View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0310_high_2 (Length: 410)

Name: NF0310_high_2
Description: NF0310
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0310_high_2
NF0310_high_2
[»] chr2 (58 HSPs)
chr2 (9-178)||(38945696-38945866)
chr2 (9-137)||(3803513-3803641)
chr2 (9-111)||(20951016-20951118)
chr2 (9-77)||(7263078-7263146)
chr2 (13-79)||(10624412-10624479)
chr2 (13-79)||(18003219-18003286)
chr2 (12-111)||(1101025-1101124)
chr2 (13-79)||(213399-213466)
chr2 (13-78)||(41560064-41560131)
chr2 (9-79)||(39794022-39794092)
chr2 (96-169)||(213510-213583)
chr2 (96-169)||(10624523-10624596)
chr2 (96-169)||(18003330-18003403)
chr2 (12-79)||(41183170-41183238)
chr2 (13-79)||(5334621-5334688)
chr2 (9-77)||(27276321-27276386)
chr2 (59-180)||(24749618-24749739)
chr2 (12-78)||(435402-435469)
chr2 (60-186)||(27276395-27276521)
chr2 (12-79)||(41008874-41008942)
chr2 (99-169)||(41559984-41560054)
chr2 (60-109)||(1096598-1096647)
chr2 (96-169)||(5334519-5334592)
chr2 (60-124)||(3795325-3795389)
chr2 (60-111)||(1149473-1149524)
chr2 (133-180)||(42505856-42505903)
chr2 (60-178)||(10424774-10424891)
chr2 (60-178)||(28477088-28477205)
chr2 (133-179)||(30497043-30497089)
chr2 (60-178)||(34639335-34639453)
chr2 (133-179)||(39800746-39800792)
chr2 (14-60)||(45475519-45475565)
chr2 (133-178)||(15831061-15831106)
chr2 (133-178)||(17420502-17420547)
chr2 (59-120)||(24607588-24607649)
chr2 (133-178)||(39793897-39793942)
chr2 (122-178)||(21998148-21998204)
chr2 (60-120)||(25184851-25184910)
chr2 (118-178)||(28468575-28468635)
chr2 (60-180)||(36510877-36510996)
chr2 (133-180)||(17426492-17426539)
chr2 (12-74)||(24607525-24607588)
chr2 (14-79)||(19187171-19187237)
chr2 (60-110)||(35493362-35493412)
chr2 (133-174)||(3940823-3940864)
chr2 (60-101)||(25964822-25964863)
chr2 (133-178)||(42499687-42499732)
chr2 (60-113)||(43491108-43491161)
chr2 (12-57)||(43950190-43950235)
chr2 (133-174)||(43978474-43978515)
chr2 (60-120)||(2917675-2917735)
chr2 (60-112)||(29397910-29397962)
chr2 (60-180)||(30803039-30803158)
chr2 (60-152)||(39489144-39489235)
chr2 (12-79)||(41053514-41053582)
chr2 (60-120)||(43943681-43943741)
chr2 (60-120)||(45475432-45475492)
chr2 (59-111)||(45479814-45479866)
[»] chr7 (41 HSPs)
chr7 (9-178)||(618694-618864)
chr7 (12-122)||(29593301-29593411)
chr7 (13-169)||(30786489-30786651)
chr7 (9-79)||(18105432-18105503)
chr7 (13-79)||(43624093-43624159)
chr7 (13-79)||(43033033-43033100)
chr7 (13-79)||(45763439-45763506)
chr7 (12-92)||(47741784-47741864)
chr7 (9-79)||(42499468-42499538)
chr7 (96-178)||(45763313-45763395)
chr7 (96-169)||(43624203-43624276)
chr7 (60-122)||(42499399-42499461)
chr7 (59-120)||(27453614-27453675)
chr7 (96-169)||(43032916-43032989)
chr7 (60-120)||(9494827-9494887)
chr7 (60-180)||(12210611-12210730)
chr7 (118-178)||(17465792-17465852)
chr7 (118-178)||(17587362-17587422)
chr7 (12-79)||(47060985-47061053)
chr7 (60-120)||(47776324-47776384)
chr7 (133-183)||(20566453-20566503)
chr7 (62-112)||(21188423-21188473)
chr7 (133-178)||(15074322-15074367)
chr7 (133-178)||(20564007-20564052)
chr7 (133-178)||(42508121-42508166)
chr7 (122-178)||(10098200-10098256)
chr7 (60-120)||(47060919-47060978)
chr7 (60-111)||(29592544-29592595)
chr7 (64-111)||(45361650-45361697)
chr7 (60-178)||(7004-7121)
chr7 (133-187)||(18105298-18105352)
chr7 (133-178)||(10098267-10098312)
chr7 (63-104)||(11629739-11629780)
chr7 (59-112)||(34622499-34622552)
chr7 (133-178)||(35610509-35610554)
chr7 (133-178)||(41880448-41880493)
chr7 (133-185)||(10168352-10168404)
chr7 (133-185)||(10175877-10175929)
chr7 (59-103)||(39460562-39460606)
chr7 (122-174)||(40141309-40141361)
chr7 (94-178)||(42795135-42795218)
[»] chr6 (23 HSPs)
chr6 (9-179)||(18346974-18347145)
chr6 (9-79)||(13388651-13388722)
chr6 (13-79)||(1612694-1612761)
chr6 (9-79)||(28249944-28250015)
chr6 (14-79)||(31146432-31146498)
chr6 (96-169)||(1612805-1612878)
chr6 (60-111)||(28362752-28362803)
chr6 (14-111)||(23985955-23986053)
chr6 (60-125)||(31146360-31146425)
chr6 (60-120)||(31768745-31768805)
chr6 (12-49)||(2052573-2052610)
chr6 (133-178)||(27616649-27616694)
chr6 (12-75)||(7363263-7363327)
chr6 (12-75)||(18606107-18606171)
chr6 (60-111)||(8193230-8193281)
chr6 (133-180)||(11688046-11688093)
chr6 (14-49)||(13479793-13479828)
chr6 (60-111)||(32643542-32643593)
chr6 (60-178)||(2109452-2109569)
chr6 (60-178)||(25554640-25554757)
chr6 (59-108)||(7361195-7361244)
chr6 (133-178)||(11694154-11694199)
chr6 (98-178)||(32691085-32691164)
[»] chr8 (56 HSPs)
chr8 (300-410)||(354810-354920)
chr8 (13-169)||(30305516-30305674)
chr8 (9-122)||(31957824-31957937)
chr8 (12-111)||(45454407-45454507)
chr8 (13-79)||(7340126-7340193)
chr8 (13-79)||(32378868-32378935)
chr8 (13-79)||(32432823-32432890)
chr8 (12-107)||(41744667-41744762)
chr8 (9-79)||(1114802-1114871)
chr8 (96-169)||(7340009-7340082)
chr8 (96-173)||(8423847-8423924)
chr8 (96-169)||(32378979-32379052)
chr8 (96-169)||(32432934-32433007)
chr8 (12-79)||(35966696-35966763)
chr8 (14-79)||(18205845-18205911)
chr8 (59-179)||(1114676-1114796)
chr8 (12-79)||(2146903-2146971)
chr8 (12-111)||(39752970-39753069)
chr8 (60-187)||(5533046-5533172)
chr8 (14-79)||(22577724-22577790)
chr8 (60-120)||(41743882-41743942)
chr8 (63-122)||(5304168-5304227)
chr8 (60-111)||(38872951-38873002)
chr8 (133-179)||(25628-25674)
chr8 (62-120)||(3395884-3395942)
chr8 (14-79)||(4866493-4866559)
chr8 (59-120)||(43188065-43188127)
chr8 (133-178)||(489720-489765)
chr8 (59-120)||(35966769-35966830)
chr8 (60-125)||(38135630-38135695)
chr8 (133-178)||(42485632-42485677)
chr8 (122-178)||(184635-184691)
chr8 (60-120)||(20549253-20549313)
chr8 (122-178)||(36678012-36678068)
chr8 (60-120)||(40077271-40077331)
chr8 (64-111)||(1116213-1116260)
chr8 (133-180)||(2416135-2416182)
chr8 (122-177)||(15036785-15036840)
chr8 (60-111)||(28646268-28646319)
chr8 (60-111)||(28650852-28650903)
chr8 (60-111)||(35962308-35962359)
chr8 (60-178)||(2335169-2335286)
chr8 (60-110)||(26451482-26451532)
chr8 (60-178)||(28617503-28617620)
chr8 (60-178)||(38604269-38604386)
chr8 (60-125)||(21406254-21406319)
chr8 (60-125)||(21800746-21800811)
chr8 (60-100)||(39495-39535)
chr8 (94-178)||(915690-915773)
chr8 (60-120)||(7168080-7168140)
chr8 (64-120)||(7172612-7172668)
chr8 (64-120)||(18441466-18441522)
chr8 (142-178)||(23022390-23022426)
chr8 (94-178)||(31185500-31185583)
chr8 (60-112)||(35389508-35389560)
chr8 (12-60)||(35389587-35389635)
[»] scaffold0260 (1 HSPs)
scaffold0260 (13-169)||(11723-11880)
[»] chr1 (67 HSPs)
chr1 (13-169)||(20349400-20349557)
chr1 (9-122)||(5077931-5078044)
chr1 (9-110)||(41453840-41453942)
chr1 (9-122)||(23913847-23913960)
chr1 (9-106)||(29356634-29356732)
chr1 (9-122)||(44465586-44465700)
chr1 (9-111)||(30905772-30905873)
chr1 (9-79)||(15047341-15047412)
chr1 (13-79)||(31945808-31945875)
chr1 (13-79)||(3948409-3948476)
chr1 (13-79)||(3983146-3983213)
chr1 (13-79)||(38776073-38776140)
chr1 (61-159)||(15047235-15047333)
chr1 (9-77)||(44621061-44621129)
chr1 (14-111)||(4516032-4516130)
chr1 (9-79)||(6562106-6562175)
chr1 (9-178)||(22397754-22397923)
chr1 (96-169)||(3983029-3983102)
chr1 (96-169)||(31945919-31945992)
chr1 (96-169)||(38776184-38776257)
chr1 (12-79)||(50117724-50117791)
chr1 (12-77)||(9711597-9711663)
chr1 (60-178)||(30910024-30910142)
chr1 (60-180)||(4883166-4883285)
chr1 (12-79)||(8460043-8460111)
chr1 (59-122)||(6562181-6562244)
chr1 (60-126)||(6557901-6557967)
chr1 (14-78)||(46973263-46973328)
chr1 (96-163)||(3948460-3948527)
chr1 (60-111)||(41804054-41804105)
chr1 (60-111)||(44470032-44470083)
chr1 (60-111)||(52802131-52802182)
chr1 (9-71)||(13629459-13629521)
chr1 (12-77)||(37014952-37015018)
chr1 (12-60)||(1654823-1654871)
chr1 (60-112)||(11183186-11183238)
chr1 (60-120)||(52805554-52805614)
chr1 (60-111)||(46973205-46973256)
chr1 (60-118)||(19499133-19499191)
chr1 (60-114)||(40057675-40057729)
chr1 (133-178)||(3732447-3732492)
chr1 (133-178)||(19924689-19924734)
chr1 (133-178)||(30889995-30890040)
chr1 (60-180)||(586626-586745)
chr1 (12-79)||(19054196-19054264)
chr1 (60-120)||(23276129-23276189)
chr1 (60-120)||(23359370-23359430)
chr1 (64-120)||(27485051-27485107)
chr1 (122-178)||(38633236-38633292)
chr1 (94-178)||(43011762-43011845)
chr1 (60-119)||(8458978-8459036)
chr1 (14-76)||(19499060-19499123)
chr1 (60-111)||(27115844-27115895)
chr1 (60-111)||(35258893-35258944)
chr1 (60-111)||(46141783-46141834)
chr1 (64-111)||(49927538-49927585)
chr1 (14-60)||(7981087-7981133)
chr1 (70-120)||(19054051-19054101)
chr1 (60-178)||(19914401-19914518)
chr1 (60-106)||(48751431-48751477)
chr1 (60-122)||(51289981-51290043)
chr1 (13-77)||(13173896-13173961)
chr1 (133-178)||(13629338-13629383)
chr1 (133-178)||(26879389-26879434)
chr1 (30-79)||(50117811-50117860)
chr1 (60-120)||(9711672-9711732)
chr1 (16-79)||(22345319-22345383)
[»] chr5 (45 HSPs)
chr5 (9-178)||(37820823-37820986)
chr5 (13-169)||(14279792-14279950)
chr5 (9-151)||(13568044-13568187)
chr5 (9-107)||(7021827-7021926)
chr5 (9-122)||(27867789-27867903)
chr5 (9-79)||(25897023-25897093)
chr5 (9-78)||(1035244-1035313)
chr5 (12-79)||(28387328-28387395)
chr5 (9-79)||(34077826-34077897)
chr5 (9-62)||(28886362-28886415)
chr5 (9-79)||(11033406-11033476)
chr5 (12-79)||(4204157-4204225)
chr5 (60-120)||(39743169-39743229)
chr5 (60-120)||(25889986-25890046)
chr5 (14-77)||(21979628-21979691)
chr5 (59-122)||(28387259-28387322)
chr5 (60-111)||(34122525-34122576)
chr5 (9-60)||(38860146-38860197)
chr5 (60-118)||(8702219-8702277)
chr5 (60-122)||(17966907-17966969)
chr5 (14-79)||(18538283-18538349)
chr5 (14-79)||(33993339-33993405)
chr5 (12-76)||(34123869-34123933)
chr5 (70-137)||(7017487-7017554)
chr5 (60-151)||(28388540-28388631)
chr5 (60-178)||(3891418-3891535)
chr5 (133-179)||(11027028-11027074)
chr5 (12-73)||(31098881-31098943)
chr5 (133-178)||(19041211-19041256)
chr5 (133-178)||(28241893-28241938)
chr5 (133-178)||(38860262-38860307)
chr5 (60-125)||(39742562-39742627)
chr5 (60-112)||(34682257-34682309)
chr5 (60-111)||(17965850-17965901)
chr5 (60-111)||(18307255-18307306)
chr5 (133-179)||(11033556-11033602)
chr5 (133-175)||(28886487-28886529)
chr5 (60-110)||(38968097-38968147)
chr5 (60-120)||(1397371-1397431)
chr5 (60-120)||(7757317-7757377)
chr5 (65-117)||(18310047-18310099)
chr5 (60-120)||(18538356-18538416)
chr5 (59-111)||(25897099-25897151)
chr5 (60-120)||(34123956-34124016)
chr5 (60-120)||(41798810-41798870)
[»] chr4 (54 HSPs)
chr4 (13-169)||(49566422-49566580)
chr4 (9-77)||(1087895-1087963)
chr4 (9-79)||(15999743-15999813)
chr4 (9-79)||(9890053-9890123)
chr4 (12-120)||(4768670-4768779)
chr4 (9-79)||(13173293-13173363)
chr4 (60-178)||(15995656-15995774)
chr4 (9-79)||(19073599-19073669)
chr4 (50-142)||(3403818-3403910)
chr4 (60-137)||(19069162-19069239)
chr4 (59-178)||(50274694-50274813)
chr4 (60-122)||(9889984-9890046)
chr4 (60-178)||(15999820-15999938)
chr4 (21-111)||(30042478-30042568)
chr4 (13-76)||(4975827-4975891)
chr4 (12-79)||(4979863-4979931)
chr4 (12-79)||(21470962-21471030)
chr4 (14-100)||(18581280-18581367)
chr4 (133-178)||(13173168-13173213)
chr4 (64-111)||(1041936-1041983)
chr4 (133-180)||(13182192-13182239)
chr4 (60-111)||(36004297-36004348)
chr4 (60-179)||(40833631-40833749)
chr4 (60-178)||(21022909-21023026)
chr4 (62-120)||(39588084-39588142)
chr4 (133-179)||(41793264-41793310)
chr4 (133-178)||(1089678-1089723)
chr4 (133-178)||(6181885-6181930)
chr4 (133-178)||(49090381-49090426)
chr4 (12-60)||(3450026-3450074)
chr4 (60-120)||(37395212-37395272)
chr4 (60-152)||(38369203-38369294)
chr4 (59-111)||(41023387-41023439)
chr4 (12-60)||(44049177-44049225)
chr4 (60-180)||(50278819-50278939)
chr4 (122-178)||(52529147-52529203)
chr4 (122-178)||(54634098-54634154)
chr4 (60-104)||(55407814-55407858)
chr4 (60-111)||(21472505-21472556)
chr4 (133-180)||(30726835-30726882)
chr4 (133-180)||(41801031-41801078)
chr4 (14-100)||(51644447-51644534)
chr4 (14-111)||(17139626-17139723)
chr4 (60-110)||(33383807-33383857)
chr4 (60-178)||(51037489-51037606)
chr4 (60-125)||(19994310-19994375)
chr4 (122-179)||(26932517-26932574)
chr4 (60-117)||(29700323-29700380)
chr4 (62-111)||(34154425-34154474)
chr4 (133-178)||(40352300-40352345)
chr4 (142-178)||(1087794-1087830)
chr4 (98-178)||(7484665-7484744)
chr4 (12-60)||(11494622-11494670)
chr4 (63-111)||(37394249-37394297)
[»] chr3 (71 HSPs)
chr3 (13-169)||(8160942-8161100)
chr3 (9-125)||(50953289-50953405)
chr3 (9-122)||(23443076-23443189)
chr3 (60-169)||(6740848-6740957)
chr3 (13-79)||(30947600-30947667)
chr3 (9-110)||(2745175-2745276)
chr3 (9-77)||(14398596-14398664)
chr3 (9-77)||(48250813-48250881)
chr3 (13-79)||(3948788-3948855)
chr3 (9-79)||(9429792-9429863)
chr3 (9-79)||(13747662-13747733)
chr3 (9-79)||(36817466-36817535)
chr3 (60-180)||(2743330-2743450)
chr3 (12-119)||(6505922-6506031)
chr3 (96-169)||(30947711-30947784)
chr3 (60-181)||(50957687-50957808)
chr3 (60-151)||(14402991-14403082)
chr3 (60-186)||(9429870-9429996)
chr3 (96-169)||(3948671-3948744)
chr3 (12-77)||(46993177-46993242)
chr3 (12-79)||(7837654-7837722)
chr3 (60-136)||(13743270-13743345)
chr3 (60-179)||(12897758-12897876)
chr3 (12-78)||(29929486-29929553)
chr3 (12-78)||(29978640-29978707)
chr3 (60-111)||(41137719-41137770)
chr3 (9-51)||(6740949-6740991)
chr3 (9-71)||(16444663-16444725)
chr3 (12-76)||(7842963-7843028)
chr3 (11-79)||(21956150-21956219)
chr3 (60-120)||(42756151-42756211)
chr3 (59-111)||(50216874-50216926)
chr3 (60-178)||(16851061-16851175)
chr3 (60-111)||(41802999-41803050)
chr3 (133-180)||(46388890-46388937)
chr3 (60-178)||(28817022-28817139)
chr3 (60-110)||(30256024-30256074)
chr3 (60-130)||(48888723-48888792)
chr3 (60-110)||(49219812-49219862)
chr3 (133-178)||(2968019-2968064)
chr3 (133-178)||(29008820-29008865)
chr3 (133-178)||(34045342-34045387)
chr3 (117-178)||(35743352-35743413)
chr3 (122-178)||(1835084-1835140)
chr3 (59-111)||(7843037-7843089)
chr3 (64-112)||(9582547-9582595)
chr3 (98-178)||(12898746-12898825)
chr3 (60-120)||(20918032-20918092)
chr3 (60-120)||(20926994-20927054)
chr3 (60-120)||(28611121-28611181)
chr3 (64-140)||(34694459-34694535)
chr3 (60-120)||(48250890-48250950)
chr3 (60-111)||(4002526-4002577)
chr3 (60-111)||(13747739-13747790)
chr3 (60-111)||(19341615-19341666)
chr3 (12-78)||(29918287-29918354)
chr3 (12-78)||(29967440-29967507)
chr3 (60-111)||(34691626-34691677)
chr3 (59-122)||(36817541-36817604)
chr3 (133-180)||(42904276-42904323)
chr3 (63-109)||(14398538-14398584)
chr3 (60-178)||(27739588-27739705)
chr3 (133-179)||(34051440-34051486)
chr3 (133-183)||(49144550-49144600)
chr3 (60-178)||(50998701-50998818)
chr3 (133-178)||(16444542-16444587)
chr3 (133-178)||(46702119-46702164)
chr3 (60-120)||(7247881-7247941)
chr3 (98-154)||(26245294-26245349)
chr3 (122-178)||(41844447-41844503)
chr3 (60-120)||(46344929-46344989)
[»] scaffold0116 (2 HSPs)
scaffold0116 (9-122)||(11291-11404)
scaffold0116 (60-148)||(15976-16064)
[»] scaffold0744 (1 HSPs)
scaffold0744 (9-79)||(367-437)
[»] scaffold0494 (2 HSPs)
scaffold0494 (9-79)||(916-986)
scaffold0494 (60-179)||(764-883)
[»] scaffold0038 (1 HSPs)
scaffold0038 (9-79)||(50106-50177)
[»] scaffold0361 (2 HSPs)
scaffold0361 (10-79)||(4345-4414)
scaffold0361 (59-111)||(4420-4472)
[»] scaffold0219 (1 HSPs)
scaffold0219 (12-112)||(15703-15804)
[»] scaffold0341 (2 HSPs)
scaffold0341 (9-79)||(17296-17365)
scaffold0341 (59-122)||(17371-17434)
[»] scaffold0794 (1 HSPs)
scaffold0794 (12-79)||(5330-5398)
[»] scaffold2089 (1 HSPs)
scaffold2089 (14-77)||(287-351)
[»] scaffold0012 (1 HSPs)
scaffold0012 (60-111)||(232549-232600)
[»] scaffold0184 (1 HSPs)
scaffold0184 (59-179)||(17964-18084)
[»] scaffold0078 (1 HSPs)
scaffold0078 (59-179)||(54760-54880)
[»] scaffold0101 (1 HSPs)
scaffold0101 (133-178)||(41150-41195)
[»] scaffold0016 (1 HSPs)
scaffold0016 (98-179)||(69280-69360)
[»] scaffold0201 (1 HSPs)
scaffold0201 (60-120)||(22395-22455)
[»] scaffold0147 (1 HSPs)
scaffold0147 (12-60)||(807-855)
[»] scaffold1606 (1 HSPs)
scaffold1606 (133-178)||(55-100)
[»] scaffold0014 (1 HSPs)
scaffold0014 (133-178)||(84481-84526)
[»] scaffold0340 (1 HSPs)
scaffold0340 (26-77)||(1141-1193)
[»] scaffold0169 (1 HSPs)
scaffold0169 (60-104)||(1678-1722)


Alignment Details
Target: chr2 (Bit Score: 127; Significance: 2e-65; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 9 - 178
Target Start/End: Complemental strand, 38945866 - 38945696
Alignment:
Q  9 gaagaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacattt-cctcggcagttaactacagtcggattttaaattcctcggcagtta 107  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||| ||||||| |||||||||||||||||    
T  38945866 gaagaaaatagtgtgtagggggagcaggtagctgtttcatcagatgaaacattttcctcggcagttaactgcagccggatttcaaattcctcggcagtta 38945767  T
Q  108 actgttgagggggtatttgcgtaaattactcgtatggcacagccatactatatgtggtaacatcaattctc 178  Q
    ||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||    
T  38945766 actgccgagggggtatttgcgtaaattactcgtgtggcacagccatactatatgtgggaacagcaattctc 38945696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 9 - 137
Target Start/End: Original strand, 3803513 - 3803641
Alignment:
Q  9 gaagaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacatttcctcggcagttaactacagtcggattttaaattcctcggcagttaa 108  Q
    ||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||    
T  3803513 gaagaaaatagtgtgtagggggagcaggtggctgtttcatctaatgaaacatttcctcggcagttaactgcagccggatttcaaattcctcggcagttaa 3803612  T
Q  109 ctgttgagggggtatttgcgtaaattact 137  Q
    |||  || ||| |||||| |||| |||||    
T  3803613 ctgccgatgggatatttgggtaatttact 3803641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 9 - 111
Target Start/End: Original strand, 20951016 - 20951118
Alignment:
Q  9 gaagaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacatttcctcggcagttaactacagtcggattttaaattcctcggcagttaa 108  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||| ||| ||||||| ||||||||||||||||||    
T  20951016 gaagaaaatagtgtgtagggggagcaggtggctgtttcatctgatgaaacatgtcctcggcagttaactgcagccggatttcaaattcctcggcagttaa 20951115  T
Q  109 ctg 111  Q
    |||    
T  20951116 ctg 20951118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 7263146 - 7263078
Alignment:
Q  9 gaagaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacatttcctcggcagttaact 77  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  7263146 gaagaaaatagtgtgtagggggagcaggtggctgtttcatctgatgaaacatttcctcggcagttaact 7263078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 10624412 - 10624479
Alignment:
Q  13 aaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacattt-cctcggcagttaactac 79  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  10624412 aaaatagtgtgtagggggagcaggtagctgtttcatcgtatgaaacatttccctcggcagttaactac 10624479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 18003219 - 18003286
Alignment:
Q  13 aaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaaca-tttcctcggcagttaactac 79  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18003219 aaaatagtgtgcagggggagcaggtagctgtttcatcggatgaaacattttcctcggcagttaactac 18003286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 12 - 111
Target Start/End: Original strand, 1101025 - 1101124
Alignment:
Q  12 gaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacattt-cctcggcagttaactacagtcggattttaaattcctcggcagttaact 110  Q
    ||||||||| |||||||| |||||||  || ||||||| |||||||||||| ||||||||||||||||||| ||||||| |||||| |||||||||||||    
T  1101025 gaaaatagtatgtagggg-agcaggtgactttttcatctgatgaaacattttcctcggcagttaactacagccggatttcaaattcatcggcagttaact 1101123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 213399 - 213466
Alignment:
Q  13 aaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaaca-tttcctcggcagttaactac 79  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  213399 aaaataatgtgtagggggagcaggtagctgtttcatcgtatgaaacattttcctcggcagttaactac 213466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 41560131 - 41560064
Alignment:
Q  13 aaaatagtgtgtaggggg-agcaggtagctgtttcatcggatgaaaca-tttcctcggcagttaacta 78  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  41560131 aaaatagtgtgtaggggggagcaggtagctgtttcatcggatgaaacattttcctcggcagttaacta 41560064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 39794092 - 39794022
Alignment:
Q  9 gaagaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacatttcctcggcagttaactac 79  Q
    ||||||||||| ||||||||||||||||| ||||||||||| |||||||||| |||||||||||| |||||    
T  39794092 gaagaaaatagagtgtagggggagcaggtggctgtttcatctgatgaaacatatcctcggcagtttactac 39794022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 96 - 169
Target Start/End: Original strand, 213510 - 213583
Alignment:
Q  96 cctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactatatgtggtaaca 169  Q
    ||||||||||||||||  ||| |||||||||||||||||||| || ||||||||||||||||||||||| ||||    
T  213510 cctcggcagttaactgccgagagggtatttgcgtaaattactggtgtggcacagccatactatatgtgggaaca 213583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 96 - 169
Target Start/End: Original strand, 10624523 - 10624596
Alignment:
Q  96 cctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactatatgtggtaaca 169  Q
    ||||||||||||||||  ||| |||||||||||||||||||| || ||||||||||||||||||||||| ||||    
T  10624523 cctcggcagttaactgccgagagggtatttgcgtaaattactggtgtggcacagccatactatatgtgggaaca 10624596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 96 - 169
Target Start/End: Original strand, 18003330 - 18003403
Alignment:
Q  96 cctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactatatgtggtaaca 169  Q
    ||||||||||||||||  ||| |||||||||||||||||||| || ||||||||||||||||||||||| ||||    
T  18003330 cctcggcagttaactgccgagagggtatttgcgtaaattactggtttggcacagccatactatatgtgggaaca 18003403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 12 - 79
Target Start/End: Original strand, 41183170 - 41183238
Alignment:
Q  12 gaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaaca-tttcctcggcagttaactac 79  Q
    ||||||||| |||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||    
T  41183170 gaaaatagtatgtagggggagcaggtggctgtttcatctgatgaaacattttcctcggcagttaactac 41183238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 13 - 79
Target Start/End: Complemental strand, 5334688 - 5334621
Alignment:
Q  13 aaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaaca-tttcctcggcagttaactac 79  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||| |||||||| |||||||||||    
T  5334688 aaaatagtgtgtagggggagcaggtagctgtatcatcgtatgaaacattttcctcgacagttaactac 5334621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 27276321 - 27276386
Alignment:
Q  9 gaagaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacatttcctcggcagttaact 77  Q
    ||||||||||||||||||||||||||||| ||||||||||   ||||||||||||||||||| ||||||    
T  27276321 gaagaaaatagtgtgtagggggagcaggtggctgtttcat---atgaaacatttcctcggcaattaact 27276386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 59 - 180
Target Start/End: Complemental strand, 24749739 - 24749618
Alignment:
Q  59 atttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactat 158  Q
    |||||||||||||||||||||||||||| || ||||||||||| |||||||||  |||||||||    ||||  ||||| || |||||||||| ||  |     
T  24749739 atttcctcggcagttaactacagtcggaattcaaattcctcggtagttaactgccgagggggtaaaatcgtattttactagtgtggcacagccttatcac 24749640  T
Q  159 atgtggtaacatcaattctctt 180  Q
    |||||| |||| ||||||||||    
T  24749639 atgtgggaacagcaattctctt 24749618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 435469 - 435402
Alignment:
Q  12 gaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacat-ttcctcggcagttaacta 78  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||| || ||||||||| |||||    
T  435469 gaaaatagtgtgtagggggagcaggtggctgtttcatctgatgaaacatatttctcggcagtcaacta 435402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 60 - 186
Target Start/End: Original strand, 27276395 - 27276521
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactata 159  Q
    |||||||||||||||||| ||| ||||||| ||||||||| |||||||||||  |||||||||    ||||  ||||| || |||||||||| ||  | |    
T  27276395 tttcctcggcagttaactgcagccggatttcaaattcctcagcagttaactgccgagggggtaaaatcgtattttactagtgtggcacagccttatcaca 27276494  T
Q  160 tgtggtaacatcaattctcttgaaaat 186  Q
    ||||| |||| |||||||||| |||||    
T  27276495 tgtgggaacaacaattctcttcaaaat 27276521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 12 - 79
Target Start/End: Original strand, 41008874 - 41008942
Alignment:
Q  12 gaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacat-ttcctcggcagttaactac 79  Q
    ||||||||||||||||||||||| || |||||||||||  ||||||||| || ||||||||||||||||    
T  41008874 gaaaatagtgtgtagggggagcatgtggctgtttcatctaatgaaacatatttctcggcagttaactac 41008942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 41560054 - 41559984
Alignment:
Q  99 cggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactatatgtggtaaca 169  Q
    |||||||||||||  |||  ||||||||||||||||||| || ||||||||||||| ||||||||| ||||    
T  41560054 cggcagttaactgccgagaaggtatttgcgtaaattactggtgtggcacagccatagtatatgtgggaaca 41559984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 60 - 109
Target Start/End: Complemental strand, 1096647 - 1096598
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaac 109  Q
    |||||||||||||||||| ||| ||||||| |||||||||||||||||||    
T  1096647 tttcctcggcagttaactgcagccggatttcaaattcctcggcagttaac 1096598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 96 - 169
Target Start/End: Complemental strand, 5334592 - 5334519
Alignment:
Q  96 cctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactatatgtggtaaca 169  Q
    ||||| ||||||||||  ||| || ||||||||||||||||| || |||||||||| |||||||||||| ||||    
T  5334592 cctcgacagttaactgccgagaggatatttgcgtaaattactggtgtggcacagccctactatatgtgggaaca 5334519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 60 - 124
Target Start/End: Complemental strand, 3795389 - 3795325
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggtatt 124  Q
    |||||||||||||||||| ||| ||||||| |||||||||| ||||||||||  |||||| ||||    
T  3795389 tttcctcggcagttaactgcagccggatttcaaattcctcgacagttaactgccgaggggatatt 3795325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 60 - 111
Target Start/End: Complemental strand, 1149524 - 1149473
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactg 111  Q
    |||||||| ||||||||| || |||||||| |||||||||||||||||||||    
T  1149524 tttcctcgacagttaactgcaatcggatttcaaattcctcggcagttaactg 1149473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 42505856 - 42505903
Alignment:
Q  133 ttactcgtatggcacagccatactatatgtggtaacatcaattctctt 180  Q
    |||||||| ||||||||||||||||||||||| |||| ||||||||||    
T  42505856 ttactcgtgtggcacagccatactatatgtgggaacagcaattctctt 42505903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 178
Target Start/End: Complemental strand, 10424891 - 10424774
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactata 159  Q
    ||||||||||||||||||  || || ||||  ||  | |||||||||||||| |||||||  ||||| |||| |||||||| ||||||||||| || | |    
T  10424891 tttcctcggcagttaactgtagccgtatttctaaaacttcggcagttaactgctgaggggc-atttgagtaatttactcgtgtggcacagccaaaccaaa 10424793  T
Q  160 tgtggtaacatcaattctc 178  Q
    ||||| |||| ||||||||    
T  10424792 tgtgggaacagcaattctc 10424774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 178
Target Start/End: Original strand, 28477088 - 28477205
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactata 159  Q
    |||||||||||||||||| ||| || ||||  ||  | ||||||||||||||| ||||||  ||| | |||| || ||||| ||||||| ||| ||||||    
T  28477088 tttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgtcgaggggc-attagagtaatttgctcgtgtggcacaaccaaactata 28477186  T
Q  160 tgtggtaacatcaattctc 178  Q
    ||||| |||| ||||||||    
T  28477187 tgtgggaacaacaattctc 28477205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 179
Target Start/End: Original strand, 30497043 - 30497089
Alignment:
Q  133 ttactcgtatggcacagccatactatatgtggtaacatcaattctct 179  Q
    |||||||| ||||||||||||||||||||||| |||| |||||||||    
T  30497043 ttactcgtgtggcacagccatactatatgtgggaacaacaattctct 30497089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 178
Target Start/End: Original strand, 34639335 - 34639453
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactata 159  Q
    ||||||| |||||||||| ||| |||||||| |||| ||||||||||| |||  ||||||| |     |||||||||| || |||||||||| ||  | |    
T  34639335 tttcctcagcagttaactgcagccggatttttaatttctcggcagttacctgccgagggggcaaaaaagtaaattactagtgtggcacagccttatcaaa 34639434  T
Q  160 tgtggtaacatcaattctc 178  Q
    ||||| |||||||||||||    
T  34639435 tgtgggaacatcaattctc 34639453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 179
Target Start/End: Original strand, 39800746 - 39800792
Alignment:
Q  133 ttactcgtatggcacagccatactatatgtggtaacatcaattctct 179  Q
    |||||||| ||||||||||||||||||||||| |||| |||||||||    
T  39800746 ttactcgtgtggcacagccatactatatgtgggaacagcaattctct 39800792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 60
Target Start/End: Complemental strand, 45475565 - 45475519
Alignment:
Q  14 aaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacat 60  Q
    ||||||| |||||||||||||||| ||||||||||| ||||||||||    
T  45475565 aaatagtatgtagggggagcaggtggctgtttcatctgatgaaacat 45475519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 15831106 - 15831061
Alignment:
Q  133 ttactcgtatggcacagccatactatatgtggtaacatcaattctc 178  Q
    |||||||| ||||||||||||||||||||||| |||| ||||||||    
T  15831106 ttactcgtgtggcacagccatactatatgtgggaacaacaattctc 15831061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 17420547 - 17420502
Alignment:
Q  133 ttactcgtatggcacagccatactatatgtggtaacatcaattctc 178  Q
    |||||||| ||||||||||||||||||||||| |||| ||||||||    
T  17420547 ttactcgtgtggcacagccatactatatgtgggaacagcaattctc 17420502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 59 - 120
Target Start/End: Original strand, 24607588 - 24607649
Alignment:
Q  59 atttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgaggggg 120  Q
    ||||||||||||||||||| ||| ||| |||| || || |||||||||||||| ||||||||    
T  24607588 atttcctcggcagttaactgcagccggttttttaaatcttcggcagttaactgctgaggggg 24607649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 39793942 - 39793897
Alignment:
Q  133 ttactcgtatggcacagccatactatatgtggtaacatcaattctc 178  Q
    |||||||| ||||||||||||||||||||||| |||| ||||||||    
T  39793942 ttactcgtgtggcacagccatactatatgtgggaacagcaattctc 39793897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 178
Target Start/End: Complemental strand, 21998204 - 21998148
Alignment:
Q  122 atttgcgtaaattactcgtatggcacagccatactatatgtggtaacatcaattctc 178  Q
    ||||| |||| |||||||| ||||||| ||| ||||||||||| |||||||||||||    
T  21998204 atttgagtaatttactcgtgtggcacaaccaaactatatgtgggaacatcaattctc 21998148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 120
Target Start/End: Original strand, 25184851 - 25184910
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgaggggg 120  Q
    |||||||||||||||||| ||| ||| ||| |||||||||| |||||||||| ||||||||    
T  25184851 tttcctcggcagttaactgcagccgg-tttcaaattcctcgacagttaactgctgaggggg 25184910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 28468635 - 28468575
Alignment:
Q  118 gggtatttgcgtaaattactcgtatggcacagccatactatatgtggtaacatcaattctc 178  Q
    |||||||||||||  |||||||| ||||||||||| |||||| |||| |||| ||||||||    
T  28468635 gggtatttgcgtattttactcgtgtggcacagccaaactatacgtgggaacaacaattctc 28468575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 180
Target Start/End: Original strand, 36510877 - 36510996
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactata 159  Q
    |||||||||||||||||| ||| || ||||  ||  | ||||||||||||||  || |||||||||| |||| |||||||| || |||||||| || | |    
T  36510877 tttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccga-ggggtatttgagtaatttactcgtgtgacacagccaaaccaaa 36510975  T
Q  160 tgtggtaacatcaattctctt 180  Q
     |||| |||| ||||||||||    
T  36510976 agtgggaacaacaattctctt 36510996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 17426492 - 17426539
Alignment:
Q  133 ttactcgtatggcacagccatactatatgtggtaacatcaattctctt 180  Q
    |||||||| ||||||||||| ||||||||||| |||| ||||||||||    
T  17426492 ttactcgtgtggcacagccaaactatatgtgggaacaacaattctctt 17426539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 24607525 - 24607588
Alignment:
Q  12 gaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacat-ttcctcggcagtta 74  Q
    ||||||||| ||||||||||||||||  |||||||||  |||||||||| ||||||| ||||||    
T  24607525 gaaaatagtatgtagggggagcaggtgactgtttcatttgatgaaacatattcctcgacagtta 24607588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 79
Target Start/End: Original strand, 19187171 - 19187237
Alignment:
Q  14 aaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacat-ttcctcggcagttaactac 79  Q
    ||||||||||||| |||| || ||  |||||||||| |||||||||| || ||||||||||||||||    
T  19187171 aaatagtgtgtagtgggaacaagtgactgtttcatccgatgaaacatatttctcggcagttaactac 19187237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 60 - 110
Target Start/End: Original strand, 35493362 - 35493412
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaact 110  Q
    |||||||||||||||||| |||  || |||| |||||||||||||||||||    
T  35493362 tttcctcggcagttaactgcagctggtttttgaattcctcggcagttaact 35493412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 174
Target Start/End: Original strand, 3940823 - 3940864
Alignment:
Q  133 ttactcgtatggcacagccatactatatgtggtaacatcaat 174  Q
    |||||||| ||||||||||||||||||||||| |||| ||||    
T  3940823 ttactcgtgtggcacagccatactatatgtgggaacaacaat 3940864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 101
Target Start/End: Complemental strand, 25964863 - 25964822
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcgg 101  Q
    |||||||||||||||||| ||| |||||||| ||||||||||    
T  25964863 tttcctcggcagttaactgcagccggatttttaattcctcgg 25964822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 42499732 - 42499687
Alignment:
Q  133 ttactcgtatggcacagccatactatatgtggtaacatcaattctc 178  Q
    |||||||| ||||||||||| ||||||||||| |||| ||||||||    
T  42499732 ttactcgtgtggcacagccaaactatatgtgggaacagcaattctc 42499687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 113
Target Start/End: Complemental strand, 43491161 - 43491108
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgtt 113  Q
    |||||||| ||||||| | ||| ||| | |||||||||||||||||||||||||    
T  43491161 tttcctcgacagttaattgcagccggttattaaattcctcggcagttaactgtt 43491108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 43950190 - 43950235
Alignment:
Q  12 gaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaa 57  Q
    ||||||||||||||||||||| ||||  |||||||||| |||||||    
T  43950190 gaaaatagtgtgtagggggagtaggtgtctgtttcatctgatgaaa 43950235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 174
Target Start/End: Complemental strand, 43978515 - 43978474
Alignment:
Q  133 ttactcgtatggcacagccatactatatgtggtaacatcaat 174  Q
    |||||||| ||||||||||||||||||||||| |||| ||||    
T  43978515 ttactcgtgtggcacagccatactatatgtgggaacagcaat 43978474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 60 - 120
Target Start/End: Complemental strand, 2917735 - 2917675
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgaggggg 120  Q
    ||||||||||||||||||  || ||| |||| |||| |||||||||||||||  |||||||    
T  2917735 tttcctcggcagttaactgtagccggtttttcaatttctcggcagttaactgccgaggggg 2917675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 60 - 112
Target Start/End: Complemental strand, 29397962 - 29397910
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgt 112  Q
    |||||||||||||||||| |||||||||||  |||| ||| ||| ||||||||    
T  29397962 tttcctcggcagttaactgcagtcggatttctaatttctcagcaattaactgt 29397910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 60 - 180
Target Start/End: Original strand, 30803039 - 30803158
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactata 159  Q
    |||||||||||||||||| ||| || ||||  ||  | ||||||||||||||  |||||   ||||| |||| |||||||| ||||||||||| || | |    
T  30803039 tttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgagggac-atttgagtaatttactcgtgtggcacagccaaaccaaa 30803137  T
Q  160 tgtggtaacatcaattctctt 180  Q
    ||||| |||| ||||| ||||    
T  30803138 tgtgggaacaacaattttctt 30803158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 60 - 152
Target Start/End: Complemental strand, 39489235 - 39489144
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagcca 152  Q
    |||||||| ||||||||| |||||| ||||  ||  | ||||||||||||||  || ||| |||||| |||| |||||||| |||||||||||    
T  39489235 tttcctcgacagttaactgcagtcgtatttgtaaaacttcggcagttaactgccgaaggg-tatttgagtaatttactcgtgtggcacagcca 39489144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 79
Target Start/End: Original strand, 41053514 - 41053582
Alignment:
Q  12 gaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacat-ttcctcggcagttaactac 79  Q
    ||||||||| | |||||||| || || | |||||||||  ||||||||| |||||||||||||||||||    
T  41053514 gaaaatagtatatagggggaacatgtggttgtttcatctcatgaaacatattcctcggcagttaactac 41053582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 60 - 120
Target Start/End: Complemental strand, 43943741 - 43943681
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgaggggg 120  Q
    |||||||| ||||||||| ||| ||| | ||||||||||||  ||||||||| ||||||||    
T  43943741 tttcctcgacagttaactgcagccggttattaaattcctcgagagttaactgctgaggggg 43943681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 60 - 120
Target Start/End: Complemental strand, 45475492 - 45475432
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgaggggg 120  Q
    ||||||||||||||||||  || ||| |||| |||| |||||||||||||||  |||||||    
T  45475492 tttcctcggcagttaactgtagccggtttttgaatttctcggcagttaactgccgaggggg 45475432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 111
Target Start/End: Original strand, 45479814 - 45479866
Alignment:
Q  59 atttcctcggcagttaactacagtcggattttaaattcctcggcagttaactg 111  Q
    |||| ||||||| |||||||||||||  |||| |||| |||||||||||||||    
T  45479814 attttctcggcaattaactacagtcgattttttaatttctcggcagttaactg 45479866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 123; Significance: 5e-63; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 9 - 178
Target Start/End: Original strand, 618694 - 618864
Alignment:
Q  9 gaagaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacattt-cctcggcagttaactacagtcggattttaaattcctcggcagtta 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||| |||||||||||||||||    
T  618694 gaagaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacattttcctcggcagttaactgcagccggatttcaaattcctcggcagtta 618793  T
Q  108 actgttgagggggtatttgcgtaaattactcgtatggcacagccatactatatgtggtaacatcaattctc 178  Q
    ||||  |||||| |||||||||||||||||||| ||||||||||||||||||||||| || | ||||||||    
T  618794 actgccgaggggatatttgcgtaaattactcgtgtggcacagccatactatatgtgggaagagcaattctc 618864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 12 - 122
Target Start/End: Original strand, 29593301 - 29593411
Alignment:
Q  12 gaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacatttcctcggcagttaactacagtcggattttaaattcctcggcagttaactg 111  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||| |||| || |||||||||||||||||||||    
T  29593301 gaaaatagtgtgtagggggagcaggtggctgtttcatctgatgaaacatttcctcggcagttaactgcagccggaattcaaattcctcggcagttaactg 29593400  T
Q  112 ttgagggggta 122  Q
    | |||||||||    
T  29593401 tcgagggggta 29593411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 13 - 169
Target Start/End: Complemental strand, 30786651 - 30786489
Alignment:
Q  13 aaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacattt-cctcggc----agttaactacagtcggatt-ttaaattcctcggcagtt 106  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    |||||||| | | ||| ||  ||||  |||||||||||    
T  30786651 aaaatagtgtgcagggggagcaggtagctgtttcatcggatgaaacatttccctcggcagttagttaactgccgccggtttcctaaaaacctcggcagtt 30786552  T
Q  107 aactgttgagggggtatttgcgtaaattactcgtatggcacagccatactatatgtggtaaca 169  Q
    |||||  ||| |||||||||||||||||||| || ||||||||||||||||||||||| ||||    
T  30786551 aactgccgagagggtatttgcgtaaattactggtgtggcacagccatactatatgtgggaaca 30786489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 18105503 - 18105432
Alignment:
Q  9 gaagaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaaca-tttcctcggcagttaactac 79  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  18105503 gaagaaaatagtgtgtagggggagcaggtagttgtttcatcggatgaaacattttcctcggcagttaactac 18105432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 43624093 - 43624159
Alignment:
Q  13 aaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacatttcctcggcagttaactac 79  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  43624093 aaaatagtgtgtagggggagcaggtagctgtttcatcgtatgaaacatttcctcggtagttaactac 43624159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 13 - 79
Target Start/End: Complemental strand, 43033100 - 43033033
Alignment:
Q  13 aaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacattt-cctcggcagttaactac 79  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  43033100 aaaatagtgtgtagggggagcaggtagctgtttcatcgtatgaaacatttccctcggcagttaactac 43033033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 13 - 79
Target Start/End: Complemental strand, 45763506 - 45763439
Alignment:
Q  13 aaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacattt-cctcggcagttaactac 79  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  45763506 aaaatagtgtgtagggggagcaggtagctgtttcatcgtatgaaacatttccctcggcagttaactac 45763439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 12 - 92
Target Start/End: Complemental strand, 47741864 - 47741784
Alignment:
Q  12 gaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacatttcctcggcagttaactacagtcggattttaa 92  Q
    ||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||| ||| |||| |||||    
T  47741864 gaaaatagtatgtagggggagcaggtggctgtttcatctgatgaaacatttcctcgacagttaactgcagccggaatttaa 47741784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 42499538 - 42499468
Alignment:
Q  9 gaagaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacatttcctcggcagttaactac 79  Q
    |||||||||| ||||||||||||||||||  |||||||||| |||||||||| ||||||||||||||||||    
T  42499538 gaagaaaataatgtgtagggggagcaggtgactgtttcatctgatgaaacatatcctcggcagttaactac 42499468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 96 - 178
Target Start/End: Complemental strand, 45763395 - 45763313
Alignment:
Q  96 cctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactatatgtggtaacatcaattctc 178  Q
    ||||||||||||||||  ||| |||||||||||||||||||| || ||||||||||||||||||||||| |||| ||| ||||    
T  45763395 cctcggcagttaactgccgagagggtatttgcgtaaattactggtgtggcacagccatactatatgtgggaacagcaaatctc 45763313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 96 - 169
Target Start/End: Original strand, 43624203 - 43624276
Alignment:
Q  96 cctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactatatgtggtaaca 169  Q
    ||||||||||||||||  ||| |||||||||||||||||||| || ||||||| ||||||||||||||| ||||    
T  43624203 cctcggcagttaactgccgagagggtatttgcgtaaattactggtgtggcacaaccatactatatgtgggaaca 43624276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 60 - 122
Target Start/End: Complemental strand, 42499461 - 42499399
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggta 122  Q
    |||||||||||||||||| ||||||||||| ||||||||||||| |||||||| || ||||||    
T  42499461 tttcctcggcagttaactgcagtcggatttcaaattcctcggcaattaactgtcgaaggggta 42499399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 59 - 120
Target Start/End: Original strand, 27453614 - 27453675
Alignment:
Q  59 atttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgaggggg 120  Q
    ||||||||||||||||||| ||| |||||||| ||||||||||||||||||||  |||||||    
T  27453614 atttcctcggcagttaactgcagccggatttttaattcctcggcagttaactgccgaggggg 27453675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 96 - 169
Target Start/End: Complemental strand, 43032989 - 43032916
Alignment:
Q  96 cctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactatatgtggtaaca 169  Q
    |||||||||||||||   ||| |||||||||||||||||| | || ||||||||||||||||||||||| ||||    
T  43032989 cctcggcagttaactaccgagagggtatttgcgtaaattattggtgtggcacagccatactatatgtgggaaca 43032916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 60 - 120
Target Start/End: Original strand, 9494827 - 9494887
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgaggggg 120  Q
    |||||||||||||||||| ||| ||| |||| ||||||||||||||||||||  |||||||    
T  9494827 tttcctcggcagttaactgcagccggttttttaattcctcggcagttaactgccgaggggg 9494887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 60 - 180
Target Start/End: Original strand, 12210611 - 12210730
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactata 159  Q
    |||||||||||||||||| | | || ||||  ||  | ||||||||||||||  ||||||  ||||| |||| |||||||||||||||||||| || | |    
T  12210611 tttcctcggcagttaactgcggccgtatttctaaaacttcggcagttaactgccgaggggc-atttgagtaatttactcgtatggcacagccaaaccaaa 12210709  T
Q  160 tgtggtaacatcaattctctt 180  Q
    ||||| |||| ||||||||||    
T  12210710 tgtgggaacagcaattctctt 12210730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 17465792 - 17465852
Alignment:
Q  118 gggtatttgcgtaaattactcgtatggcacagccatactatatgtggtaacatcaattctc 178  Q
    |||||||| ||||  ||||| || ||||||||||||||||||||||| |||||||||||||    
T  17465792 gggtattttcgtattttactggtgtggcacagccatactatatgtgggaacatcaattctc 17465852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 17587422 - 17587362
Alignment:
Q  118 gggtatttgcgtaaattactcgtatggcacagccatactatatgtggtaacatcaattctc 178  Q
    |||||||| ||||  ||||| || ||||||||||||||||||||||| |||||||||||||    
T  17587422 gggtattttcgtattttactggtgtggcacagccatactatatgtgggaacatcaattctc 17587362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 12 - 79
Target Start/End: Complemental strand, 47061053 - 47060985
Alignment:
Q  12 gaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacat-ttcctcggcagttaactac 79  Q
    |||||||||||||||| |||  |||| ||||||||||| |||||||||| || ||||||||||||||||    
T  47061053 gaaaatagtgtgtaggaggaagaggtggctgtttcatctgatgaaacatatttctcggcagttaactac 47060985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 60 - 120
Target Start/End: Complemental strand, 47776384 - 47776324
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgaggggg 120  Q
    |||||||||||||||||| ||| | |||||| |||| |||||||||||||||| |||||||    
T  47776384 tttcctcggcagttaactgcagccagatttttaatttctcggcagttaactgtcgaggggg 47776324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 183
Target Start/End: Original strand, 20566453 - 20566503
Alignment:
Q  133 ttactcgtatggcacagccatactatatgtggtaacatcaattctcttgaa 183  Q
    |||||||| ||||||||||| ||||||||||| |||| |||||||||||||    
T  20566453 ttactcgtgtggcacagccaaactatatgtgggaacaacaattctcttgaa 20566503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 112
Target Start/End: Original strand, 21188423 - 21188473
Alignment:
Q  62 tcctcggcagttaactacagtcggattttaaattcctcggcagttaactgt 112  Q
    |||||||||||||||| ||| ||| |||| |||||||||||||||||||||    
T  21188423 tcctcggcagttaactgcagccggtttttgaattcctcggcagttaactgt 21188473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 15074322 - 15074367
Alignment:
Q  133 ttactcgtatggcacagccatactatatgtggtaacatcaattctc 178  Q
    |||||||| ||||||||||||||||||||||| |||| ||||||||    
T  15074322 ttactcgtgtggcacagccatactatatgtgggaacaacaattctc 15074367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 20564052 - 20564007
Alignment:
Q  133 ttactcgtatggcacagccatactatatgtggtaacatcaattctc 178  Q
    |||||||||||||||| ||||||||||||||| |||| ||||||||    
T  20564052 ttactcgtatggcacaaccatactatatgtgggaacagcaattctc 20564007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 42508121 - 42508166
Alignment:
Q  133 ttactcgtatggcacagccatactatatgtggtaacatcaattctc 178  Q
    |||||||| ||||||||||||||||||||||| |||| ||||||||    
T  42508121 ttactcgtgtggcacagccatactatatgtgggaacaacaattctc 42508166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 178
Target Start/End: Original strand, 10098200 - 10098256
Alignment:
Q  122 atttgcgtaaattactcgtatggcacagccatactatatgtggtaacatcaattctc 178  Q
    |||| ||||| |||||||| |||||||||||||| |||||||| |||| ||||||||    
T  10098200 atttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 10098256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 120
Target Start/End: Complemental strand, 47060978 - 47060919
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgaggggg 120  Q
    |||||||||||||||||||||| | |||||| ||||||||| ||||||||||  |||||||    
T  47060978 tttcctcggcagttaactacag-ccgattttgaattcctcgacagttaactgccgaggggg 47060919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 60 - 111
Target Start/End: Complemental strand, 29592595 - 29592544
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactg 111  Q
    |||| ||||||||||| | ||||||||||| |||||||||| ||||||||||    
T  29592595 tttcatcggcagttaattgcagtcggatttcaaattcctcgacagttaactg 29592544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 64 - 111
Target Start/End: Complemental strand, 45361697 - 45361650
Alignment:
Q  64 ctcggcagttaactacagtcggattttaaattcctcggcagttaactg 111  Q
    |||||||||||||| ||| |||||||| ||||||||| ||||||||||    
T  45361697 ctcggcagttaactgcagccggatttttaattcctcgtcagttaactg 45361650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 60 - 178
Target Start/End: Complemental strand, 7121 - 7004
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactata 159  Q
    |||||||||||||||||| ||| || ||||  ||  | |||| |||||||||  ||||||  ||||| |||| |||||||| ||||||||||| || | |    
T  7121 tttcctcggcagttaactgcagccgtatttctaaaacttcggtagttaactgccgaggggc-atttgagtaatttactcgtgtggcacagccaaacaaca 7023  T
Q  160 tgtggtaacatcaattctc 178  Q
    ||||| |||| ||||||||    
T  7022 tgtgggaacagcaattctc 7004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 133 - 187
Target Start/End: Complemental strand, 18105352 - 18105298
Alignment:
Q  133 ttactcgtatggcacagccatactatatgtggtaacatcaattctcttgaaaatg 187  Q
    |||||||| ||| || |||||||||||||||| |||| |||||||||||| ||||    
T  18105352 ttactcgtgtggtacggccatactatatgtgggaacaacaattctcttgacaatg 18105298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 10098312 - 10098267
Alignment:
Q  133 ttactcgtatggcacagccatactatatgtggtaacatcaattctc 178  Q
    |||||||| ||||||||||| ||||||||||| |||| ||||||||    
T  10098312 ttactcgtgtggcacagccaaactatatgtgggaacaacaattctc 10098267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 104
Target Start/End: Complemental strand, 11629780 - 11629739
Alignment:
Q  63 cctcggcagttaactacagtcggattttaaattcctcggcag 104  Q
    ||||||||||||||| ||| |||||||| |||||||||||||    
T  11629780 cctcggcagttaactgcagccggatttttaattcctcggcag 11629739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 112
Target Start/End: Complemental strand, 34622552 - 34622499
Alignment:
Q  59 atttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgt 112  Q
    ||||||||| ||||||||| ||||||| || | |||||||| ||||||||||||    
T  34622552 atttcctcgacagttaactgcagtcggtttcttaattcctctgcagttaactgt 34622499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 35610509 - 35610554
Alignment:
Q  133 ttactcgtatggcacagccatactatatgtggtaacatcaattctc 178  Q
    ||||| || ||||||||||||||||||||||| |||| ||||||||    
T  35610509 ttactggtgtggcacagccatactatatgtgggaacagcaattctc 35610554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 41880493 - 41880448
Alignment:
Q  133 ttactcgtatggcacagccatactatatgtggtaacatcaattctc 178  Q
    |||||||| ||||||| ||||||||||||||| |||| ||||||||    
T  41880493 ttactcgtgtggcacaaccatactatatgtgggaacaacaattctc 41880448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 10168352 - 10168404
Alignment:
Q  133 ttactcgtatggcacagccatactatatgtggtaacatcaattctcttgaaaa 185  Q
    |||||||| | ||||| ||||||||||||||| |||| |||||||| ||||||    
T  10168352 ttactcgtgtagcacatccatactatatgtgggaacaacaattctcatgaaaa 10168404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 10175877 - 10175929
Alignment:
Q  133 ttactcgtatggcacagccatactatatgtggtaacatcaattctcttgaaaa 185  Q
    |||||||| | ||||| ||||||||||||||| |||| |||||||| ||||||    
T  10175877 ttactcgtgtagcacatccatactatatgtgggaacaacaattctcatgaaaa 10175929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 103
Target Start/End: Complemental strand, 39460606 - 39460562
Alignment:
Q  59 atttcctcggcagttaactacagtcggattttaaattcctcggca 103  Q
    |||||||| |||||||||| ||| |||||||| ||||||||||||    
T  39460606 atttcctcagcagttaactgcagccggatttttaattcctcggca 39460562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 40141309 - 40141361
Alignment:
Q  122 atttgcgtaaattactcgtatggcacagccatactatatgtggtaacatcaat 174  Q
    ||||| |||| |||||||| ||||||||||| ||||||||||| |||| ||||    
T  40141309 atttgagtaatttactcgtgtggcacagccaaactatatgtgggaacaacaat 40141361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 94 - 178
Target Start/End: Original strand, 42795135 - 42795218
Alignment:
Q  94 ttcctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactatatgtggtaacatcaattctc 178  Q
    ||||||||||||||||||  |||||  |||||| |||| |||||||| ||||||||||| || | | |||| |||| ||||||||    
T  42795135 ttcctcggcagttaactgccgaggga-tatttgagtaatttactcgtgtggcacagccaaaccaaaagtgggaacaacaattctc 42795218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 116; Significance: 7e-59; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 9 - 179
Target Start/End: Complemental strand, 18347145 - 18346974
Alignment:
Q  9 gaagaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacattt-cctcggcagttaactacagtcggattttaaattcctcggcagtta 107  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||| ||||||| | |||||||||||||||    
T  18347145 gaagaaaatagtgtgtagggggagcaggtagctgtttcattggatgaaacattttcctcggcagttaactgcagccggatttcagattcctcggcagtta 18347046  T
Q  108 actgttgagggggtatttgcgtaaattactcgtatggcacagccatactatatgtggtaacatcaattctct 179  Q
    ||||  ||||||||||||||||||||||||| | ||||||| ||||||||||||||| |||| |||||||||    
T  18347045 actgccgagggggtatttgcgtaaattactcatgtggcacaaccatactatatgtgggaacaacaattctct 18346974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 13388651 - 13388722
Alignment:
Q  9 gaagaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaaca-tttcctcggcagttaactac 79  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  13388651 gaagaaaatagtgtgtagggggagcaggtagttgtttcatcggatgaaacattttcctcggcagttaactac 13388722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 1612694 - 1612761
Alignment:
Q  13 aaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacattt-cctcggcagttaactac 79  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  1612694 aaaatagtgtgtagggggagcaggtagctgtttcatcgtatgaaacatttccctcggcagttaactac 1612761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 28250015 - 28249944
Alignment:
Q  9 gaagaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaaca-tttcctcggcagttaactac 79  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||    
T  28250015 gaagaaaatagtgtgtagggggagcaggtagctgtttcatcaaatgaaacattttcctcggcagttaactac 28249944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 14 - 79
Target Start/End: Complemental strand, 31146498 - 31146432
Alignment:
Q  14 aaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacat-ttcctcggcagttaactac 79  Q
    |||||||||||||||||||||| | ||||||||||| |||||||||| |||||||||||||||||||    
T  31146498 aaatagtgtgtagggggagcagatggctgtttcatcagatgaaacatattcctcggcagttaactac 31146432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 96 - 169
Target Start/End: Original strand, 1612805 - 1612878
Alignment:
Q  96 cctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactatatgtggtaaca 169  Q
    |||| |||||||||||  ||| |||||||||||||||||||| || ||||||||||||||||||||||| ||||    
T  1612805 cctcagcagttaactgccgagagggtatttgcgtaaattactggtgtggcacagccatactatatgtgggaaca 1612878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 60 - 111
Target Start/End: Original strand, 28362752 - 28362803
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactg 111  Q
    |||||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  28362752 tttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactg 28362803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 14 - 111
Target Start/End: Original strand, 23985955 - 23986053
Alignment:
Q  14 aaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacat-ttcctcggcagttaactacagtcggattttaaattcctcggcagttaactg 111  Q
    |||| |||||||||||||||||||  |||||||||| |||||||||| || |  ||||||||||| ||  ||| |||| |||| |||||||||||||||    
T  23985955 aaatggtgtgtagggggagcaggtgactgtttcatctgatgaaacatatttcatggcagttaactgcaaccggtttttgaatttctcggcagttaactg 23986053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 60 - 125
Target Start/End: Complemental strand, 31146425 - 31146360
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggtattt 125  Q
    |||||||| ||||||||| ||| ||||||| ||||||||||||||||||||| | |||||| ||||    
T  31146425 tttcctcgacagttaactgcagccggatttcaaattcctcggcagttaactgctaagggggcattt 31146360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 60 - 120
Target Start/End: Complemental strand, 31768805 - 31768745
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgaggggg 120  Q
    ||||||||||| |||||| ||| |||||||| ||||||||||||||||||||  |||||||    
T  31768805 tttcctcggcaattaactgcagccggatttttaattcctcggcagttaactgccgaggggg 31768745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 12 - 49
Target Start/End: Original strand, 2052573 - 2052610
Alignment:
Q  12 gaaaatagtgtgtagggggagcaggtagctgtttcatc 49  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  2052573 gaaaatagtatgtagggggagcaggtagctgtttcatc 2052610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 27616694 - 27616649
Alignment:
Q  133 ttactcgtatggcacagccatactatatgtggtaacatcaattctc 178  Q
    |||||||| ||||||||||||||||||||||| |||| ||||||||    
T  27616694 ttactcgtgtggcacagccatactatatgtgggaacagcaattctc 27616649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 75
Target Start/End: Original strand, 7363263 - 7363327
Alignment:
Q  12 gaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacat-ttcctcggcagttaa 75  Q
    ||||||||| |||||||||||||| |  |||||||||| |||||||||| ||||||| |||||||    
T  7363263 gaaaatagtatgtagggggagcagatgactgtttcatctgatgaaacatattcctcgacagttaa 7363327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 75
Target Start/End: Complemental strand, 18606171 - 18606107
Alignment:
Q  12 gaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacat-ttcctcggcagttaa 75  Q
    ||||||||||||||||||||||||||  |||||||||| ||| ||| || || ||||||||||||    
T  18606171 gaaaatagtgtgtagggggagcaggtgactgtttcatctgataaaatatatttctcggcagttaa 18606107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 60 - 111
Target Start/End: Original strand, 8193230 - 8193281
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactg 111  Q
    |||||||||||||||||| ||| ||  |||| ||||||||||||||||||||    
T  8193230 tttcctcggcagttaactgcagccgtgtttttaattcctcggcagttaactg 8193281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 11688093 - 11688046
Alignment:
Q  133 ttactcgtatggcacagccatactatatgtggtaacatcaattctctt 180  Q
    |||||||| ||||||||||||||| ||||||| |||| ||||||||||    
T  11688093 ttactcgtgtggcacagccatactgtatgtgggaacaacaattctctt 11688046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 14 - 49
Target Start/End: Complemental strand, 13479828 - 13479793
Alignment:
Q  14 aaatagtgtgtagggggagcaggtagctgtttcatc 49  Q
    |||||||||||||||||||||||| |||||||||||    
T  13479828 aaatagtgtgtagggggagcaggtggctgtttcatc 13479793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 60 - 111
Target Start/End: Original strand, 32643542 - 32643593
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactg 111  Q
    |||||||| ||||||||| ||| |||||||| ||||||| ||||||||||||    
T  32643542 tttcctcgacagttaactgcagccggatttttaattccttggcagttaactg 32643593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 60 - 178
Target Start/End: Complemental strand, 2109569 - 2109452
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactata 159  Q
    |||||||||||||||||| ||| || ||||  ||  | ||||||||||||||  ||| || |||||| |||| |||||||| ||||||||||| || | |    
T  2109569 tttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgagagg-tatttgagtaatttactcgtgtggcacagccaaacaaaa 2109471  T
Q  160 tgtggtaacatcaattctc 178  Q
     |||| |||| ||||||||    
T  2109470 agtgggaacaacaattctc 2109452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 60 - 178
Target Start/End: Complemental strand, 25554757 - 25554640
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactata 159  Q
    |||||| ||||||||||| ||| || ||||  ||  | ||||||||||||||  |||||| |||||| |||| |||||||| ||||||||||| | || |    
T  25554757 tttcctaggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgagggg-tatttgagtaatttactcgtgtggcacagccaaagtaaa 25554659  T
Q  160 tgtggtaacatcaattctc 178  Q
     |||| |||| ||||||||    
T  25554658 agtgggaacaacaattctc 25554640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 108
Target Start/End: Complemental strand, 7361244 - 7361195
Alignment:
Q  59 atttcctcggcagttaactacagtcggattttaaattcctcggcagttaa 108  Q
    ||||||||||||||||||| ||| ||| ||||||| ||||| ||||||||    
T  7361244 atttcctcggcagttaactgcagccggtttttaaaatcctcagcagttaa 7361195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 11694154 - 11694199
Alignment:
Q  133 ttactcgtatggcacagccatactatatgtggtaacatcaattctc 178  Q
    |||||||| ||||||||||| ||||||||||| |||| ||||||||    
T  11694154 ttactcgtgtggcacagccaaactatatgtgggaacagcaattctc 11694199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 98 - 178
Target Start/End: Complemental strand, 32691164 - 32691085
Alignment:
Q  98 tcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactatatgtggtaacatcaattctc 178  Q
    ||||||||||||||| || |||| |||||||||| ||||| || ||||||| ||| || | |||||| |||| ||||||||    
T  32691164 tcggcagttaactgtcga-ggggcatttgcgtaatttacttgtgtggcacaaccaaaccaaatgtgggaacaacaattctc 32691085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 111; Significance: 7e-56; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 300 - 410
Target Start/End: Complemental strand, 354920 - 354810
Alignment:
Q  300 agcattcgatttatgctctttctctcgcatcacttcccgatcgcttcctccgatgactctcgtttcctcgccaactatggcaaccttttcatccacagct 399  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  354920 agcattcgatttatgctctttctctcgcatcacttcccgatcgcttcctccgatgactctcgtttcctcgccaactatggcaaccttttcatccacagct 354821  T
Q  400 tccaatcagat 410  Q
    |||||||||||    
T  354820 tccaatcagat 354810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 13 - 169
Target Start/End: Original strand, 30305516 - 30305674
Alignment:
Q  13 aaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacattt-cctcggcagttaactacagtcggattt-taaattcctcggcagttaact 110  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||| |||||||| | | ||| ||  ||||  |||||||||||||||    
T  30305516 aaaatagtgtgtagggggagcaggtagttgtttcatcagatgaaacattttcctcggtagttaactgccgccggtttcctaaaaacctcggcagttaact 30305615  T
Q  111 gttgagggggtatttgcgtaaattactcgtatggcacagccatactatatgtggtaaca 169  Q
    |  ||| |||||||||||||||||||| || ||||||||||||||||||||||| ||||    
T  30305616 gccgagagggtatttgcgtaaattactggtgtggcacagccatactatatgtgggaaca 30305674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 9 - 122
Target Start/End: Complemental strand, 31957937 - 31957824
Alignment:
Q  9 gaagaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacatttcctcggcagttaactacagtcggattttaaattcctcggcagttaa 108  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||| ||| |||| || ||||||||||| |||||     
T  31957937 gaagaaaatagtgtgtagggggagcaggtggctgtttcatctgatgaaacatttcctcggtagttaactgcagccggaattcaaattcctcggtagttag 31957838  T
Q  109 ctgttgagggggta 122  Q
    |||| |||||||||    
T  31957837 ctgtcgagggggta 31957824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 12 - 111
Target Start/End: Complemental strand, 45454507 - 45454407
Alignment:
Q  12 gaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacat-ttcctcggcagttaactacagtcggattttaaattcctcggcagttaact 110  Q
    ||||||||| |||||||||||||||| | ||||||||| |||||||||| ||||||||||||||||| ||  ||||||| ||||||||||||||||||||    
T  45454507 gaaaatagtatgtagggggagcaggtggttgtttcatctgatgaaacatattcctcggcagttaactgcatccggatttcaaattcctcggcagttaact 45454408  T
Q  111 g 111  Q
    |    
T  45454407 g 45454407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 13 - 79
Target Start/End: Complemental strand, 7340193 - 7340126
Alignment:
Q  13 aaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaaca-tttcctcggcagttaactac 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  7340193 aaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacattttcctcggcagttaactac 7340126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 32378868 - 32378935
Alignment:
Q  13 aaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacattt-cctcggcagttaactac 79  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  32378868 aaaatagtgtgtagggggagcaggtagctgtttcatcgtatgaaacatttccctcggcagttaactac 32378935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 32432823 - 32432890
Alignment:
Q  13 aaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacattt-cctcggcagttaactac 79  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  32432823 aaaatagtgtgtagggggagcaggtagctgtttcatcgtatgaaacatttccctcggcagttaactac 32432890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 12 - 107
Target Start/End: Original strand, 41744667 - 41744762
Alignment:
Q  12 gaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacatttcctcggcagttaactacagtcggattttaaattcctcggcagtta 107  Q
    ||||||||||||||||||||||| || ||||||||||| |||||||||||||||| |||||||||  ||| || | || |||||||||| ||||||    
T  41744667 gaaaatagtgtgtagggggagcatgtggctgtttcatctgatgaaacatttcctcagcagttaacggcagccgaaattcaaattcctcgacagtta 41744762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 1114871 - 1114802
Alignment:
Q  9 gaagaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacatttcctcggcagttaactac 79  Q
    ||||||||||||||||||||| ||||||| ||||||||||| ||||||||||| |||||||||||||||||    
T  1114871 gaagaaaatagtgtgtagggg-agcaggtggctgtttcatctgatgaaacattccctcggcagttaactac 1114802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 96 - 169
Target Start/End: Complemental strand, 7340082 - 7340009
Alignment:
Q  96 cctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactatatgtggtaaca 169  Q
    ||||||||||||||||  ||| |||||||||||||||||||| || ||||||||||||||||||||||| ||||    
T  7340082 cctcggcagttaactgccgagagggtatttgcgtaaattactggtgtggcacagccatactatatgtggaaaca 7340009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 96 - 173
Target Start/End: Original strand, 8423847 - 8423924
Alignment:
Q  96 cctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactatatgtggtaacatcaa 173  Q
    ||||||||||||||||  ||| |||||||||||||||||| | || ||||||||||||||||||||||| ||||||||    
T  8423847 cctcggcagttaactgccgagagggtatttgcgtaaattaatggtgtggcacagccatactatatgtgggaacatcaa 8423924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 96 - 169
Target Start/End: Original strand, 32378979 - 32379052
Alignment:
Q  96 cctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactatatgtggtaaca 169  Q
    ||||||||||||||||  ||| |||||||||||||||||||| || ||||||||||||||||||||||| ||||    
T  32378979 cctcggcagttaactgccgagagggtatttgcgtaaattactggtgtggcacagccatactatatgtgggaaca 32379052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 96 - 169
Target Start/End: Original strand, 32432934 - 32433007
Alignment:
Q  96 cctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactatatgtggtaaca 169  Q
    ||||||||||||||||  ||| |||||||||||||||||||| || ||||||||||||||||||||||| ||||    
T  32432934 cctcggcagttaactgccgagagggtatttgcgtaaattactggtgtggcacagccatactatatgtgggaaca 32433007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 12 - 79
Target Start/End: Original strand, 35966696 - 35966763
Alignment:
Q  12 gaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacatttcctcggcagttaactac 79  Q
    ||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||  |||||||||||    
T  35966696 gaaaatagtatgtagggggagcaggtggctgtttcatctgatgaaacatttcctctacagttaactac 35966763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 79
Target Start/End: Complemental strand, 18205911 - 18205845
Alignment:
Q  14 aaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacat-ttcctcggcagttaactac 79  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||  | ||||||||||||||||    
T  18205911 aaatagtgtgtagggggagcaggtggctgtttcatctgatgaaacataattctcggcagttaactac 18205845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 59 - 179
Target Start/End: Complemental strand, 1114796 - 1114676
Alignment:
Q  59 atttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactat 158  Q
    ||||||||||||||||||| ||| ||||||| ||||| |||||||||||||||  |||||||||    ||||  ||||| || |||||||||| ||  |     
T  1114796 atttcctcggcagttaactgcagccggatttcaaatttctcggcagttaactgccgagggggtaaaatcgtattttactggtgtggcacagccttatcac 1114697  T
Q  159 atgtggtaacatcaattctct 179  Q
    |||||| |||| |||||||||    
T  1114696 atgtgggaacaacaattctct 1114676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 12 - 79
Target Start/End: Original strand, 2146903 - 2146971
Alignment:
Q  12 gaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacat-ttcctcggcagttaactac 79  Q
    ||||||||| |||||||||||||||| |||||||||||  ||||||||| ||| |||||||||||||||    
T  2146903 gaaaatagtatgtagggggagcaggtggctgtttcatctaatgaaacatattcatcggcagttaactac 2146971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 12 - 111
Target Start/End: Original strand, 39752970 - 39753069
Alignment:
Q  12 gaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacat-ttcctcggcagttaactacagtcggattttaaattcctcggcagttaact 110  Q
    ||||||||| ||||||||||  |||||  ||||||||| |||||||||| |||||||| | |||||| ||| ||| ||| ||||||||||||||||||||    
T  39752970 gaaaatagtatgtagggggaataggtatatgtttcatctgatgaaacatattcctcggtatttaactgcagccgg-tttcaaattcctcggcagttaact 39753068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 60 - 187
Target Start/End: Original strand, 5533046 - 5533172
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactata 159  Q
    |||||||||||||||||| ||| || ||||  ||  | |||||||||||||| ||||||| |||||| |||| |||||||| ||||||||||| |  | |    
T  5533046 tttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgctgagggg-tatttgagtaatttactcgtgtggcacagccaaatcaaa 5533144  T
Q  160 tgtggtaacatcaattctcttgaaaatg 187  Q
     |||| |||| |||||||||| ||||||    
T  5533145 agtgggaacaacaattctcttaaaaatg 5533172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 14 - 79
Target Start/End: Complemental strand, 22577790 - 22577724
Alignment:
Q  14 aaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacat-ttcctcggcagttaactac 79  Q
    ||||||||||| |||||||||||| ||||||||||| ||||||||||  | ||||||||||||||||    
T  22577790 aaatagtgtgtggggggagcaggtggctgtttcatctgatgaaacatacttctcggcagttaactac 22577724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 60 - 120
Target Start/End: Complemental strand, 41743942 - 41743882
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgaggggg 120  Q
    |||| ||||||||||||| ||| ||||||| |||||||||||||||||||| | |||||||    
T  41743942 tttcttcggcagttaactgcagccggatttcaaattcctcggcagttaactatcgaggggg 41743882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 63 - 122
Target Start/End: Original strand, 5304168 - 5304227
Alignment:
Q  63 cctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggta 122  Q
    |||||||||||||| |||||| |||||| ||||||| ||||||||||||  |||||||||    
T  5304168 cctcggcagttaacaacagtcagatttttaattccttggcagttaactgccgagggggta 5304227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 60 - 111
Target Start/End: Original strand, 38872951 - 38873002
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactg 111  Q
    |||||||||||||||||| ||| ||| ||||||||||||||| |||||||||    
T  38872951 tttcctcggcagttaactgcagccggtttttaaattcctcggtagttaactg 38873002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 179
Target Start/End: Original strand, 25628 - 25674
Alignment:
Q  133 ttactcgtatggcacagccatactatatgtggtaacatcaattctct 179  Q
    |||||||| ||||||||||||||||||||||| |||| |||||||||    
T  25628 ttactcgtgtggcacagccatactatatgtgggaacaacaattctct 25674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 120
Target Start/End: Complemental strand, 3395942 - 3395884
Alignment:
Q  62 tcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgaggggg 120  Q
    |||||||||||||||| || ||   ||||||||||||||||||||||||| ||||||||    
T  3395942 tcctcggcagttaactgcaatcaatttttaaattcctcggcagttaactgctgaggggg 3395884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 79
Target Start/End: Complemental strand, 4866559 - 4866493
Alignment:
Q  14 aaatagtgtgtagggggagcaggtagctgtttcatcggatgaaaca-tttcctcggcagttaactac 79  Q
    ||||| |||||||||||| ||||| ||||||||||| ||||||||| ||| |||| |||||||||||    
T  4866559 aaatattgtgtagggggaacaggtggctgtttcatctgatgaaacatttttctcgacagttaactac 4866493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 120
Target Start/End: Complemental strand, 43188127 - 43188065
Alignment:
Q  59 atttcctcggcagttaacta-cagtcggattttaaattcctcggcagttaactgttgaggggg 120  Q
    |||||||||||||||||||| ||| |||||||| ||||||||| || |||||||| |||||||    
T  43188127 atttcctcggcagttaactaccagccggatttttaattcctcgacaattaactgtcgaggggg 43188065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 489720 - 489765
Alignment:
Q  133 ttactcgtatggcacagccatactatatgtggtaacatcaattctc 178  Q
    |||||||| ||||||||||||||||||||||| |||| ||||||||    
T  489720 ttactcgtgtggcacagccatactatatgtgggaacagcaattctc 489765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 59 - 120
Target Start/End: Original strand, 35966769 - 35966830
Alignment:
Q  59 atttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgaggggg 120  Q
    ||||| ||| || |||||| ||||||||||| |||||||||||||||||||||  |||||||    
T  35966769 atttcttcgacaattaactgcagtcggatttcaaattcctcggcagttaactgccgaggggg 35966830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 60 - 125
Target Start/End: Original strand, 38135630 - 38135695
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggtattt 125  Q
    ||||||||| |||||||| ||| ||| || ||||||||||||||||||||||  |||||| |||||    
T  38135630 tttcctcggtagttaactgcagccggtttataaattcctcggcagttaactgcagaggggatattt 38135695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 42485632 - 42485677
Alignment:
Q  133 ttactcgtatggcacagccatactatatgtggtaacatcaattctc 178  Q
    |||||||| ||||||||||||||||||||||| |||| ||||||||    
T  42485632 ttactcgtgtggcacagccatactatatgtgggaacagcaattctc 42485677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 178
Target Start/End: Original strand, 184635 - 184691
Alignment:
Q  122 atttgcgtaaattactcgtatggcacagccatactatatgtggtaacatcaattctc 178  Q
    |||| ||||| |||||||| |||||||||||||| |||||||| |||| ||||||||    
T  184635 atttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 184691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 120
Target Start/End: Original strand, 20549253 - 20549313
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgaggggg 120  Q
    ||||||||| |||||||| ||| || |||| |||||||||||||||||||||  |||||||    
T  20549253 tttcctcggtagttaactgcagccgaatttcaaattcctcggcagttaactgccgaggggg 20549313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 178
Target Start/End: Original strand, 36678012 - 36678068
Alignment:
Q  122 atttgcgtaaattactcgtatggcacagccatactatatgtggtaacatcaattctc 178  Q
    |||| ||||| |||||||| |||||||||||||| |||||||| |||| ||||||||    
T  36678012 atttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 36678068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 120
Target Start/End: Original strand, 40077271 - 40077331
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgaggggg 120  Q
    |||||||||||||||||| |||||||||||| ||| ||| | ||||| || ||||||||||    
T  40077271 tttcctcggcagttaactgcagtcggatttttaataccttgacagtttaccgttgaggggg 40077331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 64 - 111
Target Start/End: Original strand, 1116213 - 1116260
Alignment:
Q  64 ctcggcagttaactacagtcggattttaaattcctcggcagttaactg 111  Q
    |||||||||||||| ||| ||||||| |||||||||| ||||||||||    
T  1116213 ctcggcagttaactgcagccggatttcaaattcctcgacagttaactg 1116260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 2416182 - 2416135
Alignment:
Q  133 ttactcgtatggcacagccatactatatgtggtaacatcaattctctt 180  Q
    ||||| || ||||||||||||||||||||||| |||| ||||||||||    
T  2416182 ttacttgtgtggcacagccatactatatgtgggaacaacaattctctt 2416135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 122 - 177
Target Start/End: Original strand, 15036785 - 15036840
Alignment:
Q  122 atttgcgtaaattactcgtatggcacagccatactatatgtggtaacatcaattct 177  Q
    |||||||||| |||||||| ||||||||||| ||||| ||||| |||| |||||||    
T  15036785 atttgcgtaatttactcgtgtggcacagccaaactatgtgtgggaacaacaattct 15036840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 60 - 111
Target Start/End: Original strand, 28646268 - 28646319
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactg 111  Q
    |||||||||||||||||| ||| ||  ||||||||||||||||| |||||||    
T  28646268 tttcctcggcagttaactgcagccgatttttaaattcctcggcaattaactg 28646319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 60 - 111
Target Start/End: Original strand, 28650852 - 28650903
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactg 111  Q
    |||||||||||||||||| ||| ||  ||||||||||||||||| |||||||    
T  28650852 tttcctcggcagttaactgcagccgatttttaaattcctcggcaattaactg 28650903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 60 - 111
Target Start/End: Complemental strand, 35962359 - 35962308
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactg 111  Q
    ||||||||||||||||||  || ||||||| |||||||||| ||||||||||    
T  35962359 tttcctcggcagttaactgtagccggatttcaaattcctcgacagttaactg 35962308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 60 - 178
Target Start/End: Original strand, 2335169 - 2335286
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactata 159  Q
    |||||||||||||||||| ||| || ||||  ||  | |||| |||||||||  ||||||  ||||| |||| |||||||| ||||||||||| || | |    
T  2335169 tttcctcggcagttaactgcagccgtatttctaaaacttcggtagttaactgccgaggggc-atttgagtaatttactcgtgtggcacagccaaacaaca 2335267  T
Q  160 tgtggtaacatcaattctc 178  Q
    ||||| |||| ||||||||    
T  2335268 tgtgggaacaacaattctc 2335286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 60 - 110
Target Start/End: Complemental strand, 26451532 - 26451482
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaact 110  Q
    |||||||||||||||||||||| || ||||  |||||||| ||||||||||    
T  26451532 tttcctcggcagttaactacagccgaatttctaattcctcagcagttaact 26451482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 60 - 178
Target Start/End: Complemental strand, 28617620 - 28617503
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactata 159  Q
    |||||||||||||||||| ||| || ||||  ||  | ||||||||||||||  || ||| |||||| |||| |||||||| ||||||||||| || | |    
T  28617620 tttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaaggg-tatttgagtaatttactcgtgtggcacagccaaaccaaa 28617522  T
Q  160 tgtggtaacatcaattctc 178  Q
     |||| |||| ||||||||    
T  28617521 agtgggaacagcaattctc 28617503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 60 - 178
Target Start/End: Original strand, 38604269 - 38604386
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactata 159  Q
    |||||||||||||||||| ||| || ||||  ||  | ||||||||||||||| || |||||||||| |||| ||||| |  ||||||||||| || | |    
T  38604269 tttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgtcga-ggggtatttgagtaatttacttgggtggcacagccaaaccaaa 38604367  T
Q  160 tgtggtaacatcaattctc 178  Q
     |||| |||| ||||||||    
T  38604368 agtgggaacaacaattctc 38604386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 125
Target Start/End: Complemental strand, 21406319 - 21406254
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggtattt 125  Q
    ||||||||| |||||||| ||| ||| || | ||||||||||||||||||||  |||||| |||||    
T  21406319 tttcctcggtagttaactgcagccggtttatgaattcctcggcagttaactgcagaggggatattt 21406254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 125
Target Start/End: Complemental strand, 21800811 - 21800746
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggtattt 125  Q
    ||||||||| |||||||| ||| ||| || | ||||||||||||||||||||  |||||| |||||    
T  21800811 tttcctcggtagttaactgcagccggtttatgaattcctcggcagttaactgcagaggggatattt 21800746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 60 - 100
Target Start/End: Complemental strand, 39535 - 39495
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcg 100  Q
    |||||||||||||||||| ||| ||||||| ||||||||||    
T  39535 tttcctcggcagttaactgcagccggatttcaaattcctcg 39495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 94 - 178
Target Start/End: Original strand, 915690 - 915773
Alignment:
Q  94 ttcctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactatatgtggtaacatcaattctc 178  Q
    ||||||| ||||||||||| || ||| |||||| |||| |||||||| ||||||||||| || | | |||| |||| ||||||||    
T  915690 ttcctcgacagttaactgtcgaaggg-tatttgagtaatttactcgtgtggcacagccaaaccaaaagtgggaacaacaattctc 915773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 60 - 120
Target Start/End: Complemental strand, 7168140 - 7168080
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgaggggg 120  Q
    |||||||||||||||||| ||| ||| |||| ||||| ||||||| |||| || |||||||    
T  7168140 tttcctcggcagttaactgcagccggtttttgaattcttcggcagctaacagtcgaggggg 7168080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 120
Target Start/End: Original strand, 7172612 - 7172668
Alignment:
Q  64 ctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgaggggg 120  Q
    |||||||||||| | ||| ||| ||| ||||| ||||||||||||||||||| ||||    
T  7172612 ctcggcagttaattgcagccggttttaaaatttctcggcagttaactgttgatgggg 7172668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 120
Target Start/End: Original strand, 18441466 - 18441522
Alignment:
Q  64 ctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgaggggg 120  Q
    ||||||||||||||||| |||| | || |||| |||||||||||||||  |||||||    
T  18441466 ctcggcagttaactacaatcggttattgaatttctcggcagttaactgccgaggggg 18441522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 23022390 - 23022426
Alignment:
Q  142 tggcacagccatactatatgtggtaacatcaattctc 178  Q
    ||||||||||||||||||||||| |||| ||||||||    
T  23022390 tggcacagccatactatatgtgggaacaacaattctc 23022426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 94 - 178
Target Start/End: Original strand, 31185500 - 31185583
Alignment:
Q  94 ttcctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactatatgtggtaacatcaattctc 178  Q
    |||||||||| |||||||  |||||| |||||| |||| |||||||| ||||||||||| || | | |||| |||| ||||||||    
T  31185500 ttcctcggcaattaactgccgagggg-tatttgagtaatttactcgtgtggcacagccaaaccaaaagtgggaacaacaattctc 31185583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 60 - 112
Target Start/End: Complemental strand, 35389560 - 35389508
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgt 112  Q
    |||||||||||||||||| |||  || |||| |||| ||||||||||||||||    
T  35389560 tttcctcggcagttaactgcagctggtttttgaatttctcggcagttaactgt 35389508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 60
Target Start/End: Complemental strand, 35389635 - 35389587
Alignment:
Q  12 gaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacat 60  Q
    ||||||||| |||||||||||||| | | ||||||||| ||||||||||    
T  35389635 gaaaatagtatgtagggggagcagatggttgtttcatctgatgaaacat 35389587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 110; Significance: 3e-55; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 13 - 169
Target Start/End: Complemental strand, 11880 - 11723
Alignment:
Q  13 aaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacattt-cctcggcagttaactacagtcggattttaaattcctcggcagttaactg 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||| ||||||||||| |||||||||    
T  11880 aaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacattttcctcggcagttaactgcagccggatttcaaattcctcggtagttaactg 11781  T
Q  112 ttgagggggtatttgcgtaaattactcgtatggcacagccatactatatgtggtaaca 169  Q
      ||| |||||||||||||||||||| || ||||||||||||||||||||||| ||||    
T  11780 ccgagagggtatttgcgtaaattactggtgtggcacagccatactatatgtgggaaca 11723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 110; Significance: 3e-55; HSPs: 67)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 13 - 169
Target Start/End: Complemental strand, 20349557 - 20349400
Alignment:
Q  13 aaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacattt-cctcggcagttaactacagtcggattttaaattcctcggcagttaactg 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||| ||||||||||| |||||||||    
T  20349557 aaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacattttcctcggcagttaactgcagccggatttcaaattcctcggtagttaactg 20349458  T
Q  112 ttgagggggtatttgcgtaaattactcgtatggcacagccatactatatgtggtaaca 169  Q
      ||| |||||||||||||||||||| || ||||||||||||||||||||||| ||||    
T  20349457 ccgagagggtatttgcgtaaattactggtgtggcacagccatactatatgtgggaaca 20349400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 9 - 122
Target Start/End: Complemental strand, 5078044 - 5077931
Alignment:
Q  9 gaagaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacatttcctcggcagttaactacagtcggattttaaattcctcggcagttaa 108  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||| ||| ||||||||    
T  5078044 gaagaaaatagtgtgtagggggagcaggtggctgtttcatctgatgaaacatttcctcggcagttaactgcagtcggatttcaaatttctcagcagttaa 5077945  T
Q  109 ctgttgagggggta 122  Q
    |||  |||||||||    
T  5077944 ctgccgagggggta 5077931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 9 - 110
Target Start/End: Complemental strand, 41453942 - 41453840
Alignment:
Q  9 gaagaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaaca-tttcctcggcagttaactacagtcggattttaaattcctcggcagtta 107  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||| ||||||| |||||||||||||||||    
T  41453942 gaagaaaatagtgtgtagggggagcaggtggctgtttcatcggatgaaacattttcctcggcagttaactgcagccggatttcaaattcctcggcagtta 41453843  T
Q  108 act 110  Q
    |||    
T  41453842 act 41453840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 9 - 122
Target Start/End: Complemental strand, 23913960 - 23913847
Alignment:
Q  9 gaagaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacatttcctcggcagttaactacagtcggattttaaattcctcggcagttaa 108  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||| ||| |||| || ||||||||||| ||||||    
T  23913960 gaagaaaatagtgtgtagggggagcaggtggctgtttcatctgatgaaacatttcctcagcagttaactgcagccggaattcaaattcctcggtagttaa 23913861  T
Q  109 ctgttgagggggta 122  Q
    ||| ||||||||||    
T  23913860 ctgctgagggggta 23913847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 9 - 106
Target Start/End: Original strand, 29356634 - 29356732
Alignment:
Q  9 gaagaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaaca-tttcctcggcagttaactacagtcggattttaaattcctcggcagtt 106  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| |||  |||||| ||||||||||||||||    
T  29356634 gaagaaaatagtgtgtagggggagcaggtggctgtttcatcggatgaaacattttcctcggcagttaactgcagctggatttcaaattcctcggcagtt 29356732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 9 - 122
Target Start/End: Complemental strand, 44465700 - 44465586
Alignment:
Q  9 gaagaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaaca-tttcctcggcagttaactacagtcggattttaaattcctcggcagtta 107  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||| ||| |||| || ||||||||||| |||||    
T  44465700 gaagaaaatagtgtgtagggggagcaggtggctgtttcatcggatgaaacattttcctcggcagtaaactgcagccggaattcaaattcctcggtagtta 44465601  T
Q  108 actgttgagggggta 122  Q
    ||||  |||||||||    
T  44465600 actgccgagggggta 44465586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 9 - 111
Target Start/End: Complemental strand, 30905873 - 30905772
Alignment:
Q  9 gaagaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacatttcctcggcagttaactacagtcggattttaaattcctcggcagttaa 108  Q
    |||||||||||||||||||||| |||||| ||||||||||| ||||||||||| ||||||||||||||| ||| ||||||| ||||| ||||||||||||    
T  30905873 gaagaaaatagtgtgtaggggg-gcaggtggctgtttcatctgatgaaacattccctcggcagttaactgcagccggatttcaaatttctcggcagttaa 30905775  T
Q  109 ctg 111  Q
    |||    
T  30905774 ctg 30905772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 15047412 - 15047341
Alignment:
Q  9 gaagaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaaca-tttcctcggcagttaactac 79  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  15047412 gaagaaaatagtgtatagggggagcaggtagctgtttcatcggatgaaacattttcctcggcagttaactac 15047341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 31945808 - 31945875
Alignment:
Q  13 aaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaaca-tttcctcggcagttaactac 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  31945808 aaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacattttcctcggcagttaactac 31945875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 3948409 - 3948476
Alignment:
Q  13 aaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacattt-cctcggcagttaactac 79  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  3948409 aaaatagtgtgtagggggagcaggtagctgtttcatcgtatgaaacatttccctcggcagttaactac 3948476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 13 - 79
Target Start/End: Complemental strand, 3983213 - 3983146
Alignment:
Q  13 aaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacattt-cctcggcagttaactac 79  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  3983213 aaaatagtgtgtagggggagcaggtagctgtttcatcgtatgaaacatttccctcggcagttaactac 3983146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 38776073 - 38776140
Alignment:
Q  13 aaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacattt-cctcggcagttaactac 79  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  38776073 aaaatagtgtgtagggggagcaggtagctgtttcatcgtatgaaacatttccctcggcagttaactac 38776140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 61 - 159
Target Start/End: Complemental strand, 15047333 - 15047235
Alignment:
Q  61 ttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactata 159  Q
    ||||||||||||||||| ||| ||||||| |||||||||||||||||||||  ||||| ||||||  |||| |||| ||| ||||||||||||||||||    
T  15047333 ttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgagggagtatttatgtaatttacccgtgtggcacagccatactata 15047235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 44621061 - 44621129
Alignment:
Q  9 gaagaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacatttcctcggcagttaact 77  Q
    ||||||||||| ||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||    
T  44621061 gaagaaaatagagtgtagggggagcaggtggctgtttcatctgatgaaacatatcctcggcagttaact 44621129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 14 - 111
Target Start/End: Complemental strand, 4516130 - 4516032
Alignment:
Q  14 aaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacatt-tcctcggcagttaactacagtcggattttaaattcctcggcagttaactg 111  Q
    |||||||||||||||||||||||| |||||||||||  || ||||||  | |||||||||||||| ||| ||| |||| ||||||||||||||||||||    
T  4516130 aaatagtgtgtagggggagcaggtggctgtttcatctaataaaacataattctcggcagttaactgcagccggtttttgaattcctcggcagttaactg 4516032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 6562106 - 6562175
Alignment:
Q  9 gaagaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacatttcctcggcagttaactac 79  Q
    |||||||||||||| ||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  6562106 gaagaaaatagtgt-tagagggagcaggtggctgtttcatctgatgaaacatttcctcggcagttaactac 6562175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 9 - 178
Target Start/End: Complemental strand, 22397923 - 22397754
Alignment:
Q  9 gaagaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacatttcctcggcagttaactacagtcggatt-ttaaattcctcggcagtta 107  Q
    ||||||||||| ||||||||||||||||| ||| ||||||| |||||||||| |||||||||||||||| | | ||| ||  | ||  | ||||||||||    
T  22397923 gaagaaaatagagtgtagggggagcaggtggctatttcatctgatgaaacatatcctcggcagttaactgccgccggtttactcaaaacttcggcagtta 22397824  T
Q  108 actgttgagggggtatttgcgtaaattactcgtatggcacagccatactatatgtggtaacatcaattctc 178  Q
    ||||  ||  ||||||||  |||  |||||||| |||||||||| ||||||| |||| |||| ||||||||    
T  22397823 actgccga-agggtattttggtattttactcgtgtggcacagccttactatacgtgggaacaacaattctc 22397754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 96 - 169
Target Start/End: Complemental strand, 3983102 - 3983029
Alignment:
Q  96 cctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactatatgtggtaaca 169  Q
    ||||||||||||||||  ||| |||||||||||||||||||| || ||||||||||||||||||||||| ||||    
T  3983102 cctcggcagttaactgccgagagggtatttgcgtaaattactggtgtggcacagccatactatatgtgggaaca 3983029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 96 - 169
Target Start/End: Original strand, 31945919 - 31945992
Alignment:
Q  96 cctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactatatgtggtaaca 169  Q
    ||||||||||||||||  ||| |||||||||||||||||||| || ||||||||||||||||||||||| ||||    
T  31945919 cctcggcagttaactgccgagagggtatttgcgtaaattactggtgtggcacagccatactatatgtgggaaca 31945992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 96 - 169
Target Start/End: Original strand, 38776184 - 38776257
Alignment:
Q  96 cctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactatatgtggtaaca 169  Q
    ||||||||||||||||  ||| |||||||||||||||||||| || ||||||||||||||||||||||| ||||    
T  38776184 cctcggcagttaactgccgagagggtatttgcgtaaattactggtgtggcacagccatactatatgtgggaaca 38776257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 12 - 79
Target Start/End: Original strand, 50117724 - 50117791
Alignment:
Q  12 gaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacatttcctcggcagttaactac 79  Q
    ||||||||||||||| |||||||||| ||||||||||| ||| |||||||||||||||| ||||||||    
T  50117724 gaaaatagtgtgtagagggagcaggtggctgtttcatctgataaaacatttcctcggcatttaactac 50117791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 77
Target Start/End: Original strand, 9711597 - 9711663
Alignment:
Q  12 gaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacat-ttcctcggcagttaact 77  Q
    ||||||||| |||||||||||||||| ||||||||||| |||||||||| |||||||||||||||||    
T  9711597 gaaaatagtatgtagggggagcaggtggctgtttcatctgatgaaacatattcctcggcagttaact 9711663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 60 - 178
Target Start/End: Original strand, 30910024 - 30910142
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactata 159  Q
    |||||||||||||||||| ||| ||||||| |||||||||| ||||||||||  ||||||||||||| |||| ||||| || |  | |||||| || | |    
T  30910024 tttcctcggcagttaactgcagccggatttcaaattcctcgacagttaactgccgagggggtatttgggtaatttacttgtgtttctcagccaaacaaca 30910123  T
Q  160 tgtggtaacatcaattctc 178  Q
    ||||| |||| ||||||||    
T  30910124 tgtgggaacagcaattctc 30910142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 60 - 180
Target Start/End: Complemental strand, 4883285 - 4883166
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactata 159  Q
    |||||||||||||||||| ||| || ||||  ||  | |||||||||||||||||| |||||||||| |||| |||||||| || |||||||| || | |    
T  4883285 tttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgttga-ggggtatttgagtaatttactcgtgtgacacagccaaaccaaa 4883187  T
Q  160 tgtggtaacatcaattctctt 180  Q
    ||||| |||| ||||||||||    
T  4883186 tgtgggaacaacaattctctt 4883166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 12 - 79
Target Start/End: Original strand, 8460043 - 8460111
Alignment:
Q  12 gaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacat-ttcctcggcagttaactac 79  Q
    |||||||||||||||||| ||||||| ||||||||||| |||||||||| || ||||||||||||||||    
T  8460043 gaaaatagtgtgtaggggaagcaggtggctgtttcatctgatgaaacatatttctcggcagttaactac 8460111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 59 - 122
Target Start/End: Original strand, 6562181 - 6562244
Alignment:
Q  59 atttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggta 122  Q
    ||||||||||||||||||| ||| ||||||| |||||||||||||||||||||  |||||||||    
T  6562181 atttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgagggggta 6562244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 60 - 126
Target Start/End: Complemental strand, 6557967 - 6557901
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggtatttg 126  Q
    |||||||||||||||||| ||| || |||| |||||||||||||||||||||  |||||||||||||    
T  6557967 tttcctcggcagttaactgcagccgaatttcaaattcctcggcagttaactgccgagggggtatttg 6557901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 46973328 - 46973263
Alignment:
Q  14 aaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacat-ttcctcggcagttaacta 78  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||  | |||||||||||||||    
T  46973328 aaatagtgtgtagggggagcaggtggctgtttcatctgatgaaacataattctcggcagttaacta 46973263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 96 - 163
Target Start/End: Original strand, 3948460 - 3948527
Alignment:
Q  96 cctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactatatgtg 163  Q
    |||||||||||||||   ||| |||||||||||||||||||| || ||||||| ||||||||||||||    
T  3948460 cctcggcagttaactaccgagagggtatttgcgtaaattactggtgtggcacaaccatactatatgtg 3948527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 60 - 111
Target Start/End: Original strand, 41804054 - 41804105
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactg 111  Q
    |||||||||||||||||| ||||||| |||| ||||||||||||||||||||    
T  41804054 tttcctcggcagttaactgcagtcggtttttgaattcctcggcagttaactg 41804105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 60 - 111
Target Start/End: Original strand, 44470032 - 44470083
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactg 111  Q
    |||||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  44470032 tttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactg 44470083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 60 - 111
Target Start/End: Complemental strand, 52802182 - 52802131
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactg 111  Q
    |||||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  52802182 tttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactg 52802131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 13629521 - 13629459
Alignment:
Q  9 gaagaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacatttcctcggcag 71  Q
    ||||||||||| ||||||||||||||||| ||||||||||| ||||||| || ||||| ||||    
T  13629521 gaagaaaatagagtgtagggggagcaggtggctgtttcatctgatgaaatatatcctcagcag 13629459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 37015018 - 37014952
Alignment:
Q  12 gaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacat-ttcctcggcagttaact 77  Q
    ||||| ||| |||||||||| ||||| ||||||||||| |||||||||| |||||||||||||||||    
T  37015018 gaaaaaagtatgtagggggatcaggtggctgtttcatctgatgaaacatattcctcggcagttaact 37014952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 12 - 60
Target Start/End: Complemental strand, 1654871 - 1654823
Alignment:
Q  12 gaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacat 60  Q
    ||||||||||||||||||||||||||| |||||||||  ||||||||||    
T  1654871 gaaaatagtgtgtagggggagcaggtaactgtttcatacgatgaaacat 1654823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 60 - 112
Target Start/End: Complemental strand, 11183238 - 11183186
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgt 112  Q
    |||||||||||||||||| ||| |||||||| |||||||| ||||||||||||    
T  11183238 tttcctcggcagttaactgcagccggatttttaattcctcagcagttaactgt 11183186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 60 - 120
Target Start/End: Original strand, 52805554 - 52805614
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgaggggg 120  Q
    ||||||||||| |||||||||| ||||||| |||||| ||||||||||||||  |||||||    
T  52805554 tttcctcggcaattaactacagccggatttcaaattcgtcggcagttaactgccgaggggg 52805614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 60 - 111
Target Start/End: Complemental strand, 46973256 - 46973205
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactg 111  Q
    |||||||||||||||||| ||| ||| |||| ||||||||||||||||||||    
T  46973256 tttcctcggcagttaactgcagccggtttttgaattcctcggcagttaactg 46973205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 118
Target Start/End: Original strand, 19499133 - 19499191
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgaggg 118  Q
    |||||||||||||||||| ||| || |||||||||| ||| |||||||||||| |||||    
T  19499133 tttcctcggcagttaactgcagccgaattttaaatttctcagcagttaactgtcgaggg 19499191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 114
Target Start/End: Original strand, 40057675 - 40057729
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttg 114  Q
    |||||||||||||||||||||||||  |||||||||||||  || ||||||||||    
T  40057675 tttcctcggcagttaactacagtcgatttttaaattcctcaacaattaactgttg 40057729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 3732447 - 3732492
Alignment:
Q  133 ttactcgtatggcacagccatactatatgtggtaacatcaattctc 178  Q
    |||||||| ||||||||||||||||||||||| |||| ||||||||    
T  3732447 ttactcgtgtggcacagccatactatatgtgggaacagcaattctc 3732492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 19924734 - 19924689
Alignment:
Q  133 ttactcgtatggcacagccatactatatgtggtaacatcaattctc 178  Q
    |||||||| ||||||||||||||||||||||| |||| ||||||||    
T  19924734 ttactcgtgtggcacagccatactatatgtgggaacagcaattctc 19924689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 30890040 - 30889995
Alignment:
Q  133 ttactcgtatggcacagccatactatatgtggtaacatcaattctc 178  Q
    |||||||| ||||||||||||||||||||||| |||| ||||||||    
T  30890040 ttactcgtgtggcacagccatactatatgtgggaacaacaattctc 30889995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 180
Target Start/End: Original strand, 586626 - 586745
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactata 159  Q
    |||||||||||||||||| ||| || ||||  ||  | ||||||||||||||  || ||| |||||| |||| |||||||| ||||||||||| || | |    
T  586626 tttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaaggg-tatttgagtaatttactcgtgtggcacagccaaaccaaa 586724  T
Q  160 tgtggtaacatcaattctctt 180  Q
     |||| |||| ||||||||||    
T  586725 agtgggaacagcaattctctt 586745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 79
Target Start/End: Original strand, 19054196 - 19054264
Alignment:
Q  12 gaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacat-ttcctcggcagttaactac 79  Q
    ||||||||||||||||||||||| ||  |||||| ||  |||||||||| || ||||||||||||||||    
T  19054196 gaaaatagtgtgtagggggagcacgtgactgttttatttgatgaaacatatttctcggcagttaactac 19054264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 120
Target Start/End: Original strand, 23276129 - 23276189
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgaggggg 120  Q
    ||||||||||||||||||  || |||||||| |||||||| |||||||||||  |||||||    
T  23276129 tttcctcggcagttaactgtagccggatttttaattcctcagcagttaactgccgaggggg 23276189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 120
Target Start/End: Original strand, 23359370 - 23359430
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgaggggg 120  Q
    ||||||||| |||||||| ||| ||||||| ||||||||||||| |||||||  |||||||    
T  23359370 tttcctcggtagttaactgcagccggatttcaaattcctcggcaattaactgccgaggggg 23359430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 120
Target Start/End: Complemental strand, 27485107 - 27485051
Alignment:
Q  64 ctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgaggggg 120  Q
    |||||||||||||| ||| |||||||| ||||||| ||||||||||||  |||||||    
T  27485107 ctcggcagttaactgcagccggatttttaattcctaggcagttaactgccgaggggg 27485051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 178
Target Start/End: Original strand, 38633236 - 38633292
Alignment:
Q  122 atttgcgtaaattactcgtatggcacagccatactatatgtggtaacatcaattctc 178  Q
    ||||| |||| |||||||| ||||||||||| ||||||||||| |||| ||||||||    
T  38633236 atttgagtaatttactcgtgtggcacagccaaactatatgtgggaacaacaattctc 38633292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 178
Target Start/End: Complemental strand, 43011845 - 43011762
Alignment:
Q  94 ttcctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactatatgtggtaacatcaattctc 178  Q
    ||||||||||||||||||  |||||| |||||| |||| |||||||| ||||||||||| || | | |||| |||| ||||||||    
T  43011845 ttcctcggcagttaactgccgagggg-tatttgagtaatttactcgtgtggcacagccaaaccaaaagtgggaacaacaattctc 43011762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 60 - 119
Target Start/End: Complemental strand, 8459036 - 8458978
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggg 119  Q
    |||||||||||||||||| ||||||| ||| ||||||| ||||||||||||  |||||||    
T  8459036 tttcctcggcagttaactgcagtcgg-tttcaaattccacggcagttaacttctgagggg 8458978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 14 - 76
Target Start/End: Original strand, 19499060 - 19499123
Alignment:
Q  14 aaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacat-ttcctcggcagttaac 76  Q
    ||||||||||||||||||||||||  || ||||||| |||||||||| || ||| |||||||||    
T  19499060 aaatagtgtgtagggggagcaggtgactctttcatctgatgaaacatatttctctgcagttaac 19499123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 60 - 111
Target Start/End: Original strand, 27115844 - 27115895
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactg 111  Q
    |||| ||||||||||||| ||| ||| ||||||||||||||||| |||||||    
T  27115844 tttcttcggcagttaactgcagccggtttttaaattcctcggcaattaactg 27115895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 60 - 111
Target Start/End: Original strand, 35258893 - 35258944
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactg 111  Q
    |||||||||  ||||||| ||| |||||||| ||||||||||||||||||||    
T  35258893 tttcctcgggtgttaactgcagccggatttttaattcctcggcagttaactg 35258944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 60 - 111
Target Start/End: Complemental strand, 46141834 - 46141783
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactg 111  Q
    |||||||||||||||||| ||| ||| | || ||||||||||||||||||||    
T  46141834 tttcctcggcagttaactgcagccggttattgaattcctcggcagttaactg 46141783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 64 - 111
Target Start/End: Original strand, 49927538 - 49927585
Alignment:
Q  64 ctcggcagttaactacagtcggattttaaattcctcggcagttaactg 111  Q
    ||||||||||||||| || ||| |||||||||| ||||||||||||||    
T  49927538 ctcggcagttaactatagccggtttttaaattcttcggcagttaactg 49927585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 7981087 - 7981133
Alignment:
Q  14 aaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacat 60  Q
    |||||||||||||||||||||||| | |||||||||  |||||||||    
T  7981087 aaatagtgtgtagggggagcaggtggttgtttcatcttatgaaacat 7981133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 70 - 120
Target Start/End: Complemental strand, 19054101 - 19054051
Alignment:
Q  70 agttaactacagtcggattttaaattcctcggcagttaactgttgaggggg 120  Q
    |||||||| ||| ||| |||| ||||||||||||||||||||| |||||||    
T  19054101 agttaactgcagccggtttttgaattcctcggcagttaactgtcgaggggg 19054051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 60 - 178
Target Start/End: Complemental strand, 19914518 - 19914401
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactata 159  Q
    |||||||||||||||||| ||| || ||||  ||  | |||| |||||||||  ||||||  ||||| |||| |||||||| ||||||||||| || | |    
T  19914518 tttcctcggcagttaactgcagccgtatttctaaaacttcggaagttaactgccgaggggc-atttgagtaatttactcgtgtggcacagccaaacaaca 19914420  T
Q  160 tgtggtaacatcaattctc 178  Q
    ||||| |||| ||||||||    
T  19914419 tgtgggaacaacaattctc 19914401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 48751431 - 48751477
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagtt 106  Q
    ||||||||||| |||||| ||| |||||||| |||||||||||||||    
T  48751431 tttcctcggcaattaactgcagccggatttttaattcctcggcagtt 48751477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 60 - 122
Target Start/End: Original strand, 51289981 - 51290043
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggta 122  Q
    |||||||||||||||||| ||  |||||||| |||||||| | |||||||||  |||||||||    
T  51289981 tttcctcggcagttaactgcaaccggatttttaattcctcagtagttaactgccgagggggta 51290043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 13173961 - 13173896
Alignment:
Q  13 aaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacat-ttcctcggcagttaact 77  Q
    |||||||| ||||||||||| |||| ||||||||| | ||||||||||  | ||||||||||||||    
T  13173961 aaaatagtatgtagggggagtaggtggctgtttcaactgatgaaacataattctcggcagttaact 13173896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 13629383 - 13629338
Alignment:
Q  133 ttactcgtatggcacagccatactatatgtggtaacatcaattctc 178  Q
    |||||||| ||||||| ||||||||||||||| |||| ||||||||    
T  13629383 ttactcgtgtggcacaaccatactatatgtgggaacagcaattctc 13629338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 26879389 - 26879434
Alignment:
Q  133 ttactcgtatggcacagccatactatatgtggtaacatcaattctc 178  Q
    ||||| || ||||||||||||||||||||||| |||| ||||||||    
T  26879389 ttactggtgtggcacagccatactatatgtgggaacaacaattctc 26879434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 79
Target Start/End: Original strand, 50117811 - 50117860
Alignment:
Q  30 gagcaggtagctgtttcatcggatgaaacatttcctcggcagttaactac 79  Q
    |||||| | ||||||||||| ||| |||||||||||||||| ||||||||    
T  50117811 gagcagatggctgtttcatctgataaaacatttcctcggcatttaactac 50117860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 60 - 120
Target Start/End: Original strand, 9711672 - 9711732
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgaggggg 120  Q
    |||||||||||||||||| |   |||||||  |||||||||||||||||||| ||| ||||    
T  9711672 tttcctcggcagttaactgcgaccggatttctaattcctcggcagttaactgctgatgggg 9711732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 22345383 - 22345319
Alignment:
Q  16 atagtgtgtagggggagcaggtagctgtttcatcggatgaaacat-ttcctcggcagttaactac 79  Q
    ||||| ||||||| || ||| | ||||||||||| |||||||||| || ||||||||||||||||    
T  22345383 atagtatgtagggtgaacagatggctgtttcatccgatgaaacatatttctcggcagttaactac 22345319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 97; Significance: 1e-47; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 9 - 178
Target Start/End: Original strand, 37820823 - 37820986
Alignment:
Q  9 gaagaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaaca-tttcctcggcagttaactacagtcggattttaaattcctcggcagtta 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||| |||||||||||||        
T  37820823 gaagaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacattttcctcggcagttaactgcagccggatttcaaattcctcggca---- 37820918  T
Q  108 actgttgagggggtatttgcgtaaattactcgtatggcacagccatactatatgtggtaacatcaattctc 178  Q
       ||  ||||||||||||||||| |||||||| ||||||| ||||||||||||||| |||| ||||||||    
T  37820919 ---gtgcagggggtatttgcgtaatttactcgtgtggcacaaccatactatatgtgggaacaacaattctc 37820986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 13 - 169
Target Start/End: Complemental strand, 14279950 - 14279792
Alignment:
Q  13 aaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaaca-tttcctcggcagttaactacagtcggatt-ttaaattcctcggcagttaact 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| | | ||| ||  ||||  |||||| ||||||||    
T  14279950 aaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacattttcctcgggagttaactgccgccggtttcctaaaaacctcggtagttaact 14279851  T
Q  111 gttgagggggtatttgcgtaaattactcgtatggcacagccatactatatgtggtaaca 169  Q
    |  ||| |||||||||||||||||||| || ||||||||||||||||||||||| ||||    
T  14279850 gccgagagggtatttgcgtaaattactggtgtggcacagccatactatatgtgggaaca 14279792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 9 - 151
Target Start/End: Original strand, 13568044 - 13568187
Alignment:
Q  9 gaagaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaaca-tttcctcggcagttaactacagtcggattttaaattcctcggcagtta 107  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||| ||| ||||||| |||||||||||||||||    
T  13568044 gaagaaaatagtgtgtaggtggagcaggtagctgtttcatcagatgaaacattttcctcggcagttaactgcagccggatttcaaattcctcggcagtta 13568143  T
Q  108 actgttgagggggtatttgcgtaaattactcgtatggcacagcc 151  Q
    |||   || ||||||    ||| | |||||||||||||||||||    
T  13568144 actaccgatggggtaaaaacgtcatttactcgtatggcacagcc 13568187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 9 - 107
Target Start/End: Original strand, 7021827 - 7021926
Alignment:
Q  9 gaagaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaaca-tttcctcggcagttaactacagtcggattttaaattcctcggcagtta 107  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||| ||||||| ||||||||| |||||||    
T  7021827 gaagaaaatagtgtgtagggggagcaggtggctgtttcatcggatgaaacattttcctcggcagttaactgcagccggatttcaaattcctcagcagtta 7021926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 9 - 122
Target Start/End: Original strand, 27867789 - 27867903
Alignment:
Q  9 gaagaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaaca-tttcctcggcagttaactacagtcggattttaaattcctcggcagtta 107  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||| |||| ||| |||| || |||||||||||||||||    
T  27867789 gaagaaaatagtgtgtagggggagcaggtggttgtttcatcggatgaaacattttcctcggcagtaaactgcagccggaattcaaattcctcggcagtta 27867888  T
Q  108 actgttgagggggta 122  Q
    ||||  |||||||||    
T  27867889 actgccgagggggta 27867903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 25897023 - 25897093
Alignment:
Q  9 gaagaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacatttcctcggcagttaactac 79  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  25897023 gaagaaaatagcgtgtagggggagcaggtggctgtttcatcggatgaaacatttcctcggcagttaactac 25897093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 1035313 - 1035244
Alignment:
Q  9 gaagaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacatttcctcggcagttaacta 78  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  1035313 gaagaaaatagtgtgtagggggagcaggtggctgtttcatctgatgaaacatttcctcggcagttaacta 1035244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 12 - 79
Target Start/End: Complemental strand, 28387395 - 28387328
Alignment:
Q  12 gaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacatttcctcggcagttaactac 79  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||    
T  28387395 gaaaatagtgtgtagggggagcaggtggctgtttcatctgatgaaacatttcatcggcagttaactac 28387328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 34077897 - 34077826
Alignment:
Q  9 gaagaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaaca-tttcctcggcagttaactac 79  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||| ||||||||    
T  34077897 gaagaaaatagtgtgtagggggagcaggtgactgtttcatcggatgaaacattttcctcggcaattaactac 34077826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 28886362 - 28886415
Alignment:
Q  9 gaagaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacattt 62  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  28886362 gaagaaaatagtgtgtagggggagcaggtagctgtttcatcagatgaaacattt 28886415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 11033406 - 11033476
Alignment:
Q  9 gaagaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacatttcctcggcagttaactac 79  Q
    ||||||||||| ||||||||||||||||| ||| ||||||| |||||||||| ||||||||| ||||||||    
T  11033406 gaagaaaatagagtgtagggggagcaggtggctatttcatctgatgaaacatatcctcggcaattaactac 11033476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 12 - 79
Target Start/End: Original strand, 4204157 - 4204225
Alignment:
Q  12 gaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacat-ttcctcggcagttaactac 79  Q
    ||||||||||||||| |||||||||||| ||||||||| |||||||||| || ||||||||||||||||    
T  4204157 gaaaatagtgtgtagagggagcaggtagttgtttcatctgatgaaacatatttctcggcagttaactac 4204225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 60 - 120
Target Start/End: Original strand, 39743169 - 39743229
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgaggggg 120  Q
    |||||||||||||||||| |||||| |||| |||||||||||||||||||||| |||||||    
T  39743169 tttcctcggcagttaactgcagtcgaatttcaaattcctcggcagttaactgtcgaggggg 39743229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 60 - 120
Target Start/End: Complemental strand, 25890046 - 25889986
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgaggggg 120  Q
    ||||||||| |||||||| ||||||||||| |||||||||||||||| |||| ||||||||    
T  25890046 tttcctcggtagttaactgcagtcggatttcaaattcctcggcagtttactgctgaggggg 25889986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 77
Target Start/End: Complemental strand, 21979691 - 21979628
Alignment:
Q  14 aaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacatttcctcggcagttaact 77  Q
    ||||||||||||||||||||| || ||||||||||| |||||||||   |||||||||||||||    
T  21979691 aaatagtgtgtagggggagcatgtggctgtttcatctgatgaaacagcgcctcggcagttaact 21979628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 59 - 122
Target Start/End: Complemental strand, 28387322 - 28387259
Alignment:
Q  59 atttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggta 122  Q
    |||||||||||| |||||| ||| |||| || |||||||||||||||||||||| |||||||||    
T  28387322 atttcctcggcaattaactgcagccggaattcaaattcctcggcagttaactgtcgagggggta 28387259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 60 - 111
Target Start/End: Complemental strand, 34122576 - 34122525
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactg 111  Q
    |||||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  34122576 tttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactg 34122525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 60
Target Start/End: Original strand, 38860146 - 38860197
Alignment:
Q  9 gaagaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacat 60  Q
    ||||||||||| ||||||||||||||||| ||||||||||| ||||||||||    
T  38860146 gaagaaaatagagtgtagggggagcaggtggctgtttcatctgatgaaacat 38860197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 60 - 118
Target Start/End: Original strand, 8702219 - 8702277
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgaggg 118  Q
    ||||||| |||||||||| ||||| |||||| ||||||||||||||||||||| |||||    
T  8702219 tttcctcagcagttaactgcagtcagatttttaattcctcggcagttaactgtcgaggg 8702277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 60 - 122
Target Start/End: Original strand, 17966907 - 17966969
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggta 122  Q
    ||||||||| |||||||| |||||||||||| |||| |||||||||||||||  |||||||||    
T  17966907 tttcctcggtagttaactgcagtcggatttttaatttctcggcagttaactgccgagggggta 17966969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 14 - 79
Target Start/End: Original strand, 18538283 - 18538349
Alignment:
Q  14 aaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacat-ttcctcggcagttaactac 79  Q
    |||||||||||||||||||||||| |||||||||||  |||||||||  | ||||||||||||||||    
T  18538283 aaatagtgtgtagggggagcaggtggctgtttcatctaatgaaacataattctcggcagttaactac 18538349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 14 - 79
Target Start/End: Complemental strand, 33993405 - 33993339
Alignment:
Q  14 aaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacat-ttcctcggcagttaactac 79  Q
    |||||||||||||||||||||||| ||||||||| | ||||||||||  | ||||||||||||||||    
T  33993405 aaatagtgtgtagggggagcaggtggctgtttcaactgatgaaacataattctcggcagttaactac 33993339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 12 - 76
Target Start/End: Original strand, 34123869 - 34123933
Alignment:
Q  12 gaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacatttcctcggcagttaac 76  Q
    ||||||||| ||||||||||||||||  |||||||||| |||||||||||  ||||| |||||||    
T  34123869 gaaaatagtatgtagggggagcaggtgactgtttcatctgatgaaacattctctcggtagttaac 34123933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 70 - 137
Target Start/End: Complemental strand, 7017554 - 7017487
Alignment:
Q  70 agttaactacagtcggattttaaattcctcggcagttaactgttgagggggtatttgcgtaaattact 137  Q
    |||||||| ||| ||||||| ||||||||| |||||||||| | ||||||||||||| |||| |||||    
T  7017554 agttaactgcagccggatttcaaattcctcagcagttaactatcgagggggtatttgggtaatttact 7017487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 60 - 151
Target Start/End: Original strand, 28388540 - 28388631
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagcc 151  Q
    |||||||||||||||||| |||  |||||| |||||||||||||| ||||||  ||||||| |   | ||||| ||||||| ||||||||||    
T  28388540 tttcctcggcagttaactgcagctggatttcaaattcctcggcagctaactgccgagggggcaaaagagtaaaatactcgtgtggcacagcc 28388631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 178
Target Start/End: Complemental strand, 3891535 - 3891418
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactata 159  Q
    |||||||||||||||||| ||| || ||||  ||  | ||||||||||||||  |||||| |||||| |||| |||||||| ||||||||||| | || |    
T  3891535 tttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgagggg-tatttgagtaatttactcgtgtggcacagccaaagtaaa 3891437  T
Q  160 tgtggtaacatcaattctc 178  Q
     |||| |||| ||||||||    
T  3891436 agtgggaacagcaattctc 3891418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 179
Target Start/End: Complemental strand, 11027074 - 11027028
Alignment:
Q  133 ttactcgtatggcacagccatactatatgtggtaacatcaattctct 179  Q
    |||||||| ||||||||||||||||||||||| |||| |||||||||    
T  11027074 ttactcgtgtggcacagccatactatatgtgggaacaacaattctct 11027028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 31098881 - 31098943
Alignment:
Q  12 gaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacat-ttcctcggcagtt 73  Q
    ||||||||| |||||||||||||| | ||||||||||| ||||||||||  ||||||||||||    
T  31098881 gaaaatagtatgtagggggagcagatggctgtttcatctgatgaaacataatcctcggcagtt 31098943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 19041211 - 19041256
Alignment:
Q  133 ttactcgtatggcacagccatactatatgtggtaacatcaattctc 178  Q
    |||||||| ||||||||||||||||||||||| |||| ||||||||    
T  19041211 ttactcgtgtggcacagccatactatatgtgggaacagcaattctc 19041256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 28241893 - 28241938
Alignment:
Q  133 ttactcgtatggcacagccatactatatgtggtaacatcaattctc 178  Q
    |||||||| ||||||||||||||||||||||| |||| ||||||||    
T  28241893 ttactcgtgtggcacagccatactatatgtgggaacaacaattctc 28241938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 38860262 - 38860307
Alignment:
Q  133 ttactcgtatggcacagccatactatatgtggtaacatcaattctc 178  Q
    |||||||| ||||||||||||||||||||||| |||| ||||||||    
T  38860262 ttactcgtgtggcacagccatactatatgtgggaacaacaattctc 38860307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 60 - 125
Target Start/End: Complemental strand, 39742627 - 39742562
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggtattt 125  Q
    |||||||||||||||||| ||||||| |||    ||||||||||||||||||  ||||||||||||    
T  39742627 tttcctcggcagttaactgcagtcggttttatttttcctcggcagttaactgcagagggggtattt 39742562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 112
Target Start/End: Complemental strand, 34682309 - 34682257
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgt 112  Q
    |||||||||||||||||| ||| ||| |||| ||||||||| |||||||||||    
T  34682309 tttcctcggcagttaactgcagccggtttttgaattcctcgacagttaactgt 34682257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 60 - 111
Target Start/End: Complemental strand, 17965901 - 17965850
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactg 111  Q
    |||||||||||||||||| |||||| ||||| ||||||||| || |||||||    
T  17965901 tttcctcggcagttaactgcagtcgaatttttaattcctcgacaattaactg 17965850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 60 - 111
Target Start/End: Complemental strand, 18307306 - 18307255
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactg 111  Q
    |||||||||||||||||||||| ||  |||| ||||||||| ||||||||||    
T  18307306 tttcctcggcagttaactacagccgattttttaattcctcgacagttaactg 18307255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 133 - 179
Target Start/End: Original strand, 11033556 - 11033602
Alignment:
Q  133 ttactcgtatggcacagccatactatatgtggtaacatcaattctct 179  Q
    |||||| | ||||||||||||||||||||||| |||| |||||||||    
T  11033556 ttactcatgtggcacagccatactatatgtgggaacagcaattctct 11033602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 133 - 175
Target Start/End: Original strand, 28886487 - 28886529
Alignment:
Q  133 ttactcgtatggcacagccatactatatgtggtaacatcaatt 175  Q
    |||||||| ||||||||||||||||||||||| ||||| ||||    
T  28886487 ttactcgtgtggcacagccatactatatgtgggaacataaatt 28886529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 60 - 110
Target Start/End: Complemental strand, 38968147 - 38968097
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaact 110  Q
    |||||||||||||||||| ||| ||||||||  ||||||||| ||||||||    
T  38968147 tttcctcggcagttaactgcagccggattttttattcctcggtagttaact 38968097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 60 - 120
Target Start/End: Original strand, 1397371 - 1397431
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgaggggg 120  Q
    |||| ||||||||||||| ||| |||||||  |||||||| |||||||||||  |||||||    
T  1397371 tttcatcggcagttaactgcagccggatttctaattcctcagcagttaactgccgaggggg 1397431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 60 - 120
Target Start/End: Complemental strand, 7757377 - 7757317
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgaggggg 120  Q
    |||||||||||||||||| ||| |||||||  ||  | ||||||||||||||| |||||||    
T  7757377 tttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactgtcgaggggg 7757317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 117
Target Start/End: Original strand, 18310047 - 18310099
Alignment:
Q  65 tcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagg 117  Q
    ||||||||||||| ||||||| | || ||||||||| |||||||||| |||||    
T  18310047 tcggcagttaactgcagtcggttattgaattcctcgacagttaactgctgagg 18310099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 60 - 120
Target Start/End: Original strand, 18538356 - 18538416
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgaggggg 120  Q
    |||||||||||||||||| ||| ||| |||| ||||||||| || |||||||  |||||||    
T  18538356 tttcctcggcagttaactgcagccggtttttgaattcctcgacaattaactgccgaggggg 18538416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 111
Target Start/End: Original strand, 25897099 - 25897151
Alignment:
Q  59 atttcctcggcagttaactacagtcggattttaaattcctcggcagttaactg 111  Q
    ||||||| ||||||||||| ||| |||| || ||||||||||| |||||||||    
T  25897099 atttcctgggcagttaactgcagccggagttcaaattcctcggtagttaactg 25897151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 60 - 120
Target Start/End: Original strand, 34123956 - 34124016
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgaggggg 120  Q
    |||||| ||||||||||| ||| ||||||| ||||| |||| ||||||||||  |||||||    
T  34123956 tttccttggcagttaactgcagccggatttcaaatttctcgacagttaactgccgaggggg 34124016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 60 - 120
Target Start/End: Complemental strand, 41798870 - 41798810
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgaggggg 120  Q
    |||| ||||||||||||| ||| ||||||| |||||| || |||||||||||  |||||||    
T  41798870 tttcttcggcagttaactgcagccggatttcaaattcttcagcagttaactgccgaggggg 41798810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 3e-39; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 13 - 169
Target Start/End: Original strand, 49566422 - 49566580
Alignment:
Q  13 aaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaaca-tttcctcggcagttaactacagtcggatt-ttaaattcctcggcagttaact 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| | | ||| ||  ||||  |||||||||||||||    
T  49566422 aaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacattttcctcggtagttaactgccgccggtttcctaaaaacctcggcagttaact 49566521  T
Q  111 gttgagggggtatttgcgtaaattactcgtatggcacagccatactatatgtggtaaca 169  Q
    |  ||| |||||||||||||||||||| || ||||||| ||||||||||||||| ||||    
T  49566522 gccgagagggtatttgcgtaaattactggtgtggcacaaccatactatatgtgggaaca 49566580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 1087963 - 1087895
Alignment:
Q  9 gaagaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacatttcctcggcagttaact 77  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  1087963 gaagaaaatagtgtgtagggggagcaggtagctgtttcatctgatgaaacatttcctcggcagttaact 1087895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 15999743 - 15999813
Alignment:
Q  9 gaagaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacatttcctcggcagttaactac 79  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  15999743 gaagaaaatagtgtgtagggggagcaggtggctgtttcatctgatgaaacatttcctcggcagttaactac 15999813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 9890123 - 9890053
Alignment:
Q  9 gaagaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacatttcctcggcagttaactac 79  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||    
T  9890123 gaagaaaatagtgtgtagggggagcaggtggctgtttcatctgatgaaacatatcctcggcagttaactac 9890053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 12 - 120
Target Start/End: Complemental strand, 4768779 - 4768670
Alignment:
Q  12 gaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacat-ttcctcggcagttaactacagtcggattttaaattcctcggcagttaact 110  Q
    ||||||||| ||||||||||||||||  |||||||||  |||||||||| || |||||||||||||| ||| | |||||| |||||||||||||||||||    
T  4768779 gaaaatagtatgtagggggagcaggtgactgtttcatatgatgaaacatatttctcggcagttaactgcagccagattttgaattcctcggcagttaact 4768680  T
Q  111 gttgaggggg 120  Q
    |  |||||||    
T  4768679 gccgaggggg 4768670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 13173363 - 13173293
Alignment:
Q  9 gaagaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacatttcctcggcagttaactac 79  Q
    |||||||||||  |||||||||||||||| ||||||||||| |||||||||| |||||||||||| |||||    
T  13173363 gaagaaaatagaatgtagggggagcaggtggctgtttcatcagatgaaacatatcctcggcagtttactac 13173293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 60 - 178
Target Start/End: Complemental strand, 15995774 - 15995656
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactata 159  Q
    |||||||||||||||||| ||| ||||||| ||||||||||||| |||||||  ||||||||||||| |||| ||||| || |  | |||||| || | |    
T  15995774 tttcctcggcagttaactgcagccggatttcaaattcctcggcatttaactgccgagggggtatttgggtaatttacttgtgtttctcagccaaacaaca 15995675  T
Q  160 tgtggtaacatcaattctc 178  Q
    ||||| |||| ||||||||    
T  15995674 tgtgggaacagcaattctc 15995656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 19073599 - 19073669
Alignment:
Q  9 gaagaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacatttcctcggcagttaactac 79  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||   | |||||||||||||||    
T  19073599 gaagaaaatagtgtgtagggggagcaggtggctgtttcatctgatgaaacagaccatcggcagttaactac 19073669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 50 - 142
Target Start/End: Complemental strand, 3403910 - 3403818
Alignment:
Q  50 ggatgaaacattt-cctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggtatttgcgtaaattactcgtat 142  Q
    ||||||||||||| ||||||||||||||| ||| ||||||| |||||||||||||||||||||  ||  |||||||||||||| ||||| ||||    
T  3403910 ggatgaaacattttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccga-agggtatttgcgtaatttacttgtat 3403818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 60 - 137
Target Start/End: Complemental strand, 19069239 - 19069162
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggtatttgcgtaaattact 137  Q
    |||||||||||||||||| ||| ||||||| ||||||||||||| |||||||  ||||||||||||| |||| |||||    
T  19069239 tttcctcggcagttaactgcagccggatttcaaattcctcggcatttaactgccgagggggtatttgggtaatttact 19069162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 59 - 178
Target Start/End: Complemental strand, 50274813 - 50274694
Alignment:
Q  59 atttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactat 158  Q
    ||||||||||||||||||| ||| |||||||  ||||||||||||||||||||  ||||||| |    |||||||||||||| || ||||||| ||  |     
T  50274813 atttcctcggcagttaactgcagccggatttctaattcctcggcagttaactgccgagggggcaaaaacgtaaattactcgtgtgccacagccctatcaa 50274714  T
Q  159 atgtggtaacatcaattctc 178  Q
    |||||| |||| ||||||||    
T  50274713 atgtgggaacaacaattctc 50274694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 60 - 122
Target Start/End: Complemental strand, 9890046 - 9889984
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggta 122  Q
    |||||||||||||||||| ||| ||||||| |||||||||||||||||||||  |||||||||    
T  9890046 tttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgagggggta 9889984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 60 - 178
Target Start/End: Original strand, 15999820 - 15999938
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactata 159  Q
    |||||||||||||||| | ||| ||||||| ||||| |||||||||||||||  ||||||||||||| |||| ||||| || |  | |||||| || | |    
T  15999820 tttcctcggcagttaattgcagccggatttcaaatttctcggcagttaactgccgagggggtatttgggtaatttacttgtgtttctcagccaaacaaca 15999919  T
Q  160 tgtggtaacatcaattctc 178  Q
    ||||| |||| ||||||||    
T  15999920 tgtgggaacaacaattctc 15999938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 21 - 111
Target Start/End: Complemental strand, 30042568 - 30042478
Alignment:
Q  21 gtgtagggggagcaggtagctgtttcatcggatgaaacatttcctcggcagttaactacagtcggattttaaattcctcggcagttaactg 111  Q
    ||||||| ||||||||| ||||||||||| ||||||||||||| ||||||||||||| ||| |   |||| | |||||||||| |||||||    
T  30042568 gtgtaggaggagcaggtggctgtttcatctgatgaaacatttcttcggcagttaactgcagccaattttttatttcctcggcacttaactg 30042478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 4975891 - 4975827
Alignment:
Q  13 aaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacat-ttcctcggcagttaac 76  Q
    |||||||| ||||||||||||||||  |||||||||| |||||||||| ||||||||||||||||    
T  4975891 aaaatagtatgtagggggagcaggtgactgtttcatctgatgaaacatattcctcggcagttaac 4975827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 12 - 79
Target Start/End: Original strand, 4979863 - 4979931
Alignment:
Q  12 gaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacat-ttcctcggcagttaactac 79  Q
    ||||||||| ||||||||||||||||  |||||||||| |||||| ||| |||||||||||||||||||    
T  4979863 gaaaatagtatgtagggggagcaggtgactgtttcatctgatgaagcatattcctcggcagttaactac 4979931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 12 - 79
Target Start/End: Complemental strand, 21471030 - 21470962
Alignment:
Q  12 gaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacat-ttcctcggcagttaactac 79  Q
    |||||||||||||| |||||||||||  |||||||||| |||||||||| || ||||||||||||||||    
T  21471030 gaaaatagtgtgtatggggagcaggtgactgtttcatccgatgaaacatatttctcggcagttaactac 21470962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 100
Target Start/End: Original strand, 18581280 - 18581367
Alignment:
Q  14 aaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacat-ttcctcggcagttaactacagtcggattttaaattcctcg 100  Q
    |||||||||||||||||||||||| | ||||||||| ||||||||||  | |||||||||||||| |||  || |||| |||||||||    
T  18581280 aaatagtgtgtagggggagcaggtggttgtttcatctgatgaaacataattctcggcagttaactgcagctggtttttgaattcctcg 18581367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 13173213 - 13173168
Alignment:
Q  133 ttactcgtatggcacagccatactatatgtggtaacatcaattctc 178  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||    
T  13173213 ttactcgtgtggcacagccatactatatgtgggaacatcaattctc 13173168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 64 - 111
Target Start/End: Complemental strand, 1041983 - 1041936
Alignment:
Q  64 ctcggcagttaactacagtcggattttaaattcctcggcagttaactg 111  Q
    |||||||||||||| |||||||||||  ||||||||||||||||||||    
T  1041983 ctcggcagttaactgcagtcggatttctaattcctcggcagttaactg 1041936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 13182192 - 13182239
Alignment:
Q  133 ttactcgtatggcacagccatactatatgtggtaacatcaattctctt 180  Q
    |||||||| ||||||||||||||||||||||| |||| ||||||||||    
T  13182192 ttactcgtgtggcacagccatactatatgtgggaacaacaattctctt 13182239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 60 - 111
Target Start/End: Original strand, 36004297 - 36004348
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactg 111  Q
    |||||||| ||||||||||||||||| || ||||||||||| ||||||||||    
T  36004297 tttcctcgacagttaactacagtcggtttataaattcctcgacagttaactg 36004348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 60 - 179
Target Start/End: Original strand, 40833631 - 40833749
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactata 159  Q
    |||||||||||||||||| ||| || ||||  ||  | ||||||||||||||  |||||| |||||| |||| |||||||| ||||||||||| | || |    
T  40833631 tttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgagggg-tatttgagtaatttactcgtgtggcacagccaaagtaaa 40833729  T
Q  160 tgtggtaacatcaattctct 179  Q
     |||| |||| |||||||||    
T  40833730 agtgggaacaacaattctct 40833749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 178
Target Start/End: Original strand, 21022909 - 21023026
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactata 159  Q
    |||||||||||||||||| ||| || ||||  ||  | ||||||||||||||  ||||||  ||||| |||| |||||||| ||||||||||| || | |    
T  21022909 tttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaggggc-atttgagtaatttactcgtgtggcacagccaaaccaaa 21023007  T
Q  160 tgtggtaacatcaattctc 178  Q
    ||||| |||| ||||||||    
T  21023008 tgtgggaacagcaattctc 21023026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 120
Target Start/End: Complemental strand, 39588142 - 39588084
Alignment:
Q  62 tcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgaggggg 120  Q
    |||||||||||||||| |||||| ||||  ||||||||||||||||||||  |||||||    
T  39588142 tcctcggcagttaactgcagtcgaatttctaattcctcggcagttaactgccgaggggg 39588084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 179
Target Start/End: Complemental strand, 41793310 - 41793264
Alignment:
Q  133 ttactcgtatggcacagccatactatatgtggtaacatcaattctct 179  Q
    |||||||||||||||||||| ||||||||||| |||| |||||||||    
T  41793310 ttactcgtatggcacagccaaactatatgtgggaacagcaattctct 41793264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 1089678 - 1089723
Alignment:
Q  133 ttactcgtatggcacagccatactatatgtggtaacatcaattctc 178  Q
    |||||||| ||||||||||||||||||||||| |||| ||||||||    
T  1089678 ttactcgtgtggcacagccatactatatgtgggaacaacaattctc 1089723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 6181885 - 6181930
Alignment:
Q  133 ttactcgtatggcacagccatactatatgtggtaacatcaattctc 178  Q
    |||||||| ||||||||||||||||||||||| |||| ||||||||    
T  6181885 ttactcgtgtggcacagccatactatatgtgggaacaacaattctc 6181930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 49090426 - 49090381
Alignment:
Q  133 ttactcgtatggcacagccatactatatgtggtaacatcaattctc 178  Q
    |||||||| ||||||||||||||||||||||| |||| ||||||||    
T  49090426 ttactcgtgtggcacagccatactatatgtgggaacagcaattctc 49090381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 3450026 - 3450074
Alignment:
Q  12 gaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacat 60  Q
    |||||||||||||||||||||||||   |||||||||| ||||||||||    
T  3450026 gaaaatagtgtgtagggggagcaggggactgtttcatctgatgaaacat 3450074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 120
Target Start/End: Original strand, 37395212 - 37395272
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgaggggg 120  Q
    ||||||||||| |||||| ||| ||||||| |||||||||| ||||||| || ||||||||    
T  37395212 tttcctcggcaattaactgcagccggatttcaaattcctcgacagttaagtgctgaggggg 37395272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 152
Target Start/End: Original strand, 38369203 - 38369294
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagcca 152  Q
    |||||||||||||||||| ||| || ||||  ||  | ||||||||||||||  || ||| |||||| |||| ||||||||||||||||||||    
T  38369203 tttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaaggg-tatttgagtaatttactcgtatggcacagcca 38369294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 111
Target Start/End: Complemental strand, 41023439 - 41023387
Alignment:
Q  59 atttcctcggcagttaactacagtcggattttaaattcctcggcagttaactg 111  Q
    |||||||| |||||||||| ||| ||||||| ||||| |||||||||||||||    
T  41023439 atttcctcagcagttaactgcagccggatttcaaatttctcggcagttaactg 41023387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 60
Target Start/End: Complemental strand, 44049225 - 44049177
Alignment:
Q  12 gaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacat 60  Q
    ||||||||| |||||||||||||||| | ||||||||| ||||||||||    
T  44049225 gaaaatagtatgtagggggagcaggtggttgtttcatctgatgaaacat 44049177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 180
Target Start/End: Original strand, 50278819 - 50278939
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactata 159  Q
    |||||||||||||||||| ||| |||||||  ||||| ||| ||||||||||| ||||||  |    |||||||||||||| || |||| || ||  | |    
T  50278819 tttcctcggcagttaactgcagccggatttctaattcatcgacagttaactgtcgaggggacaaaaacgtaaattactcgtgtgccacaaccttatcaaa 50278918  T
Q  160 tgtggtaacatcaattctctt 180  Q
    ||||| |||| ||||||||||    
T  50278919 tgtgggaacaacaattctctt 50278939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 178
Target Start/End: Complemental strand, 52529203 - 52529147
Alignment:
Q  122 atttgcgtaaattactcgtatggcacagccatactatatgtggtaacatcaattctc 178  Q
    |||| ||||| |||||||| |||||||||||||| |||||||| |||| ||||||||    
T  52529203 atttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 52529147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 178
Target Start/End: Original strand, 54634098 - 54634154
Alignment:
Q  122 atttgcgtaaattactcgtatggcacagccatactatatgtggtaacatcaattctc 178  Q
    |||| ||||| |||||||| |||||||||||||| |||||||| |||| ||||||||    
T  54634098 atttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 54634154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 104
Target Start/End: Original strand, 55407814 - 55407858
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcag 104  Q
    |||||||||||||||||| ||| |||||||| |||||||||||||    
T  55407814 tttcctcggcagttaactgcagccggatttttaattcctcggcag 55407858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 60 - 111
Target Start/End: Original strand, 21472505 - 21472556
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactg 111  Q
    |||||||||||||||||| ||| ||  |||| ||||||||||||||||||||    
T  21472505 tttcctcggcagttaactgcagccgatttttgaattcctcggcagttaactg 21472556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 30726835 - 30726882
Alignment:
Q  133 ttactcgtatggcacagccatactatatgtggtaacatcaattctctt 180  Q
    |||||||| ||||||| ||||||||||||||| |||| ||||||||||    
T  30726835 ttactcgtgtggcacatccatactatatgtgggaacagcaattctctt 30726882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 41801031 - 41801078
Alignment:
Q  133 ttactcgtatggcacagccatactatatgtggtaacatcaattctctt 180  Q
    |||||||| || |||||||||||||||||||| |||| ||||||||||    
T  41801031 ttactcgtgtgacacagccatactatatgtgggaacagcaattctctt 41801078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 14 - 100
Target Start/End: Original strand, 51644447 - 51644534
Alignment:
Q  14 aaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacat-ttcctcggcagttaactacagtcggattttaaattcctcg 100  Q
    |||||||||||||||||||||| | ||||||||||  ||||||||||  |  ||||||||||||| ||| ||  |||| |||||||||    
T  51644447 aaatagtgtgtagggggagcagatggctgtttcatttgatgaaacataattatcggcagttaactgcagccgatttttgaattcctcg 51644534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 111
Target Start/End: Complemental strand, 17139723 - 17139626
Alignment:
Q  14 aaatagtgtgtagggggagcaggtagctgtttcatcggatgaaaca-tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactg 111  Q
    ||||||||| ||||| |||||| |  |||||||||| ||||||||| ||| |||||||||||||| ||| ||| ||||  ||| |||| ||||||||||    
T  17139723 aaatagtgtttagggagagcagatgactgtttcatctgatgaaacatttttctcggcagttaactgcagccgg-ttttttatttctcgacagttaactg 17139626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 60 - 110
Target Start/End: Complemental strand, 33383857 - 33383807
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaact 110  Q
    |||||||||||||||||| ||||||| ||||||| |||||| || ||||||    
T  33383857 tttcctcggcagttaactgcagtcggtttttaaaatcctcgacaattaact 33383807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 60 - 178
Target Start/End: Original strand, 51037489 - 51037606
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactata 159  Q
    |||||||||||||||| | ||| || ||||  ||  | ||||||||||||||  |||||   ||||| |||| |||||||| ||||||||||| |||| |    
T  51037489 tttcctcggcagttaattgcagccgtatttctaaaacttcggcagttaactgccgagggac-atttgagtaatttactcgtgtggcacagccaaactaaa 51037587  T
Q  160 tgtggtaacatcaattctc 178  Q
    ||||| |||| ||||||||    
T  51037588 tgtgggaacaacaattctc 51037606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 125
Target Start/End: Original strand, 19994310 - 19994375
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggtattt 125  Q
    ||||||||| |||||||| ||||||  || | ||||||||||||||||||||  || |||||||||    
T  19994310 tttcctcgggagttaactgcagtcgttttatgaattcctcggcagttaactgcagaaggggtattt 19994375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 179
Target Start/End: Complemental strand, 26932574 - 26932517
Alignment:
Q  122 atttgcgtaaattactcgtatggcacagccatactatatgtggtaacatcaattctct 179  Q
    ||||| |||| |||||||| || |||||||| ||||||||||| |||| |||||||||    
T  26932574 atttgagtaatttactcgtgtgacacagccaaactatatgtgggaacagcaattctct 26932517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 29700323 - 29700380
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagg 117  Q
    |||||||||||||||||| ||| ||| | || |||||||| |||||||||||| ||||    
T  29700323 tttcctcggcagttaactgcagccggttattgaattcctcagcagttaactgtcgagg 29700380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 111
Target Start/End: Original strand, 34154425 - 34154474
Alignment:
Q  62 tcctcggcagttaactacagtcggattttaaattcctcggcagttaactg 111  Q
    ||||| |||||||||| ||| ||| |||| ||||||||||||||||||||    
T  34154425 tcctctgcagttaactgcagccggttttttaattcctcggcagttaactg 34154474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 40352345 - 40352300
Alignment:
Q  133 ttactcgtatggcacagccatactatatgtggtaacatcaattctc 178  Q
    |||||||| ||||||| ||||||||||||||| |||| ||||||||    
T  40352345 ttactcgtgtggcacaaccatactatatgtgggaacaacaattctc 40352300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 1087830 - 1087794
Alignment:
Q  142 tggcacagccatactatatgtggtaacatcaattctc 178  Q
    ||||||||||||||||||||||| |||| ||||||||    
T  1087830 tggcacagccatactatatgtgggaacagcaattctc 1087794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 98 - 178
Target Start/End: Complemental strand, 7484744 - 7484665
Alignment:
Q  98 tcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactatatgtggtaacatcaattctc 178  Q
    ||||||||||||||  ||||||  |||||  |||||||||||| ||||| ||||| || | |||||| |||||||||||||    
T  7484744 tcggcagttaactgccgaggggc-atttggataaattactcgtgtggcatagccaaaccaaatgtgggaacatcaattctc 7484665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 60
Target Start/End: Complemental strand, 11494670 - 11494622
Alignment:
Q  12 gaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacat 60  Q
    |||||||||||||| ||| ||||||| |||||||||||  |||||||||    
T  11494670 gaaaatagtgtgtaagggaagcaggtggctgtttcatctcatgaaacat 11494622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 63 - 111
Target Start/End: Complemental strand, 37394297 - 37394249
Alignment:
Q  63 cctcggcagttaactacagtcggattttaaattcctcggcagttaactg 111  Q
    ||||||||||||||| ||  ||||||| |||||||||| ||||||||||    
T  37394297 cctcggcagttaactgcatccggatttcaaattcctcgacagttaactg 37394249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 8e-37; HSPs: 71)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 13 - 169
Target Start/End: Original strand, 8160942 - 8161100
Alignment:
Q  13 aaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacatttc-ctcggcagttaactacagtcggat-tttaaattcctcggcagttaact 110  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| | | ||| |   ||||  |||||||||||||||    
T  8160942 aaaatagtgtgtagggggagcaggtagctgtttcatcgtatgaaacatttctctcggcagttaactgccgccggttgcctaaaaacctcggcagttaact 8161041  T
Q  111 gttgagggggtatttgcgtaaattactcgtatggcacagccatactatatgtggtaaca 169  Q
    |  ||  |||||||||||||||||||| || ||||||||||||||||||||||| ||||    
T  8161042 gccgaaagggtatttgcgtaaattactggtgtggcacagccatactatatgtgggaaca 8161100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 9 - 125
Target Start/End: Complemental strand, 50953405 - 50953289
Alignment:
Q  9 gaagaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacatttcctcggcagttaactacagtcggattttaaattcctcggcagttaa 108  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||| ||| ||||||| ||||||||  ||||||||    
T  50953405 gaagaaaatagtgtgtagggggagcaggtggctgtttcatctgatgaaatatttcctcggcagttaactgcagccggatttcaaattcctatgcagttaa 50953306  T
Q  109 ctgttgagggggtattt 125  Q
    ||   ||||||||||||    
T  50953305 ctaccgagggggtattt 50953289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 9 - 122
Target Start/End: Original strand, 23443076 - 23443189
Alignment:
Q  9 gaagaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacatttcctcggcagttaactacagtcggattttaaattcctcggcagttaa 108  Q
    ||||||||||||||||||||||||||||| | ||||||||| |||||||||||  |||||||||||||| ||| |||| || ||||||||||||||||||    
T  23443076 gaagaaaatagtgtgtagggggagcaggtggttgtttcatctgatgaaacattctctcggcagttaactgcagccggaattcaaattcctcggcagttaa 23443175  T
Q  109 ctgttgagggggta 122  Q
    |||  |||||||||    
T  23443176 ctgccgagggggta 23443189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 60 - 169
Target Start/End: Complemental strand, 6740957 - 6740848
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactata 159  Q
    |||| ||||||||||| | ||| ||||||| |||||||||||||||||||||  ||||||||||||||||||||||||  | ||||||| ||||||||||    
T  6740957 tttcatcggcagttaatttcagccggatttcaaattcctcggcagttaactgccgagggggtatttgcgtaaattactgatttggcacaaccatactata 6740858  T
Q  160 tgtggtaaca 169  Q
    ||||| ||||    
T  6740857 tgtgggaaca 6740848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 30947600 - 30947667
Alignment:
Q  13 aaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacattt-cctcggcagttaactac 79  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  30947600 aaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacatttccctcggcagttaactac 30947667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 9 - 110
Target Start/End: Original strand, 2745175 - 2745276
Alignment:
Q  9 gaagaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacatttcctcggcagttaactacagtcggattttaaattcctcggcagttaa 108  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||   ||||| ||||||||| ||| || |||| ||||||||| ||||||||    
T  2745175 gaagaaaatagtgtgtagggggagcaggtggctgtttcatctgatgaaacagaccctcgacagttaactgcagccgaatttcaaattcctcagcagttaa 2745274  T
Q  109 ct 110  Q
    ||    
T  2745275 ct 2745276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 14398664 - 14398596
Alignment:
Q  9 gaagaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacatttcctcggcagttaact 77  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||    
T  14398664 gaagaaaatagtgtgtagggggagcaggtggctgtttcatctgatgaaacatttcctcgacagttaact 14398596  T

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Target: chr3; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 48250813 - 48250881
Alignment:
Q  9 gaagaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacatttcctcggcagttaact 77  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||    
T  48250813 gaagaaaatagtgtgtagggggagcaggtggctgtttcatctgatgaaacattttctcggcagttaact 48250881  T

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Target: chr3; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 13 - 79
Target Start/End: Complemental strand, 3948855 - 3948788
Alignment:
Q  13 aaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacattt-cctcggcagttaactac 79  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  3948855 aaaatagtgtgtagggggagcaggtagcagtttcatcggatgaaacatttccctcggcagttaactac 3948788  T

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Target: chr3; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 9429792 - 9429863
Alignment:
Q  9 gaagaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaaca-tttcctcggcagttaactac 79  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  9429792 gaagaaaacagtgtgtagggggagcaggtagttgtttcatcggatgaaacattttcctcggcagttaactac 9429863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 13747662 - 13747733
Alignment:
Q  9 gaagaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaaca-tttcctcggcagttaactac 79  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  13747662 gaagaaaatagagtgtagggggagcaggtggctgtttcatcggatgaaacattttcctcggcagttaactac 13747733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 36817466 - 36817535
Alignment:
Q  9 gaagaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacatttcctcggcagttaactac 79  Q
    ||||||||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  36817466 gaagaaaatagtgtgtagggg-agcaggtggctgtttcatccgatgaaacatttcctcggcagttaactac 36817535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 60 - 180
Target Start/End: Complemental strand, 2743450 - 2743330
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactata 159  Q
    |||||||||||||||||| ||| ||||||| |||||||||||||||||||||  |||||| |||||| |||| ||||| || |  | |||||| || | |    
T  2743450 tttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgaggggatatttgggtaatttacttgtgtttctcagccaaacaaca 2743351  T
Q  160 tgtggtaacatcaattctctt 180  Q
    ||||| |||| ||||||||||    
T  2743350 tgtgggaacaacaattctctt 2743330  T

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Target: chr3; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 12 - 119
Target Start/End: Original strand, 6505922 - 6506031
Alignment:
Q  12 gaaaatagtgtgtaggggg-agcaggtagctgtttcatcggatgaaacat-ttcctcggcagttaactacagtcggattttaaattcctcggcagttaac 109  Q
    ||||||||| ||||||||| |||| || ||||||||||| |||||||||| ||||||||||||||||| ||| ||| || | ||||||| ||||||||||    
T  6505922 gaaaatagtatgtaggggggagcatgtggctgtttcatctgatgaaacatattcctcggcagttaactgcagccggtttcttaattccttggcagttaac 6506021  T
Q  110 tgttgagggg 119  Q
    |  |||||||    
T  6506022 ttctgagggg 6506031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 96 - 169
Target Start/End: Original strand, 30947711 - 30947784
Alignment:
Q  96 cctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactatatgtggtaaca 169  Q
    ||||||||||||||||  ||| |||||||||||||||||||| || ||||||| ||||||||||||||| ||||    
T  30947711 cctcggcagttaactgccgagagggtatttgcgtaaattactggtgtggcacaaccatactatatgtgggaaca 30947784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 60 - 181
Target Start/End: Original strand, 50957687 - 50957808
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactata 159  Q
    |||||||||||||||||| ||| ||||||| |||||||||||||| ||||||  |||||||||||||  ||| ||||| || |  | |||||| || | |    
T  50957687 tttcctcggcagttaactgcagccggatttcaaattcctcggcagctaactgcagagggggtatttggataatttacttgtgtttctcagccaaacaaca 50957786  T
Q  160 tgtggtaacatcaattctcttg 181  Q
    ||||| |||| |||||||||||    
T  50957787 tgtgggaacagcaattctcttg 50957808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 60 - 151
Target Start/End: Original strand, 14402991 - 14403082
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagcc 151  Q
    |||||||||||||||||||| | ||||||| |||||||||||||||||||||  ||||||| |   | ||||| ||||||| ||||||||||    
T  14402991 tttcctcggcagttaactaccgccggatttcaaattcctcggcagttaactgccgagggggcaaaagagtaaaatactcgtgtggcacagcc 14403082  T

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Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 60 - 186
Target Start/End: Original strand, 9429870 - 9429996
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactata 159  Q
    ||||||||| | |||||| ||| |  |||| |||||||||||||||||||||  |||||||||||||||||| ||||| || |  | |||||| ||   |    
T  9429870 tttcctcggtacttaactgcagccaaatttcaaattcctcggcagttaactgccgagggggtatttgcgtaatttacttgtgtttctcagccaaacacca 9429969  T
Q  160 tgtggtaacatcaattctcttgaaaat 186  Q
    ||||| |||| ||||||||||||||||    
T  9429970 tgtgggaacagcaattctcttgaaaat 9429996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 96 - 169
Target Start/End: Complemental strand, 3948744 - 3948671
Alignment:
Q  96 cctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactatatgtggtaaca 169  Q
    ||||||||||||||||  |||  ||||||||| ||||||||| || ||||||||||||||||||||||| ||||    
T  3948744 cctcggcagttaactgccgagaaggtatttgcataaattactggtgtggcacagccatactatatgtgggaaca 3948671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 77
Target Start/End: Original strand, 46993177 - 46993242
Alignment:
Q  12 gaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacatttcctcggcagttaact 77  Q
    ||||||| | |||| ||||||||||| ||||||||||| ||||||||||||||||| |||||||||    
T  46993177 gaaaataatatgtaaggggagcaggtggctgtttcatctgatgaaacatttcctcgacagttaact 46993242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 12 - 79
Target Start/End: Complemental strand, 7837722 - 7837654
Alignment:
Q  12 gaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacat-ttcctcggcagttaactac 79  Q
    ||||||||| ||||||||||||||||  |||||||||| |||||||||| |||||| ||||||||||||    
T  7837722 gaaaatagtatgtagggggagcaggtgactgtttcatctgatgaaacatattcctcagcagttaactac 7837654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 60 - 136
Target Start/End: Complemental strand, 13743345 - 13743270
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggtatttgcgtaaattac 136  Q
    |||||||||||||||||| ||| ||||||| |||||||||||||||||||||  || |||||||||| |||| ||||    
T  13743345 tttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccga-ggggtatttgggtaatttac 13743270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 60 - 179
Target Start/End: Complemental strand, 12897876 - 12897758
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactata 159  Q
    |||||||||||||||||| ||| || ||||  ||  | |||||||||||||| ||||||| |||||| |||| |||||||| ||||||||||| || | |    
T  12897876 tttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgctgagggg-tatttgagtaatttactcgtgtggcacagccaaaccaaa 12897778  T
Q  160 tgtggtaacatcaattctct 179  Q
     |||| |||| |||||||||    
T  12897777 agtgggaacaacaattctct 12897758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 29929553 - 29929486
Alignment:
Q  12 gaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacat-ttcctcggcagttaacta 78  Q
    ||||||||||||||||||||||||||  |||||||||  |||||||||| || |||||||||||||||    
T  29929553 gaaaatagtgtgtagggggagcaggtgactgtttcatatgatgaaacatatttctcggcagttaacta 29929486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 29978707 - 29978640
Alignment:
Q  12 gaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacat-ttcctcggcagttaacta 78  Q
    ||||||||||||||||||||||||||  |||||||||  |||||||||| || |||||||||||||||    
T  29978707 gaaaatagtgtgtagggggagcaggtgactgtttcatatgatgaaacatatttctcggcagttaacta 29978640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 60 - 111
Target Start/End: Complemental strand, 41137770 - 41137719
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactg 111  Q
    |||||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  41137770 tttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactg 41137719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 6740991 - 6740949
Alignment:
Q  9 gaagaaaatagtgtgtagggggagcaggtagctgtttcatcgg 51  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  6740991 gaagaaagtagtgtgtagggggagcaggtagctgtttcatcgg 6740949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 16444725 - 16444663
Alignment:
Q  9 gaagaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacatttcctcggcag 71  Q
    ||||||||||| ||||||||||||||||| ||||||||||| ||||||| || ||||| ||||    
T  16444725 gaagaaaatagagtgtagggggagcaggtggctgtttcatctgatgaaatatatcctcagcag 16444663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 76
Target Start/End: Original strand, 7842963 - 7843028
Alignment:
Q  12 gaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaaca-tttcctcggcagttaac 76  Q
    ||||||| |||||||| ||||||||| ||||||||||| ||||||||| ||||||||| |||||||    
T  7842963 gaaaataatgtgtaggaggagcaggtggctgtttcatccgatgaaacattttcctcggaagttaac 7843028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 79
Target Start/End: Original strand, 21956150 - 21956219
Alignment:
Q  11 agaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaaca-tttcctcggcagttaactac 79  Q
    |||||||||| ||||||||| ||||||  |||||||||| ||||||||| |||||||| |||||||||||    
T  21956150 agaaaatagtatgtagggggtgcaggtgactgtttcatctgatgaaacattttcctcgacagttaactac 21956219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 60 - 120
Target Start/End: Complemental strand, 42756211 - 42756151
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgaggggg 120  Q
    |||||||||||||||||| ||  |||||||| ||||||||| |||||||||| ||||||||    
T  42756211 tttcctcggcagttaactgcaaccggatttttaattcctcgacagttaactgctgaggggg 42756151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 59 - 111
Target Start/End: Original strand, 50216874 - 50216926
Alignment:
Q  59 atttcctcggcagttaactacagtcggattttaaattcctcggcagttaactg 111  Q
    |||| |||||||||||||| ||| |||||||| ||||||||||||||||||||    
T  50216874 attttctcggcagttaactgcagccggatttttaattcctcggcagttaactg 50216926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 60 - 178
Target Start/End: Complemental strand, 16851175 - 16851061
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactata 159  Q
    |||||||||||||||||||||| || |||| | | |  ||||||||||||||  ||||||  ||||| ||||||||||||| ||||| ||||| |||| |    
T  16851175 tttcctcggcagttaactacagccg-atttcataat--tcggcagttaactgccgaggggc-atttgagtaaattactcgtgtggcatagccaaactaaa 16851080  T
Q  160 tgtggtaacatcaattctc 178  Q
    ||||| |||| ||||||||    
T  16851079 tgtgggaacaacaattctc 16851061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 60 - 111
Target Start/End: Complemental strand, 41803050 - 41802999
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactg 111  Q
    |||||||||||||||||| ||| ||| |||||||||| ||||||||||||||    
T  41803050 tttcctcggcagttaactgcagccggtttttaaattcttcggcagttaactg 41802999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 46388937 - 46388890
Alignment:
Q  133 ttactcgtatggcacagccatactatatgtggtaacatcaattctctt 180  Q
    |||||||| ||||||||||||||||||||||| |||| ||||||||||    
T  46388937 ttactcgtgtggcacagccatactatatgtgggaacagcaattctctt 46388890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 178
Target Start/End: Original strand, 28817022 - 28817139
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactata 159  Q
    |||||||||||||||||| ||| || ||||  ||  | | ||||||||||||  |||||| |||||| |||| |||||||| ||||||||||| || | |    
T  28817022 tttcctcggcagttaactgcagccgtatttctaaaactttggcagttaactgccgagggg-tatttgagtaatttactcgtgtggcacagccaaaccaaa 28817120  T
Q  160 tgtggtaacatcaattctc 178  Q
     |||| |||||||||||||    
T  28817121 agtgggaacatcaattctc 28817139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 110
Target Start/End: Original strand, 30256024 - 30256074
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaact 110  Q
    |||||||||||||||||| ||| ||| |||| |||||||||||||||||||    
T  30256024 tttcctcggcagttaactgcagccggttttttaattcctcggcagttaact 30256074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 130
Target Start/End: Complemental strand, 48888792 - 48888723
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggtatttgcgta 130  Q
    |||||||||||||||||| ||| |||||||| ||||||||||||| ||||||  ||||||| |||| ||||    
T  48888792 tttcctcggcagttaactgcagccggatttttaattcctcggcag-taactgccgagggggcatttacgta 48888723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 110
Target Start/End: Original strand, 49219812 - 49219862
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaact 110  Q
    |||||||||||||||||| ||| |||||||  |||||||||||||||||||    
T  49219812 tttcctcggcagttaactgcagccggatttctaattcctcggcagttaact 49219862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 2968019 - 2968064
Alignment:
Q  133 ttactcgtatggcacagccatactatatgtggtaacatcaattctc 178  Q
    |||||||| ||||||||||||||||||||||| |||| ||||||||    
T  2968019 ttactcgtgtggcacagccatactatatgtgggaacagcaattctc 2968064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 29008865 - 29008820
Alignment:
Q  133 ttactcgtatggcacagccatactatatgtggtaacatcaattctc 178  Q
    |||||||| ||||||||||||||||||||||| |||| ||||||||    
T  29008865 ttactcgtgtggcacagccatactatatgtgggaacaacaattctc 29008820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 34045387 - 34045342
Alignment:
Q  133 ttactcgtatggcacagccatactatatgtggtaacatcaattctc 178  Q
    |||||||| ||||||||||||||||||||||| |||| ||||||||    
T  34045387 ttactcgtgtggcacagccatactatatgtgggaacagcaattctc 34045342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 117 - 178
Target Start/End: Complemental strand, 35743413 - 35743352
Alignment:
Q  117 ggggtatttgcgtaaattactcgtatggcacagccatactatatgtggtaacatcaattctc 178  Q
    |||| |||| ||||| |||||||| ||||||||||||||||||||| | |||| ||||||||    
T  35743413 ggggcatttccgtaacttactcgtgtggcacagccatactatatgtagcaacaacaattctc 35743352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 178
Target Start/End: Complemental strand, 1835140 - 1835084
Alignment:
Q  122 atttgcgtaaattactcgtatggcacagccatactatatgtggtaacatcaattctc 178  Q
    |||| ||||| |||||||| |||||||||||||| |||||||| |||| ||||||||    
T  1835140 atttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 1835084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 111
Target Start/End: Original strand, 7843037 - 7843089
Alignment:
Q  59 atttcctcggcagttaactacagtcggattttaaattcctcggcagttaactg 111  Q
    |||||||| |||||||||| |||||||| || ||||| |||||||||||||||    
T  7843037 atttcctctgcagttaactgcagtcggaattcaaatttctcggcagttaactg 7843089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 9582595 - 9582547
Alignment:
Q  64 ctcggcagttaactacagtcggattttaaattcctcggcagttaactgt 112  Q
    |||||||||||||| ||||||| |||| |||| ||||||||||||||||    
T  9582595 ctcggcagttaactgcagtcggtttttgaatttctcggcagttaactgt 9582547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 178
Target Start/End: Original strand, 12898746 - 12898825
Alignment:
Q  98 tcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactatatgtggtaacatcaattctc 178  Q
    ||||||||||||||| ||||||  ||||| ||||||||||||| ||||| ||||| || | |||||| |||| ||||||||    
T  12898746 tcggcagttaactgtcgaggggc-atttgggtaaattactcgtgtggcatagccaaaccaaatgtgggaacagcaattctc 12898825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 120
Target Start/End: Original strand, 20918032 - 20918092
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgaggggg 120  Q
    ||||||||||||||||||  || |||||||| ||||| ||||||||||| ||| |||||||    
T  20918032 tttcctcggcagttaactgtagccggatttttaattcatcggcagttaattgtcgaggggg 20918092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 120
Target Start/End: Original strand, 20926994 - 20927054
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgaggggg 120  Q
    ||||||||||||||||||  || |||||||| ||||| ||||||||||| ||| |||||||    
T  20926994 tttcctcggcagttaactgtagccggatttttaattcatcggcagttaattgtcgaggggg 20927054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 120
Target Start/End: Original strand, 28611121 - 28611181
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgaggggg 120  Q
    |||||||||||||||||| ||| ||| |||| |||| |||||||||||||||  |||||||    
T  28611121 tttcctcggcagttaactgcagccggtttttgaatttctcggcagttaactgccgaggggg 28611181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 140
Target Start/End: Original strand, 34694459 - 34694535
Alignment:
Q  64 ctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggtatttgcgtaaattactcgt 140  Q
    |||||||||| ||| ||| |||||||  ||||||||| ||||||||||  ||||||| ||||  |||||||||||||    
T  34694459 ctcggcagtttactgcagccggatttctaattcctcgacagttaactgccgagggggcatttaggtaaattactcgt 34694535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 120
Target Start/End: Original strand, 48250890 - 48250950
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgaggggg 120  Q
    |||||||||||||||||| ||| |||| || ||||||||| |||||||||||  |||||||    
T  48250890 tttcctcggcagttaactgcagccggaattcaaattcctcagcagttaactgccgaggggg 48250950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 60 - 111
Target Start/End: Original strand, 4002526 - 4002577
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactg 111  Q
    |||||||||||||||||| ||| ||||||| ||||||||| | |||||||||    
T  4002526 tttcctcggcagttaactgcagccggatttcaaattcctcagtagttaactg 4002577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 60 - 111
Target Start/End: Original strand, 13747739 - 13747790
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactg 111  Q
    ||||||| |||||||||| ||| ||||||| |||||| ||||||||||||||    
T  13747739 tttcctcagcagttaactgcagccggatttcaaattcatcggcagttaactg 13747790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 60 - 111
Target Start/End: Original strand, 19341615 - 19341666
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactg 111  Q
    ||||||||| |||||||| ||| |||||||  ||||||||||||||||||||    
T  19341615 tttcctcggtagttaactgcagccggatttctaattcctcggcagttaactg 19341666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 29918287 - 29918354
Alignment:
Q  12 gaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacat-ttcctcggcagttaacta 78  Q
    ||||||||||||||||||||||||||  |||||||||  ||  |||||| || |||||||||||||||    
T  29918287 gaaaatagtgtgtagggggagcaggtgactgtttcatatgagaaaacatatttctcggcagttaacta 29918354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 29967440 - 29967507
Alignment:
Q  12 gaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacat-ttcctcggcagttaacta 78  Q
    ||||||||||||||||||||||||||  |||||||||  ||  |||||| || |||||||||||||||    
T  29967440 gaaaatagtgtgtagggggagcaggtgactgtttcatatgagaaaacatatttctcggcagttaacta 29967507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 60 - 111
Target Start/End: Complemental strand, 34691677 - 34691626
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactg 111  Q
    |||||||| ||||||||| ||| |||||||| | ||||||||||||||||||    
T  34691677 tttcctcgacagttaactgcagccggatttttatttcctcggcagttaactg 34691626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 59 - 122
Target Start/End: Original strand, 36817541 - 36817604
Alignment:
Q  59 atttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggta 122  Q
    |||||||||  |||||||| ||| |||| || ||||||||||| ||||||||| ||||||||||    
T  36817541 atttcctcgatagttaactgcagccggagttcaaattcctcggtagttaactgctgagggggta 36817604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 42904276 - 42904323
Alignment:
Q  133 ttactcgtatggcacagccatactatatgtggtaacatcaattctctt 180  Q
    ||||| || ||||||||||||||||||||||| |||| ||||||||||    
T  42904276 ttactggtgtggcacagccatactatatgtgggaacagcaattctctt 42904323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 109
Target Start/End: Complemental strand, 14398584 - 14398538
Alignment:
Q  63 cctcggcagttaactacagtcggattttaaattcctcggcagttaac 109  Q
    ||||||||||||||| ||| |||| || |||||||||||||||||||    
T  14398584 cctcggcagttaactgcagccggaattcaaattcctcggcagttaac 14398538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 60 - 178
Target Start/End: Original strand, 27739588 - 27739705
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactata 159  Q
    |||||||||||||||||| ||| || ||||  ||  | ||||||||||||||  || ||| |||||| |||| |||||||| ||||||||||| || | |    
T  27739588 tttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaaggg-tatttgagtaatttactcgtgtggcacagccaaaccaaa 27739686  T
Q  160 tgtggtaacatcaattctc 178  Q
     |||| |||| ||||||||    
T  27739687 agtgggaacaacaattctc 27739705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 133 - 179
Target Start/End: Original strand, 34051440 - 34051486
Alignment:
Q  133 ttactcgtatggcacagccatactatatgtggtaacatcaattctct 179  Q
    |||||||| ||||||||||| ||||||||||| |||| |||||||||    
T  34051440 ttactcgtgtggcacagccaaactatatgtgggaacagcaattctct 34051486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 133 - 183
Target Start/End: Original strand, 49144550 - 49144600
Alignment:
Q  133 ttactcgtatggcacagccatactatatgtggtaacatcaattctcttgaa 183  Q
    |||||||| || |||||||||||||||||||| |||| |||||||| ||||    
T  49144550 ttactcgtgtgacacagccatactatatgtgggaacagcaattctcgtgaa 49144600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 60 - 178
Target Start/End: Original strand, 50998701 - 50998818
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactata 159  Q
    |||| ||||||||||||| ||| |||||||  ||  | ||||||||||||||  ||||||  ||||| |||| |||||||| ||||||||||| || | |    
T  50998701 tttcttcggcagttaactgcagccggatttataaaacttcggcagttaactgccgaggggc-atttgagtaatttactcgtgtggcacagccaaaccaaa 50998799  T
Q  160 tgtggtaacatcaattctc 178  Q
    || || |||| ||||||||    
T  50998800 tgcgggaacaacaattctc 50998818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 16444587 - 16444542
Alignment:
Q  133 ttactcgtatggcacagccatactatatgtggtaacatcaattctc 178  Q
    |||||||| ||||||| ||||||||||||||| |||| ||||||||    
T  16444587 ttactcgtgtggcacaaccatactatatgtgggaacagcaattctc 16444542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 46702119 - 46702164
Alignment:
Q  133 ttactcgtatggcacagccatactatatgtggtaacatcaattctc 178  Q
    |||||||| ||||||| ||||||||||||||| |||| ||||||||    
T  46702119 ttactcgtgtggcacaaccatactatatgtgggaacagcaattctc 46702164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 60 - 120
Target Start/End: Original strand, 7247881 - 7247941
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgaggggg 120  Q
    |||||||| ||||||||| ||| ||| | || ||||||||||||||||||||  |||||||    
T  7247881 tttcctcgtcagttaactgcagccggttattgaattcctcggcagttaactgccgaggggg 7247941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 98 - 154
Target Start/End: Complemental strand, 26245349 - 26245294
Alignment:
Q  98 tcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccata 154  Q
    ||||||||||||||  |||||| |||||| |||| |||||||| |||||||||||||    
T  26245349 tcggcagttaactgccgagggg-tatttgagtaatttactcgtgtggcacagccata 26245294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 178
Target Start/End: Original strand, 41844447 - 41844503
Alignment:
Q  122 atttgcgtaaattactcgtatggcacagccatactatatgtggtaacatcaattctc 178  Q
    |||| ||||| |||||||| |||||||||||||| |||||| | |||| ||||||||    
T  41844447 atttccgtaacttactcgtgtggcacagccataccatatgtaggaacaacaattctc 41844503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 60 - 120
Target Start/End: Complemental strand, 46344989 - 46344929
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgaggggg 120  Q
    |||||||||||||||||| ||| ||  |||| ||||||||| ||||||||||  |||||||    
T  46344989 tttcctcggcagttaactgcagccgatttttgaattcctcgacagttaactgccgaggggg 46344929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 74; Significance: 8e-34; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 9 - 122
Target Start/End: Complemental strand, 11404 - 11291
Alignment:
Q  9 gaagaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacatttcctcggcagttaactacagtcggattttaaattcctcggcagttaa 108  Q
    |||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||| |||||||| ||| |||| || ||||||||||||||||||    
T  11404 gaagaaaatagtatgtagggggagcaggtggctgtttcatctgatgaaacatttcctcggaagttaactgcagccggaattcaaattcctcggcagttaa 11305  T
Q  109 ctgttgagggggta 122  Q
    |||  |||||||||    
T  11304 ctgccgagggggta 11291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 60 - 148
Target Start/End: Original strand, 15976 - 16064
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcaca 148  Q
    |||||||||||||||||| |||  |||||| |||||||||||||||||||||  ||||| | |  || ||||| ||||||| |||||||    
T  15976 tttcctcggcagttaactgcagctggatttcaaattcctcggcagttaactgccgagggagcaaatgagtaaaatactcgtgtggcaca 16064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0744 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0744
Description:

Target: scaffold0744; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 367 - 437
Alignment:
Q  9 gaagaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacatttcctcggcagttaactac 79  Q
    |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  367 gaagaaaatagtgtgtagggggagcaagtagctgtttcatctgatgaaacatttcctcggcagttaactac 437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 63; Significance: 3e-27; HSPs: 2)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 986 - 916
Alignment:
Q  9 gaagaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacatttcctcggcagttaactac 79  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  986 gaagaaaatagtgtgtagggggagcaggtggctgtttcatctgatgaaacatttcctcggcagttaactac 916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 60 - 179
Target Start/End: Complemental strand, 883 - 764
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactata 159  Q
    |||||||||||||||||||||| || |||| |||||||| ||||||||||||  |||||||||    ||||  ||||| || |||||||||| ||  | |    
T  883 tttcctcggcagttaactacagccgaatttcaaattcctaggcagttaactgccgagggggtaaaatcgtattttactggtgtggcacagccttatcaca 784  T
Q  160 tgtggtaacatcaattctct 179  Q
    ||||| |||| |||||||||    
T  783 tgtgggaacagcaattctct 764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 50177 - 50106
Alignment:
Q  9 gaagaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaaca-tttcctcggcagttaactac 79  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||    
T  50177 gaagaaaatagtgtgtagggggagcaggtagctgtttcatcaaatgaaacattttcctcggcagttaactac 50106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 54; Significance: 7e-22; HSPs: 2)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 10 - 79
Target Start/End: Original strand, 4345 - 4414
Alignment:
Q  10 aagaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacatttcctcggcagttaactac 79  Q
    ||||||||||| |||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||    
T  4345 aagaaaatagtttgtagggggagcaggtggttgtttcatctgatgaaacatttcctcggcagttaactac 4414  T

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Target: scaffold0361; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 111
Target Start/End: Original strand, 4420 - 4472
Alignment:
Q  59 atttcctcggcagttaactacagtcggattttaaattcctcggcagttaactg 111  Q
    |||||||||| | |||||| ||| |||| || |||||||||||||||||||||    
T  4420 atttcctcggtatttaactgcagccggagttcaaattcctcggcagttaactg 4472  T

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Target: scaffold0219 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 12 - 112
Target Start/End: Complemental strand, 15804 - 15703
Alignment:
Q  12 gaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacat-ttcctcggcagttaactacagtcggattttaaattcctcggcagttaact 110  Q
    ||||||||| ||||||||||||||||  |||||||||| |||||||||| ||||||||||||||||| ||  ||| |||| ||||||||| |||||||||    
T  15804 gaaaatagtatgtagggggagcaggtgactgtttcatctgatgaaacatattcctcggcagttaactgcaaccggtttttgaattcctcgacagttaact 15705  T
Q  111 gt 112  Q
    ||    
T  15704 gt 15703  T

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Target: scaffold0341 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 17296 - 17365
Alignment:
Q  9 gaagaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacatttcctcggcagttaactac 79  Q
    |||||||||||||| ||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  17296 gaagaaaatagtgt-tagagggagcaggtggctgtttcatctgatgaaacatttcctcggcagttaactac 17365  T

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Target: scaffold0341; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 59 - 122
Target Start/End: Original strand, 17371 - 17434
Alignment:
Q  59 atttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggta 122  Q
    ||||||||||||||||||| ||| ||||||| |||||||||||||||||||||  |||||||||    
T  17371 atttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgagggggta 17434  T

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Target: scaffold0794 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0794
Description:

Target: scaffold0794; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 12 - 79
Target Start/End: Complemental strand, 5398 - 5330
Alignment:
Q  12 gaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaaca-tttcctcggcagttaactac 79  Q
    ||||||||| |||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||    
T  5398 gaaaatagtatgtagggggagcaggtggctgtttcatctgatgaaacattttcctcggcagttaactac 5330  T

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Target: scaffold2089 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold2089
Description:

Target: scaffold2089; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 77
Target Start/End: Original strand, 287 - 351
Alignment:
Q  14 aaatagtgtgtagggg-gagcaggtagctgtttcatcggatgaaacatttcctcggcagttaact 77  Q
    |||||||||||||||| |||||||| ||||||||||| ||||||||||||||||| |||||||||    
T  287 aaatagtgtgtaggggggagcaggtggctgtttcatctgatgaaacatttcctcgacagttaact 351  T

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Target: scaffold0012 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 60 - 111
Target Start/End: Complemental strand, 232600 - 232549
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactg 111  Q
    |||||||||||||||||| |||||||||||| ||||||||| ||||||||||    
T  232600 tttcctcggcagttaactgcagtcggatttttaattcctcgacagttaactg 232549  T

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Target: scaffold0184 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 59 - 179
Target Start/End: Complemental strand, 18084 - 17964
Alignment:
Q  59 atttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactat 158  Q
    |||| |||||||||||||| ||| ||| |||  ||||||||||||||||||||| ||||||| |    |||||||||||||| || |||| |  ||  |     
T  18084 atttactcggcagttaactgcagccgggtttctaattcctcggcagttaactgtcgagggggcaaaaacgtaaattactcgtgtgccacaactttatcaa 17985  T
Q  159 atgtggtaacatcaattctct 179  Q
    |||||| ||||||||||||||    
T  17984 atgtgggaacatcaattctct 17964  T

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Target: scaffold0078 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 59 - 179
Target Start/End: Original strand, 54760 - 54880
Alignment:
Q  59 atttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactat 158  Q
    |||| |||||||||||||| ||| ||| |||  ||||||||||||||||||||| ||||||| |    |||||||||||||| || |||| |  ||  |     
T  54760 atttactcggcagttaactgcagccgggtttctaattcctcggcagttaactgtcgagggggcaaaaacgtaaattactcgtgtgccacaactttatcaa 54859  T
Q  159 atgtggtaacatcaattctct 179  Q
    |||||| ||||||||||||||    
T  54860 atgtgggaacatcaattctct 54880  T

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Target: scaffold0101 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 41150 - 41195
Alignment:
Q  133 ttactcgtatggcacagccatactatatgtggtaacatcaattctc 178  Q
    |||||||| ||||||||||||||||||||||| |||| ||||||||    
T  41150 ttactcgtgtggcacagccatactatatgtgggaacagcaattctc 41195  T

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Target: scaffold0016 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 69280 - 69360
Alignment:
Q  98 tcggcagttaactgttgagggggtatttgcgtaaattactcgtatggcacagccatactatatgtggtaacatcaattctct 179  Q
    ||||||||||||||  |||||| |||||| |||| |||||||| ||||||||||| || | | |||| ||||||||||||||    
T  69280 tcggcagttaactgccgagggg-tatttgagtaatttactcgtgtggcacagccaaaccaaaagtgggaacatcaattctct 69360  T

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Target: scaffold0201 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 120
Target Start/End: Complemental strand, 22455 - 22395
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcagttaactgttgaggggg 120  Q
    ||||||| |||||||||| ||| || |||| |||||||||||||||||||||  |||||||    
T  22455 tttcctcagcagttaactgcagccgaatttcaaattcctcggcagttaactgccgaggggg 22395  T

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Target: scaffold0147 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 807 - 855
Alignment:
Q  12 gaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacat 60  Q
    |||||||||||||||||||||||||   |||||||||| ||||||||||    
T  807 gaaaatagtgtgtagggggagcaggggactgtttcatctgatgaaacat 855  T

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Target: scaffold1606 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1606
Description:

Target: scaffold1606; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 55 - 100
Alignment:
Q  133 ttactcgtatggcacagccatactatatgtggtaacatcaattctc 178  Q
    |||||||| ||||||||||| ||||||||||| |||| ||||||||    
T  55 ttactcgtgtggcacagccaaactatatgtgggaacaacaattctc 100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 84526 - 84481
Alignment:
Q  133 ttactcgtatggcacagccatactatatgtggtaacatcaattctc 178  Q
    |||||||| ||||||||||| ||||||||||| |||| ||||||||    
T  84526 ttactcgtgtggcacagccaaactatatgtgggaacagcaattctc 84481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 77
Target Start/End: Original strand, 1141 - 1193
Alignment:
Q  26 gggggagcaggtagctgtttcatcggatgaaacat-ttcctcggcagttaact 77  Q
    ||||||||| || ||| ||||||| |||||||||| |||||||||||||||||    
T  1141 gggggagcatgtggctatttcatctgatgaaacatattcctcggcagttaact 1193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 60 - 104
Target Start/End: Original strand, 1678 - 1722
Alignment:
Q  60 tttcctcggcagttaactacagtcggattttaaattcctcggcag 104  Q
    ||||||| |||||||||| ||||||| |||| |||||||||||||    
T  1678 tttcctcagcagttaactgcagtcggtttttgaattcctcggcag 1722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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