View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0320_low_7 (Length: 344)

Name: NF0320_low_7
Description: NF0320
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0320_low_7
NF0320_low_7
[»] chr5 (53 HSPs)
chr5 (30-294)||(38834645-38834892)
chr5 (109-257)||(31588291-31588437)
chr5 (99-256)||(87196-87350)
chr5 (98-257)||(18999574-18999730)
chr5 (109-219)||(3935639-3935750)
chr5 (99-257)||(8648000-8648155)
chr5 (98-257)||(30415418-30415573)
chr5 (98-218)||(18339108-18339229)
chr5 (128-256)||(8750324-8750449)
chr5 (109-256)||(16284275-16284419)
chr5 (109-257)||(31176507-31176652)
chr5 (109-216)||(3406805-3406913)
chr5 (98-216)||(13987319-13987439)
chr5 (149-257)||(18999366-18999470)
chr5 (99-258)||(35373453-35373603)
chr5 (100-213)||(3406499-3406613)
chr5 (98-264)||(15978382-15978544)
chr5 (165-257)||(87019-87107)
chr5 (117-201)||(35383292-35383377)
chr5 (173-257)||(22231170-22231250)
chr5 (173-257)||(119184-119264)
chr5 (109-216)||(1650041-1650152)
chr5 (174-257)||(18340661-18340740)
chr5 (173-257)||(39402212-39402291)
chr5 (173-264)||(3191791-3191877)
chr5 (173-259)||(21949398-21949479)
chr5 (173-212)||(21949841-21949880)
chr5 (165-257)||(4187838-4187926)
chr5 (173-211)||(5747202-5747240)
chr5 (173-211)||(6543456-6543494)
chr5 (174-257)||(8750010-8750089)
chr5 (151-209)||(14626077-14626135)
chr5 (173-257)||(19353079-19353159)
chr5 (173-211)||(28641602-28641640)
chr5 (173-257)||(31093437-31093516)
chr5 (173-211)||(31162462-31162500)
chr5 (175-256)||(20892557-20892633)
chr5 (175-216)||(37813412-37813453)
chr5 (173-217)||(119794-119838)
chr5 (123-192)||(3935451-3935518)
chr5 (173-217)||(4186790-4186834)
chr5 (173-217)||(19352507-19352551)
chr5 (175-219)||(30351716-30351760)
chr5 (109-187)||(29751724-29751802)
chr5 (109-187)||(29752390-29752468)
chr5 (173-211)||(3192241-3192279)
chr5 (173-211)||(6543856-6543894)
chr5 (173-211)||(28641202-28641240)
chr5 (100-137)||(18339409-18339446)
chr5 (173-209)||(119054-119090)
chr5 (173-209)||(119968-120004)
chr5 (173-209)||(3406695-3406731)
chr5 (165-209)||(19353240-19353284)
[»] chr4 (61 HSPs)
chr4 (98-257)||(51906753-51906909)
chr4 (98-257)||(29691525-29691681)
chr4 (98-256)||(3296544-3296700)
chr4 (98-257)||(51906420-51906576)
chr4 (98-257)||(3296878-3297034)
chr4 (98-216)||(30608282-30608401)
chr4 (100-257)||(48553896-48554050)
chr4 (119-258)||(35166821-35166957)
chr4 (109-216)||(34129245-34129353)
chr4 (125-257)||(7118125-7118254)
chr4 (98-265)||(29691846-29692011)
chr4 (118-217)||(30608587-30608687)
chr4 (98-212)||(26168034-26168148)
chr4 (109-218)||(30047961-30048071)
chr4 (109-218)||(30062302-30062412)
chr4 (109-218)||(56106406-56106516)
chr4 (109-213)||(30952946-30953051)
chr4 (122-257)||(41510068-41510200)
chr4 (118-217)||(1791184-1791284)
chr4 (99-218)||(1791483-1791603)
chr4 (98-216)||(48760049-48760168)
chr4 (121-218)||(34129029-34129127)
chr4 (98-216)||(5544821-5544940)
chr4 (150-217)||(38759740-38759807)
chr4 (173-257)||(54142325-54142405)
chr4 (152-217)||(26984180-26984245)
chr4 (173-258)||(10580039-10580120)
chr4 (173-257)||(17288383-17288463)
chr4 (154-211)||(12108280-12108337)
chr4 (149-256)||(26168378-26168483)
chr4 (173-217)||(54143511-54143555)
chr4 (177-258)||(1791389-1791466)
chr4 (97-216)||(25916969-25917091)
chr4 (173-212)||(40841502-40841541)
chr4 (173-212)||(40841903-40841942)
chr4 (173-212)||(55347979-55348018)
chr4 (173-211)||(2669048-2669086)
chr4 (173-211)||(2669448-2669486)
chr4 (173-211)||(12922683-12922721)
chr4 (173-211)||(28957752-28957790)
chr4 (174-216)||(34294488-34294529)
chr4 (173-211)||(38026117-38026155)
chr4 (173-257)||(43979999-43980078)
chr4 (173-257)||(54167494-54167574)
chr4 (117-215)||(35469016-35469115)
chr4 (174-209)||(21235472-21235507)
chr4 (173-211)||(28505250-28505288)
chr4 (173-211)||(28957352-28957390)
chr4 (173-211)||(31227920-31227958)
chr4 (173-211)||(31228320-31228358)
chr4 (122-256)||(48759813-48759942)
chr4 (173-257)||(54168833-54168913)
chr4 (173-211)||(55347602-55347640)
chr4 (224-257)||(1791321-1791354)
chr4 (99-179)||(5545119-5545199)
chr4 (175-257)||(1317504-1317581)
chr4 (177-217)||(3296753-3296793)
chr4 (225-257)||(19310787-19310819)
chr4 (173-209)||(21235071-21235107)
chr4 (177-217)||(35166708-35166748)
chr4 (173-209)||(47053805-47053841)
[»] chr3 (46 HSPs)
chr3 (98-257)||(9218448-9218603)
chr3 (98-217)||(9217856-9217976)
chr3 (102-257)||(22814296-22814448)
chr3 (98-216)||(44504129-44504248)
chr3 (101-257)||(26741241-26741390)
chr3 (98-257)||(43933440-43933596)
chr3 (98-214)||(27013448-27013565)
chr3 (109-257)||(51471335-51471480)
chr3 (109-257)||(25770321-25770466)
chr3 (149-257)||(13637766-13637870)
chr3 (149-257)||(44504372-44504476)
chr3 (118-253)||(50732229-50732361)
chr3 (118-253)||(50780494-50780626)
chr3 (152-217)||(51755903-51755968)
chr3 (166-257)||(132062-132149)
chr3 (100-254)||(37172084-37172235)
chr3 (119-257)||(37172431-37172566)
chr3 (120-257)||(34743426-34743560)
chr3 (149-256)||(43933714-43933816)
chr3 (110-217)||(38485733-38485840)
chr3 (147-219)||(33225522-33225594)
chr3 (173-258)||(25770493-25770574)
chr3 (181-257)||(45728335-45728407)
chr3 (173-257)||(48868597-48868677)
chr3 (173-257)||(4199896-4199975)
chr3 (98-198)||(13637530-13637631)
chr3 (175-255)||(25770728-25770804)
chr3 (173-212)||(45539249-45539288)
chr3 (173-212)||(45539650-45539689)
chr3 (173-257)||(27475390-27475469)
chr3 (173-257)||(34949756-34949835)
chr3 (173-211)||(36899295-36899333)
chr3 (173-211)||(36899695-36899733)
chr3 (173-211)||(42606321-42606359)
chr3 (173-211)||(46689723-46689761)
chr3 (175-217)||(54588493-54588535)
chr3 (178-256)||(27013583-27013657)
chr3 (147-256)||(33226906-33227011)
chr3 (173-257)||(48867650-48867730)
chr3 (173-211)||(2388673-2388711)
chr3 (173-211)||(2389073-2389111)
chr3 (173-257)||(22407284-22407363)
chr3 (173-211)||(42606721-42606759)
chr3 (173-211)||(46690123-46690161)
chr3 (173-209)||(20826772-20826808)
chr3 (173-209)||(20831111-20831147)
[»] chr7 (38 HSPs)
chr7 (98-249)||(22948812-22948960)
chr7 (98-264)||(32092221-32092384)
chr7 (118-255)||(11974666-11974800)
chr7 (98-218)||(20543946-20544067)
chr7 (98-257)||(18152756-18152912)
chr7 (98-256)||(28838356-28838508)
chr7 (118-257)||(17075571-17075707)
chr7 (109-256)||(44803577-44803721)
chr7 (98-257)||(17075219-17075375)
chr7 (118-257)||(28852693-28852829)
chr7 (109-257)||(10466724-10466869)
chr7 (98-256)||(5029688-5029842)
chr7 (153-218)||(42750108-42750173)
chr7 (124-219)||(11975023-11975119)
chr7 (98-216)||(20544245-20544363)
chr7 (109-190)||(23548670-23548752)
chr7 (140-205)||(32092505-32092571)
chr7 (160-218)||(6621113-6621170)
chr7 (173-257)||(18443619-18443698)
chr7 (147-257)||(12933045-12933151)
chr7 (109-197)||(44803382-44803471)
chr7 (149-212)||(28854718-28854781)
chr7 (175-217)||(27311060-27311102)
chr7 (173-257)||(30939574-30939654)
chr7 (109-217)||(49053825-49053935)
chr7 (173-213)||(27310087-27310127)
chr7 (173-257)||(1244453-1244532)
chr7 (173-257)||(28898029-28898108)
chr7 (173-257)||(41298686-41298765)
chr7 (173-260)||(18443173-18443255)
chr7 (175-212)||(33848309-33848346)
chr7 (173-217)||(16755643-16755687)
chr7 (175-257)||(29783935-29784012)
chr7 (159-209)||(12908425-12908475)
chr7 (173-211)||(22954087-22954125)
chr7 (173-211)||(33847907-33847945)
chr7 (173-217)||(10466651-10466695)
chr7 (173-217)||(11992750-11992794)
[»] chr2 (45 HSPs)
chr2 (99-257)||(21267303-21267458)
chr2 (99-257)||(21182307-21182462)
chr2 (98-257)||(2517413-2517569)
chr2 (98-257)||(2191217-2191373)
chr2 (98-257)||(3691323-3691479)
chr2 (98-257)||(21217255-21217411)
chr2 (98-257)||(21264991-21265147)
chr2 (109-257)||(32114166-32114310)
chr2 (118-257)||(21216923-21217059)
chr2 (118-257)||(21265343-21265479)
chr2 (100-257)||(24093156-24093310)
chr2 (99-254)||(7083525-7083677)
chr2 (121-216)||(3691120-3691216)
chr2 (109-216)||(39729551-39729659)
chr2 (99-218)||(10706586-10706704)
chr2 (98-216)||(24093490-24093609)
chr2 (149-212)||(32114457-32114520)
chr2 (175-217)||(3624925-3624967)
chr2 (173-257)||(10709475-10709555)
chr2 (99-202)||(2606591-2606695)
chr2 (149-257)||(32860814-32860918)
chr2 (173-211)||(1804273-1804311)
chr2 (173-211)||(1804673-1804711)
chr2 (154-212)||(2036594-2036652)
chr2 (173-257)||(3854508-3854587)
chr2 (173-211)||(6476128-6476166)
chr2 (173-211)||(6476528-6476566)
chr2 (173-211)||(11451197-11451235)
chr2 (165-257)||(23222865-23222953)
chr2 (173-211)||(27377690-27377728)
chr2 (165-211)||(39096565-39096611)
chr2 (173-257)||(39947096-39947176)
chr2 (173-217)||(23221870-23221914)
chr2 (173-217)||(39945878-39945922)
chr2 (98-137)||(32861147-32861186)
chr2 (154-212)||(2035649-2035707)
chr2 (222-256)||(2606695-2606729)
chr2 (173-211)||(12090136-12090174)
chr2 (173-257)||(26525905-26525984)
chr2 (173-211)||(34037850-34037888)
chr2 (175-216)||(18105753-18105794)
chr2 (173-217)||(24093365-24093409)
chr2 (30-74)||(31357556-31357600)
chr2 (173-217)||(32861050-32861094)
chr2 (173-209)||(44934693-44934729)
[»] chr8 (36 HSPs)
chr8 (98-257)||(26997803-26997959)
chr8 (98-216)||(12489265-12489384)
chr8 (98-257)||(13315202-13315358)
chr8 (98-257)||(17915441-17915596)
chr8 (98-256)||(6297463-6297618)
chr8 (109-257)||(6297980-6298125)
chr8 (98-257)||(9800039-9800195)
chr8 (98-257)||(16662168-16662324)
chr8 (109-254)||(16662417-16662558)
chr8 (102-217)||(6297800-6297916)
chr8 (109-257)||(10047479-10047623)
chr8 (149-257)||(17914197-17914301)
chr8 (98-254)||(26243329-26243482)
chr8 (109-218)||(9800288-9800398)
chr8 (99-216)||(44024262-44024380)
chr8 (98-218)||(21006056-21006177)
chr8 (134-255)||(26720323-26720441)
chr8 (153-257)||(12489517-12489616)
chr8 (173-258)||(44024397-44024478)
chr8 (173-257)||(29917105-29917184)
chr8 (165-256)||(44148578-44148665)
chr8 (100-200)||(39234889-39234990)
chr8 (149-258)||(7344842-7344947)
chr8 (173-258)||(21005959-21006040)
chr8 (98-196)||(21005779-21005878)
chr8 (173-257)||(4624533-4624613)
chr8 (118-219)||(10047832-10047934)
chr8 (147-257)||(40304684-40304790)
chr8 (98-257)||(11089228-11089384)
chr8 (173-217)||(36155307-36155351)
chr8 (174-217)||(20682744-20682787)
chr8 (165-257)||(44803565-44803653)
chr8 (173-211)||(29917548-29917586)
chr8 (173-209)||(4694442-4694478)
chr8 (175-211)||(22601540-22601576)
chr8 (175-211)||(24846004-24846040)
[»] scaffold0009 (3 HSPs)
scaffold0009 (98-255)||(108056-108210)
scaffold0009 (98-257)||(107722-107878)
scaffold0009 (174-258)||(107894-107974)
[»] chr1 (43 HSPs)
chr1 (99-257)||(6751288-6751444)
chr1 (99-257)||(5172745-5172899)
chr1 (128-257)||(9880484-9880610)
chr1 (109-257)||(19895400-19895545)
chr1 (109-257)||(31436328-31436473)
chr1 (98-257)||(3591271-3591427)
chr1 (118-257)||(9880744-9880880)
chr1 (109-213)||(50359165-50359269)
chr1 (118-258)||(5683160-5683297)
chr1 (118-217)||(18180232-18180332)
chr1 (98-216)||(5683495-5683614)
chr1 (100-218)||(47541553-47541672)
chr1 (30-100)||(12389461-12389531)
chr1 (99-216)||(19895735-19895853)
chr1 (118-256)||(48155233-48155368)
chr1 (109-257)||(18179879-18180024)
chr1 (109-216)||(50359384-50359492)
chr1 (173-257)||(1500991-1501071)
chr1 (98-257)||(4288374-4288525)
chr1 (109-255)||(19976166-19976309)
chr1 (118-217)||(6751083-6751183)
chr1 (98-212)||(48155014-48155129)
chr1 (165-257)||(45664687-45664775)
chr1 (173-219)||(12869664-12869710)
chr1 (173-257)||(36793584-36793664)
chr1 (173-212)||(1500100-1500139)
chr1 (173-258)||(3591174-3591255)
chr1 (173-211)||(8997382-8997420)
chr1 (173-257)||(17968037-17968116)
chr1 (173-211)||(32266524-32266562)
chr1 (173-211)||(40124117-40124155)
chr1 (173-257)||(45230571-45230650)
chr1 (173-211)||(47410464-47410502)
chr1 (173-211)||(47410864-47410902)
chr1 (109-190)||(47541769-47541851)
chr1 (173-211)||(9122726-9122764)
chr1 (173-211)||(9123126-9123164)
chr1 (173-219)||(12868467-12868513)
chr1 (173-211)||(32266924-32266962)
chr1 (173-211)||(40124517-40124555)
chr1 (173-211)||(46802363-46802401)
chr1 (109-192)||(42723200-42723284)
chr1 (173-209)||(46802763-46802799)
[»] chr6 (28 HSPs)
chr6 (109-256)||(7645927-7646071)
chr6 (98-215)||(17157584-17157702)
chr6 (99-215)||(21113067-21113184)
chr6 (109-257)||(5974011-5974156)
chr6 (109-257)||(8710286-8710430)
chr6 (121-256)||(14712963-14713095)
chr6 (165-257)||(211441-211529)
chr6 (122-257)||(211679-211811)
chr6 (149-257)||(4510188-4510293)
chr6 (118-209)||(25932339-25932431)
chr6 (98-257)||(25932083-25932235)
chr6 (186-257)||(17157856-17157923)
chr6 (149-201)||(1869503-1869555)
chr6 (174-216)||(20522167-20522209)
chr6 (173-257)||(34984554-34984633)
chr6 (173-258)||(14712829-14712910)
chr6 (173-211)||(14257188-14257226)
chr6 (173-211)||(14257588-14257626)
chr6 (173-211)||(20824205-20824243)
chr6 (173-257)||(33107371-33107450)
chr6 (173-256)||(6162698-6162776)
chr6 (173-212)||(19595659-19595698)
chr6 (173-211)||(15147759-15147797)
chr6 (154-212)||(19579193-19579251)
chr6 (173-211)||(20824605-20824643)
chr6 (118-151)||(34527713-34527746)
chr6 (173-209)||(15148159-15148195)
chr6 (173-213)||(20521225-20521265)
[»] scaffold0063 (2 HSPs)
scaffold0063 (99-256)||(35127-35281)
scaffold0063 (121-255)||(34794-34925)
[»] scaffold0933 (1 HSPs)
scaffold0933 (118-257)||(491-627)
[»] scaffold0085 (2 HSPs)
scaffold0085 (173-211)||(39862-39900)
scaffold0085 (173-211)||(39462-39500)
[»] scaffold0148 (2 HSPs)
scaffold0148 (173-209)||(29318-29354)
scaffold0148 (173-209)||(33004-33040)


Alignment Details
Target: chr5 (Bit Score: 193; Significance: 1e-105; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 30 - 294
Target Start/End: Original strand, 38834645 - 38834892
Alignment:
Q  30 cccagtacaagcagatctccaaggtattgctagtaacatcaacattgaactttcttacggctttctaaccactaactagcacatcaatattccgttagag 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  38834645 cccagtacaagcagatctccaaggtattgctagtaacatcaacattgaactttcttacggctttataaccactaactagcacatcaatattccgttagag 38834744  T
Q  130 aattaacatcagagactaatttgataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaa 229  Q
    |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||                 ||||    
T  38834745 aattaacagcagagactaatttgataacagagatcaaatgtgtgaattttaaaaacatttaatgaaatgtagggactat-----------------gcaa 38834827  T
Q  230 aacgtaaggactaaaaacatatttaacctataaaattatcatagtggctcccttcaagaataatc 294  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  38834828 aacgtaaggactaaaaatatatttaacctataaaattatcatagtggctcccttcaagaataatc 38834892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 109 - 257
Target Start/End: Original strand, 31588291 - 31588437
Alignment:
Q  109 cacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggacta 207  Q
    |||||||  |||||||||||||||||||| ||| ||||||||| |||||| ||||| ||||||  |||||||||||| ||||||||||||||||||||||    
T  31588291 cacatcagcattccgttagagaattaacagcagggactaattttgataacggagataaaatgttaggattttaaaaatatttaatgaaatgtagggacta 31588390  T
Q  208 ttcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||||||||||   | |||||||| |||||||||||||||||||||||||    
T  31588391 ttcttcaaagg---ggacgcaaaatgtaaggactaaaaacatatttaacc 31588437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 99 - 256
Target Start/End: Original strand, 87196 - 87350
Alignment:
Q  99 cactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaat 197  Q
    ||||||||| |||||||| |||  ||||||||||||||| || |||||||||| |||||| ||||| ||||||| |||||||||||||||||||||||||    
T  87196 cactaactaccacatcaacattatgttagagaattaacaacaaagactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaat 87295  T
Q  198 gtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaac 256  Q
    ||||||||||||||||||||    | || |||||  |||||||||||||||||||||||    
T  87296 gtagggactattcttcaaag----ggacacaaaatataaggactaaaaacatatttaac 87350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 98 - 257
Target Start/End: Original strand, 18999574 - 18999730
Alignment:
Q  98 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 196  Q
    |||||||||  |||||||  |||||||||||||||||||| ||  || |||||| ||||||| |||| ||||||| |||||||||||| |||||||||||    
T  18999574 ccactaactgccacatcatcattccgttagagaattaacaacaatgattaattttgataacaaagataaaatgtgaggattttaaaaatatttaatgaaa 18999673  T
Q  197 tgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||| |||||||||||||||  || ||| |||||| |||||||||||||||||||||||||    
T  18999674 tgtatggactattcttcaaa--at-gaa-gcaaaatgtaaggactaaaaacatatttaacc 18999730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 109 - 219
Target Start/End: Original strand, 3935639 - 3935750
Alignment:
Q  109 cacatcaatattccgttagagaattaacatcagagactaatttga-taacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggacta 207  Q
    |||||||| ||| |||||||||||||||| ||||||||||||| | ||||| |||| ||||||| |||||||||||||| ||||||||||||||||| ||    
T  3935639 cacatcaacatttcgttagagaattaacagcagagactaattttaataacaaagataaaatgtgaggattttaaaaacaattaatgaaatgtagggatta 3935738  T
Q  208 ttcttcaaagga 219  Q
    ||||||||||||    
T  3935739 ttcttcaaagga 3935750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 99 - 257
Target Start/End: Original strand, 8648000 - 8648155
Alignment:
Q  99 cactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaat 197  Q
    ||||||||  |||||||| ||||||||| |||||||||| || |||||||||| |||||| ||||  ||||||| |||||||||||| ||||||||||||    
T  8648000 cactaactgccacatcaacattccgttaaagaattaacaacatagactaattttgataacggagaaaaaatgtgaggattttaaaaatatttaatgaaat 8648099  T
Q  198 gtagggactattctt-caaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||  |||||||||| ||||||     |||||||| ||||||||||||| |||||||||||    
T  8648100 gtaaagactattcttccaaagg-----acgcaaaatgtaaggactaaaatcatatttaacc 8648155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 98 - 257
Target Start/End: Original strand, 30415418 - 30415573
Alignment:
Q  98 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 196  Q
    |||||||||| |||||||  |||||||| ||||||||||| | ||| ||||||| |||||| ||||  ||||||| |||||||||||||||| |||||||    
T  30415418 ccactaactatcacatcagcattccgttggagaattaacagctgagcctaattttgataacggagacaaaatgtgaggattttaaaaacatt-aatgaaa 30415516  T
Q  197 tgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    ||||||||||||||||| ||||| || |    ||| ||||||||||||| |||||||||||    
T  30415517 tgtagggactattcttcgaaggagcgta----aaatgtaaggactaaaaccatatttaacc 30415573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 98 - 218
Target Start/End: Complemental strand, 18339229 - 18339108
Alignment:
Q  98 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 196  Q
    |||||||||  |||||||| |||||||||||||||||||| ||  ||||||||| ||| |  ||||| ||||||| ||||||||||||||||||||||||    
T  18339229 ccactaactgtcacatcaacattccgttagagaattaacagcatggactaattttgatgatggagataaaatgtgaggattttaaaaacatttaatgaaa 18339130  T
Q  197 tgtagggactattcttcaaagg 218  Q
    | ||| ||||||||||||||||    
T  18339129 tatagagactattcttcaaagg 18339108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 128 - 256
Target Start/End: Original strand, 8750324 - 8750449
Alignment:
Q  128 agaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacg 226  Q
    |||||||||| ||  ||||||||| |||||| ||||| |||| || |||||||||| ||||||||| ||||||||||||||||||||||||     ||||    
T  8750324 agaattaacaacatggactaattttgataacggagataaaatatgaggattttaaacacatttaataaaatgtagggactattcttcaaag----aaacg 8750419  T
Q  227 caaaacgtaaggactaaaaacatatttaac 256  Q
    ||||| ||||||||||||||||||||||||    
T  8750420 caaaatgtaaggactaaaaacatatttaac 8750449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 109 - 256
Target Start/End: Complemental strand, 16284419 - 16284275
Alignment:
Q  109 cacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggacta 207  Q
    |||||||  |||||||||||||||||||| ||  ||||||||| |||||| ||||| |||| || |||||||||||||||||||| |||| ||  |||||    
T  16284419 cacatcagcattccgttagagaattaacaacaatgactaattttgataacggagataaaatatgaggattttaaaaacatttaataaaatataaagacta 16284320  T
Q  208 ttcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaac 256  Q
    |||||||||      ||||||||| ||||||||||||||||||||||||    
T  16284319 ttcttcaaa----aaaacgcaaaatgtaaggactaaaaacatatttaac 16284275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 109 - 257
Target Start/End: Complemental strand, 31176652 - 31176507
Alignment:
Q  109 cacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggacta 207  Q
    ||||||| |||||||||| ||| |||||| ||  ||||||||| |||||| | ||| |||| ||  ||||||||||||||||||||||||||| |||||     
T  31176652 cacatcagtattccgttaaagagttaacagcaaggactaattttgataacggggataaaatatgacgattttaaaaacatttaatgaaatgtatggactg 31176553  T
Q  208 ttcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||||||||||     ||||||||  ||||||||||||||||||||||||    
T  31176552 ttcttcaaaggg----acgcaaaatataaggactaaaaacatatttaacc 31176507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 109 - 216
Target Start/End: Original strand, 3406805 - 3406913
Alignment:
Q  109 cacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggacta 207  Q
    |||||||| ||||||||||| |||||| ||||| ||||||||| |||||||||||| ||||||| | |||||||||| ||||||| |||| | || ||||    
T  3406805 cacatcaacattccgttagaaaattaatatcagggactaattttgataacagagataaaatgtgagaattttaaaaatatttaataaaatattggaacta 3406904  T
Q  208 ttcttcaaa 216  Q
    |||||||||    
T  3406905 ttcttcaaa 3406913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 98 - 216
Target Start/End: Complemental strand, 13987439 - 13987319
Alignment:
Q  98 ccactaactagcacatcaatattccgttagagaattaacatcagagactaa-tttgataacagagatcaaatgtgtggatttt-aaaaacatttaatgaa 195  Q
    |||||||||  |||||||  |||||||||||||||||||| |||||||||| ||| ||||| ||||| ||||||| | ||||| ||||||||||||||||    
T  13987439 ccactaactgtcacatcatcattccgttagagaattaacagcagagactaattttaataacggagataaaatgtgagaattttaaaaaacatttaatgaa 13987340  T
Q  196 atgtagggactattcttcaaa 216  Q
    || ||| || |||||||||||    
T  13987339 atatagagattattcttcaaa 13987319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 149 - 257
Target Start/End: Complemental strand, 18999470 - 18999366
Alignment:
Q  149 tttgataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaaca 248  Q
    ||||||||| ||||| ||||| | |||||||||||| ||||||||||||||| |||||||||||||||     ||  |||||| ||||||||||||||||    
T  18999470 tttgataacggagataaaatgagaggattttaaaaatatttaatgaaatgtatggactattcttcaaa----agagtgcaaaatgtaaggactaaaaaca 18999375  T
Q  249 tatttaacc 257  Q
    |||||||||    
T  18999374 tatttaacc 18999366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 99 - 258
Target Start/End: Complemental strand, 35373603 - 35373453
Alignment:
Q  99 cactaactagcacatcaatattccgttagagaattaacatcagagactaa-tttgataacagagatcaaatgtgtggattttaaaaacatttaatgaaat 197  Q
    |||||||||  |||||| ||||||||||||||||||||| ||| |||||| ||| ||||| | ||| |||| || |||||||||||| ||||||||||||    
T  35373603 cactaactactacatcagtattccgttagagaattaacagcagtgactaattttaataacggggataaaatatgaggattttaaaaatatttaatgaaat 35373504  T
Q  198 gtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacct 258  Q
    ||||      ||||||||||    | || ||||| |||||||||||||| |||||||||||    
T  35373503 gtag------ttcttcaaag----ggacacaaaatgtaaggactaaaaatatatttaacct 35373453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 100 - 213
Target Start/End: Complemental strand, 3406613 - 3406499
Alignment:
Q  100 actaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatg 198  Q
    |||||||  |||||||| |||| || | ||||||||||||||| | |||||| |||||||||||| |||| |  |||||||||||||||||||||||||     
T  3406613 actaactgccacatcaacattctgtgaaagaattaacatcagatattaattttgataacagagataaaatataaggattttaaaaacatttaatgaaata 3406514  T
Q  199 tagggactattcttc 213  Q
    || | ||||||||||    
T  3406513 tatgaactattcttc 3406499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 98 - 264
Target Start/End: Complemental strand, 15978544 - 15978382
Alignment:
Q  98 ccactaactagcacatcaatattccgttagagaattaacatcagagactaatttga-taacagagatcaaatgtgtggattttaaaaacatttaatgaaa 196  Q
    |||||||||  |||||||  |||| |||| |||||||||| ||  ||||||||| | |||| ||||| ||||||| |  |||||||||||||||||||||    
T  15978544 ccactaactgccacatcagcattctgttaaagaattaacaacaatgactaattttaataaccgagataaaatgtgag--ttttaaaaacatttaatgaaa 15978447  T
Q  197 tgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacctataaaa 264  Q
    | ||| ||||||||||| ||  |   ||| |||||  |||||||||||||||||||||||||| ||||    
T  15978446 tatagagactattcttccaaaaa---aacacaaaatataaggactaaaaacatatttaacctaaaaaa 15978382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 257
Target Start/End: Complemental strand, 87107 - 87019
Alignment:
Q  165 aaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||||||  ||||||||||||||||||||||||||||||  |||||||||   ||| ||||||||||  ||| ||||||||||||||||||||    
T  87107 aaatgtgaagattttaaaaacatttaatgaaatgtaggggttattcttca---gat-gaacgcaaaatataaagactaaaaacatatttaacc 87019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 117 - 201
Target Start/End: Complemental strand, 35383377 - 35383292
Alignment:
Q  117 tattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtag 201  Q
    |||||||||||| |||||||| ||  ||||||||| |||||| | ||| |||| || |||||||||||||||||||||||||||||    
T  35383377 tattccgttagaaaattaacagcatggactaattttgataacggggataaaatatgaggattttaaaaacatttaatgaaatgtag 35383292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 257
Target Start/End: Original strand, 22231170 - 22231250
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||||| |||||||||||||||||| |||||||||||||| ||||    |  |||||||  ||||||||||||||||||||||||    
T  22231170 ggatttcaaaaacatttaatgaaatatagggactattctttaaag----gggcgcaaaatataaggactaaaaacatatttaacc 22231250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 173 - 257
Target Start/End: Complemental strand, 119264 - 119184
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||||||||||||||||| ||||||||| ||||||||||| ||||  ||  ||||||||  ||||||| ||||||||||||||||    
T  119264 ggattttaaaaacatttattgaaatgtaaggactattctttaaag--tc--acgcaaaatctaaggaccaaaaacatatttaacc 119184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 109 - 216
Target Start/End: Complemental strand, 1650152 - 1650041
Alignment:
Q  109 cacatcaatattccgttagagaattaacatcagagactaatt----tgataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtaggga 204  Q
    |||||||| ||||||||| |||||||||| |||||| |||||    ||||||| ||||| |||| |  | |||||||||||||||||| ||||||||  |    
T  1650152 cacatcaacattccgttaaagaattaacaacagagattaattattttgataacggagataaaatataagaattttaaaaacatttaataaaatgtagata 1650053  T
Q  205 ctattcttcaaa 216  Q
     |||||||||||    
T  1650052 atattcttcaaa 1650041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 174 - 257
Target Start/End: Original strand, 18340661 - 18340740
Alignment:
Q  174 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||    |  ||||| | ||||||||||||| |||||||||||    
T  18340661 gattttaaaaacatttaatgaaatgtaaggactattcttaaaag----gggcgcaacatgtaaggactaaaatcatatttaacc 18340740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 173 - 257
Target Start/End: Complemental strand, 39402291 - 39402212
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||||||||||||||||| ||||||||||||||||||| |||||  ||||  ||||||| ||| |||| ||||||||||||||||    
T  39402291 ggattttaaaaacatttattgaaatgtagggactattc-tcaaa--atcg--cgcaaaatgtagggaccaaaaacatatttaacc 39402212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 264
Target Start/End: Complemental strand, 3191877 - 3191791
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacctataaaa 264  Q
    |||||||||||||||||| ||||||||| ||||||||| |||||  ||||   |||||| ||| ||||||||||||||||||||| ||||||    
T  3191877 ggattttaaaaacatttattgaaatgtaaggactattc-tcaaa--atcg--tgcaaaatgtagggactaaaaacatatttaacccataaaa 3191791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 173 - 259
Target Start/End: Complemental strand, 21949479 - 21949398
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaaccta 259  Q
    |||||||||||||||||| ||||||||||||||||||| |||||  ||||  || |||| ||| |||| ||||||||||||||||||    
T  21949479 ggattttaaaaacatttattgaaatgtagggactattc-tcaaa--atcg--cgtaaaatgtagggaccaaaaacatatttaaccta 21949398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 212
Target Start/End: Original strand, 21949841 - 21949880
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattctt 212  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  21949841 ggattttaaaaacatttattgaaatgtagggactattctt 21949880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 257
Target Start/End: Original strand, 4187838 - 4187926
Alignment:
Q  165 aaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    ||||||| |||||||||||| ||||| ||||||||| |||||||| || ||||  | |  ||||||| ||| |||||||||||||||||||||    
T  4187838 aaatgtgaggattttaaaaatatttattgaaatgtaaggactattatttaaag--ttg--cgcaaaatgtagggactaaaaacatatttaacc 4187926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 211
Target Start/End: Original strand, 5747202 - 5747240
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattct 211  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  5747202 ggattttaaaaacatttattgaaatgtagggactattct 5747240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 211
Target Start/End: Complemental strand, 6543494 - 6543456
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattct 211  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  6543494 ggattttaaaaacatttattgaaatgtagggactattct 6543456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 257
Target Start/End: Complemental strand, 8750089 - 8750010
Alignment:
Q  174 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    ||||||||||| ||||||||||||||||||| |||| |||||||    |  ||||||| ||||| | |||||||||||||||||    
T  8750089 gattttaaaaatatttaatgaaatgtagggattattattcaaag----gggcgcaaaatgtaagaattaaaaacatatttaacc 8750010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 209
Target Start/End: Original strand, 14626077 - 14626135
Alignment:
Q  151 tgataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactatt 209  Q
    |||||||||| |  ||||||  |||||||||||||||||| ||||||||||||||||||    
T  14626077 tgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtagggactatt 14626135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 257
Target Start/End: Original strand, 19353079 - 19353159
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||||||||||||||||| ||||||||  ||||||||||||||||  ||  || |||||  ||||||| ||||||||||||||||    
T  19353079 ggattttaaaaacatttattgaaatgtgaggactattcttcaaag--tc--acacaaaatctaaggaccaaaaacatatttaacc 19353159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 211
Target Start/End: Original strand, 28641602 - 28641640
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattct 211  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  28641602 ggattttaaaaacatttattgaaatgtagggactattct 28641640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 257
Target Start/End: Original strand, 31093437 - 31093516
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||||||||||||||| | |||||||||||||||||| ||||||  ||||  ||||||| ||| |||| ||||||||||||||||    
T  31093437 ggattttaaaaacattcattgaaatgtagggactatt-ttcaaa--atcg--cgcaaaatgtagggaccaaaaacatatttaacc 31093516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 211
Target Start/End: Complemental strand, 31162500 - 31162462
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattct 211  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  31162500 ggattttaaaaacatttattgaaatgtagggactattct 31162462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 175 - 256
Target Start/End: Original strand, 20892557 - 20892633
Alignment:
Q  175 attttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaac 256  Q
    |||||||||||||||||| ||| |||| |||||||||||||| |     ||||||||  |||||| ||||||||||||||||    
T  20892557 attttaaaaacatttaattaaacgtagagactattcttcaaatg-----acgcaaaatttaaggattaaaaacatatttaac 20892633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 37813453 - 37813412
Alignment:
Q  175 attttaaaaacatttaatgaaatgtagggactattcttcaaa 216  Q
    |||||||||||| ||||||||||||| |||||||||||||||    
T  37813453 attttaaaaacacttaatgaaatgtatggactattcttcaaa 37813412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 217
Target Start/End: Original strand, 119794 - 119838
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattcttcaaag 217  Q
    |||||||||||||||||| ||||||| | ||||||||||||||||    
T  119794 ggattttaaaaacatttattgaaatgcaaggactattcttcaaag 119838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 192
Target Start/End: Complemental strand, 3935518 - 3935451
Alignment:
Q  123 gttagagaattaacatcagagactaat-ttgataacagagatcaaatgtgtggattttaaaaacatttaat 192  Q
    |||||||||||||||   ||||||||| |||||||  ||||| ||||||| ||||||||||||||||||||    
T  3935518 gttagagaattaaca---gagactaatattgataatggagataaaatgtgaggattttaaaaacatttaat 3935451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 217
Target Start/End: Complemental strand, 4186834 - 4186790
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattcttcaaag 217  Q
    |||| ||||||||||||| ||||||||||| ||||||||||||||    
T  4186834 ggatattaaaaacatttattgaaatgtaggtactattcttcaaag 4186790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 217
Target Start/End: Complemental strand, 19352551 - 19352507
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattcttcaaag 217  Q
    |||||||||||||||||| ||||||| | ||||||||||||||||    
T  19352551 ggattttaaaaacatttattgaaatgcaaggactattcttcaaag 19352507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 219
Target Start/End: Original strand, 30351716 - 30351760
Alignment:
Q  175 attttaaaaacatttaatgaaatgtagggactattcttcaaagga 219  Q
    |||||||||| ||||| ||||||||||||||||||||| ||||||    
T  30351716 attttaaaaatatttattgaaatgtagggactattctttaaagga 30351760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 109 - 187
Target Start/End: Complemental strand, 29751802 - 29751724
Alignment:
Q  109 cacatcaatattccgttagagaattaacatcagagactaa-tttgataacagagatcaaatgtgtggattttaaaaacat 187  Q
    |||||||| ||||||||||||||||||   ||| |||||| ||||||||| ||||| ||||||| | |||||||||||||    
T  29751802 cacatcaacattccgttagagaattaagcgcagggactaattttgataac-gagataaaatgtgagaattttaaaaacat 29751724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 109 - 187
Target Start/End: Complemental strand, 29752468 - 29752390
Alignment:
Q  109 cacatcaatattccgttagagaattaacatcagagactaa-tttgataacagagatcaaatgtgtggattttaaaaacat 187  Q
    |||||||| ||||||||||||||||||   ||| |||||| ||||||||| ||||| ||||||| | |||||||||||||    
T  29752468 cacatcaacattccgttagagaattaagcgcagggactaattttgataac-gagataaaatgtgagaattttaaaaacat 29752390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 211
Target Start/End: Original strand, 3192241 - 3192279
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattct 211  Q
    |||||||||||||||||| ||||||||| ||||||||||    
T  3192241 ggattttaaaaacatttattgaaatgtaaggactattct 3192279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 211
Target Start/End: Original strand, 6543856 - 6543894
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattct 211  Q
    |||||||||||||||||| ||||||||||||| ||||||    
T  6543856 ggattttaaaaacatttattgaaatgtagggattattct 6543894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 211
Target Start/End: Complemental strand, 28641240 - 28641202
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattct 211  Q
    |||||||||||||||||| ||||||||||||| ||||||    
T  28641240 ggattttaaaaacatttattgaaatgtagggattattct 28641202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 137
Target Start/End: Original strand, 18339409 - 18339446
Alignment:
Q  100 actaactagcacatcaatattccgttagagaattaaca 137  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  18339409 actaactatcacatcaatatttcgttagagaattaaca 18339446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 209
Target Start/End: Complemental strand, 119090 - 119054
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactatt 209  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  119090 ggattttaaaaacatttattgaaatgtaaggactatt 119054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 209
Target Start/End: Original strand, 119968 - 120004
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactatt 209  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  119968 ggattttaaaaacatttattgaaatgtaaggactatt 120004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 209
Target Start/End: Original strand, 3406695 - 3406731
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactatt 209  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  3406695 ggattttaaaaacatttattgaaatgtaaggactatt 3406731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 209
Target Start/End: Original strand, 19353240 - 19353284
Alignment:
Q  165 aaatgtgtggattttaaaaacatttaatgaaatgtagggactatt 209  Q
    |||||| |||||||||||||| |||| ||||||||| ||||||||    
T  19353240 aaatgtatggattttaaaaacgtttattgaaatgtaaggactatt 19353284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 92; Significance: 1e-44; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 98 - 257
Target Start/End: Original strand, 51906753 - 51906909
Alignment:
Q  98 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 196  Q
    |||||||||  |||||||| |||||||||||||||||||| |||| |||||||| |||||| ||||| ||||||| |||||||||||||||||||||| |    
T  51906753 ccactaactctcacatcaacattccgttagagaattaacagcagaaactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaga 51906852  T
Q  197 tgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||||||||||||||||||||    || ||||||| |||||||||||||||||||||||||    
T  51906853 tgtagggactattcttcaaag----gagcgcaaaatgtaaggactaaaaacatatttaacc 51906909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 98 - 257
Target Start/End: Complemental strand, 29691681 - 29691525
Alignment:
Q  98 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 196  Q
    |||||||||  |||||||| ||||| ||||||||||||||  |||||||||||| |||||| ||||| ||||||| ||||||||||||||||||||||||    
T  29691681 ccactaactgtcacatcaacattccattagagaattaacagtagagactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaa 29691582  T
Q  197 tgtagggactattcttcaaa-ggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||||||||||||||||||| ||||     ||||||  ||||||||||||||||||||||||    
T  29691581 tgtagggactattcttcaaatggat-----gcaaaatataaggactaaaaacatatttaacc 29691525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 98 - 256
Target Start/End: Complemental strand, 3296700 - 3296544
Alignment:
Q  98 ccactaactagcacatcaatattccgttagagaattaacatcagag-actaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaa 195  Q
    |||||||||  ||| |||||||||||||| |||||||||||||| | |||||||| |||||| ||||| ||||||| |||||||||||||||||||||||    
T  3296700 ccactaactgccacgtcaatattccgttaaagaattaacatcaggggactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaa 3296601  T
Q  196 atgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaac 256  Q
    ||||||||| ||||||||||||    |  ||||||| ||||||||||||||||||||||||    
T  3296600 atgtagggaatattcttcaaag----gggcgcaaaatgtaaggactaaaaacatatttaac 3296544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 98 - 257
Target Start/End: Complemental strand, 51906576 - 51906420
Alignment:
Q  98 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 196  Q
    |||||||||  |||||||||||||||||| ||| |||||||||| ||||||||| |||||| ||||| ||||||| |||| |||||||||||||||||||    
T  51906576 ccactaactgtcacatcaatattccgttaaagagttaacatcagggactaattttgataacggagataaaatgtgaggatattaaaaacatttaatgaaa 51906477  T
Q  197 tgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
     ||||||||||||||||||||       ||||||| |||| ||||||||||||||||||||    
T  51906476 cgtagggactattcttcaaag----aggcgcaaaatgtaaagactaaaaacatatttaacc 51906420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 98 - 257
Target Start/End: Original strand, 3296878 - 3297034
Alignment:
Q  98 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 196  Q
    |||||||||  |||||||  |||| ||||||| ||||| ||||| ||||||||| |||||| ||||| ||||||  ||||||||||||||||||||||||    
T  3296878 ccactaactgccacatcagcattctgttagaggattaatatcagggactaattttgataacggagataaaatgtaaggattttaaaaacatttaatgaaa 3296977  T
Q  197 tgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
     ||||||||||||||||||||| |    ||||||| |||||||||||||| ||||||||||    
T  3296978 cgtagggactattcttcaaagggt----cgcaaaatgtaaggactaaaaatatatttaacc 3297034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 98 - 216
Target Start/End: Complemental strand, 30608401 - 30608282
Alignment:
Q  98 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 196  Q
    |||||||||  ||||||||||| | ||||||||||||| | ||||||||||||| |||||| ||||| ||||||| |||||||||||| || ||||||||    
T  30608401 ccactaactgccacatcaatatcctgttagagaattaatagcagagactaattttgataacggagataaaatgtgaggattttaaaaatatataatgaaa 30608302  T
Q  197 tgtagggactattcttcaaa 216  Q
    ||||||||||||||||||||    
T  30608301 tgtagggactattcttcaaa 30608282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 100 - 257
Target Start/End: Complemental strand, 48554050 - 48553896
Alignment:
Q  100 actaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatg 198  Q
    |||||||  |||||||  ||||||||| |||||||||| ||  ||||||||| |||||| ||||| ||||||| ||||||||||||  ||||||||||||    
T  48554050 actaactgtcacatcagcattccgttaaagaattaacaacaatgactaattttgataacggagataaaatgtgaggattttaaaaaggtttaatgaaatg 48553951  T
Q  199 tagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    || |||||||||||||||||     |||||||| ||||||||||||||| |||||||||    
T  48553950 tatggactattcttcaaaggg----acgcaaaatgtaaggactaaaaacgtatttaacc 48553896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 119 - 258
Target Start/End: Original strand, 35166821 - 35166957
Alignment:
Q  119 ttccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaag 217  Q
    ||||||||||||||||||| ||||||||||||| |||||| ||||| ||||||| ||||||||||||||||||||||||||  |||| |||| ||| |||    
T  35166821 ttccgttagagaattaacagcagagactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgctgggattatttttcgaag 35166920  T
Q  218 gatcgaacgcaaaacgtaaggactaaaaacatatttaacct 258  Q
        | |||||||| ||||| |||||| |||||||||||||    
T  35166921 ----ggacgcaaaatgtaagcactaaagacatatttaacct 35166957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 109 - 216
Target Start/End: Original strand, 34129245 - 34129353
Alignment:
Q  109 cacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggacta 207  Q
    |||||||  |||||||| ||||||||||| |   ||||||||| |||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||    
T  34129245 cacatcagcattccgttggagaattaacagcttggactaattttgataacagagataaaatgtgaggattttaaaaatatttaatgaaatgtagggacta 34129344  T
Q  208 ttcttcaaa 216  Q
    |||||||||    
T  34129345 ttcttcaaa 34129353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 125 - 257
Target Start/End: Original strand, 7118125 - 7118254
Alignment:
Q  125 tagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcga 223  Q
    ||||||||||||| ||  ||||||||| |||||  ||||| |||| || | |||||||||||||||||||||||||| ||||||||||||||||    |     
T  7118125 tagagaattaacagcatggactaattttgataatggagataaaatttgagaattttaaaaacatttaatgaaatgtatggactattcttcaaag----gg 7118220  T
Q  224 acgcaaaacgtaaggactaaaaacatatttaacc 257  Q
     ||||||| |||||||||||||||||||||||||    
T  7118221 gcgcaaaatgtaaggactaaaaacatatttaacc 7118254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 98 - 265
Target Start/End: Original strand, 29691846 - 29692011
Alignment:
Q  98 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 196  Q
    |||||||||| ||||||||  ||||||||||||||||||  ||  ||||||||| |||||||||||| ||||||| |||||||||||| |||||||||||    
T  29691846 ccactaactaccacatcaacgttccgttagagaattaaccgcatggactaattttgataacagagataaaatgtgaggattttaaaaatatttaatgaaa 29691945  T
Q  197 tgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaa-cctataaaat 265  Q
    | ||   |||||| |||||||    || || |||| | || |||||||||||||||||| ||||||||||    
T  29691946 tataaaaactattattcaaag----gagcgtaaaatgcaaagactaaaaacatatttaatcctataaaat 29692011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 118 - 217
Target Start/End: Original strand, 30608587 - 30608687
Alignment:
Q  118 attccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaa 216  Q
    ||||||||| | |||||||| ||| ||||||||| |||||| ||||| ||||||| ||||||||||||||||||||||||| ||| ||||||||||||||    
T  30608587 attccgttaaataattaacaacagtgactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatatagagactattcttcaaa 30608686  T
Q  217 g 217  Q
    |    
T  30608687 g 30608687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 98 - 212
Target Start/End: Complemental strand, 26168148 - 26168034
Alignment:
Q  98 ccactaactagcacatcaatattccgttagagaattaacatcagagactaa-tttgataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 196  Q
    |||||||||  |||||||  |||||||||||||||||||| |||||||||| ||||||||| ||||| ||||||| |||||||||||| ||||||| |||    
T  26168148 ccactaactgtcacatcagcattccgttagagaattaacagcagagactaattttgataacggagataaaatgtgaggattttaaaaatatttaat-aaa 26168050  T
Q  197 tgtagggactattctt 212  Q
    |||||  |||||||||    
T  26168049 tgtagaaactattctt 26168034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 109 - 218
Target Start/End: Original strand, 30047961 - 30048071
Alignment:
Q  109 cacatcaatattccgttagagaattaacatcagagactaatttga-taacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggacta 207  Q
    |||||||| ||||||||||| |||||||| ||||||||||||| | |||| ||||| |||| || |||||||||||| ||||||||||||||| | |||     
T  30047961 cacatcaacattccgttagataattaacaacagagactaattttaataacggagataaaatatgaggattttaaaaatatttaatgaaatgtaagaactg 30048060  T
Q  208 ttcttcaaagg 218  Q
    |||||||||||    
T  30048061 ttcttcaaagg 30048071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 109 - 218
Target Start/End: Original strand, 30062302 - 30062412
Alignment:
Q  109 cacatcaatattccgttagagaattaacatcagagactaatttga-taacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggacta 207  Q
    |||||||| ||||||||||| |||||||| ||||||||||||| | |||| ||||| |||| || |||||||||||| ||||||||||||||| | |||     
T  30062302 cacatcaacattccgttagataattaacaacagagactaattttaataacggagataaaatatgaggattttaaaaatatttaatgaaatgtaagaactg 30062401  T
Q  208 ttcttcaaagg 218  Q
    |||||||||||    
T  30062402 ttcttcaaagg 30062412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 109 - 218
Target Start/End: Original strand, 56106406 - 56106516
Alignment:
Q  109 cacatcaatattccgttagagaattaacatcagagactaatttga-taacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggacta 207  Q
    |||||||| |||  ||||||||||||||||||| ||||||||| | |||| ||||| ||||| | |||||||||||||||||||| |||| |||| ||||    
T  56106406 cacatcaacattatgttagagaattaacatcagggactaattttaataacggagataaaatgagaggattttaaaaacatttaataaaatataggaacta 56106505  T
Q  208 ttcttcaaagg 218  Q
    |||||||||||    
T  56106506 ttcttcaaagg 56106516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 109 - 213
Target Start/End: Original strand, 30952946 - 30953051
Alignment:
Q  109 cacatcaatattccgttagagaattaacatcagagactaatttga-taacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggacta 207  Q
    |||||||| |||| ||||||||||||||| ||  ||||||||| | |||| ||||| ||||||  ||||||||||||||||||||||||||||||||| |    
T  30952946 cacatcaacattctgttagagaattaacaacaaggactaattttaataaccgagataaaatgttaggattttaaaaacatttaatgaaatgtagggacca 30953045  T
Q  208 ttcttc 213  Q
    ||||||    
T  30953046 ttcttc 30953051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 122 - 257
Target Start/End: Complemental strand, 41510200 - 41510068
Alignment:
Q  122 cgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaaggat 220  Q
    |||||||||||||||| ||| ||||||||| |||||  ||||| |||| || |||||||| ||| ||||||| ||||||||||||||||||||||||       
T  41510200 cgttagagaattaacaacagtgactaattttgataagggagataaaatatgaggattttagaaatatttaataaaatgtagggactattcttcaaag--- 41510104  T
Q  221 cgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
     |  ||||||| ||||||| |||||| ||||||||||    
T  41510103 -gggcgcaaaatgtaaggattaaaaatatatttaacc 41510068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 118 - 217
Target Start/End: Complemental strand, 1791284 - 1791184
Alignment:
Q  118 attccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaa 216  Q
    |||||||||||||||||||| ||  ||||||||| ||||||||  || || | || ||||||| |||||||||||||||||||| |||||||||||||||    
T  1791284 attccgttagagaattaacaacatcgactaattttgataacaggtataaagtttgaggatttttaaaacatttaatgaaatgtatggactattcttcaaa 1791185  T
Q  217 g 217  Q
    |    
T  1791184 g 1791184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 99 - 218
Target Start/End: Original strand, 1791483 - 1791603
Alignment:
Q  99 cactaactagcacatcaatattccgttagagaattaacatcagagactaa-tttgataacagagatcaaatgtgtggattttaaaaacatttaatgaaat 197  Q
    ||||||||  |||||||| |||| ||||||||||||||| |||||||||| ||| ||||| ||||| ||||||   ||||||||||||||||||| ||||    
T  1791483 cactaactgccacatcaacattcagttagagaattaacagcagagactaattttaataacggagataaaatgtaaagattttaaaaacatttaataaaat 1791582  T
Q  198 gtagggactattcttcaaagg 218  Q
    ||  | |||||| ||||||||    
T  1791583 gtgagaactatttttcaaagg 1791603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 98 - 216
Target Start/End: Original strand, 48760049 - 48760168
Alignment:
Q  98 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 196  Q
    |||||||||  ||||| || ||||| | |||||||||||| ||  || |||||| |||||||||||| |||||||  ||||||||||||||||||||||     
T  48760049 ccactaactgccacattaacattccttcagagaattaacaacatggattaattttgataacagagataaaatgtgaagattttaaaaacatttaatgaat 48760148  T
Q  197 tgtagggactattcttcaaa 216  Q
    |||| | |||||||||||||    
T  48760149 tgtacgaactattcttcaaa 48760168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 121 - 218
Target Start/End: Complemental strand, 34129127 - 34129029
Alignment:
Q  121 ccgttagagaattaacatcagagactaa-tttgataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaagg 218  Q
    ||||||||||||||||| || ||||||| |||||||||  |||| |||| || | ||||||||||| |||||| |||| ||||||||||||||||||||    
T  34129127 ccgttagagaattaacaacatagactaactttgataacgaagataaaatatgagaattttaaaaacgtttaataaaatatagggactattcttcaaagg 34129029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 98 - 216
Target Start/End: Complemental strand, 5544940 - 5544821
Alignment:
Q  98 ccactaactagcacatcaatattccgttagagaattaacatcagagactaatttga-taacagagatcaaatgtgtggattttaaaaacatttaatgaaa 196  Q
    |||||||||  |||||||| ||||||||| | ||||||||  |  ||||||||||| |||  ||||| ||||||| | |||||||||| |||||||||||    
T  5544940 ccactaactgccacatcaacattccgttaaaaaattaacagtatggactaatttgaataaaggagataaaatgtgagaattttaaaaatatttaatgaaa 5544841  T
Q  197 tgtagggactattcttcaaa 216  Q
    | |||| |||||||||||||    
T  5544840 tataggaactattcttcaaa 5544821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 150 - 217
Target Start/End: Complemental strand, 38759807 - 38759740
Alignment:
Q  150 ttgataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaag 217  Q
    |||||||| ||||| |||| || ||||||||||||||||||||||||||||  |||||||||||||||    
T  38759807 ttgataacggagataaaatttgaggattttaaaaacatttaatgaaatgtatagactattcttcaaag 38759740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 257
Target Start/End: Complemental strand, 54142405 - 54142325
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||  |||  ||||||| ||| ||||||| |||||||||||||    
T  54142405 ggattttaaaaacatttattgaaatgtatggactattcttcaaag--tcg--cgcaaaatgtagggactaataacatatttaacc 54142325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 152 - 217
Target Start/End: Complemental strand, 26984245 - 26984180
Alignment:
Q  152 gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaag 217  Q
    |||||| ||||| ||||||| |||||||||||||||||||| || | |||||||||||||||||||    
T  26984245 gataactgagataaaatgtgaggattttaaaaacatttaataaagtctagggactattcttcaaag 26984180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 258
Target Start/End: Complemental strand, 10580120 - 10580039
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacct 258  Q
    |||||||||||||||||| ||||||||| |||||||| |||||||  ||  |||||||| ||| |||| |||||||||||||||||    
T  10580120 ggattttaaaaacatttattgaaatgtaaggactatttttcaaag--tc--acgcaaaatgtatggaccaaaaacatatttaacct 10580039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 257
Target Start/End: Original strand, 17288383 - 17288463
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||||||||||||||||| |||||||||||||||||| |||||||     | ||||||| ||| ||||||| |||||||||||||    
T  17288383 ggattttaaaaacatttattgaaatgtagggactattattcaaag----tagcgcaaaatgtagggactaataacatatttaacc 17288463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 154 - 211
Target Start/End: Original strand, 12108280 - 12108337
Alignment:
Q  154 taacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattct 211  Q
    |||||||||  ||||||  |||||||||||||||||| ||||||||||||||||||||    
T  12108280 taacagagaaaaaatgtagggattttaaaaacatttattgaaatgtagggactattct 12108337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 256
Target Start/End: Original strand, 26168378 - 26168483
Alignment:
Q  149 tttgataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtag--ggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaa 246  Q
    |||||||||| |||| |||||||  ||||||| ||||||||||| ||||||||  |||||||||| |||||    |  ||||||| ||||||| ||||||    
T  26168378 tttgataacaaagataaaatgtggagattttagaaacatttaataaaatgtaggaggactattctacaaag----gggcgcaaaatgtaaggattaaaaa 26168473  T
Q  247 catatttaac 256  Q
    ||||||||||    
T  26168474 catatttaac 26168483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 173 - 217
Target Start/End: Original strand, 54143511 - 54143555
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattcttcaaag 217  Q
    |||||||||||||||||| | ||||||||||||||||||||||||    
T  54143511 ggattttaaaaacatttattaaaatgtagggactattcttcaaag 54143555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 258
Target Start/End: Original strand, 1791389 - 1791466
Alignment:
Q  177 tttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacct 258  Q
    |||||||||||||| ||||||||| |||||||| |||||||  ||  |||||||||||| || | |||||||||||||||||    
T  1791389 tttaaaaacatttattgaaatgtaaggactatttttcaaag--tc--acgcaaaacgtaggggccaaaaacatatttaacct 1791466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 25916969 - 25917091
Alignment:
Q  97 accactaactagcacatcaatattccgttagagaattaacatcagagactaatttg-ataacag--agatcaaatgtgtggattttaaaaacatttaatg 193  Q
    ||||||||||  |||||||  ||| |||||||||||||| | |||| ||||||||  ||||||   |||| |||| ||   |||||||||||||||||||    
T  25916969 accactaactgtcacatcagcatttcgttagagaattaaaagcagacactaattttcataacacgaagataaaatatgaaaattttaaaaacatttaatg 25917068  T
Q  194 aaatgtagggactattcttcaaa 216  Q
    ||||||| ||| |||||||||||    
T  25917069 aaatgtatggattattcttcaaa 25917091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 212
Target Start/End: Complemental strand, 40841541 - 40841502
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattctt 212  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  40841541 ggattttaaaaacatttattgaaatgtagggactattctt 40841502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 212
Target Start/End: Original strand, 40841903 - 40841942
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattctt 212  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  40841903 ggattttaaaaacatttattgaaatgtagggactattctt 40841942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 212
Target Start/End: Original strand, 55347979 - 55348018
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattctt 212  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  55347979 ggattttaaaaacatttattgaaatgtagggactattctt 55348018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 211
Target Start/End: Complemental strand, 2669086 - 2669048
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattct 211  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  2669086 ggattttaaaaacatttattgaaatgtagggactattct 2669048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 211
Target Start/End: Original strand, 2669448 - 2669486
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattct 211  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  2669448 ggattttaaaaacatttattgaaatgtagggactattct 2669486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 211
Target Start/End: Complemental strand, 12922721 - 12922683
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattct 211  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  12922721 ggattttaaaaacatttattgaaatgtagggactattct 12922683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 211
Target Start/End: Original strand, 28957752 - 28957790
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattct 211  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  28957752 ggattttaaaaacatttattgaaatgtagggactattct 28957790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 34294529 - 34294488
Alignment:
Q  174 gattttaaaaacatttaatgaaatgtagggactattcttcaaa 216  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  34294529 gattttaaaaacatttaatgaaatgta-ggactattcttcaaa 34294488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 211
Target Start/End: Original strand, 38026117 - 38026155
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattct 211  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  38026117 ggattttaaaaacatttattgaaatgtagggactattct 38026155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 257
Target Start/End: Original strand, 43979999 - 43980078
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||||||||||||||| | ||||||||||||||||||| |||||  ||||  ||||||| ||| |||| ||||||||||||||||    
T  43979999 ggattttaaaaacattcattgaaatgtagggactattc-tcaaa--atcg--cgcaaaatgtagggaccaaaaacatatttaacc 43980078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 257
Target Start/End: Complemental strand, 54167574 - 54167494
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||||||||||||||||| |||||| || ||||||||||| |||  |||  |||||||| ||| ||||| |||||||||||||||    
T  54167574 ggattttaaaaacatttattgaaatataaggactattcttgaaa--atc--acgcaaaatgtagggacttaaaacatatttaacc 54167494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 215
Target Start/End: Original strand, 35469016 - 35469115
Alignment:
Q  117 tattccgttagagaattaacatcagagactaattt-gataacagagatcaaa-tgtgtggattttaaaaacatttaatgaaatgtagggactattcttca 214  Q
    |||||||||| |||||||||| ||  || |||||| |||||| ||||| ||| | || ||||||||||||| |||||||||||||| ||| |||||||||    
T  35469016 tattccgttaaagaattaacaacatggattaattttgataacggagataaaaatttgaggattttaaaaac-tttaatgaaatgtaaggattattcttca 35469114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 174 - 209
Target Start/End: Original strand, 21235472 - 21235507
Alignment:
Q  174 gattttaaaaacatttaatgaaatgtagggactatt 209  Q
    ||||||||||||||||| ||||||||||||||||||    
T  21235472 gattttaaaaacatttattgaaatgtagggactatt 21235507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 211
Target Start/End: Complemental strand, 28505288 - 28505250
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattct 211  Q
    |||||||||||||||||| ||||||||| ||||||||||    
T  28505288 ggattttaaaaacatttattgaaatgtaaggactattct 28505250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 211
Target Start/End: Complemental strand, 28957390 - 28957352
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattct 211  Q
    |||||||||||||||||| ||||||||||||| ||||||    
T  28957390 ggattttaaaaacatttattgaaatgtagggattattct 28957352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 211
Target Start/End: Complemental strand, 31227958 - 31227920
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattct 211  Q
    |||||||||||||||||| ||||||||||||| ||||||    
T  31227958 ggattttaaaaacatttattgaaatgtagggattattct 31227920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 211
Target Start/End: Original strand, 31228320 - 31228358
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattct 211  Q
    |||||||||||||||||| ||||||||||| ||||||||    
T  31228320 ggattttaaaaacatttattgaaatgtaggaactattct 31228358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 48759942 - 48759813
Alignment:
Q  122 cgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaaggat 220  Q
    ||||||| |||||||  |||| |||||||| ||  |||||||| ||||||| | |||||||||||||||||| ||| ||| |||||||| ||||||        
T  48759942 cgttagaaaattaacggcagaaactaattttgacgacagagataaaatgtgagaattttaaaaacatttaat-aaaagtaaggactatt-ttcaaa---- 48759849  T
Q  221 cgaacgcaaaacgtaaggactaaaaacatatttaac 256  Q
     || || |||| |||| |||||||||||||||||||    
T  48759848 tgagcgtaaaatgtaacgactaaaaacatatttaac 48759813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 257
Target Start/End: Original strand, 54168833 - 54168913
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||||||||||| ||||| | ||||||||||| ||||||||||||  ||  ||||||||  || ||| |||||||||||||||||    
T  54168833 ggattttaaaaatatttattaaaatgtagggattattcttcaaag--tc--acgcaaaatatagggattaaaaacatatttaacc 54168913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 211
Target Start/End: Complemental strand, 55347640 - 55347602
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattct 211  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  55347640 ggattttaaaaacatttattaaaatgtagggactattct 55347602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 257
Target Start/End: Complemental strand, 1791354 - 1791321
Alignment:
Q  224 acgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||||||| |||||||||||||||||||||||||    
T  1791354 acgcaaaatgtaaggactaaaaacatatttaacc 1791321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 179
Target Start/End: Original strand, 5545119 - 5545199
Alignment:
Q  99 cactaactagcacatcaatattccgttagagaattaacatcagagactaa-tttgataacagagatcaaatgtgtggatttt 179  Q
    ||||||||| ||| ||| | ||| ||||||||||||||| || ||||||| ||||||||| ||||| ||||||| |||||||    
T  5545119 cactaactatcacttcagtgttctgttagagaattaacaaca-agactaattttgataacggagataaaatgtgaggatttt 5545199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 257
Target Start/End: Original strand, 1317504 - 1317581
Alignment:
Q  175 attttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||||||||||||| | |||||||||||||||||| ||||||  ||||  ||||||| ||| | || ||||||||||||||||    
T  1317504 attttaaaaacattcattgaaatgtagggactatt-ttcaaa--atcg--cgcaaaatgtaggaaccaaaaacatatttaacc 1317581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 217
Target Start/End: Complemental strand, 3296793 - 3296753
Alignment:
Q  177 tttaaaaacatttaatgaaatgtagggactattcttcaaag 217  Q
    |||||||||||||| | ||||||| ||||||||||||||||    
T  3296793 tttaaaaacatttattaaaatgtaaggactattcttcaaag 3296753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 257
Target Start/End: Complemental strand, 19310819 - 19310787
Alignment:
Q  225 cgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    ||||||| |||||||||||||||||||||||||    
T  19310819 cgcaaaatgtaaggactaaaaacatatttaacc 19310787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 209
Target Start/End: Complemental strand, 21235107 - 21235071
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactatt 209  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  21235107 ggattttaaaaacatttattgaaatgtaaggactatt 21235071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 217
Target Start/End: Original strand, 35166708 - 35166748
Alignment:
Q  177 tttaaaaacatttaatgaaatgtagggactattcttcaaag 217  Q
    |||||||||||||| | ||||||| ||||||||||||||||    
T  35166708 tttaaaaacatttattaaaatgtaaggactattcttcaaag 35166748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 209
Target Start/End: Complemental strand, 47053841 - 47053805
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactatt 209  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  47053841 ggattttaaaaacatttattgaaatgtaaggactatt 47053805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 87; Significance: 1e-41; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 98 - 257
Target Start/End: Original strand, 9218448 - 9218603
Alignment:
Q  98 ccactaactagcacatcaatattccgttagagaattaacatcagagactaatttgataacagagatcaaatgtgtggattttaaaaacatttaatgaaat 197  Q
    ||||||| || |||||||  |||||||||||||||||||| |||||||||||||||||||  |||| |||||||  ||||||||||||||||||||||||    
T  9218448 ccactaattatcacatcagcattccgttagagaattaacaacagagactaatttgataacgaagataaaatgtgatgattttaaaaacatttaatgaaat 9218547  T
Q  198 gtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
     |||||||||||||||||||    || ||||||| |||| ||||||||||||||||||||    
T  9218548 atagggactattcttcaaag----gagcgcaaaatgtaatgactaaaaacatatttaacc 9218603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 98 - 217
Target Start/End: Complemental strand, 9217976 - 9217856
Alignment:
Q  98 ccactaactagcacatcaatattccgttagagaattaacatcagagactaatttga-taacagagatcaaatgtgtggattttaaaaacatttaatgaaa 196  Q
    |||||||||  ||||||||  |||||||| |||||||||| ||| ||||||||| | |||| ||||| ||||||| ||||||||||||||||||||||||    
T  9217976 ccactaactgccacatcaacgttccgttaaagaattaacaacagtgactaattttaataacggagataaaatgtgaggattttaaaaacatttaatgaaa 9217877  T
Q  197 tgtagggactattcttcaaag 217  Q
    |||||||||||||||||||||    
T  9217876 tgtagggactattcttcaaag 9217856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 102 - 257
Target Start/End: Complemental strand, 22814448 - 22814296
Alignment:
Q  102 taactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgta 200  Q
    |||||| |||||||| ||||||||||| |||||| | ||| ||||||||| ||||||  |||| ||||||| ||||||||||||||||||||||||||||    
T  22814448 taactatcacatcaacattccgttagaaaattaatagcagggactaattttgataacgaagataaaatgtgaggattttaaaaacatttaatgaaatgta 22814349  T
Q  201 gggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
     ||||||||||||||||    |  ||||||| ||||| | |||||||||||||||||    
T  22814348 tggactattcttcaaag----gggcgcaaaatgtaagaattaaaaacatatttaacc 22814296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 98 - 216
Target Start/End: Complemental strand, 44504248 - 44504129
Alignment:
Q  98 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 196  Q
    |||||||||  |||||||  |||||||||||||||||||| ||  ||||||||| |||||| ||||| ||||||| |||||||||||| |||||||||||    
T  44504248 ccactaactgtcacatcatcattccgttagagaattaacaacatggactaattttgataacggagataaaatgtgaggattttaaaaatatttaatgaaa 44504149  T
Q  197 tgtagggactattcttcaaa 216  Q
    ||||||||||||||||||||    
T  44504148 tgtagggactattcttcaaa 44504129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 101 - 257
Target Start/End: Original strand, 26741241 - 26741390
Alignment:
Q  101 ctaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgt 199  Q
    |||||| ||||||||  |||||||||||||||||||| ||  ||||||||| |||||||||||| ||||||| |||||||||||||    ||||||||||    
T  26741241 ctaactggcacatcagcattccgttagagaattaacagcaatgactaattttgataacagagataaaatgtgaggattttaaaaac----aatgaaatgt 26741336  T
Q  200 agggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |  |||||||||||||||    |  ||||||||||||||||| |||||||||||||||    
T  26741337 aaagactattcttcaaag----gggcgcaaaacgtaaggacttaaaacatatttaacc 26741390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 98 - 257
Target Start/End: Complemental strand, 43933596 - 43933440
Alignment:
Q  98 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 196  Q
    |||||||||  |||||||  ||||| ||| |||||||||| ||| ||||||||| ||||||  |||| ||||||| |||||||||||| |||||||||||    
T  43933596 ccactaactgtcacatcagcattccattatagaattaacaacagggactaattttgataacgaagataaaatgtgaggattttaaaaatatttaatgaaa 43933497  T
Q  197 tgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    ||||||||||||||||||||    ||  | ||||| |||||||||||||| ||||||||||    
T  43933496 tgtagggactattcttcaaa----cgggcacaaaatgtaaggactaaaaatatatttaacc 43933440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 98 - 214
Target Start/End: Complemental strand, 27013565 - 27013448
Alignment:
Q  98 ccactaactagcacatcaatattccgttagagaattaacatcagagactaatt-tgataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 196  Q
    |||||||||  ||||||| ||||||||||||||||||||| || ||||||||| ||||||| ||||| ||||||  |||||||||||||||||||| |||    
T  27013565 ccactaactgccacatcagtattccgttagagaattaacaacatagactaattgtgataacggagataaaatgtaaggattttaaaaacatttaataaaa 27013466  T
Q  197 tgtagggactattcttca 214  Q
    || ||| |||||||||||    
T  27013465 tgcaggaactattcttca 27013448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 109 - 257
Target Start/End: Complemental strand, 51471480 - 51471335
Alignment:
Q  109 cacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggacta 207  Q
    |||||||| ||||  ||||||||  |||  ||||||||||||| |||||| ||||| ||||||| |||||||||||||||||||||||||||||  ||||    
T  51471480 cacatcaacattctcttagagaaccaacgacagagactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagaaacta 51471381  T
Q  208 ttcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||||||||||     |||||||| ||||| ||||| |||||||||||||    
T  51471380 ttcttcaaaggg----acgcaaaatgtaagaactaagaacatatttaacc 51471335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 109 - 257
Target Start/End: Complemental strand, 25770466 - 25770321
Alignment:
Q  109 cacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggacta 207  Q
    |||||||  |||||||||||||||||||| ||  || |||||| ||||||   ||| ||||||| ||||| |||||||||||||||||||||||||||||    
T  25770466 cacatcagcattccgttagagaattaacaacatggattaattttgataacgatgataaaatgtgaggattctaaaaacatttaatgaaatgtagggacta 25770367  T
Q  208 ttcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    ||||||||||    | |  ||||| |||||||||||||||||||| ||||    
T  25770366 ttcttcaaag----ggatacaaaatgtaaggactaaaaacatattgaacc 25770321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 149 - 257
Target Start/End: Original strand, 13637766 - 13637870
Alignment:
Q  149 tttgataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaaca 248  Q
    ||||||||| ||||| ||||||| |||||||||||| |||||||||||||||| |||||||||||||||    |  ||||||| |||||||||| |||||    
T  13637766 tttgataacggagataaaatgtgaggattttaaaaatatttaatgaaatgtagagactattcttcaaag----gggcgcaaaatgtaaggactagaaaca 13637861  T
Q  249 tatttaacc 257  Q
    |||||||||    
T  13637862 tatttaacc 13637870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 149 - 257
Target Start/End: Original strand, 44504372 - 44504476
Alignment:
Q  149 tttgataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaaca 248  Q
    ||||||||| ||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||||    |   |||||| ||||||||||||||||    
T  44504372 tttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtaaggactattcttcaaag----gggtgcaaaatgtaaggactaaaaaca 44504467  T
Q  249 tatttaacc 257  Q
     ||||||||    
T  44504468 catttaacc 44504476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 118 - 253
Target Start/End: Complemental strand, 50732361 - 50732229
Alignment:
Q  118 attccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaa 216  Q
    ||||| |||||||||||||| ||| ||||||||| |||||| ||||| ||||| | |||||||||||| ||||||||||||||| |||||||| ||||||    
T  50732361 attccattagagaattaacagcagggactaattttgataacggagataaaatgcgaggattttaaaaatatttaatgaaatgtatggactatttttcaaa 50732262  T
Q  217 ggatcgaacgcaaaacgtaaggactaaaaacatattt 253  Q
    |    || ||||||| |||||||  ||||||||||||    
T  50732261 g----gagcgcaaaatgtaaggataaaaaacatattt 50732229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 118 - 253
Target Start/End: Original strand, 50780494 - 50780626
Alignment:
Q  118 attccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaa 216  Q
    ||||| |||||||||||||| ||| ||||||||| |||||| ||||| ||||| | |||||||||||| ||||||||||||||| |||||||| ||||||    
T  50780494 attccattagagaattaacagcagggactaattttgataacggagataaaatgcgaggattttaaaaatatttaatgaaatgtatggactatttttcaaa 50780593  T
Q  217 ggatcgaacgcaaaacgtaaggactaaaaacatattt 253  Q
    |    || ||||||| |||||||  ||||||||||||    
T  50780594 g----gagcgcaaaatgtaaggataaaaaacatattt 50780626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 152 - 217
Target Start/End: Original strand, 51755903 - 51755968
Alignment:
Q  152 gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaag 217  Q
    |||||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  51755903 gataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaag 51755968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 166 - 257
Target Start/End: Original strand, 132062 - 132149
Alignment:
Q  166 aatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||||    ||  |||||| |||||||||||| ||||||||||||    
T  132062 aatgtgaggattttaaaaacatttaatgaaatgtaaggactattcttcaaag----gagtgcaaaatgtaaggactaaatacatatttaacc 132149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 100 - 254
Target Start/End: Complemental strand, 37172235 - 37172084
Alignment:
Q  100 actaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatg 198  Q
    |||||||  |||||||| |||||||| |||||||  || | | ||||||||| |||||| ||||| || |||| ||||||||||||||||||||||||||    
T  37172235 actaactgccacatcaacattccgttggagaattttcagccgggactaattttgataacggagataaactgtgaggattttaaaaacatttaatgaaatg 37172136  T
Q  199 tagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatattta 254  Q
    ||| |||||||||| |||      | ||||||| |||||||||||||| |||||||    
T  37172135 tagagactattctttaaa----taagcgcaaaatgtaaggactaaaaaaatattta 37172084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 119 - 257
Target Start/End: Original strand, 37172431 - 37172566
Alignment:
Q  119 ttccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaag 217  Q
    ||||||||||||||||||| ||  ||||||||| ||||| |||||| |||||||  ||||||||||||||||||| || |||||| | ||||||||||||    
T  37172431 ttccgttagagaattaacagcatggactaattttgataatagagataaaatgtggagattttaaaaacatttaataaagtgtaggaattattcttcaaag 37172530  T
Q  218 gatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
        | ||| |||||| ||||| |||||| ||||||||||    
T  37172531 ----ggacgtaaaacgcaaggattaaaaatatatttaacc 37172566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 120 - 257
Target Start/End: Original strand, 34743426 - 34743560
Alignment:
Q  120 tccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaagg 218  Q
    ||||||| |||||||||  ||||||||||||| ||||||| | || ||||||| ||||||| |||||||||||||||||||| |||  ||||||||||||    
T  34743426 tccgttaaagaattaaccgcagagactaattttgataacatatataaaatgtgaggatttttaaaacatttaatgaaatgtaaggataattcttcaaagg 34743525  T
Q  219 atcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
         |||||||  |||||||||| | ||||||||||||    
T  34743526 g----acgcaaagtgtaaggactagatacatatttaacc 34743560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 149 - 256
Target Start/End: Original strand, 43933714 - 43933816
Alignment:
Q  149 tttgataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaaca 248  Q
    ||||||||||||||| |||| || |||||||||||||||||||||||| |||| ||||||| ||||||     | |||||||| || |||||||||||||    
T  43933714 tttgataacagagataaaatatgaggattttaaaaacatttaatgaaa-gtagagactatttttcaaa----tggacgcaaaatgtgaggactaaaaaca 43933808  T
Q  249 tatttaac 256  Q
    ||||||||    
T  43933809 tatttaac 43933816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 38485840 - 38485733
Alignment:
Q  110 acatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactat 208  Q
    ||||||| ||||||||| |||||||||| || |||||||||| |||||| ||||  |||||   ||||||||||||||| |||| ||||||| |||||||    
T  38485840 acatcaacattccgttaaagaattaacagcaaagactaattttgataacggagaa-aaatgcaaggattttaaaaacatataataaaatgtatggactat 38485742  T
Q  209 tcttcaaag 217  Q
    |||||||||    
T  38485741 tcttcaaag 38485733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 147 - 219
Target Start/End: Complemental strand, 33225594 - 33225522
Alignment:
Q  147 aatttgataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaagga 219  Q
    |||||| ||||||| || ||||||| |||||||||||||||||| | ||||||||||||||||  ||||||||    
T  33225594 aatttggtaacagatataaaatgtggggattttaaaaacatttacttaaatgtagggactatttatcaaagga 33225522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 258
Target Start/End: Complemental strand, 25770574 - 25770493
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacct 258  Q
    |||||||||||||||||| |||||||||  ||||||| ||||||  |||  |||||||| ||||||| ||||||||||||||||||    
T  25770574 ggattttaaaaacatttattgaaatgtaaagactatttttcaaa--atc--acgcaaaatgtaaggattaaaaacatatttaacct 25770493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 257
Target Start/End: Original strand, 45728335 - 45728407
Alignment:
Q  181 aaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||| ||||||||||||||| ||||||||||||||||    | || ||||| |||||||||||||||||||||||||    
T  45728335 aaaatatttaatgaaatgtatggactattcttcaaag----ggacacaaaatgtaaggactaaaaacatatttaacc 45728407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 257
Target Start/End: Original strand, 48868597 - 48868677
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||||||||||||||||| |||||||||||||||||| |||||||     | ||||||| ||| ||||||| |||||||||||||    
T  48868597 ggattttaaaaacatttattgaaatgtagggactattattcaaag----tagcgcaaaatgtagggactaataacatatttaacc 48868677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 173 - 257
Target Start/End: Original strand, 4199896 - 4199975
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||||||||||||||||| ||||||||||||||||||| |||||  ||||  ||||||| ||| |||| ||||||||||||||||    
T  4199896 ggattttaaaaacatttattgaaatgtagggactattc-tcaaa--atcg--cgcaaaatgtagggaccaaaaacatatttaacc 4199975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 198
Target Start/End: Complemental strand, 13637631 - 13637530
Alignment:
Q  98 ccactaactagcacatcaatattccgttagagaattaacatcagagactaa-tttgataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 196  Q
    |||||||||  |||||||| |||||||||||||||||||   | ||||||| |||||||||  |||| |||| ||  ||||||||||| |||||||||||    
T  13637631 ccactaactgccacatcaacattccgttagagaattaacggtaaagactaattttgataacgaagataaaatatgaagattttaaaaatatttaatgaaa 13637532  T
Q  197 tg 198  Q
    ||    
T  13637531 tg 13637530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 255
Target Start/End: Original strand, 25770728 - 25770804
Alignment:
Q  175 attttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaa 255  Q
    |||||||||||||||||| ||||||||| |||||||||||||     ||  |||||| ||||||| |||||||||||||||    
T  25770728 attttaaaaacatttaataaaatgtaggaactattcttcaaa----tgagtgcaaaatgtaaggattaaaaacatatttaa 25770804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 212
Target Start/End: Complemental strand, 45539288 - 45539249
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattctt 212  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  45539288 ggattttaaaaacatttattgaaatgtagggactattctt 45539249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 212
Target Start/End: Original strand, 45539650 - 45539689
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattctt 212  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  45539650 ggattttaaaaacatttattgaaatgtagggactattctt 45539689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 257
Target Start/End: Complemental strand, 27475469 - 27475390
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||||||||||||||| | ||||||||||||||||||| |||||  ||||  ||||||| ||| |||| ||||||||||||||||    
T  27475469 ggattttaaaaacattcattgaaatgtagggactattc-tcaaa--atcg--cgcaaaatgtagggaccaaaaacatatttaacc 27475390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 257
Target Start/End: Complemental strand, 34949835 - 34949756
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||||||||||||||| | ||||||||||||||||||| |||||  ||||  ||||||| ||| |||| ||||||||||||||||    
T  34949835 ggattttaaaaacattcattgaaatgtagggactattc-tcaaa--atcg--cgcaaaatgtagggaccaaaaacatatttaacc 34949756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 211
Target Start/End: Complemental strand, 36899333 - 36899295
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattct 211  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  36899333 ggattttaaaaacatttattgaaatgtagggactattct 36899295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 211
Target Start/End: Original strand, 36899695 - 36899733
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattct 211  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  36899695 ggattttaaaaacatttattgaaatgtagggactattct 36899733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 211
Target Start/End: Complemental strand, 42606359 - 42606321
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattct 211  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  42606359 ggattttaaaaacatttattgaaatgtagggactattct 42606321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 211
Target Start/End: Complemental strand, 46689761 - 46689723
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattct 211  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  46689761 ggattttaaaaacatttattgaaatgtagggactattct 46689723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 54588535 - 54588493
Alignment:
Q  175 attttaaaaacatttaatgaaatgtagggactattcttcaaag 217  Q
    |||||||||||||||| ||||||||| ||||||||||||||||    
T  54588535 attttaaaaacatttattgaaatgtatggactattcttcaaag 54588493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 256
Target Start/End: Complemental strand, 27013657 - 27013583
Alignment:
Q  178 ttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaac 256  Q
    |||||||||| || | ||||||| |||||||||||||||  |||  |||||||| |||||||| |||||||||||||||    
T  27013657 ttaaaaacatatattaaaatgtaaggactattcttcaaa--atc--acgcaaaatgtaaggaccaaaaacatatttaac 27013583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 256
Target Start/End: Original strand, 33226906 - 33227011
Alignment:
Q  147 aatttgataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaa 246  Q
    ||||||||| |||| || |||| ||  ||||||||||||||||| | |||| |||||||||||  ||||||    || ||||||| ||| ||||||| ||    
T  33226906 aatttgatagcagatataaaatttggagattttaaaaacatttacttaaatatagggactatttatcaaag----gagcgcaaaatgtagggactaagaa 33227001  T
Q  247 catatttaac 256  Q
    ||||||||||    
T  33227002 catatttaac 33227011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 173 - 257
Target Start/End: Complemental strand, 48867730 - 48867650
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||||||||||| ||||| |||||||||||||||||| || ||||     | ||||||| ||| ||||||| |||||||||||||    
T  48867730 ggattttaaaaatatttattgaaatgtagggactattatttaaag----tagcgcaaaatgtagggactaataacatatttaacc 48867650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 211
Target Start/End: Complemental strand, 2388711 - 2388673
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattct 211  Q
    |||||||||||||||||| |||||||||| |||||||||    
T  2388711 ggattttaaaaacatttattgaaatgtagagactattct 2388673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 211
Target Start/End: Original strand, 2389073 - 2389111
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattct 211  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  2389073 ggattttaaaaacatttattaaaatgtagggactattct 2389111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 257
Target Start/End: Original strand, 22407284 - 22407363
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||||||||||||||| | |||||||||||||||||| ||||||  || |  ||||||| ||| |||| ||||||||||||||||    
T  22407284 ggattttaaaaacattcattgaaatgtagggactatt-ttcaaa--attg--cgcaaaatgtagggaccaaaaacatatttaacc 22407363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 211
Target Start/End: Original strand, 42606721 - 42606759
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattct 211  Q
    |||||||||||| ||||| ||||||||||||||||||||    
T  42606721 ggattttaaaaatatttattgaaatgtagggactattct 42606759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 211
Target Start/End: Original strand, 46690123 - 46690161
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattct 211  Q
    |||||||||||||||||| ||||||||||||| ||||||    
T  46690123 ggattttaaaaacatttattgaaatgtagggattattct 46690161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 209
Target Start/End: Complemental strand, 20826808 - 20826772
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactatt 209  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  20826808 ggattttaaaaacatttattgaaatgtaaggactatt 20826772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 209
Target Start/End: Original strand, 20831111 - 20831147
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactatt 209  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  20831111 ggattttaaaaacatttattgaaatgtaaggactatt 20831147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 7e-40; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 98 - 249
Target Start/End: Original strand, 22948812 - 22948960
Alignment:
Q  98 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 196  Q
    |||||||||  ||||||||||||||||||||| |||||||  |||||||||||| |||||| ||||| ||||||| ||||||||||||||||||||||||    
T  22948812 ccactaactgccacatcaatattccgttagagcattaacaatagagactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaa 22948911  T
Q  197 tgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacat 249  Q
    ||||| |||||||||||||||| |    ||||||| |||||||||||||||||    
T  22948912 tgtagagactattcttcaaagggt----cgcaaaatgtaaggactaaaaacat 22948960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 98 - 264
Target Start/End: Complemental strand, 32092384 - 32092221
Alignment:
Q  98 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 196  Q
    |||||||||  ||||||| |||||||||| |||||||||| || |||||||||| ||||||| | |  ||||||| ||||||||||||||||||||||||    
T  32092384 ccactaactgccacatcagtattccgttatagaattaacaacaaagactaattttgataacaaacacaaaatgtgaggattttaaaaacatttaatgaaa 32092285  T
Q  197 tgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacctataaaa 264  Q
    || ||||||||||||||||||       ||||||| ||||||||||||||||||||||||| ||||||    
T  32092284 tgcagggactattcttcaaag----aggcgcaaaatgtaaggactaaaaacatatttaacccataaaa 32092221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 118 - 255
Target Start/End: Complemental strand, 11974800 - 11974666
Alignment:
Q  118 attccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaa 216  Q
    |||||||||||||||||||| || |||||||||| ||||||  |||| ||||||| ||||||||||||||||||||||||||||  ||||||| ||||||    
T  11974800 attccgttagagaattaacaacaaagactaattttgataacgaagataaaatgtgaggattttaaaaacatttaatgaaatgtacagactatttttcaaa 11974701  T
Q  217 ggatcgaacgcaaaacgtaaggactaaaaacatatttaa 255  Q
    |    || ||||||| ||||||||||||| |||||||||    
T  11974700 g----gagcgcaaaatgtaaggactaaaatcatatttaa 11974666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 98 - 218
Target Start/End: Complemental strand, 20544067 - 20543946
Alignment:
Q  98 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 196  Q
    |||||||||| |||||||  ||  |||||||||||||||| |||| |||||||| |||||| ||||| |||| || |||||||||||| |||||||||||    
T  20544067 ccactaactatcacatcaccatctcgttagagaattaacagcagaaactaattttgataacggagataaaatatgaggattttaaaaaaatttaatgaaa 20543968  T
Q  197 tgtagggactattcttcaaagg 218  Q
    ||||||||||||||||||||||    
T  20543967 tgtagggactattcttcaaagg 20543946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 98 - 257
Target Start/End: Complemental strand, 18152912 - 18152756
Alignment:
Q  98 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 196  Q
    |||||||||  |||||||  |||||||||||||||||||| ||||  ||||||| |||||| ||||| ||||||| ||||||||| |||||||||  |||    
T  18152912 ccactaactgtcacatcagcattccgttagagaattaacaacagaagctaattttgataacggagataaaatgtgaggattttaagaacatttaacaaaa 18152813  T
Q  197 tgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||||||||||||||||||||    |  ||||||| ||||| ||| |||||||||||||||    
T  18152812 tgtagggactattcttcaaag----gggcgcaaaatgtaagaactgaaaacatatttaacc 18152756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 98 - 256
Target Start/End: Complemental strand, 28838508 - 28838356
Alignment:
Q  98 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 196  Q
    |||||||||  |||||||  ||| |||||||||||||||| ||  ||||||||| |||||| ||||| ||||||| ||||||||||||||||||||||||    
T  28838508 ccactaactgccacatcagcatttcgttagagaattaacaccaatgactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaa 28838409  T
Q  197 tgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaac 256  Q
    ||| |||||  |||||||||||     || ||||| |||| |||||||||||||||||||    
T  28838408 tgtcgggac--ttcttcaaagg-----acacaaaatgtaaagactaaaaacatatttaac 28838356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 118 - 257
Target Start/End: Original strand, 17075571 - 17075707
Alignment:
Q  118 attccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaa 216  Q
    |||||||||||||||||| | ||  ||||||||| ||||   ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  17075571 attccgttagagaattaatagcaaggactaattttgatagtggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaa 17075670  T
Q  217 ggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |       ||||||| |||||||||||||| ||||||||||    
T  17075671 g----aggcgcaaaatgtaaggactaaaaagatatttaacc 17075707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 109 - 256
Target Start/End: Original strand, 44803577 - 44803721
Alignment:
Q  109 cacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggacta 207  Q
    |||||||| ||||||||||| ||| | || ||  ||||||||| |||||| ||||| ||||||| | ||||||||||||||||||||||||||| |||||    
T  44803577 cacatcaacattccgttagaaaatgatcagcatggactaattttgataacggagataaaatgtgagaattttaaaaacatttaatgaaatgtagagacta 44803676  T
Q  208 ttcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaac 256  Q
    ||||| ||||     | ||||||| ||||||||||||||||||||||||    
T  44803677 ttctttaaag----aagcgcaaaatgtaaggactaaaaacatatttaac 44803721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 98 - 257
Target Start/End: Complemental strand, 17075375 - 17075219
Alignment:
Q  98 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 196  Q
    |||||||||  |||||||  ||||||||| |||||||||  ||  ||||||||| | |||| | ||| ||||||| ||||||||||||| ||||||||||    
T  17075375 ccactaactgccacatcagcattccgttaaagaattaacggcaaggactaattttgttaacggggataaaatgtgaggattttaaaaacttttaatgaaa 17075276  T
Q  197 tgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||||||||||||||||||||   ||  |||||||  ||||||||||||||||||||||||    
T  17075275 tgtagggactattcttcaaag---cg-gcgcaaaatataaggactaaaaacatatttaacc 17075219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 118 - 257
Target Start/End: Complemental strand, 28852829 - 28852693
Alignment:
Q  118 attccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaa 216  Q
    ||||| |||||||||||||| ||||| ||||||| |||||| | ||| ||||||| |||||||||||||||||||||||||||||||| |||| || |||    
T  28852829 attcccttagagaattaacaacagaggctaattttgataacggggataaaatgtgaggattttaaaaacatttaatgaaatgtagggagtattatttaaa 28852730  T
Q  217 ggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
         | || ||||| ||||||| |||||||||||||||||    
T  28852729 ----tggacacaaaatgtaaggattaaaaacatatttaacc 28852693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 109 - 257
Target Start/End: Original strand, 10466724 - 10466869
Alignment:
Q  109 cacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggacta 207  Q
    |||||||| |||||||||||||||||| | || | |||||||| |||||  ||||| |||||||  ||||||||||||||||||| |||| ||| |||||    
T  10466724 cacatcaacattccgttagagaattaatagcataaactaattttgataatggagataaaatgtgacgattttaaaaacatttaataaaatatagagacta 10466823  T
Q  208 ttcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    ||||||||   || | |||||||| |||| || |||||||||||||||||    
T  10466824 ttcttcaa---atag-acgcaaaatgtaaagattaaaaacatatttaacc 10466869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 98 - 256
Target Start/End: Original strand, 5029688 - 5029842
Alignment:
Q  98 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 196  Q
    |||||||||  |||||||  |||| |||||| |||||||| ||  ||||||||| |||| | ||||| ||||||| |||||| |||||||||||||||||    
T  5029688 ccactaactgccacatcagcattctgttagataattaacaacatggactaattttgatagcggagataaaatgtgaggattt-aaaaacatttaatgaaa 5029786  T
Q  197 tgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaac 256  Q
    | |||||||||||||||||||      |||||||| |||| ||||||||| |||||||||    
T  5029787 tatagggactattcttcaaag----agacgcaaaatgtaacgactaaaaatatatttaac 5029842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 153 - 218
Target Start/End: Original strand, 42750108 - 42750173
Alignment:
Q  153 ataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaagg 218  Q
    ||||| ||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  42750108 ataacggagataaaatgtgaggattttaaaaacgtttaatgaaatgtagggactattcttcaaagg 42750173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 124 - 219
Target Start/End: Original strand, 11975023 - 11975119
Alignment:
Q  124 ttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaagga 219  Q
    |||||||||||||| ||||||||||||| |||||| || || ||||||| |||||||||||||||||||| ||| |||  ||||||| |||||||||    
T  11975023 ttagagaattaacaacagagactaattttgataacggaaataaaatgtgaggattttaaaaacatttaataaaacgtaaagactatttttcaaagga 11975119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 98 - 216
Target Start/End: Original strand, 20544245 - 20544363
Alignment:
Q  98 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 196  Q
    |||||||||  |||||||| ||| |||||||||||||| | ||  |||| |||| ||||||  |||| ||||||| | ||||||||||||||||||||||    
T  20544245 ccactaactgccacatcaacattacgttagagaattaatagcaacgactgattttgataacgaagataaaatgtgag-attttaaaaacatttaatgaaa 20544343  T
Q  197 tgtagggactattcttcaaa 216  Q
    |||| |||||||||||||||    
T  20544344 tgtaaggactattcttcaaa 20544363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 109 - 190
Target Start/End: Complemental strand, 23548752 - 23548670
Alignment:
Q  109 cacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacattta 190  Q
    |||||||  |||||||||||||||||||| || |||||||||| |||||||||||| ||||||| | ||||||||||||||||    
T  23548752 cacatcagcattccgttagagaattaacaacaaagactaattttgataacagagataaaatgtgagtattttaaaaacattta 23548670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 140 - 205
Target Start/End: Original strand, 32092505 - 32092571
Alignment:
Q  140 agagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggac 205  Q
    |||||||||||| |||||| ||||| ||||||| |||||||||||||||||||||||||||||||||    
T  32092505 agagactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggac 32092571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 218
Target Start/End: Original strand, 6621113 - 6621170
Alignment:
Q  160 agatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaagg 218  Q
    |||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  6621113 agataaaatgtgaggattttaaaa-catttaatgaaatgtagggactattcttcaaagg 6621170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 257
Target Start/End: Original strand, 18443619 - 18443698
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||||||||||||||||| ||||||||||||||||||| |||||  ||||  ||||||| |||||||| ||||||||||||||||    
T  18443619 ggattttaaaaacatttattgaaatgtagggactattc-tcaaa--atcg--cgcaaaatgtaaggaccaaaaacatatttaacc 18443698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 147 - 257
Target Start/End: Original strand, 12933045 - 12933151
Alignment:
Q  147 aatttgataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaa 246  Q
    |||||| ||||||| || ||||||| |||||||| ||||||||| | |||| |||||||||||  ||||||    |||| ||||| ||| ||||||||||    
T  12933045 aatttggtaacagatataaaatgtgaggattttagaaacatttacttaaatatagggactatttatcaaag----gaacacaaaatgtagggactaaaaa 12933140  T
Q  247 catatttaacc 257  Q
    |||||||||||    
T  12933141 catatttaacc 12933151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 109 - 197
Target Start/End: Complemental strand, 44803471 - 44803382
Alignment:
Q  109 cacatcaatattccgttagagaattaacatcagagactaa-tttgataacagagatcaaatgtgtggattttaaaaacatttaatgaaat 197  Q
    |||||||| ||| |||||||||||||||| |||||||||| ||||||| ||||||| |||| |  |||||||||||| ||||||| ||||    
T  44803471 cacatcaacatttcgttagagaattaacaacagagactaattttgatagcagagataaaatataaggattttaaaaatatttaataaaat 44803382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 212
Target Start/End: Complemental strand, 28854781 - 28854718
Alignment:
Q  149 tttgataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattctt 212  Q
    ||||||||| || || ||||||| |||||||||||||||||||| ||||||||||| |||||||    
T  28854781 tttgataactgaaataaaatgtgaggattttaaaaacatttaataaaatgtagggagtattctt 28854718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 27311060 - 27311102
Alignment:
Q  175 attttaaaaacatttaatgaaatgtagggactattcttcaaag 217  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  27311060 attttaaaaacatttaatgaaatgtagggactattctttaaag 27311102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 173 - 257
Target Start/End: Original strand, 30939574 - 30939654
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||||||||||| |||||||||||||||||||||||||||| ||  || |  || |||| ||| |||||||||||||||||||||    
T  30939574 ggattttaaaaatatttaatgaaatgtagggactattcttcgaa--atgg--cgtaaaatgtagggactaaaaacatatttaacc 30939654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 109 - 217
Target Start/End: Original strand, 49053825 - 49053935
Alignment:
Q  109 cacatcaatattccgttagagaattaacatcagagactaattt-gataac-agagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggact 206  Q
    |||||||| |||||||||||| ||||| | || |||||||||| |||||  | | || ||| ||| ||||||||||||| |||||||||||||||||| |    
T  49053825 cacatcaacattccgttagagcattaatagcatagactaattttgataatgaaaaataaaacgtgaggattttaaaaacttttaatgaaatgtagggatt 49053924  T
Q  207 attcttcaaag 217  Q
    ||| |||||||    
T  49053925 atttttcaaag 49053935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 27310127 - 27310087
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattcttc 213  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  27310127 ggattttaaaaacatttaatgaaatgtagggaccattcttc 27310087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 257
Target Start/End: Original strand, 1244453 - 1244532
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||||||||||||||| | ||||||||||||||||||| |||||  ||||  ||||||| ||| |||| ||||||||||||||||    
T  1244453 ggattttaaaaacattcattgaaatgtagggactattc-tcaaa--atcg--cgcaaaatgtagggaccaaaaacatatttaacc 1244532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 257
Target Start/End: Complemental strand, 28898108 - 28898029
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||||||||||||||| | ||||||||||||||||||| |||||  ||||  ||||||| ||| |||| ||||||||||||||||    
T  28898108 ggattttaaaaacattcattgaaatgtagggactattc-tcaaa--atcg--cgcaaaatgtagggaccaaaaacatatttaacc 28898029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 257
Target Start/End: Original strand, 41298686 - 41298765
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||||||||||||||| | ||||||||||||||||||| |||||  ||||  ||||||| ||| |||| ||||||||||||||||    
T  41298686 ggattttaaaaacattcattgaaatgtagggactattc-tcaaa--atcg--cgcaaaatgtagggaccaaaaacatatttaacc 41298765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 173 - 260
Target Start/End: Complemental strand, 18443255 - 18443173
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacctat 260  Q
    |||||||||||||||||| ||||||||| ||||||||| |||||  ||||   |||||| ||| |||| |||||||||||||||||||    
T  18443255 ggattttaaaaacatttattgaaatgtaaggactattc-tcaaa--atcg--tgcaaaatgtagggaccaaaaacatatttaacctat 18443173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 33848309 - 33848346
Alignment:
Q  175 attttaaaaacatttaatgaaatgtagggactattctt 212  Q
    |||||||||||||||| |||||||||||||||||||||    
T  33848309 attttaaaaacatttattgaaatgtagggactattctt 33848346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 217
Target Start/End: Original strand, 16755643 - 16755687
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattcttcaaag 217  Q
    |||||||||||| |||||||||||| ||| |||||||||||||||    
T  16755643 ggattttaaaaatatttaatgaaatatagagactattcttcaaag 16755687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 257
Target Start/End: Complemental strand, 29784012 - 29783935
Alignment:
Q  175 attttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||||||||||||||| |||||| |||||||||||| |||||  ||||  | ||||| ||| |||||||||||||||||||||    
T  29784012 attttaaaaacatttattgaaatatagggactattc-tcaaa--atcg--cacaaaatgtagggactaaaaacatatttaacc 29783935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 209
Target Start/End: Complemental strand, 12908475 - 12908425
Alignment:
Q  159 gagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactatt 209  Q
    ||||| ||||||| |||||||||||||||||| | ||||||||||| ||||    
T  12908475 gagataaaatgtgaggattttaaaaacatttagttaaatgtagggattatt 12908425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 211
Target Start/End: Complemental strand, 22954125 - 22954087
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattct 211  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  22954125 ggattttaaaaacatttattaaaatgtagggactattct 22954087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 211
Target Start/End: Complemental strand, 33847945 - 33847907
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattct 211  Q
    |||||||||||||||||| |||||||||| |||||||||    
T  33847945 ggattttaaaaacatttattgaaatgtagagactattct 33847907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 217
Target Start/End: Complemental strand, 10466695 - 10466651
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattcttcaaag 217  Q
    ||||| |||||||||||| ||||||||| |||||||| |||||||    
T  10466695 ggattataaaaacatttattgaaatgtaaggactatttttcaaag 10466651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 217
Target Start/End: Complemental strand, 11992794 - 11992750
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattcttcaaag 217  Q
    |||||||||||||||| ||| |||||||||||| |||||| ||||    
T  11992794 ggattttaaaaacattaaataaaatgtagggacaattctttaaag 11992750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 83; Significance: 3e-39; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 99 - 257
Target Start/End: Original strand, 21267303 - 21267458
Alignment:
Q  99 cactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaat 197  Q
    |||||||| ||||||||  ||||| |||||||||||||||||| ||||||||| |||||   | || ||||||| ||||||| |||||||||||||||||    
T  21267303 cactaactggcacatcagcattccattagagaattaacatcagtgactaattttgataatgaatataaaatgtgaggatttttaaaacatttaatgaaat 21267402  T
Q  198 gtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    ||||||||||||||||||||||||||    |||| |||||||||||||||||||||||||    
T  21267403 gtagggactattcttcaaaggatcga----aaaatgtaaggactaaaaacatatttaacc 21267458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 99 - 257
Target Start/End: Complemental strand, 21182462 - 21182307
Alignment:
Q  99 cactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaat 197  Q
    ||||||||  |||||||  ||| |||||||||||||||| ||||||||||||| |||||||||||| |||||||   |||||||||||||||||||||||    
T  21182462 cactaactgccacatcagcatttcgttagagaattaacaacagagactaattttgataacagagataaaatgtgaaaattttaaaaacatttaatgaaat 21182363  T
Q  198 gtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    ||| ||||||||||||||||    |  ||||||| |||||||||||||||||||||||||    
T  21182362 gtaaggactattcttcaaag----gggcgcaaaatgtaaggactaaaaacatatttaacc 21182307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 98 - 257
Target Start/End: Complemental strand, 2517569 - 2517413
Alignment:
Q  98 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 196  Q
    |||||||||  |||||||  ||||||||| ||| |||||| || |||||||||| |||||| ||||| ||||||| ||||||||||||||||||||||||    
T  2517569 ccactaactgccacatcagcattccgttaaagagttaacaacaaagactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaa 2517470  T
Q  197 tgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||||||||||||||||||||      |||||||| |||||||||||||| ||||||||||    
T  2517469 tgtagggactattcttcaaag----agacgcaaaatgtaaggactaaaaatatatttaacc 2517413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 98 - 257
Target Start/End: Complemental strand, 2191373 - 2191217
Alignment:
Q  98 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 196  Q
    |||||||||  ||||||| || | ||||| |||||||||| ||  ||||||||| |||||| ||||| ||||||| ||||||||||||||||||||||||    
T  2191373 ccactaactgccacatcagtagttcgttaaagaattaacaacatggactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaa 2191274  T
Q  197 tgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||| ||||||||||||||||    |  ||||||| |||||||||||||||||||||||||    
T  2191273 tgtaaggactattcttcaaag----gggcgcaaaatgtaaggactaaaaacatatttaacc 2191217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 98 - 257
Target Start/End: Original strand, 3691323 - 3691479
Alignment:
Q  98 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 196  Q
    |||||||||  |||||||| ||||||||||| |||||||| ||  ||||||||| |||||| ||||| |||||||  |||||||||||||||||||||||    
T  3691323 ccactaactgccacatcaacattccgttagaaaattaacagcatggactaattttgataacggagataaaatgtgaagattttaaaaacatttaatgaaa 3691422  T
Q  197 tgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||||||||||||||||||||    |  |||||||   |||||||||||||||||||||||    
T  3691423 tgtagggactattcttcaaag----gggcgcaaaatacaaggactaaaaacatatttaacc 3691479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 98 - 257
Target Start/End: Original strand, 21217255 - 21217411
Alignment:
Q  98 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 196  Q
    |||||||||  |||||||  ||||||||| |||||||||  ||| ||||||||| | |||| | ||| ||||||| ||||||||||||||||||||||||    
T  21217255 ccactaactgccacatcagcattccgttaaagaattaacggcagggactaattttgttaacggggataaaatgtgaggattttaaaaacatttaatgaaa 21217354  T
Q  197 tgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||||||||||||||||||||   ||  ||||||| |||||||||||||||||||||||||    
T  21217355 tgtagggactattcttcaaag---cg-gcgcaaaatgtaaggactaaaaacatatttaacc 21217411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 98 - 257
Target Start/End: Complemental strand, 21265147 - 21264991
Alignment:
Q  98 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 196  Q
    |||||||||  |||||||  ||||||||| |||||||||  ||| ||||||||| | |||| | ||| ||||||| ||||||||||||||||||||||||    
T  21265147 ccactaactgccacatcagcattccgttaaagaattaacggcagggactaattttgttaacggggataaaatgtgaggattttaaaaacatttaatgaaa 21265048  T
Q  197 tgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||||||||||||||||||||   ||  ||||||| |||||||||||||||||||||||||    
T  21265047 tgtagggactattcttcaaag---cg-gcgcaaaatgtaaggactaaaaacatatttaacc 21264991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 109 - 257
Target Start/End: Complemental strand, 32114310 - 32114166
Alignment:
Q  109 cacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggacta 207  Q
    |||||||| ||||||||||||||||||||  || ||||||||| |||| ||||||| ||||||| ||||||||||||||||||||  | |||||||||||    
T  32114310 cacatcaacattccgttagagaattaacagtagcgactaattttgatatcagagataaaatgtgaggattttaaaaacatttaatagattgtagggacta 32114211  T
Q  208 ttcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||||||||||      || |||| |||||||||||||||||||||||||    
T  32114210 ttcttcaaagg-----gcgtaaaatgtaaggactaaaaacatatttaacc 32114166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 118 - 257
Target Start/End: Complemental strand, 21217059 - 21216923
Alignment:
Q  118 attccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaa 216  Q
    |||||||||||||||||||| ||  ||||||||| ||||   ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  21217059 attccgttagagaattaacagcaaggactaattttgatagtggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaa 21216960  T
Q  217 ggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |       ||||||| |||||||||||||| ||||||||||    
T  21216959 g----aggcgcaaaatgtaaggactaaaaagatatttaacc 21216923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 118 - 257
Target Start/End: Original strand, 21265343 - 21265479
Alignment:
Q  118 attccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaa 216  Q
    |||||||||||||||||||| ||  ||||||||| ||||   ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  21265343 attccgttagagaattaacagcaaggactaattttgatagtggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaa 21265442  T
Q  217 ggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |       ||||||| |||||||||||||| ||||||||||    
T  21265443 g----aggcgcaaaatgtaaggactaaaaagatatttaacc 21265479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 100 - 257
Target Start/End: Complemental strand, 24093310 - 24093156
Alignment:
Q  100 actaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatg 198  Q
    |||||||  |||||||  |||||||||||||||||||| ||  |||| |||| ||||||  |||  | ||||| ||||||||||||||||||||||||||    
T  24093310 actaactgtcacatcagcattccgttagagaattaacaacatggactgattttgataacgaagagaagatgtgaggattttaaaaacatttaatgaaatg 24093211  T
Q  199 tagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||||||||||||||||||    |  ||||||  |||||||||||||||||||||||||    
T  24093210 tagggactattcttcaaag----gggcgcaaagtgtaaggactaaaaacatatttaacc 24093156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 99 - 254
Target Start/End: Complemental strand, 7083677 - 7083525
Alignment:
Q  99 cactaactagcacatcaatattccgttagagaattaacatcagagactaatttg-ataacagagatcaaatgtgtggattttaaaaacatttaatgaaat 197  Q
    ||||||||  |||||||  |||||||||||||||||||| |||| |||| |||  ||||  ||||| ||||||| |||||||||||| ||||||||||||    
T  7083677 cactaactgccacatcagcattccgttagagaattaacaacagatactattttttataagggagataaaatgtgaggattttaaaaaaatttaatgaaat 7083578  T
Q  198 gtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatattta 254  Q
    |||||||||||||||||||     | ||| |||| ||||||| ||||||||||||||    
T  7083577 gtagggactattcttcaaa----tggacgtaaaatgtaaggattaaaaacatattta 7083525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 121 - 216
Target Start/End: Complemental strand, 3691216 - 3691120
Alignment:
Q  121 ccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaa 216  Q
    ||||||||||||||||  ||| ||||||||| |||||| | ||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  3691216 ccgttagagaattaactgcagggactaattttgataacggtgataaaatgtgaggattttaaaaacatttaatgaaatgtaggaactattcttcaaa 3691120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 109 - 216
Target Start/End: Original strand, 39729551 - 39729659
Alignment:
Q  109 cacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggacta 207  Q
    ||||| || |||||||||||||||||||| || |||||||||| |||||| ||||| ||||||| |||||||||||| |||||||||||| ||  |||||    
T  39729551 cacattaacattccgttagagaattaacaacatagactaatttcgataacggagataaaatgtgaggattttaaaaatatttaatgaaatataaagacta 39729650  T
Q  208 ttcttcaaa 216  Q
    |||||||||    
T  39729651 ttcttcaaa 39729659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 99 - 218
Target Start/End: Original strand, 10706586 - 10706704
Alignment:
Q  99 cactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaat 197  Q
    ||||||||  |||||||| |||| ||||||||||||||| ||| ||||| ||| |||||| ||||| ||||||| |||||||||||| ||||||||||||    
T  10706586 cactaactgccacatcaacattctgttagagaattaacagcagggactagttttgataacggagataaaatgtgaggattttaaaaatatttaatgaaat 10706685  T
Q  198 gtagggactattcttcaaagg 218  Q
     ||  ||||||||||||||||    
T  10706686 ata--gactattcttcaaagg 10706704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 98 - 216
Target Start/End: Original strand, 24093490 - 24093609
Alignment:
Q  98 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 196  Q
    |||||||||| || |||| |||||||||| |||||||| | ||  ||||||||| |||||| ||||| ||||||  |||||||||||||||||||| |||    
T  24093490 ccactaactaccatatcagtattccgttaaagaattaagagcatggactaattttgataacggagataaaatgtaaggattttaaaaacatttaataaaa 24093589  T
Q  197 tgtagggactattcttcaaa 216  Q
    | |||| |||||||||||||    
T  24093590 tataggcactattcttcaaa 24093609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 212
Target Start/End: Original strand, 32114457 - 32114520
Alignment:
Q  149 tttgataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattctt 212  Q
    ||||||||||||||| || |||| | |||||||||| ||||||||||||||| |||||||||||    
T  32114457 tttgataacagagataaagtgtgagaattttaaaaatatttaatgaaatgtaaggactattctt 32114520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 3624925 - 3624967
Alignment:
Q  175 attttaaaaacatttaatgaaatgtagggactattcttcaaag 217  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  3624925 attttaaaaacatttattgaaatgtagggactattcttcaaag 3624967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 173 - 257
Target Start/End: Complemental strand, 10709555 - 10709475
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||||||||||||||||| ||||||||| |||||||||||||||  |||  ||||||||  ||| ||| ||||||||||||||||    
T  10709555 ggattttaaaaacatttattgaaatgtaaggactattcttcaaa--atc--acgcaaaatctaaagaccaaaaacatatttaacc 10709475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 99 - 202
Target Start/End: Original strand, 2606591 - 2606695
Alignment:
Q  99 cactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaat 197  Q
    ||||||||  |||||||  ||| ||||| |||||||||| ||  ||||||||| |||| | ||||| |||| || | |||||||||||||||||||||||    
T  2606591 cactaactgccacatcagcatttcgttaaagaattaacagcatggactaattttgatagcggagataaaatatgagaattttaaaaacatttaatgaaat 2606690  T
Q  198 gtagg 202  Q
    |||||    
T  2606691 gtagg 2606695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 257
Target Start/End: Complemental strand, 32860918 - 32860814
Alignment:
Q  149 tttgataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaaca 248  Q
    |||||| || ||||| ||||||  ||||||||||||||||||||||||| ||  ||||||| ||||||||     ||||||||  ||| | |||||||||    
T  32860918 tttgatcacggagataaaatgttaggattttaaaaacatttaatgaaatataacgactatttttcaaaggg----acgcaaaatataaaggctaaaaaca 32860823  T
Q  249 tatttaacc 257  Q
    |||||||||    
T  32860822 tatttaacc 32860814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 211
Target Start/End: Complemental strand, 1804311 - 1804273
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattct 211  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  1804311 ggattttaaaaacatttattgaaatgtagggactattct 1804273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 211
Target Start/End: Original strand, 1804673 - 1804711
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattct 211  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  1804673 ggattttaaaaacatttattgaaatgtagggactattct 1804711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 154 - 212
Target Start/End: Original strand, 2036594 - 2036652
Alignment:
Q  154 taacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattctt 212  Q
    |||||||||| |||| |  |||||||||||||||| | |||||||||||||||||||||    
T  2036594 taacagagataaaatatagggattttaaaaacattaattgaaatgtagggactattctt 2036652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 257
Target Start/End: Original strand, 3854508 - 3854587
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||||||||||||||| | ||||||||||||||||||| |||||  ||||  ||||||| ||| |||| ||||||||||||||||    
T  3854508 ggattttaaaaacattcattgaaatgtagggactattc-tcaaa--atcg--cgcaaaatgtagggaccaaaaacatatttaacc 3854587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 211
Target Start/End: Complemental strand, 6476166 - 6476128
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattct 211  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  6476166 ggattttaaaaacatttattgaaatgtagggactattct 6476128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 211
Target Start/End: Original strand, 6476528 - 6476566
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattct 211  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  6476528 ggattttaaaaacatttattgaaatgtagggactattct 6476566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 211
Target Start/End: Original strand, 11451197 - 11451235
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattct 211  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  11451197 ggattttaaaaacatttattgaaatgtagggactattct 11451235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 257
Target Start/End: Original strand, 23222865 - 23222953
Alignment:
Q  165 aaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    ||||||| ||||||||||||||| || ||||||||| |||||||| || ||||  | |  ||||||| ||| |||||||||||||||||||||    
T  23222865 aaatgtgaggattttaaaaacatatattgaaatgtaaggactattatttaaag--ttg--cgcaaaatgtagggactaaaaacatatttaacc 23222953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 211
Target Start/End: Complemental strand, 27377728 - 27377690
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattct 211  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  27377728 ggattttaaaaacatttattgaaatgtagggactattct 27377690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 211
Target Start/End: Complemental strand, 39096611 - 39096565
Alignment:
Q  165 aaatgtgtggattttaaaaacatttaatgaaatgtagggactattct 211  Q
    |||||| ||||||||||||||||||| ||||||||| ||||||||||    
T  39096611 aaatgtatggattttaaaaacatttattgaaatgtaaggactattct 39096565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 257
Target Start/End: Original strand, 39947096 - 39947176
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||||||||||||||||| ||||||||| |||||||| |||||||  ||  || ||||| ||| |||| ||||||||||||||||    
T  39947096 ggattttaaaaacatttattgaaatgtaaggactattgttcaaag--tc--actcaaaatgtagggaccaaaaacatatttaacc 39947176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 217
Target Start/End: Complemental strand, 23221914 - 23221870
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattcttcaaag 217  Q
    |||| ||||||||||||| ||||||||||| ||||||||||||||    
T  23221914 ggatattaaaaacatttattgaaatgtaggtactattcttcaaag 23221870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 217
Target Start/End: Complemental strand, 39945922 - 39945878
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattcttcaaag 217  Q
    |||||||||||||||||| ||||||||| |||||||| |||||||    
T  39945922 ggattttaaaaacatttattgaaatgtaaggactattgttcaaag 39945878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 98 - 137
Target Start/End: Original strand, 32861147 - 32861186
Alignment:
Q  98 ccactaactagcacatcaatattccgttagagaattaaca 137  Q
    |||||||||  |||||||||||||||||||||||||||||    
T  32861147 ccactaactgccacatcaatattccgttagagaattaaca 32861186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 212
Target Start/End: Complemental strand, 2035707 - 2035649
Alignment:
Q  154 taacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattctt 212  Q
    |||| ||||| ||||||  |||||||||||||||||| | ||||||||||| |||||||    
T  2035707 taacggagataaaatgtagggattttaaaaacatttattaaaatgtagggattattctt 2035649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 256
Target Start/End: Original strand, 2606695 - 2606729
Alignment:
Q  222 gaacgcaaaacgtaaggactaaaaacatatttaac 256  Q
    |||||||||| ||||||||||||||||||||||||    
T  2606695 gaacgcaaaatgtaaggactaaaaacatatttaac 2606729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 211
Target Start/End: Original strand, 12090136 - 12090174
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattct 211  Q
    |||||||||||||||| | ||||||||||||||||||||    
T  12090136 ggattttaaaaacattcattgaaatgtagggactattct 12090174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 257
Target Start/End: Original strand, 26525905 - 26525984
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||||||||||||||||| |||||| |||||||||||  |||||  ||||  ||||||| ||| |||| ||||||||||||||||    
T  26525905 ggattttaaaaacatttattgaaatatagggactatt-atcaaa--atcg--cgcaaaatgtagggaccaaaaacatatttaacc 26525984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 211
Target Start/End: Complemental strand, 34037888 - 34037850
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattct 211  Q
    |||||||||||||||| | ||||||||||||||||||||    
T  34037888 ggattttaaaaacattcattgaaatgtagggactattct 34037850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 18105794 - 18105753
Alignment:
Q  175 attttaaaaacatttaatgaaatgtagggactattcttcaaa 216  Q
    ||||||||||| |||| ||||||||||||| |||||||||||    
T  18105794 attttaaaaacctttattgaaatgtagggaatattcttcaaa 18105753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 217
Target Start/End: Complemental strand, 24093409 - 24093365
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattcttcaaag 217  Q
    |||||||||||||||||| ||||||| | |||||||| |||||||    
T  24093409 ggattttaaaaacatttattgaaatgcaaggactatttttcaaag 24093365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 31357556 - 31357600
Alignment:
Q  30 cccagtacaagcagatctccaaggtattgctagtaacatcaacat 74  Q
    |||| ||||||| ||||||||||||||| ||||||||| ||||||    
T  31357556 cccaatacaagcggatctccaaggtattactagtaacaacaacat 31357600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 217
Target Start/End: Original strand, 32861050 - 32861094
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattcttcaaag 217  Q
    |||||||||||||||||| |||||| || |||||||| |||||||    
T  32861050 ggattttaaaaacatttattgaaatataaggactatttttcaaag 32861094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 209
Target Start/End: Original strand, 44934693 - 44934729
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactatt 209  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  44934693 ggattttaaaaacatttattgaaatgtaaggactatt 44934729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 76; Significance: 4e-35; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 98 - 257
Target Start/End: Original strand, 26997803 - 26997959
Alignment:
Q  98 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 196  Q
    |||||||||| |||||||  |||||||||||||||||||| ||| ||||||||| |||||| ||||| ||||||| |||||||||||| | |||||||||    
T  26997803 ccactaactaccacatcagcattccgttagagaattaacagcagggactaattttgataacggagataaaatgtgaggattttaaaaataattaatgaaa 26997902  T
Q  197 tgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||| |||||||||||||||     | |||||||| ||||| |||||||||||||||||||    
T  26997903 tgtatggactattcttcaaa----tggacgcaaaatgtaagaactaaaaacatatttaacc 26997959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 98 - 216
Target Start/End: Complemental strand, 12489384 - 12489265
Alignment:
Q  98 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 196  Q
    |||||||||| ||| |||  |||||||||||||||||||| ||||||||||||| ||||||| |||| ||||| | |||||||||||| |||||||||||    
T  12489384 ccactaactaccacgtcaccattccgttagagaattaacagcagagactaattttgataacaaagataaaatgcgaggattttaaaaatatttaatgaaa 12489285  T
Q  197 tgtagggactattcttcaaa 216  Q
    ||||||||||||||||||||    
T  12489284 tgtagggactattcttcaaa 12489265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 98 - 257
Target Start/End: Complemental strand, 13315358 - 13315202
Alignment:
Q  98 ccactaactagcacatcaatattccgttagagaattaacatcagagactaa-tttgataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 196  Q
    |||||||||  |||||||| ||||||||||||||||||||  |  | |||| ||||||||||||||| |||||||  |||||||||||||||||||||||    
T  13315358 ccactaactgccacatcaacattccgttagagaattaacaggaatggctaattttgataacagagataaaatgtgatgattttaaaaacatttaatgaaa 13315259  T
Q  197 tgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||||||||||||||| |||     |  ||||||| |||||||||||||||||||||||||    
T  13315258 tgtagggactattctttaaa----tgggcgcaaaatgtaaggactaaaaacatatttaacc 13315202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 98 - 257
Target Start/End: Original strand, 17915441 - 17915596
Alignment:
Q  98 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 196  Q
    |||||||||  ||||||||||||| |||| |||||||||| || |||||||||| |||||||||||| ||||||| |||||| ||||||||||||| |||    
T  17915441 ccactaactgccacatcaatattctgttaaagaattaacagcaaagactaattttgataacagagataaaatgtgaggatttaaaaaacatttaataaaa 17915540  T
Q  197 tgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||| ||| ||||||||||||    || | ||||| |||||||||||||||||||||||||    
T  17915541 tgtaagga-tattcttcaaag----gagcacaaaatgtaaggactaaaaacatatttaacc 17915596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 98 - 256
Target Start/End: Complemental strand, 6297618 - 6297463
Alignment:
Q  98 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 196  Q
    |||||||||  |||||||  |||||||| ||||||||||| ||  ||||||||| |||||||||||  ||||||| ||||||||||||||||||||||||    
T  6297618 ccactaactgccacatcagcattccgttggagaattaacagcaaggactaattttgataacagagagaaaatgtgaggattttaaaaacatttaatgaaa 6297519  T
Q  197 tgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaac 256  Q
    |||||| ||||||||||||||    |  ||||||| |||||||||||| |||||||||||    
T  6297518 tgtaggaactattcttcaaag----gggcgcaaaatgtaaggactaaagacatatttaac 6297463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 109 - 257
Target Start/End: Original strand, 6297980 - 6298125
Alignment:
Q  109 cacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggacta 207  Q
    |||||||  ||||||||||||||||||||  || ||||||||| |||||| || || ||||||| |||||||||||||||||||||||||||| ||||||    
T  6297980 cacatcagcattccgttagagaattaacaatagggactaattttgataacggaaataaaatgtgaggattttaaaaacatttaatgaaatgtaaggacta 6298079  T
Q  208 ttcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||||||||||   ||| |||||| ||||| |||||||||| ||||||||    
T  6298080 ttcttcaaagg---gaa-gcaaaatgtaagcactaaaaacacatttaacc 6298125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 98 - 257
Target Start/End: Complemental strand, 9800195 - 9800039
Alignment:
Q  98 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 196  Q
    |||||||||  |||||||  |||||||||||||||||||| || |||||||||| |||||| ||||| ||||||| |||||||||||||||||||| |||    
T  9800195 ccactaactgccacatcagcattccgttagagaattaacagcaaagactaattttgataacggagatgaaatgtgaggattttaaaaacatttaataaaa 9800096  T
Q  197 tgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||| ||| ||||||||||||       |||||||  ||||||||||||||||||||||||    
T  9800095 tgtaaggattattcttcaaag----aggcgcaaaatctaaggactaaaaacatatttaacc 9800039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 98 - 257
Target Start/End: Complemental strand, 16662324 - 16662168
Alignment:
Q  98 ccactaactagcacatcaatattccgttagagaattaacatcagagactaatttga-taacagagatcaaatgtgtggattttaaaaacatttaatgaaa 196  Q
    |||||||||  |||||||  ||| ||||||||||||||||  || ||||||||| | |||||||||| ||||||| | ||||||||||||||||||||||    
T  16662324 ccactaactgccacatcagcatttcgttagagaattaacagtagggactaattttaataacagagataaaatgtgagaattttaaaaacatttaatgaaa 16662225  T
Q  197 tgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||||||||||||||||||||    || ||||||| ||||| ||||||| |||| ||||||    
T  16662224 tgtagggactattcttcaaag----gagcgcaaaatgtaagaactaaaatcataattaacc 16662168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 109 - 254
Target Start/End: Original strand, 16662417 - 16662558
Alignment:
Q  109 cacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggacta 207  Q
    |||||||| |||||||||||||||||||| ||| || |||||| || ||| ||||| |||| || | |||||||||||||||||||||||||||| ||||    
T  16662417 cacatcaacattccgttagagaattaacaacagggattaattttgagaacggagat-aaatatgagaattttaaaaacatttaatgaaatgtaggaacta 16662515  T
Q  208 ttcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatattta 254  Q
    |||||||||     || ||||||| ||||||||||||||||||||||    
T  16662516 ttcttcaaa----agagcgcaaaatgtaaggactaaaaacatattta 16662558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 102 - 217
Target Start/End: Original strand, 6297800 - 6297916
Alignment:
Q  102 taactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgta 200  Q
    |||||| |||||||| ||||  ||||||||| |||| ||  ||||||||| |||||| ||||| ||||||| ||||||||||||||||||||||||||||    
T  6297800 taactaccacatcaacattctattagagaatcaacaacaaggactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgta 6297899  T
Q  201 gggactattcttcaaag 217  Q
     ||||||||||||||||    
T  6297900 aggactattcttcaaag 6297916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 109 - 257
Target Start/End: Complemental strand, 10047623 - 10047479
Alignment:
Q  109 cacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggacta 207  Q
    ||||||| | ||||||||||||||||||| ||  ||||||||| |||||| ||||| ||||||| | ||||||||||||||||||| |||||||||||||    
T  10047623 cacatcagtgttccgttagagaattaacagcatggactaattttgataacggagataaaatgtgagaattttaaaaacatttaatg-aatgtagggacta 10047525  T
Q  208 ttcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||||||||     |  ||||||| ||||||| |||||||||||||||||    
T  10047524 ttcttcaaa----agggcgcaaaatgtaaggattaaaaacatatttaacc 10047479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 149 - 257
Target Start/End: Complemental strand, 17914301 - 17914197
Alignment:
Q  149 tttgataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaaca 248  Q
    ||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||||      |||||||| |||| |||| ||||||    
T  17914301 tttgataacagagataaaatgtgaggattttaaaaacatttaataaaatgtagggactattcttcaaag----agacgcaaaatgtaaagacttaaaaca 17914206  T
Q  249 tatttaacc 257  Q
    |||||||||    
T  17914205 tatttaacc 17914197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 98 - 254
Target Start/End: Original strand, 26243329 - 26243482
Alignment:
Q  98 ccactaactagcacatcaatattccgttagagaattaacatcagagactaa-tttgataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 196  Q
    |||||||||  |||||||| ||||  |||||||||||||| |   ||| || ||||||||  ||||| ||||||| ||||||||||||||||||||||||    
T  26243329 ccactaactgtcacatcaacattcaattagagaattaacaccgtggacaaattttgataatggagataaaatgtgaggattttaaaaacatttaatgaaa 26243428  T
Q  197 tgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatattta 254  Q
    | ||| |||||||||||||||    || |||||||  |||||||||||||||||||||    
T  26243429 tatagagactattcttcaaag----gagcgcaaaatataaggactaaaaacatattta 26243482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 109 - 218
Target Start/End: Original strand, 9800288 - 9800398
Alignment:
Q  109 cacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggacta 207  Q
    |||||||| |||| ||||||||||||||| || | |||||||| ||||||  |||| ||||||  ||||||||||||||||||||||||| || ||||||    
T  9800288 cacatcaacattctgttagagaattaacagcataaactaattttgataacgaagataaaatgtaaggattttaaaaacatttaatgaaatatatggacta 9800387  T
Q  208 ttcttcaaagg 218  Q
    |||||||||||    
T  9800388 ttcttcaaagg 9800398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 99 - 216
Target Start/End: Complemental strand, 44024380 - 44024262
Alignment:
Q  99 cactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaat 197  Q
    ||||||||  |||||||| |||||||||||||||||||| ||  ||||||||| |||||| | ||| |||||||  ||||||||||||||||  ||||||    
T  44024380 cactaactgtcacatcaacattccgttagagaattaacaacattgactaattttgataacggggataaaatgtgatgattttaaaaacatttggtgaaat 44024281  T
Q  198 gtagggactattcttcaaa 216  Q
    ||| |||||||||||||||    
T  44024280 gtatggactattcttcaaa 44024262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 98 - 218
Target Start/End: Original strand, 21006056 - 21006177
Alignment:
Q  98 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 196  Q
    |||||||||  |||||||  ||| | |||||||||||||| ||| ||  ||||| |||||| ||||| ||||||| |||||||||||||||||||| |||    
T  21006056 ccactaactgccacatcagcatttcattagagaattaacagcagggatcaattttgataacggagataaaatgtgaggattttaaaaacatttaataaaa 21006155  T
Q  197 tgtagggactattcttcaaagg 218  Q
    ||||||||||||| ||||||||    
T  21006156 tgtagggactatttttcaaagg 21006177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 134 - 255
Target Start/End: Complemental strand, 26720441 - 26720323
Alignment:
Q  134 aacatcagagactaatt-tgataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaac 232  Q
    |||| |||||| ||||| || |||||||||  ||||||  |||||||||||| ||||||||||||||||||||||||||||||||    || |||||||     
T  26720441 aacagcagagattaattgtgttaacagagaaaaaatgtagggattttaaaaatatttaatgaaatgtagggactattcttcaaag----gagcgcaaaat 26720346  T
Q  233 gtaaggactaaaaacatatttaa 255  Q
    ||| |||||||||| ||||||||    
T  26720345 gtagggactaaaaatatatttaa 26720323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 153 - 257
Target Start/End: Original strand, 12489517 - 12489616
Alignment:
Q  153 ataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatt 252  Q
    ||||||||||| ||||||  |||||||||||||| ||||||||||||| |||||||||||||    | || |||||||| ||||||||||||||||||||    
T  12489517 ataacagagataaaatgtaaggattttaaaaaca-ttaatgaaatgtaaggactattcttca---taacg-acgcaaaatgtaaggactaaaaacatatt 12489611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 258
Target Start/End: Complemental strand, 44024478 - 44024397
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacct 258  Q
    |||||||||||| ||||| ||||||||| |||||||| |||||||  ||  |||||||| |||||||| |||||||||||||||||    
T  44024478 ggattttaaaaatatttattgaaatgtaaggactatttttcaaag--tc--acgcaaaatgtaaggaccaaaaacatatttaacct 44024397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 173 - 257
Target Start/End: Complemental strand, 29917184 - 29917105
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||||||||||||||||| ||||||||||||||||||| |||||  ||||  ||||||||||| |||  ||||||||||||||||    
T  29917184 ggattttaaaaacatttattgaaatgtagggactattc-tcaaa--atcg--cgcaaaacgtagggatcaaaaacatatttaacc 29917105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 256
Target Start/End: Complemental strand, 44148665 - 44148578
Alignment:
Q  165 aaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaac 256  Q
    ||||||| ||||||||||||| |||| | |||||||||||||||||||||||     || || |||| ||| ||||||||||||||||||||    
T  44148665 aaatgtgaggattttaaaaacgtttattaaaatgtagggactattcttcaaa----agagcgtaaaatgtagggactaaaaacatatttaac 44148578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 100 - 200
Target Start/End: Complemental strand, 39234990 - 39234889
Alignment:
Q  100 actaactagcacatcaatattccgttagagaattaacatcagagactaa-tttgataacagagatcaaatgtgtggattttaaaaacatttaatgaaatg 198  Q
    |||||||  |||||||  |||||||||||||||||||| ||  |||||| ||||||||| ||||| ||||||| | ||||| |||| ||||||| |||||    
T  39234990 actaactgtcacatcagcattccgttagagaattaacagcattgactaattttgataactgagataaaatgtgagaatttttaaaatatttaataaaatg 39234891  T
Q  199 ta 200  Q
    ||    
T  39234890 ta 39234889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 149 - 258
Target Start/End: Original strand, 7344842 - 7344947
Alignment:
Q  149 tttgataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaaca 248  Q
    ||||||||| || || |||| || ||||||||||||||| |||| ||||||| ||| ||||||||||||    |  | ||||| ||||||||||||||||    
T  7344842 tttgataacggacataaaatatgaggattttaaaaacatataataaaatgtatggattattcttcaaag----gggcacaaaatgtaaggactaaaaaca 7344937  T
Q  249 tatttaacct 258  Q
    ||| ||||||    
T  7344938 tatataacct 7344947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 173 - 258
Target Start/End: Original strand, 21005959 - 21006040
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacct 258  Q
    |||||||||||||||||| ||||||||| |||||||| |||||||      |||||||| ||| |||| |||||||||||||||||    
T  21005959 ggattttaaaaacatttattgaaatgtaaggactatttttcaaag----ccacgcaaaatgtagggaccaaaaacatatttaacct 21006040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 98 - 196
Target Start/End: Complemental strand, 21005878 - 21005779
Alignment:
Q  98 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 196  Q
    |||||||||  |||||||| ||| ||||||||||||||||  | ||| |||||| |||||| ||||| |||| ||  ||||||||||| |||||||||||    
T  21005878 ccactaactgccacatcaacatttcgttagagaattaacaggaaagaataattttgataacggagataaaatatgaagattttaaaaaaatttaatgaaa 21005779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 257
Target Start/End: Complemental strand, 4624613 - 4624533
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||||||||||||||||| |||||||||  |||||||||||||||  ||  | ||||||  ||||||| ||||||||||||||||    
T  4624613 ggattttaaaaacatttattgaaatgtaaagactattcttcaaag--tc--atgcaaaatataaggaccaaaaacatatttaacc 4624533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 219
Target Start/End: Original strand, 10047832 - 10047934
Alignment:
Q  118 attccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaa 216  Q
    ||||||||  |||||| |||||| |||||||||| |||||| ||||| |||| ||   |||||||||| ||||||||| || ||  ||||||||||||||    
T  10047832 attccgttgtagaattgacatcaaagactaattttgataacggagataaaatatgaaaattttaaaaatatttaatgatatataaagactattcttcaaa 10047931  T
Q  217 gga 219  Q
    |||    
T  10047932 gga 10047934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 147 - 257
Target Start/End: Complemental strand, 40304790 - 40304684
Alignment:
Q  147 aatttgataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaa 246  Q
    |||||| ||||||| || ||||||| |||||||||||| ||||| | ||||||| ||||||||  ||||||    ||  |||||| ||| ||||||||||    
T  40304790 aatttggtaacagatataaaatgtgaggattttaaaaatatttacttaaatgtatggactatttatcaaag----gagtgcaaaatgtagggactaaaaa 40304695  T
Q  247 catatttaacc 257  Q
     ||||||||||    
T  40304694 tatatttaacc 40304684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 257
Target Start/End: Original strand, 11089228 - 11089384
Alignment:
Q  98 ccactaactagcacatcaatattccgttagagaattaacatcagagactaatttga-taacagagatcaaa-tgtgtggattttaaaaacatttaatgaa 195  Q
    |||||||||  |||||||| ||| ||||||| |||||||| |||| |||||||| | |||||||| | ||| | || |||||||||||| |||||| |||    
T  11089228 ccactaactgtcacatcaacatttcgttagataattaacagcaga-actaattttaataacagagctaaaaatatgaggattttaaaaatatttaacgaa 11089326  T
Q  196 atgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||||  || ||||||| |||||| ||||    |||  |||| |||||||||||| ||||||    
T  11089327 atgtaatgattattctttaaaggagcgaa----aaatctaagaactaaaaacatacttaacc 11089384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 217
Target Start/End: Complemental strand, 36155351 - 36155307
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattcttcaaag 217  Q
    |||||||||||||||||| | |||||||||||||||| |||||||    
T  36155351 ggattttaaaaacatttattaaaatgtagggactattattcaaag 36155307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 174 - 217
Target Start/End: Complemental strand, 20682787 - 20682744
Alignment:
Q  174 gattttaaaaacatttaatgaaatgtagggactattcttcaaag 217  Q
    ||||||||||||||||| | ||||||| ||||||||||||||||    
T  20682787 gattttaaaaacatttattaaaatgtaaggactattcttcaaag 20682744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 165 - 257
Target Start/End: Original strand, 44803565 - 44803653
Alignment:
Q  165 aaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    ||||||| | ||||||||||| |||| | ||||||||||||||||  ||||||    || ||||||| ||| |||||||| ||||||||||||    
T  44803565 aaatgtgagaattttaaaaacttttacttaaatgtagggactatttatcaaag----gagcgcaaaatgtagggactaaacacatatttaacc 44803653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 211
Target Start/End: Original strand, 29917548 - 29917586
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattct 211  Q
    |||||||||||||||||| ||||||||| ||||||||||    
T  29917548 ggattttaaaaacatttattgaaatgtaaggactattct 29917586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 209
Target Start/End: Original strand, 4694442 - 4694478
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactatt 209  Q
    |||||||||||||||||| | ||||||||||||||||    
T  4694442 ggattttaaaaacatttacttaaatgtagggactatt 4694478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 211
Target Start/End: Complemental strand, 22601576 - 22601540
Alignment:
Q  175 attttaaaaacatttaatgaaatgtagggactattct 211  Q
    |||||||||||||||| | ||||||||||||||||||    
T  22601576 attttaaaaacatttatttaaatgtagggactattct 22601540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 211
Target Start/End: Complemental strand, 24846040 - 24846004
Alignment:
Q  175 attttaaaaacatttaatgaaatgtagggactattct 211  Q
    |||||||||||||||| ||||||||| ||||||||||    
T  24846040 attttaaaaacatttattgaaatgtaaggactattct 24846004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 70; Significance: 2e-31; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 98 - 255
Target Start/End: Original strand, 108056 - 108210
Alignment:
Q  98 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 196  Q
    |||||||||  |||||||  ||||| |||||||||||||| ||||||||||||| |||||| ||||| ||||||| ||||||||||||||||||||||||    
T  108056 ccactaactgccacatcagcattccattagagaattaacagcagagactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaa 108155  T
Q  197 tgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaa 255  Q
    |||||| |  ||||||||||     |  ||||||| |||||||||||||||||||||||    
T  108156 tgtaggaataattcttcaaa----agggcgcaaaatgtaaggactaaaaacatatttaa 108210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 98 - 257
Target Start/End: Complemental strand, 107878 - 107722
Alignment:
Q  98 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 196  Q
    |||||||||  |||||||  |||||||||||||||||||| ||  ||||| ||| |||||| ||||| ||||||| |||||||||||| ||||| |||||    
T  107878 ccactaactgtcacatcagcattccgttagagaattaacaacatggactatttttgataacggagataaaatgtgaggattttaaaaatatttattgaaa 107779  T
Q  197 tgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    ||||||||||||||||||||||| ||    ||||  |||||| ||||||||||||||||||    
T  107778 tgtagggactattcttcaaaggagcg----caaagtgtaaggtctaaaaacatatttaacc 107722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 258
Target Start/End: Complemental strand, 107974 - 107894
Alignment:
Q  174 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacct 258  Q
    ||||||||||||||||| ||||||||| |||||||| ||||||  |||  ||| |||| ||| |||| |||||||||||||||||    
T  107974 gattttaaaaacatttattgaaatgtaaggactatttttcaaa--atc--acggaaaatgtagggaccaaaaacatatttaacct 107894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 2e-31; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 99 - 257
Target Start/End: Original strand, 6751288 - 6751444
Alignment:
Q  99 cactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaat 197  Q
    ||||||||  |||||||| ||||| |||||||||||||| ||||||||||||| ||||||| |||| ||||||| |||||||||||| ||||||||||||    
T  6751288 cactaactgtcacatcaacattccattagagaattaacagcagagactaattttgataacaaagataaaatgtgaggattttaaaaaaatttaatgaaat 6751387  T
Q  198 gtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    ||| ||||| ||||| |||||   ||   ||||| |||| ||||||||||||||||||||    
T  6751388 gtaaggacttttctttaaagg---gacgccaaaatgtaatgactaaaaacatatttaacc 6751444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 99 - 257
Target Start/End: Complemental strand, 5172899 - 5172745
Alignment:
Q  99 cactaactagcacatcaatattccgttagagaattaacatcagagactaa-tttgataacagagatcaaatgtgtggattttaaaaacatttaatgaaat 197  Q
    ||||||||| |||||||| ||||  |||||||||||||| ||  |||||| |||||||||  |||| ||||||  |||||||||||||||||||||||||    
T  5172899 cactaacta-cacatcaacattctattagagaattaacaacaaggactaaatttgataacgtagataaaatgtaaggattttaaaaacatttaatgaaat 5172801  T
Q  198 gtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||| ||||||||||||||     || ||||||| ||||| |||||||||||||||||||    
T  5172800 gtagagactattcttcaaa----tgagcgcaaaatgtaagaactaaaaacatatttaacc 5172745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 128 - 257
Target Start/End: Complemental strand, 9880610 - 9880484
Alignment:
Q  128 agaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacg 226  Q
    |||||||||| ||| ||||||||| ||||||  |||| ||||||| ||||||||||||||||||||||||||||| |||| ||||||||||    | | |    
T  9880610 agaattaacaacagtgactaattttgataacgaagataaaatgtgaggattttaaaaacatttaatgaaatgtagagacttttcttcaaag----ggatg 9880515  T
Q  227 caaaacgtaaggactaaaaacatatttaacc 257  Q
    ||||| |||||||||||||||||||||||||    
T  9880514 caaaatgtaaggactaaaaacatatttaacc 9880484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 109 - 257
Target Start/End: Complemental strand, 19895545 - 19895400
Alignment:
Q  109 cacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggacta 207  Q
    |||||||  ||||||||| ||||||||||  | |||||||||| |||||| ||||| ||||||| || ||||||||||||||||| ||||||| ||||||    
T  19895545 cacatcagcattccgttaaagaattaacagtatagactaattttgataacggagataaaatgtgagggttttaaaaacatttaattaaatgtatggacta 19895446  T
Q  208 ttcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||||||||    ||| |  |||| |||||||||||||||||||||||||    
T  19895445 ttcttcaaa----cgagcataaaatgtaaggactaaaaacatatttaacc 19895400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 109 - 257
Target Start/End: Original strand, 31436328 - 31436473
Alignment:
Q  109 cacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggacta 207  Q
    |||||||  |||||||||||||||||||| ||||||||||||| |||||| ||||| |||||||   |||||||||||||||||| |||| ||| |||||    
T  31436328 cacatcatcattccgttagagaattaacagcagagactaattttgataacggagataaaatgtgataattttaaaaacatttaataaaatatagtgacta 31436427  T
Q  208 ttcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||||||||     | || ||||| ||||||||||||| |||||||||||    
T  31436428 ttcttcaaa----aggacacaaaatgtaaggactaaaatcatatttaacc 31436473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 98 - 257
Target Start/End: Original strand, 3591271 - 3591427
Alignment:
Q  98 ccactaactagcacatcaatattccgttagagaattaacatcagagactaatttg-ataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 196  Q
    |||||||||  |||||||  ||||||||||| |||| ||| ||| |||||||||  ||||  ||||| ||||||| |||||||||||||||||||| |||    
T  3591271 ccactaactgccacatcaggattccgttagataatttacagcagggactaatttttataatggagataaaatgtgaggattttaaaaacatttaataaaa 3591370  T
Q  197 tgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||| |||||||||||||||     || ||||||| |||||||||||||| ||||||||||    
T  3591371 tgtatggactattcttcaaa----tgagcgcaaaatgtaaggactaaaaatatatttaacc 3591427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 118 - 257
Target Start/End: Original strand, 9880744 - 9880880
Alignment:
Q  118 attccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaa 216  Q
    |||||||||||||||||||| ||| ||||||||| |||||||||||| ||||||| | |||||||||||||||||| |||| |||  |||||||||||||    
T  9880744 attccgttagagaattaacagcagggactaattttgataacagagataaaatgtgagaattttaaaaacatttaataaaatatagaaactattcttcaaa 9880843  T
Q  217 ggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
         || ||||||| ||||| | |||||||||||||||||    
T  9880844 ----tgagcgcaaaatgtaagaattaaaaacatatttaacc 9880880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 109 - 213
Target Start/End: Complemental strand, 50359269 - 50359165
Alignment:
Q  109 cacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggacta 207  Q
    |||||||| |||||||||||||||||||| ||||| ||||||| |||||| || || |||||||  ||||| ||||||||||||||||||||||||||||    
T  50359269 cacatcaacattccgttagagaattaacagcagag-ctaattttgataacggaaataaaatgtgaagatttaaaaaacatttaatgaaatgtagggacta 50359171  T
Q  208 ttcttc 213  Q
    ||||||    
T  50359170 ttcttc 50359165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 118 - 258
Target Start/End: Complemental strand, 5683297 - 5683160
Alignment:
Q  118 attccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaa 216  Q
    |||| ||||||||| ||||| ||| ||||||||| |||||   |||| ||||||| |||||||||| |||||||||||||||||||||||||| ||||||    
T  5683297 attctgttagagaaataacagcagggactaattttgataatgaagataaaatgtgaggattttaaatacatttaatgaaatgtagggactatttttcaaa 5683198  T
Q  217 ggatcgaacgcaaaacgtaaggactaaaaacatatttaacct 258  Q
    |      |||||||| ||||||| ||||||||||||||||||    
T  5683197 g----agacgcaaaatgtaaggattaaaaacatatttaacct 5683160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 118 - 217
Target Start/End: Original strand, 18180232 - 18180332
Alignment:
Q  118 attccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaa 216  Q
    |||||||||||||||||||| ||  ||||||||| |||||| ||||| |||| || |||||||||||||||||||| ||||||| |||||||||||||||    
T  18180232 attccgttagagaattaacaccactgactaattttgataacggagataaaatatgaggattttaaaaacatttaataaaatgtatggactattcttcaaa 18180331  T
Q  217 g 217  Q
    |    
T  18180332 g 18180332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 98 - 216
Target Start/End: Original strand, 5683495 - 5683614
Alignment:
Q  98 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 196  Q
    |||||||||  ||||| || ||||||||||| |||||||| ||| ||||||||| |||| | ||||| ||||  | |||||||||||| |||||||||||    
T  5683495 ccactaactgtcacattaacattccgttagaaaattaacagcagtgactaattttgataccggagataaaatacgaggattttaaaaatatttaatgaaa 5683594  T
Q  197 tgtagggactattcttcaaa 216  Q
    ||||||||||||||||||||    
T  5683595 tgtagggactattcttcaaa 5683614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 100 - 218
Target Start/End: Complemental strand, 47541672 - 47541553
Alignment:
Q  100 actaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatg 198  Q
    |||||||  |||||||  |||||||||||||||||||| ||| || |||||| |||||   | || ||||||| |||||||||||||||||||||||||     
T  47541672 actaactgccacatcagcattccgttagagaattaacaacagggattaattttgataatgaatataaaatgtgaggattttaaaaacatttaatgaaata 47541573  T
Q  199 tagggactattcttcaaagg 218  Q
    ||||||||||||||||||||    
T  47541572 tagggactattcttcaaagg 47541553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 12389531 - 12389461
Alignment:
Q  30 cccagtacaagcagatctccaaggtattgctagtaacatcaacattgaactttcttacggctttctaacca 100  Q
    |||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||    
T  12389531 cccaatacaagcagatctccaaggtatcactagtaacatcaacattgaactttcttacggctttcttacca 12389461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 99 - 216
Target Start/End: Original strand, 19895735 - 19895853
Alignment:
Q  99 cactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaat 197  Q
    ||||||||  |||||||| |||| ||||||||||||||| || |||||||||| ||||||  |||| |||| || | |||||||||||||||||| ||||    
T  19895735 cactaactgtcacatcaacattctgttagagaattaacaacaaagactaattttgataacgaagataaaatatgagaattttaaaaacatttaataaaat 19895834  T
Q  198 gtagggactattcttcaaa 216  Q
    |||| ||||||||||||||    
T  19895835 gtagagactattcttcaaa 19895853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 118 - 256
Target Start/End: Original strand, 48155233 - 48155368
Alignment:
Q  118 attccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaa 216  Q
    ||||||||| |||||||||| ||  ||||||||| ||||||| |||| |||||||  |||||||||||||||||||||||| |||| || ||||||||||    
T  48155233 attccgttaaagaattaacaacaaggactaattttgataacatagataaaatgtgaagattttaaaaacatttaatgaaatataggaacaattcttcaaa 48155332  T
Q  217 ggatcgaacgcaaaacgtaaggactaaaaacatatttaac 256  Q
    |    || |||||||  |||||| ||||||||||||||||    
T  48155333 g----gagcgcaaaatataaggattaaaaacatatttaac 48155368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 109 - 257
Target Start/End: Complemental strand, 18180024 - 18179879
Alignment:
Q  109 cacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggacta 207  Q
    |||||||  ||||||||||| ||||| ||  |||||||||||| |||||| ||||| ||||||| |||||||||||||| |||||||||| || ||||||    
T  18180024 cacatcagcattccgttagaaaattagcagtagagactaattttgataacggagataaaatgtgaggattttaaaaacaattaatgaaatataaggacta 18179925  T
Q  208 ttcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    || |||||||    |   |||||| ||||||||||||||||| |||||||    
T  18179924 tttttcaaag----gggtgcaaaatgtaaggactaaaaacatgtttaacc 18179879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 109 - 216
Target Start/End: Original strand, 50359384 - 50359492
Alignment:
Q  109 cacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggacta 207  Q
    |||||||  ||||||||| |||  ||| | ||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||  | ||||||    
T  50359384 cacatcagcattccgttaaagacataaaagcagagactaattttgataacagagataaaatgtgaggattttaaaaacatttaatgaaataaaaggacta 50359483  T
Q  208 ttcttcaaa 216  Q
    |||||||||    
T  50359484 ttcttcaaa 50359492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 257
Target Start/End: Original strand, 1500991 - 1501071
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    ||||||||||||||||||||||||||||||||||||||||||||     || |||||||  || |||||||||||||||||||||    
T  1500991 ggattttaaaaacatttaatgaaatgtagggactattcttcaaa----agagcgcaaaatatagggactaaaaacatatttaacc 1501071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 98 - 257
Target Start/End: Original strand, 4288374 - 4288525
Alignment:
Q  98 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 196  Q
    |||||||||  |||||||| ||||||||| |||||||||| ||  || |||||| ||||||  | || ||||||| |||||||||||||||||     ||    
T  4288374 ccactaactgacacatcaacattccgttaaagaattaacagcatggattaattttgataacgaatataaaatgtgaggattttaaaaacattt-----aa 4288468  T
Q  197 tgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||||||||||||||||||||    |  |||||||  ||||||||||||||||||||||||    
T  4288469 tgtagggactattcttcaaag----gggcgcaaaatataaggactaaaaacatatttaacc 4288525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 109 - 255
Target Start/End: Complemental strand, 19976309 - 19976166
Alignment:
Q  109 cacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggacta 207  Q
    ||||||||||||  |||||| |||||||| ||  || |||||| ||||| |||||| ||||||| |||||||||||||||||||| |||  || | ||||    
T  19976309 cacatcaatattttgttagataattaacaacaaggattaattttgataatagagataaaatgtggggattttaaaaacatttaataaaaaataagaacta 19976210  T
Q  208 ttcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaa 255  Q
    ||||||||||     | ||||||| |||| ||||||||||||||||||    
T  19976209 ttcttcaaag----aagcgcaaaatgtaacgactaaaaacatatttaa 19976166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 118 - 217
Target Start/End: Complemental strand, 6751183 - 6751083
Alignment:
Q  118 attccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaa 216  Q
    |||| ||||||||||||||||| | ||||||||| |||||| ||||| ||||| |  |||||| ||||||||||||||||| || ||| |||||||||||    
T  6751183 attctgttagagaattaacatcggggactaattttgataacggagataaaatgcgatgatttttaaaacatttaatgaaatataaggattattcttcaaa 6751084  T
Q  217 g 217  Q
    |    
T  6751083 g 6751083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 98 - 212
Target Start/End: Complemental strand, 48155129 - 48155014
Alignment:
Q  98 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 196  Q
    |||||||||  |||||||| | ||||||| ||| |||| | |||||| |||||| |||| | ||||| |||| || |||||||||||||||||||| |||    
T  48155129 ccactaactgtcacatcaacaatccgttacagacttaagagcagagattaattttgatatcggagataaaatatgaggattttaaaaacatttaataaaa 48155030  T
Q  197 tgtagggactattctt 212  Q
    |||| |||||||||||    
T  48155029 tgtaaggactattctt 48155014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 165 - 257
Target Start/End: Complemental strand, 45664775 - 45664687
Alignment:
Q  165 aaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    ||||||| |||||||||||||||||| | |||||||| ||||||||||||||     || || |||| ||| |||||||||||||||||||||    
T  45664775 aaatgtggggattttaaaaacatttattaaaatgtagagactattcttcaaa----tgagcgtaaaatgtagggactaaaaacatatttaacc 45664687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 12869664 - 12869710
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattcttcaaagga 219  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||    
T  12869664 ggattttaaaaacatttattgaaatgtagggactattctttaaagga 12869710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 173 - 257
Target Start/End: Original strand, 36793584 - 36793664
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||||||||||||||||| | |||||||| |||||||||||||||  ||  ||||||||  || |||||||||||||||||||||    
T  36793584 ggattttaaaaacatttattaaaatgtagagactattcttcaaag--tc--acgcaaaatatagggactaaaaacatatttaacc 36793664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 212
Target Start/End: Complemental strand, 1500139 - 1500100
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattctt 212  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  1500139 ggattttaaaaacattcaatgaaatgtagggactattctt 1500100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 258
Target Start/End: Original strand, 3591174 - 3591255
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacct 258  Q
    |||||||||||||||||| ||||||||| |||||||| |||||||  ||  ||||| || ||| |||| |||||||||||||||||    
T  3591174 ggattttaaaaacatttattgaaatgtaaggactatttttcaaag--tc--acgcacaatgtagggaccaaaaacatatttaacct 3591255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 211
Target Start/End: Complemental strand, 8997420 - 8997382
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattct 211  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  8997420 ggattttaaaaacatttattgaaatgtagggactattct 8997382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 257
Target Start/End: Complemental strand, 17968116 - 17968037
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||||||||||||||| | ||||||||||||||||||| |||||  ||||  ||||||| ||| |||| ||||||||||||||||    
T  17968116 ggattttaaaaacattcattgaaatgtagggactattc-tcaaa--atcg--cgcaaaatgtagggaccaaaaacatatttaacc 17968037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 211
Target Start/End: Complemental strand, 32266562 - 32266524
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattct 211  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  32266562 ggattttaaaaacatttattgaaatgtagggactattct 32266524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 211
Target Start/End: Complemental strand, 40124155 - 40124117
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattct 211  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  40124155 ggattttaaaaacatttattgaaatgtagggactattct 40124117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 257
Target Start/End: Original strand, 45230571 - 45230650
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||||||||||||||| | ||||||||||||||||||| |||||  ||||  ||||||| ||| |||| ||||||||||||||||    
T  45230571 ggattttaaaaacattcattgaaatgtagggactattc-tcaaa--atcg--cgcaaaatgtagggaccaaaaacatatttaacc 45230650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 211
Target Start/End: Complemental strand, 47410502 - 47410464
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattct 211  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  47410502 ggattttaaaaacatttattgaaatgtagggactattct 47410464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 211
Target Start/End: Original strand, 47410864 - 47410902
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattct 211  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  47410864 ggattttaaaaacatttattgaaatgtagggactattct 47410902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 190
Target Start/End: Original strand, 47541769 - 47541851
Alignment:
Q  109 cacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacattta 190  Q
    |||||||| ||||||||  | |||||||| ||  ||||||||| |||||| ||||| ||||||| ||||||||||||||||||    
T  47541769 cacatcaacattccgtttaataattaacaacaaggactaattttgataacggagataaaatgtgaggattttaaaaacattta 47541851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 211
Target Start/End: Complemental strand, 9122764 - 9122726
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattct 211  Q
    |||||||||||||||||| ||||||||| ||||||||||    
T  9122764 ggattttaaaaacatttattgaaatgtaaggactattct 9122726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 211
Target Start/End: Original strand, 9123126 - 9123164
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattct 211  Q
    |||||||||||||||||| |||||||||| |||||||||    
T  9123126 ggattttaaaaacatttattgaaatgtagagactattct 9123164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 12868513 - 12868467
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattcttcaaagga 219  Q
    |||||||||||| ||||| ||||||||||| ||||||||| ||||||    
T  12868513 ggattttaaaaatatttattgaaatgtaggaactattctttaaagga 12868467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 211
Target Start/End: Original strand, 32266924 - 32266962
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattct 211  Q
    |||||||||||||||||| ||||||||||||| ||||||    
T  32266924 ggattttaaaaacatttattgaaatgtagggattattct 32266962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 211
Target Start/End: Original strand, 40124517 - 40124555
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattct 211  Q
    |||||||||||||||||| ||||||||||||| ||||||    
T  40124517 ggattttaaaaacatttattgaaatgtagggattattct 40124555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 211
Target Start/End: Complemental strand, 46802401 - 46802363
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattct 211  Q
    ||||||||||||| |||| ||||||||||||||||||||    
T  46802401 ggattttaaaaacttttattgaaatgtagggactattct 46802363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 109 - 192
Target Start/End: Original strand, 42723200 - 42723284
Alignment:
Q  109 cacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaat 192  Q
    |||||||  ||||| ||||| |||||||| || | |||||||| | |||| || || ||||||| ||||||||||||||||||||    
T  42723200 cacatcagcattccattagataattaacaacataaactaattttgctaacggatataaaatgtgaggattttaaaaacatttaat 42723284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 209
Target Start/End: Original strand, 46802763 - 46802799
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactatt 209  Q
    |||||||||||||||||| | ||||||||||||||||    
T  46802763 ggattttaaaaacatttattaaaatgtagggactatt 46802799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 3e-30; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 109 - 256
Target Start/End: Original strand, 7645927 - 7646071
Alignment:
Q  109 cacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggacta 207  Q
    |||||||| ||||||||||| |||||||| ||| ||||||||| |||||| ||||| ||||||| | ||||| |||||||||| ||||||||| ||||||    
T  7645927 cacatcaacattccgttagaaaattaacagcagggactaattttgataacggagataaaatgtgagaatttttaaaacatttattgaaatgtaaggacta 7646026  T
Q  208 ttcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaac 256  Q
    ||||||||||    || | ||||| ||||||||||||||||||||||||    
T  7646027 ttcttcaaag----gagcacaaaatgtaaggactaaaaacatatttaac 7646071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 98 - 215
Target Start/End: Complemental strand, 17157702 - 17157584
Alignment:
Q  98 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 196  Q
    |||||||||| |||||||  ||| |||||||||||||||| ||| ||||||||| ||||| |||||| ||||||| |||||||||||| |||||||||||    
T  17157702 ccactaactaccacatcagcatttcgttagagaattaacagcagtgactaattttgataatagagataaaatgtgaggattttaaaaatatttaatgaaa 17157603  T
Q  197 tgtagggactattcttcaa 215  Q
    |||| ||||||||||||||    
T  17157602 tgtatggactattcttcaa 17157584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 99 - 215
Target Start/End: Complemental strand, 21113184 - 21113067
Alignment:
Q  99 cactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaat 197  Q
    ||||||||  |||||||  |||||||||||||||||||| ||||||||||||| |||||  ||||| ||||||| | |||||||||||||||||||||||    
T  21113184 cactaactgccacatcagcattccgttagagaattaacagcagagactaattttgataaaggagataaaatgtgagaattttaaaaacatttaatgaaat 21113085  T
Q  198 gtagggactattcttcaa 215  Q
    |||| |||||||||||||    
T  21113084 gtagagactattcttcaa 21113067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 109 - 257
Target Start/End: Complemental strand, 5974156 - 5974011
Alignment:
Q  109 cacatcaatattccgttagagaattaacatcagagactaatttga-taacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggacta 207  Q
    |||||||  |||||||||||||||||||| ||  ||||||||| | |||| || || ||||||| |||||||||||||||||||||||||||||||||||    
T  5974156 cacatcagcattccgttagagaattaacaacatggactaattttaataacggaaataaaatgtggggattttaaaaacatttaatgaaatgtagggacta 5974057  T
Q  208 ttcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    ||||||||||    |   ||||||  ||||||||||||||||||||||||    
T  5974056 ttcttcaaag----gggtgcaaaatataaggactaaaaacatatttaacc 5974011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 109 - 257
Target Start/End: Original strand, 8710286 - 8710430
Alignment:
Q  109 cacatcaatattccgttagagaattaacatcagagactaatttga-taacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggacta 207  Q
    |||||||| |||||||||||||||||||| ||  ||||||||| | |||| || || ||||||| |||||||||||||||||||||||||||| ||||||    
T  8710286 cacatcaacattccgttagagaattaacaacatggactaattttaataac-gaaataaaatgtggggattttaaaaacatttaatgaaatgtaaggacta 8710384  T
Q  208 ttcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    ||||||||||    |   ||||||  ||||||||||||||||||||||||    
T  8710385 ttcttcaaag----gggtgcaaaatataaggactaaaaacatatttaacc 8710430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 121 - 256
Target Start/End: Original strand, 14712963 - 14713095
Alignment:
Q  121 ccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaagga 219  Q
    ||||||||||||||||| ||||||||||||| |||||||||||| |||| || | ||||  |||||||||||||||||||| |||||||||||||||       
T  14712963 ccgttagagaattaacagcagagactaattttgataacagagataaaatatgagcatttctaaaacatttaatgaaatgtaaggactattcttcaaa--- 14713059  T
Q  220 tcgaacgcaaaacgtaaggactaaaaacatatttaac 256  Q
      || ||||||| ||||| | ||||||||||||||||    
T  14713060 -agagcgcaaaatgtaagaattaaaaacatatttaac 14713095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 165 - 257
Target Start/End: Complemental strand, 211529 - 211441
Alignment:
Q  165 aaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||||||||||    |  ||||||| |||||||||||||||||||||||||    
T  211529 aaatgtgaggattttaaaatcatttaatgaaatgtacggactattcttcaaag----gggcgcaaaatgtaaggactaaaaacatatttaacc 211441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 122 - 257
Target Start/End: Original strand, 211679 - 211811
Alignment:
Q  122 cgttagagaattaacatcagagactaatttgataacagagatcaaatgtgtggattttaaaaac-atttaatgaaatgtagggactattcttcaaaggat 220  Q
    ||||||||||||||||  || || |||||||||||  ||||| |||||||  |||||||||||  ||||||||||||||||||||||||||||||   ||    
T  211679 cgttagagaattaacagtagggattaatttgataatggagataaaatgtgaagattttaaaaaatatttaatgaaatgtagggactattcttcaa---at 211775  T
Q  221 cgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
     |  ||||||| ||||||| |||||||||||||||||    
T  211776 ag-gcgcaaaatgtaaggattaaaaacatatttaacc 211811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 149 - 257
Target Start/End: Complemental strand, 4510293 - 4510188
Alignment:
Q  149 tttgataacagagatcaaatgtgt-ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaac 247  Q
    ||||||||| ||||| |||| ||  |||||||||||||||||||||||||||||||||||||||||||   || |  || |||| |||||||||||||||    
T  4510293 tttgataaccgagataaaatatggaggattttaaaaacatttaatgaaatgtagggactattcttcaa---atag-gcgtaaaatgtaaggactaaaaac 4510198  T
Q  248 atatttaacc 257  Q
    ||||||||||    
T  4510197 atatttaacc 4510188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 118 - 209
Target Start/End: Original strand, 25932339 - 25932431
Alignment:
Q  118 attccgttagagaattaacatcagagactaa-tttgataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactatt 209  Q
    |||||||||||||||||||  |||||||||| ||||||||| ||||| ||||||| | ||||||| |||||| || ||||||||| |||||||    
T  25932339 attccgttagagaattaacggcagagactaattttgataacggagataaaatgtgagaattttaataacattgaacgaaatgtagtgactatt 25932431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 98 - 257
Target Start/End: Complemental strand, 25932235 - 25932083
Alignment:
Q  98 ccactaactagcacatcaatattccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaa 196  Q
    |||||||| | |||||||  |||||||||||||| ||| | ||  ||||||||| |||||| ||||| |||||   ||||||||||||    ||||||||    
T  25932235 ccactaaccaacacatcagcattccgttagagaaataatagcatggactaattttgataacggagataaaatgcaaggattttaaaaa----taatgaaa 25932140  T
Q  197 tgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    || ||||||||||||||||||    ||| |||||| |||| ||||||||| ||||||||||    
T  25932139 tgcagggactattcttcaaag----gaaagcaaaatgtaaagactaaaaatatatttaacc 25932083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 186 - 257
Target Start/End: Original strand, 17157856 - 17157923
Alignment:
Q  186 atttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    ||||||||||||||||||||||||||||||||  | |  ||||||| |||||||||||||||||||||||||    
T  17157856 atttaatgaaatgtagggactattcttcaaag--tgg--cgcaaaatgtaaggactaaaaacatatttaacc 17157923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 1869555 - 1869503
Alignment:
Q  149 tttgataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtag 201  Q
    ||||||||| ||||| ||||||| |||||||||||||||||||||||||||||    
T  1869555 tttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtag 1869503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 20522167 - 20522209
Alignment:
Q  174 gattttaaaaacatttaatgaaatgtagggactattcttcaaa 216  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  20522167 gattttaaaaacatttattgaaatgtagggactattcttcaaa 20522209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 173 - 257
Target Start/End: Original strand, 34984554 - 34984633
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||||||||||||||||| ||||||||||||||||||| |||||  ||||  ||||||| ||| |||| ||||||||||||||||    
T  34984554 ggattttaaaaacatttattgaaatgtagggactattc-tcaaa--atcg--cgcaaaatgtagggaccaaaaacatatttaacc 34984633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 173 - 258
Target Start/End: Complemental strand, 14712910 - 14712829
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacct 258  Q
    |||||||||||||||||| ||||||||| |||||||| |||||||      |||||||| ||| |||| |||||||||||||||||    
T  14712910 ggattttaaaaacatttattgaaatgtaaggactatttttcaaag----tgacgcaaaatgtagggaccaaaaacatatttaacct 14712829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 211
Target Start/End: Complemental strand, 14257226 - 14257188
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattct 211  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  14257226 ggattttaaaaacatttattgaaatgtagggactattct 14257188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 211
Target Start/End: Original strand, 14257588 - 14257626
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattct 211  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  14257588 ggattttaaaaacatttattgaaatgtagggactattct 14257626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 211
Target Start/End: Complemental strand, 20824243 - 20824205
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattct 211  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  20824243 ggattttaaaaacatttattgaaatgtagggactattct 20824205  T

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Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 257
Target Start/End: Original strand, 33107371 - 33107450
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
    |||||||||||||||| | ||||||||||||||||||| |||||  ||||  ||||||| ||| |||| ||||||||||||||||    
T  33107371 ggattttaaaaacattcattgaaatgtagggactattc-tcaaa--atcg--cgcaaaatgtagggaccaaaaacatatttaacc 33107450  T

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Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 173 - 256
Target Start/End: Original strand, 6162698 - 6162776
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaac 256  Q
    |||||||||||||||||| |||||||||| |||||||| |||||  ||||  ||||||| ||| |||| |||||||||||||||    
T  6162698 ggattttaaaaacatttattgaaatgtagagactattc-tcaaa--atcg--cgcaaaatgtagggaccaaaaacatatttaac 6162776  T

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Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 173 - 212
Target Start/End: Original strand, 19595659 - 19595698
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattctt 212  Q
    |||||||||||| ||||| |||||||||||||||||||||    
T  19595659 ggattttaaaaatatttattgaaatgtagggactattctt 19595698  T

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Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 211
Target Start/End: Complemental strand, 15147797 - 15147759
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattct 211  Q
    |||||||||||||||||| ||||||||||||| ||||||    
T  15147797 ggattttaaaaacatttattgaaatgtagggattattct 15147759  T

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Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 212
Target Start/End: Original strand, 19579193 - 19579251
Alignment:
Q  154 taacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattctt 212  Q
    |||||||||| |||| |  |||||||||||||||||| ||||||| || ||||||||||    
T  19579193 taacagagataaaatatagggattttaaaaacatttattgaaatgcagagactattctt 19579251  T

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Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 211
Target Start/End: Original strand, 20824605 - 20824643
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattct 211  Q
    |||||||||||||||||| ||||||||||||| ||||||    
T  20824605 ggattttaaaaacatttattgaaatgtagggattattct 20824643  T

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Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 151
Target Start/End: Complemental strand, 34527746 - 34527713
Alignment:
Q  118 attccgttagagaattaacatcagagactaattt 151  Q
    |||||||||||||||||||| |||||||||||||    
T  34527746 attccgttagagaattaacaacagagactaattt 34527713  T

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Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 209
Target Start/End: Original strand, 15148159 - 15148195
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactatt 209  Q
    ||||||||||| |||||| ||||||||||||||||||    
T  15148159 ggattttaaaatcatttattgaaatgtagggactatt 15148195  T

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Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 20521265 - 20521225
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattcttc 213  Q
    |||||||||||||||||  |||||| |||||||||||||||    
T  20521265 ggattttaaaaacattttttgaaatatagggactattcttc 20521225  T

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Target: scaffold0063 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 99 - 256
Target Start/End: Original strand, 35127 - 35281
Alignment:
Q  99 cactaactagcacatcaatattccgttagagaattaacatcagagactaatttg-ataacagagatcaaatgtgtggattttaaaaacatttaatgaaat 197  Q
    ||||||||  |||||||| |||| |||||||| |||| | || | ||||||||  ||||| ||||| ||||||| |||||||||||||||| ||| ||||    
T  35127 cactaactcccacatcaacattctgttagagagttaagagcataaactaattttcataaccgagataaaatgtgaggattttaaaaacattcaataaaat 35226  T
Q  198 gtagggactattcttcaaaggatcgaacgcaaaacgtaaggactaaaaacatatttaac 256  Q
    |||| ||||||||||||||||     |||||||| ||||||||||||||||||||||||    
T  35227 gtagagactattcttcaaaggg----acgcaaaatgtaaggactaaaaacatatttaac 35281  T

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Target: scaffold0063; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 121 - 255
Target Start/End: Complemental strand, 34925 - 34794
Alignment:
Q  121 ccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaagga 219  Q
    |||||||| |||||| | ||||||||||||| |||||| ||||| ||||||| | | |||||||||||||||||||||||| |||| ||| |||||   |    
T  34925 ccgttagaaaattaatagcagagactaattttgataacggagataaaatgtgagtactttaaaaacatttaatgaaatgtatggaccattattcaa---a 34829  T
Q  220 tcgaacgcaaaacgtaaggactaaaaacatatttaa 255  Q
    | | ||||||||  ||||||||||||||||||||||    
T  34828 tag-acgcaaaatataaggactaaaaacatatttaa 34794  T

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Target: scaffold0933 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0933
Description:

Target: scaffold0933; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 257
Target Start/End: Complemental strand, 627 - 491
Alignment:
Q  118 attccgttagagaattaacatcagagactaattt-gataacagagatcaaatgtgtggattttaaaaacatttaatgaaatgtagggactattcttcaaa 216  Q
    ||||||||||| || ||||| || |||||||||| ||||||| | || |||||||   |||||||||||||||||||||||||| | || | || |||||    
T  627 attccgttagaaaaataacaacatagactaattttgataacaaaaataaaatgtgaaaattttaaaaacatttaatgaaatgtaagaacaactcgtcaaa 528  T
Q  217 ggatcgaacgcaaaacgtaaggactaaaaacatatttaacc 257  Q
     |||    |||||||  |||| |||||||||||||||||||    
T  527 tgat----cgcaaaatctaagaactaaaaacatatttaacc 491  T

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Target: scaffold0085 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 211
Target Start/End: Original strand, 39862 - 39900
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattct 211  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  39862 ggattttaaaaacatttattgaaatgtagggactattct 39900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 211
Target Start/End: Complemental strand, 39500 - 39462
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactattct 211  Q
    |||||||||||||||||| ||||||||||||| ||||||    
T  39500 ggattttaaaaacatttattgaaatgtagggattattct 39462  T

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Target: scaffold0148 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 209
Target Start/End: Complemental strand, 29354 - 29318
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactatt 209  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  29354 ggattttaaaaacatttattgaaatgtaaggactatt 29318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 209
Target Start/End: Original strand, 33004 - 33040
Alignment:
Q  173 ggattttaaaaacatttaatgaaatgtagggactatt 209  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  33004 ggattttaaaaacatttattgaaatgtaaggactatt 33040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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