Q
    |||||||||||| |  ||||| |||||||| || ||||||||| | ||| | || ||||||||| ||   ||||| |||||||||||||  |||||||||    
T  31406735 aatcgaatcacatcaaaatgagagggatcctgaagccgtgcagatctgggactgaatggttgaaagatgacttattagaattgtttggtgttacctatat 31406636  T
Q  369 caacaagatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    |||||||||||||||||| ||  |||| |  |||||||||||||||||||    
T  31406635 caacaagatgcatcttcttttcggtagcccgtttcataagaactccacag 31406586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 291 - 381
Target Start/End: Original strand, 11372468 - 11372558
Alignment:
Q  291 agggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcat 381  Q
    |||| |||| ||||| || ||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||| || ||||| |||||||    
T  11372468 agggttcccaaggccatgtaggtatgaaattgtatggttgaaggaaggcttataagaattgtttggtactacctgtaccaacatgatgcat 11372558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 324 - 418
Target Start/End: Complemental strand, 26421401 - 26421307
Alignment:
Q  324 atggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    |||||||||||||  ||||||||||||| ||| ||||||||||||||||||||||||| || | ||  |||||| ||| ||||||||||||||||    
T  26421401 atggttgaaggaagacttataagaattgcttgatactacctatatcaacaagatgcatatttttttcggtagtccattccataagaactccacag 26421307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 321 - 386
Target Start/End: Complemental strand, 31743923 - 31743858
Alignment:
Q  321 tgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttct 386  Q
    |||||||||||||||| |||||||||||| ||||||| ||| ||||||||||||||||||||||||    
T  31743923 tgcatggttgaaggaatgcttataagaatggtttggtgctatctatatcaacaagatgcatcttct 31743858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 303 - 415
Target Start/End: Original strand, 1628745 - 1628854
Alignment:
Q  303 gccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctattt 402  Q
    ||||||||| ||||| ||||||||||||||| || ||||||||   ||||||||||||| | |||||||||||||||||||||| ||| | || | ||      
T  1628745 gccgtgcagatatgggattgcatggttgaagaaaggcttataa---ttgtttggtactatcgatatcaacaagatgcatcttcttttttgaagcccatac 1628841  T
Q  403 cataagaactcca 415  Q
    |||||||||||||    
T  1628842 cataagaactcca 1628854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 300 - 418
Target Start/End: Complemental strand, 26421880 - 26421762
Alignment:
Q  300 gaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtcta 399  Q
    ||||||||||| |||||  | ||||||||||||| || ||| |||||||||||| |||||| |||||| |||||||||| ||||||| ||  |||| | |    
T  26421880 gaggccgtgcatgtatgagactgcatggttgaagtaaggctcataagaattgttaggtactccctataccaacaagatgaatcttcttttcggtagccca 26421781  T
Q  400 tttcataagaactccacag 418  Q
    || |||||||||| |||||    
T  26421780 ttccataagaactacacag 26421762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 184 - 366
Target Start/End: Complemental strand, 16812074 - 16811900
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    ||||||| ||||||||||| |||||| |||||| | ||| ||||| |||  ||| ||||||||| |||||||| |||||||||  || ||||||||| |     
T  16812074 tgtaacatccaaggctgactagggcggggagtggttgccggtgcacaagacacgccaatgagcggctcccgacggcttctaaagaaaccgaatcacatca 16811975  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctat 366  Q
    |||||| |        || |||||| |||||||  | | |||||||||||||| ||||||||||||||||| |||||| ||||    
T  16811974 gaatgaga--------gatgccgtgtaggtatgagactacatggttgaaggaatgcttataagaattgttttgtactatctat 16811900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 272 - 386
Target Start/End: Original strand, 9623206 - 9623320
Alignment:
Q  272 cgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaa 371  Q
    |||||||||  ||||||| |||||||| ||||  ||||| | |||  | | |||||| ||||||   ||||||||||||||||| ||| |||||||||||    
T  9623206 cgaatcacaatggaatgagagggatccagaggttgtgcatgcatgagactccatggtagaaggagtacttataagaattgtttgataccacctatatcaa 9623305  T
Q  372 caagatgcatcttct 386  Q
    |||||||||||||||    
T  9623306 caagatgcatcttct 9623320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 323 - 412
Target Start/End: Original strand, 16192368 - 16192457
Alignment:
Q  323 catggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaact 412  Q
    |||| ||||| ||| | ||||||||||||||||||| |||||| |||||||||||||||||||  ||| |||| | ||| ||||||||||    
T  16192368 catgattgaatgaaggattataagaattgtttggtattacctacatcaacaagatgcatcttcgttttggtagcccattccataagaact 16192457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 305 - 374
Target Start/End: Original strand, 6585639 - 6585708
Alignment:
Q  305 cgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaa 374  Q
    ||||||| ||||  |||||||| ||||| |||  ||||||| ||||||||||||||||||||||||||||    
T  6585639 cgtgcagatatgagattgcatgattgaaagaagacttataaaaattgtttggtactacctatatcaacaa 6585708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 371
Target Start/End: Original strand, 2490086 - 2490136
Alignment:
Q  321 tgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaa 371  Q
    |||||| ||||||||| ||||||||||| |||||| |||||||||||||||    
T  2490086 tgcatgattgaaggaatgcttataagaagtgtttgttactacctatatcaa 2490136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 305 - 378
Target Start/End: Original strand, 33316759 - 33316832
Alignment:
Q  305 cgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatg 378  Q
    ||||||||||||  | | |||||||||||||||  ||||||||||||||||  | ||| |||||||||||||||    
T  33316759 cgtgcaggtatgagactacatggttgaaggaaaaattataagaattgtttgacaatacttatatcaacaagatg 33316832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 184 - 228
Target Start/End: Original strand, 2189510 - 2189554
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgca 228  Q
    |||||||||||||||||||||||||| |||||| ||||| |||||    
T  2189510 tgtaacacccaaggctgacgagggcggggagtggtcgccggtgca 2189554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 184 - 410
Target Start/End: Original strand, 37672064 - 37672296
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttcta-----aatgaatcgaat-c 277  Q
    |||||||||||| | |||||||||||| ||||||| | |||||| ||||| | ||||||||||| |||  |||| ||||||     || ||| ||||| |    
T  37672064 tgtaacacccaatgttgacgagggcgatgagtgattgtcagtgcgtaaggcatgacaatgagcggctcatgacatcttctaggaaaaaagaaacgaattc 37672163  T
Q  278 acaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagat 377  Q
    ||| |  ||||| |||| ||   |  ||||||||||||   | |||||||||| |  || | |||||| |||||||||||||||| | || |||||||||    
T  37672164 acatcataatgagaggggtcatcacaccgtgcaggtataagactgcatggttgcaaaaaggtttataataattgtttggtactacttgtaccaacaagat 37672263  T
Q  378 gcatcttctctttagtagtctatttcataagaa 410  Q
    ||| ||||| |||  ||||  ||||||||||||    
T  37672264 gcaacttctttttgttagttgatttcataagaa 37672296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 301 - 417
Target Start/End: Original strand, 11372926 - 11373042
Alignment:
Q  301 aggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctat 400  Q
    ||||| || |||||||  |||||||||||||| |||  ||| ||||||||||||  || || ||||| ||||||||||  |||||| ||| |||| |||     
T  11372926 aggccatgtaggtatgagattgcatggttgaatgaagacttgtaagaattgtttcatagtatctataccaacaagatgagtcttctttttcgtagcctaa 11373025  T
Q  401 ttcataagaactccaca 417  Q
      |||||||||| ||||    
T  11373026 accataagaactacaca 11373042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 125; Significance: 4e-64; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 182 - 418
Target Start/End: Original strand, 4469 - 4705
Alignment:
Q  182 attgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacac 281  Q
    |||||||||||||||||||||||||||||||||||  |||| ||||| |||| ||||||||||||| |||| ||||||||||| | ||| |||||||||     
T  4469 attgtaacacccaaggctgacgagggcgaggagtggccgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacat 4568  T
Q  282 cggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcat 381  Q
    ||||| || |||| ||| |||||| ||||||||||| | |||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||    
T  4569 cggaaggagagggttcctgaggccatgcaggtatgggactgcatggttgaaggaaggtttagaagaattgtttggtactacctatatcaacaagatgcat 4668  T
Q  382 cttctctttagtagtctatttcataagaactccacag 418  Q
    ||||| ||  ||||   |||| |||||||||||||||    
T  4669 cttcttttcggtagctcattttataagaactccacag 4705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 184 - 418
Target Start/End: Original strand, 4926 - 5165
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    ||||||||| ||||||||||||||||||||||| ||||| ||||| |||| |||||||| |||| |||| |||| |||||| | ||| ||||||||||||    
T  4926 tgtaacacctaaggctgacgagggcgaggagtggtcgccggtgcacaaggcacgacaattagcggctcctgacaacttctagaggaaccgaatcacaccg 5025  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagctt-----ataagaattgtttggtactacctatatcaacaagatg 378  Q
    |||||| |||| ||| |||||| ||||||||||| | |||||||||||||||| | ||     | ||||||||||||||||||||||||| |||||||||    
T  5026 gaatgagagggttcctgaggccatgcaggtatgggactgcatggttgaaggaaggtttaaaagagaagaattgtttggtactacctatattaacaagatg 5125  T
Q  379 catcttctctttagtagtctatttcataagaactccacag 418  Q
    |||||||| ||  ||||   ||||||||||||||||||||    
T  5126 catcttcttttcggtagctcatttcataagaactccacag 5165  T

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Target: scaffold0168 (Bit Score: 120; Significance: 4e-61; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 183 - 418
Target Start/End: Original strand, 2651 - 2886
Alignment:
Q  183 ttgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacacc 282  Q
    ||||||||||||||||||||||||||| |||||| ||||| | ||| |||| ||||||||||| | ||||||||| |||||| | ||||||||||||| |    
T  2651 ttgtaacacccaaggctgacgagggcggggagtggtcgccggagcacaaggcacgacaatgagtggctcccgacaacttctagaggaatcgaatcacatc 2750  T
Q  283 ggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatc 382  Q
    | ||||| |||||||| ||||||||| |||||||| | | |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||     
T  2751 gaaatgagagggatcctgaggccgtgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcata 2850  T
Q  383 ttctctttagtagtctatttcataagaactccacag 418  Q
    |||| ||  ||||   ||| ||||||||||||||||    
T  2851 ttcttttcggtagctcattccataagaactccacag 2886  T

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Target: scaffold0088 (Bit Score: 116; Significance: 9e-59; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 184 - 387
Target Start/End: Original strand, 23583 - 23786
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    |||||||||||||||||||||||||| ||| || ||||| ||||| |||| ||||||||||||| |||| ||  || |||| | ||| ||||||||||||    
T  23583 tgtaacacccaaggctgacgagggcggggaatggtcgccggtgcacaaggcacgacaatgagcggctcctgatggcatctagaggaaccgaatcacaccg 23682  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
     ||||| |||| ||  |||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  23683 aaatgagagggttcttgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatct 23782  T
Q  384 tctc 387  Q
    ||||    
T  23783 tctc 23786  T

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Target: scaffold0002 (Bit Score: 115; Significance: 4e-58; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 184 - 418
Target Start/End: Original strand, 154668 - 154901
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    |||||||||||||||||| ||||||| |||||| ||||| ||||| |||| ||||||||||||| ||| |||||||||||| | ||| |||||||| |||    
T  154668 tgtaacacccaaggctgatgagggcggggagtg-tcgccggtgcacaaggcacgacaatgagcggctctcgacagcttctagaggaaccgaatcacgccg 154766  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 383  Q
    |||||| |||| ||| |||||| || |||||||| | | |||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||    
T  154767 gaatgagagggctcctgaggccttgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctgtatcaacaagatgcatct 154866  T
Q  384 tctctttagtagtctatttcataagaactccacag 418  Q
    ||| || |||||   ||| ||||||||||||||||    
T  154867 tcttttcagtagctcattccataagaactccacag 154901  T

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Target: scaffold0002; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 183 - 317
Target Start/End: Original strand, 151550 - 151681
Alignment:
Q  183 ttgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacacc 282  Q
    ||||||||||||| ||||||||||||| |||||| ||||| ||||| |||| |||||||||||||  || |||||||||||| | ||| |||||||| ||    
T  151550 ttgtaacacccaatgctgacgagggcggggagtg-tcgccggtgcacaaggcacgacaatgagcg-gtctcgacagcttctagaggaaccgaatcacgcc 151647  T
Q  283 ggaatgatagggatcccgaggccgtgcaggtatgg 317  Q
    | ||||| | |||||| |||||| || ||||||||    
T  151648 gaaatgaga-ggatcctgaggccttgtaggtatgg 151681  T

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Target: scaffold0664 (Bit Score: 100; Significance: 3e-49; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 186 - 409
Target Start/End: Complemental strand, 4207 - 3993
Alignment:
Q  186 taacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccgga 285  Q
    |||||||||||||||||||||||| |||||| ||||          || ||||| ||||||||||||| ||| |||||| ||  || |||||||||| ||    
T  4207 taacacccaaggctgacgagggcggggagtggtcgct---------ggcacgactatgagcgactcccaacaacttctagatctattgaatcacaccaga 4117  T
Q  286 atgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttc 385  Q
    |||| ||||||||||||||||||||||||||| | ||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  4116 atgagagggatcccgaggccgtgcaggtatgggactgcattgttgaaggaatgcttataagaattgtttggtactacctgtatcaacaagatgcatcttc 4017  T
Q  386 tctttagtagtctatttcataaga 409  Q
    | ||| |||| | |||| ||||||    
T  4016 tttttggtagcccattttataaga 3993  T

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Target: scaffold0047 (Bit Score: 96; Significance: 8e-47; HSPs: 3)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 211 - 418
Target Start/End: Complemental strand, 17807 - 17600
Alignment:
Q  211 ggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatgatagggatcccgaggccgtgca 310  Q
    |||||| ||||| |||||  ||| ||||||||||||| ||||||||| |||||  | ||| ||||| ||| | |||||| |||||||| ||||||||| |    
T  17807 ggagtggtcgccggtgcaccaggcacgacaatgagcggctcccgacaacttcttgaggaaccgaatgacatcagaatgagagggatcctgaggccgtgta 17708  T
Q  311 ggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaa 410  Q
    ||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||| ||||   | ||||||||||    
T  17707 ggtatgggactacatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaggatgtatcttctttttggtagctcaattcataagaa 17608  T
Q  411 ctccacag 418  Q
    ||||||||    
T  17607 ctccacag 17600  T

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Target: scaffold0047; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 235 - 418
Target Start/End: Complemental strand, 18319 - 18137
Alignment:
Q  235 acgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaagg 334  Q
    ||||||||||||| |||||||||||||||| | |||  |||||||| |||||||| |||||||| ||||||||| |||||||  | | ||| ||||||||    
T  18319 acgacaatgagcggctcccgacagcttctagaggaactgaatcacatcggaatgagagggatcctgaggccgtgtaggtatgtgactacatagttgaagg 18220  T
Q  335 aaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    ||  ||||||||||||||||| |||||||||||||||||||||||||||| | ||| ||||   ||| ||||||||||||||||    
T  18219 aagacttataagaattgtttgatactacctatatcaacaagatgcatctt-tttttggtagctaattccataagaactccacag 18137  T

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Target: scaffold0047; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 184 - 280
Target Start/End: Complemental strand, 17916 - 17819
Alignment:
Q  184 tgtaacacccaaggctgacgagggc-gaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcaca 280  Q
    ||||||||||| ||||||||||||  | |||||| ||||| |||||  ||| ||||||||||||| |||||||||||||||| | ||| |||||||||    
T  17916 tgtaacacccacggctgacgagggaaggggagtggtcgccggtgcacgaggcacgacaatgagcggctcccgacagcttctagaggaaccgaatcaca 17819  T

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Target: scaffold0322 (Bit Score: 93; Significance: 5e-45; HSPs: 2)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 274 - 418
Target Start/End: Original strand, 18966 - 19110
Alignment:
Q  274 aatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaaca 373  Q
    ||||||| |||||||| |||||||| |||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18966 aatcacatcggaatgagagggatccagaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaaca 19065  T
Q  374 agatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    |||| |||||||| ||  ||||   ||||||||||||||||||||    
T  19066 agattcatcttcttttcggtagctcatttcataagaactccacag 19110  T

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Target: scaffold0322; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 273 - 336
Target Start/End: Complemental strand, 18268 - 18205
Alignment:
Q  273 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaa 336  Q
    |||||||| |||||||| |||||||| |||||||||||||||||| | ||||||||||||||||    
T  18268 gaatcacatcggaatgagagggatccagaggccgtgcaggtatgggactgcatggttgaaggaa 18205  T

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Target: scaffold0499 (Bit Score: 87; Significance: 2e-41; HSPs: 1)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 272 - 418
Target Start/End: Complemental strand, 2199 - 2053
Alignment:
Q  272 cgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaa 371  Q
    ||||||||||| |||||| |||| ||| |||||||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  2199 cgaatcacaccagaatgaaagggttcctgaggccgtgcaggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaa 2100  T
Q  372 caagatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    ||||||||||||||| ||  ||||   ||| ||||||||||||||||    
T  2099 caagatgcatcttcttttcggtagctcattccataagaactccacag 2053  T

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Target: scaffold0024 (Bit Score: 85; Significance: 3e-40; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 274 - 418
Target Start/End: Original strand, 105720 - 105864
Alignment:
Q  274 aatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaaca 373  Q
    ||||||| |||||||| |||||||| |||||||| ||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  105720 aatcacatcggaatgagagggatcctgaggccgtacaggtatggaactgcagggttgaaggaaggcttataagaattgtttggtactacctatatcaaca 105819  T
Q  374 agatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    | ||||||||||| ||  ||||   ||| ||||||||||||||||    
T  105820 aaatgcatcttcttttcggtagctcattccataagaactccacag 105864  T

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Target: scaffold0007 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 273 - 386
Target Start/End: Complemental strand, 142421 - 142308
Alignment:
Q  273 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 372  Q
    |||||||| |||||||| |||||||| |||||||||||||||||| | | |||||||||||||| | |||||||||||||||||||||||||||||||||    
T  142421 gaatcacatcggaatgagagggatcctgaggccgtgcaggtatgggacttcatggttgaaggaatgtttataagaattgtttggtactacctatatcaac 142322  T
Q  373 aagatgcatcttct 386  Q
    ||||||||||||||    
T  142321 aagatgcatcttct 142308  T

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Target: scaffold0040 (Bit Score: 81; Significance: 7e-38; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 273 - 413
Target Start/End: Complemental strand, 2357 - 2217
Alignment:
Q  273 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 372  Q
    |||||||| |||||||| | ||||||  ||||||||||||||||| | | |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  2357 gaatcacatcggaatgagaaggatcctaaggccgtgcaggtatgggactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaac 2258  T
Q  373 aagatgcatcttctctttagtagtctatttcataagaactc 413  Q
    |||||||||||||| ||  ||||  |||| |||||||||||    
T  2257 aagatgcatcttcttttcggtagcttattccataagaactc 2217  T

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Target: scaffold0020 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 273 - 418
Target Start/End: Complemental strand, 107610 - 107465
Alignment:
Q  273 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 372  Q
    |||||||| |||||||| |||||| | |||||||| ||||||||| | |||||||||||||||| |||||||||||||||||| ||||||| ||||||||    
T  107610 gaatcacatcggaatgagagggattctgaggccgtacaggtatgggactgcatggttgaaggaaggcttataagaattgtttgatactaccaatatcaac 107511  T
Q  373 aagatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    |||||||||||||| ||  ||||   ||| ||||||||||||||||    
T  107510 aagatgcatcttcttttcggtagctcattccataagaactccacag 107465  T

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Target: scaffold0018 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 273 - 418
Target Start/End: Original strand, 10299 - 10444
Alignment:
Q  273 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 372  Q
    |||||||| |||||||| |||||||| ||||||||||| |||||| | ||||||||| |||||| ||||||||||||||||| |||||||||||||||||    
T  10299 gaatcacatcggaatgagagggatcctgaggccgtgcatgtatgggactgcatggttcaaggaaggcttataagaattgtttagtactacctatatcaac 10398  T
Q  373 aagatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    |||||||||||| | ||  ||||   ||| ||||||||||||||||    
T  10399 aagatgcatctttttttcggtagctcattccataagaactccacag 10444  T

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Target: scaffold0005 (Bit Score: 74; Significance: 1e-33; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 273 - 386
Target Start/End: Original strand, 245085 - 245198
Alignment:
Q  273 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 372  Q
    |||||||| |||||||| |||||||| |||||| || |||||||| | | |||||||||||| | |||||||||||||||||||||||||||||||||||    
T  245085 gaatcacatcggaatgagagggatcctgaggccatgtaggtatgggactacatggttgaagggaggcttataagaattgtttggtactacctatatcaac 245184  T
Q  373 aagatgcatcttct 386  Q
    ||||||||||||||    
T  245185 aagatgcatcttct 245198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 285 - 418
Target Start/End: Original strand, 245526 - 245659
Alignment:
Q  285 aatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatctt 384  Q
    ||||| |||||||  ||| ||||| |||||||| | | |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  245526 aatgaaagggatcttgagtccgtgtaggtatgggacttcatggttgaagggatgcttataagaattgtttggtactacctatatcaacaagatgcatctt 245625  T
Q  385 ctctttagtagtctatttcataagaactccacag 418  Q
    || || ||||| |||   ||||||||||||||||    
T  245626 cttttcagtagcctaaaccataagaactccacag 245659  T

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Target: scaffold0022 (Bit Score: 70; Significance: 3e-31; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 273 - 386
Target Start/End: Complemental strand, 162825 - 162712
Alignment:
Q  273 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 372  Q
    |||| ||| |||||||| |||||||| |||||||| ||||||||  | ||||||||||||||||  |||||||||||||||||||||||||||||| |||    
T  162825 gaattacatcggaatgagagggatcctgaggccgtacaggtatgtgactgcatggttgaaggaagacttataagaattgtttggtactacctatattaac 162726  T
Q  373 aagatgcatcttct 386  Q
    ||||||||||||||    
T  162725 aagatgcatcttct 162712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 307 - 418
Target Start/End: Complemental strand, 69928 - 69817
Alignment:
Q  307 tgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcata 406  Q
    ||||||||||  | ||||| |||||||||| |||||||| ||||||||||||||||||||||||||| |||||||||| | || | |||   ||| ||||    
T  69928 tgcaggtatgagactgcatcgttgaaggaatgcttataataattgtttggtactacctatatcaacatgatgcatctttttttcattagctcattccata 69829  T
Q  407 agaactccacag 418  Q
    ||||||||||||    
T  69828 agaactccacag 69817  T

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Target: scaffold0557 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 323 - 418
Target Start/End: Original strand, 2154 - 2249
Alignment:
Q  323 catggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||| ||| |||| | ||| | ||||||||||||||    
T  2154 catggttgaaggaaggcttataagaattgtttggtactccctatataaacaagatgcatcttctttttggtagcccattccttaagaactccacag 2249  T

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Target: scaffold0557; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 184 - 317
Target Start/End: Original strand, 660 - 793
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 283  Q
    ||||||||| |||||||||||||  | ||||||| |||  ||||| |||||||||||||||||| ||||||||| ||| || | ||| ||||||||| ||    
T  660 tgtaacacctaaggctgacgaggcaggggagtgaccgctggtgcacaaggtacgacaatgagcggctcccgacaacttatagaggaaccgaatcacatcg 759  T
Q  284 gaatgatagggatcccgaggccgtgcaggtatgg 317  Q
    |||||| |||||||| |||||| || ||||||||    
T  760 gaatgagagggatcctgaggccatgtaggtatgg 793  T

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Target: scaffold0442 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 184 - 317
Target Start/End: Original strand, 2414 - 2548
Alignment:
Q  184 tgtaacacccaaggctgacgagggcgagg-agtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacacc 282  Q
    ||||||||| ||||||||| ||||| ||| |||||||||| ||||| |||| ||||||||||||| ||||||| | ||| || | ||| ||||||||| |    
T  2414 tgtaacacctaaggctgacaagggcaagggagtgatcgccggtgcacaaggcacgacaatgagcggctcccgaaaacttatagaggaaccgaatcacatc 2513  T
Q  283 ggaatgatagggatcccgaggccgtgcaggtatgg 317  Q
     |||||| |||||||| |||||| || ||||||||    
T  2514 agaatgagagggatcctgaggccatgtaggtatgg 2548  T

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Target: scaffold0391 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 327 - 382
Target Start/End: Original strand, 14794 - 14849
Alignment:
Q  327 gttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatc 382  Q
    |||||||||| ||||||||||||||||||||| |||||||||||| ||||||||||    
T  14794 gttgaaggaatgcttataagaattgtttggtaatacctatatcaataagatgcatc 14849  T

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Target: scaffold0101 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 327 - 385
Target Start/End: Original strand, 45439 - 45497
Alignment:
Q  327 gttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttc 385  Q
    ||||||||||  ||||| |||||| ||||||||||||||||||||||||||| ||||||    
T  45439 gttgaaggaagacttatgagaattatttggtactacctatatcaacaagatgtatcttc 45497  T

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Target: scaffold0036 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 338 - 415
Target Start/End: Original strand, 26134 - 26211
Alignment:
Q  338 gcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactcca 415  Q
    |||||||  |||| ||||||||||| |||||||||| |||||||||||| ||| ||||   |||| ||||||||||||    
T  26134 gcttatacaaattttttggtactacatatatcaacatgatgcatcttctttttggtagctcattttataagaactcca 26211  T

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Target: scaffold0389 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 360 - 418
Target Start/End: Complemental strand, 13593 - 13535
Alignment:
Q  360 tacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactccacag 418  Q
    ||||||||||||||||||||||||||| ||  ||||   ||| ||||||||||||||||    
T  13593 tacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacag 13535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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