View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0321_low_6 (Length: 355)

Name: NF0321_low_6
Description: NF0321
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0321_low_6
NF0321_low_6
[»] chr4 (46 HSPs)
chr4 (200-330)||(30298910-30299043)
chr4 (200-330)||(30327778-30327911)
chr4 (232-331)||(12895116-12895211)
chr4 (231-314)||(23292985-23293065)
chr4 (231-332)||(49430982-49431086)
chr4 (231-331)||(12797337-12797438)
chr4 (231-307)||(42640513-42640589)
chr4 (231-314)||(21945483-21945563)
chr4 (234-332)||(29205408-29205501)
chr4 (200-233)||(5775309-5775342)
chr4 (231-264)||(16073421-16073454)
chr4 (200-233)||(23292931-23292964)
chr4 (200-237)||(28470442-28470479)
chr4 (200-232)||(715550-715582)
chr4 (200-232)||(752876-752908)
chr4 (231-267)||(6879464-6879500)
chr4 (278-333)||(24543941-24543997)
chr4 (200-232)||(28084606-28084638)
chr4 (231-267)||(28964247-28964283)
chr4 (231-267)||(54580022-54580058)
chr4 (200-231)||(4383449-4383480)
chr4 (232-267)||(11596352-11596387)
chr4 (200-231)||(22440562-22440593)
chr4 (233-267)||(715608-715642)
chr4 (233-267)||(752934-752968)
chr4 (200-230)||(3064873-3064903)
chr4 (200-234)||(11596302-11596336)
chr4 (200-234)||(12895219-12895253)
chr4 (233-263)||(28000743-28000773)
chr4 (201-254)||(30094066-30094126)
chr4 (234-267)||(6485613-6485646)
chr4 (304-333)||(22234954-22234983)
chr4 (200-233)||(36635411-36635444)
chr4 (200-233)||(40784034-40784067)
chr4 (200-233)||(53381535-53381568)
chr4 (232-264)||(3947766-3947798)
chr4 (304-332)||(4157102-4157130)
chr4 (231-267)||(4157173-4157209)
chr4 (231-267)||(4157460-4157496)
chr4 (280-332)||(7970483-7970535)
chr4 (231-267)||(8423717-8423753)
chr4 (200-240)||(18844428-18844467)
chr4 (304-332)||(20633429-20633457)
chr4 (200-232)||(28964193-28964225)
chr4 (200-232)||(29205550-29205582)
chr4 (277-330)||(35723427-35723484)
[»] chr6 (56 HSPs)
chr6 (124-191)||(1694309-1694376)
chr6 (231-331)||(28152062-28152158)
chr6 (231-334)||(17841588-17841688)
chr6 (200-314)||(426483-426593)
chr6 (208-331)||(7801132-7801259)
chr6 (232-333)||(10770674-10770777)
chr6 (232-314)||(16766677-16766756)
chr6 (239-332)||(17302518-17302609)
chr6 (200-267)||(5732479-5732545)
chr6 (231-314)||(34595114-34595194)
chr6 (232-314)||(8365519-8365598)
chr6 (232-314)||(9107370-9107449)
chr6 (232-314)||(12696304-12696383)
chr6 (208-267)||(7027266-7027323)
chr6 (208-267)||(9911495-9911563)
chr6 (200-314)||(7938096-7938214)
chr6 (231-314)||(7977829-7977909)
chr6 (231-314)||(8776972-8777052)
chr6 (232-314)||(3398599-3398677)
chr6 (231-265)||(28715321-28715355)
chr6 (234-267)||(9522915-9522948)
chr6 (234-330)||(16833267-16833365)
chr6 (231-263)||(16388216-16388248)
chr6 (200-232)||(17327595-17327627)
chr6 (200-231)||(4878025-4878056)
chr6 (277-332)||(10842494-10842549)
chr6 (232-267)||(31384944-31384979)
chr6 (231-266)||(32978898-32978933)
chr6 (231-265)||(6898280-6898314)
chr6 (232-314)||(9027158-9027237)
chr6 (278-332)||(17435162-17435215)
chr6 (200-230)||(17841534-17841564)
chr6 (231-265)||(26402679-26402713)
chr6 (302-332)||(34225886-34225916)
chr6 (231-308)||(3209367-3209442)
chr6 (200-229)||(7723204-7723233)
chr6 (304-333)||(7938059-7938088)
chr6 (200-233)||(8389413-8389446)
chr6 (200-233)||(9025450-9025483)
chr6 (232-265)||(21395308-21395341)
chr6 (233-266)||(27904037-27904070)
chr6 (200-233)||(31385011-31385044)
chr6 (200-233)||(31959231-31959264)
chr6 (200-233)||(34595215-34595248)
chr6 (231-267)||(403863-403899)
chr6 (231-267)||(853858-853894)
chr6 (231-267)||(1700376-1700412)
chr6 (231-267)||(4877967-4878003)
chr6 (231-267)||(7265592-7265628)
chr6 (200-232)||(8365453-8365485)
chr6 (200-232)||(8805529-8805561)
chr6 (278-314)||(9658859-9658895)
chr6 (200-232)||(10339059-10339091)
chr6 (304-332)||(18367781-18367809)
chr6 (277-317)||(19147445-19147485)
chr6 (231-267)||(32511665-32511701)
[»] chr2 (58 HSPs)
chr2 (231-333)||(37558938-37559037)
chr2 (200-314)||(19536366-19536477)
chr2 (203-263)||(34691777-34691836)
chr2 (203-263)||(34714189-34714248)
chr2 (200-267)||(18255949-18256015)
chr2 (200-314)||(20539637-20539753)
chr2 (233-334)||(18841014-18841117)
chr2 (231-332)||(30404849-30404952)
chr2 (200-332)||(39323226-39323352)
chr2 (232-332)||(37419704-37419802)
chr2 (231-267)||(2438718-2438754)
chr2 (232-267)||(18421987-18422022)
chr2 (200-265)||(34221468-34221530)
chr2 (200-233)||(2438664-2438697)
chr2 (233-314)||(11223864-11223942)
chr2 (233-314)||(14996224-14996303)
chr2 (239-316)||(21374706-21374780)
chr2 (231-264)||(21624294-21624327)
chr2 (200-233)||(37419835-37419868)
chr2 (231-267)||(5040758-5040794)
chr2 (278-314)||(6940235-6940271)
chr2 (200-232)||(26769604-26769636)
chr2 (231-267)||(44635522-44635558)
chr2 (232-267)||(974771-974806)
chr2 (232-267)||(15657888-15657923)
chr2 (231-314)||(15972853-15972933)
chr2 (277-332)||(19580323-19580378)
chr2 (232-267)||(23058442-23058477)
chr2 (278-313)||(24894370-24894405)
chr2 (303-334)||(27084228-27084259)
chr2 (232-267)||(30717530-30717565)
chr2 (232-267)||(33153448-33153483)
chr2 (200-234)||(17776678-17776712)
chr2 (203-233)||(23354589-23354619)
chr2 (200-233)||(11223798-11223831)
chr2 (232-265)||(12668423-12668456)
chr2 (277-314)||(12940977-12941014)
chr2 (200-233)||(18840958-18840991)
chr2 (200-233)||(19942346-19942379)
chr2 (200-233)||(23058389-23058422)
chr2 (200-233)||(23354929-23354962)
chr2 (304-333)||(26769460-26769489)
chr2 (304-333)||(27447088-27447117)
chr2 (232-265)||(33884077-33884110)
chr2 (232-265)||(36756344-36756377)
chr2 (200-233)||(38117104-38117137)
chr2 (291-332)||(41843403-41843444)
chr2 (303-332)||(44770206-44770235)
chr2 (200-232)||(3444831-3444863)
chr2 (231-267)||(5367216-5367252)
chr2 (231-267)||(20242726-20242762)
chr2 (231-263)||(20473350-20473382)
chr2 (304-332)||(21374781-21374809)
chr2 (278-314)||(21624246-21624282)
chr2 (277-309)||(27460011-27460043)
chr2 (231-263)||(27460065-27460097)
chr2 (231-267)||(28596493-28596529)
chr2 (200-232)||(42511327-42511359)
[»] chr5 (48 HSPs)
chr5 (200-332)||(14674231-14674363)
chr5 (200-267)||(10298593-10298664)
chr5 (232-317)||(39698518-39698600)
chr5 (231-314)||(21191055-21191135)
chr5 (200-329)||(8419985-8420117)
chr5 (235-332)||(43001762-43001856)
chr5 (200-243)||(22423769-22423812)
chr5 (231-267)||(6247646-6247682)
chr5 (231-267)||(15884012-15884048)
chr5 (231-314)||(15382457-15382539)
chr5 (232-314)||(21522730-21522809)
chr5 (232-314)||(21533296-21533375)
chr5 (233-267)||(21351906-21351940)
chr5 (200-234)||(35017123-35017157)
chr5 (200-233)||(14873603-14873636)
chr5 (200-233)||(17123128-17123161)
chr5 (232-313)||(19579682-19579760)
chr5 (200-233)||(21191001-21191034)
chr5 (232-265)||(21542056-21542089)
chr5 (277-314)||(22013394-22013431)
chr5 (200-232)||(4105341-4105373)
chr5 (277-333)||(6035444-6035500)
chr5 (200-232)||(21576690-21576722)
chr5 (231-267)||(21576744-21576780)
chr5 (231-267)||(33178049-33178085)
chr5 (200-232)||(39268543-39268575)
chr5 (236-267)||(7218271-7218302)
chr5 (232-267)||(13287399-13287434)
chr5 (200-231)||(43001888-43001919)
chr5 (232-329)||(3966467-3966562)
chr5 (203-233)||(17088372-17088402)
chr5 (199-233)||(21194067-21194101)
chr5 (231-265)||(24906300-24906334)
chr5 (200-230)||(39698636-39698666)
chr5 (233-267)||(42893384-42893418)
chr5 (231-324)||(43564853-43564941)
chr5 (304-333)||(15382420-15382449)
chr5 (277-314)||(19552585-19552622)
chr5 (200-233)||(19820333-19820366)
chr5 (277-314)||(36642804-36642841)
chr5 (232-265)||(41633761-41633794)
chr5 (200-233)||(43564962-43564995)
chr5 (200-232)||(3966596-3966628)
chr5 (278-314)||(6770523-6770559)
chr5 (278-314)||(15410491-15410527)
chr5 (200-232)||(23015929-23015961)
chr5 (231-267)||(28588673-28588709)
chr5 (302-330)||(41995417-41995445)
[»] chr1 (69 HSPs)
chr1 (231-331)||(46348382-46348479)
chr1 (277-327)||(18556498-18556548)
chr1 (200-333)||(48450555-48450690)
chr1 (232-314)||(1486709-1486788)
chr1 (231-313)||(42359448-42359527)
chr1 (215-332)||(31672879-31672987)
chr1 (200-264)||(24334669-24334737)
chr1 (232-332)||(24577186-24577289)
chr1 (231-332)||(51409981-51410085)
chr1 (231-312)||(22515886-22515964)
chr1 (200-333)||(35702547-35702692)
chr1 (231-316)||(38078660-38078742)
chr1 (232-331)||(6427425-6427523)
chr1 (231-267)||(18337353-18337389)
chr1 (200-265)||(41877437-41877503)
chr1 (239-333)||(14359529-14359624)
chr1 (232-267)||(47989521-47989556)
chr1 (200-314)||(398738-398844)
chr1 (233-267)||(1815281-1815315)
chr1 (232-314)||(5944261-5944342)
chr1 (231-265)||(19058855-19058889)
chr1 (233-267)||(40258934-40258968)
chr1 (200-234)||(47989588-47989622)
chr1 (232-265)||(6612171-6612204)
chr1 (231-308)||(22881615-22881689)
chr1 (233-333)||(28273089-28273191)
chr1 (200-233)||(42359394-42359427)
chr1 (232-304)||(113289-113358)
chr1 (200-232)||(37598913-37598945)
chr1 (232-267)||(1704992-1705027)
chr1 (232-267)||(6332694-6332729)
chr1 (277-332)||(6427313-6427367)
chr1 (200-231)||(16297226-16297257)
chr1 (234-265)||(21378604-21378635)
chr1 (200-231)||(22947813-22947844)
chr1 (200-267)||(30359412-30359479)
chr1 (232-267)||(31694710-31694745)
chr1 (232-266)||(2218264-2218298)
chr1 (199-233)||(5898210-5898244)
chr1 (200-267)||(17705551-17705621)
chr1 (200-230)||(21365997-21366027)
chr1 (200-230)||(22515832-22515862)
chr1 (237-267)||(31015067-31015097)
chr1 (231-332)||(37598793-37598891)
chr1 (200-233)||(1486649-1486682)
chr1 (232-265)||(5376500-5376533)
chr1 (277-314)||(5927382-5927419)
chr1 (200-233)||(9828136-9828169)
chr1 (200-233)||(16812637-16812670)
chr1 (200-233)||(26830668-26830701)
chr1 (200-233)||(27965945-27965978)
chr1 (232-265)||(30173762-30173795)
chr1 (200-233)||(34741927-34741960)
chr1 (277-314)||(40917731-40917768)
chr1 (200-233)||(40917841-40917874)
chr1 (277-314)||(48040504-48040541)
chr1 (304-333)||(48548049-48548078)
chr1 (277-313)||(2896163-2896199)
chr1 (304-332)||(10577822-10577850)
chr1 (200-232)||(15765840-15765872)
chr1 (233-265)||(18190109-18190141)
chr1 (200-232)||(18556390-18556422)
chr1 (231-267)||(21620979-21621015)
chr1 (304-332)||(25934572-25934600)
chr1 (277-317)||(29144400-29144440)
chr1 (231-267)||(30749864-30749900)
chr1 (231-267)||(30771315-30771351)
chr1 (200-232)||(36878548-36878580)
chr1 (304-332)||(38078743-38078771)
[»] scaffold0027 (1 HSPs)
scaffold0027 (200-314)||(46662-46771)
[»] chr8 (39 HSPs)
chr8 (231-334)||(36450753-36450853)
chr8 (232-314)||(22651956-22652035)
chr8 (200-267)||(31514897-31514968)
chr8 (231-267)||(4948676-4948712)
chr8 (234-314)||(29510306-29510383)
chr8 (231-314)||(20873049-20873129)
chr8 (232-267)||(25566865-25566900)
chr8 (200-267)||(30077356-30077422)
chr8 (277-332)||(31109560-31109615)
chr8 (232-314)||(24669413-24669492)
chr8 (225-267)||(40332215-40332256)
chr8 (278-331)||(22204603-22204655)
chr8 (231-332)||(22595950-22596054)
chr8 (202-264)||(30271224-30271287)
chr8 (199-232)||(31109462-31109495)
chr8 (231-267)||(24613544-24613580)
chr8 (232-267)||(2572056-2572091)
chr8 (232-267)||(8342996-8343031)
chr8 (200-267)||(34897109-34897175)
chr8 (298-332)||(5137484-5137518)
chr8 (231-317)||(5813569-5813652)
chr8 (232-314)||(13436964-13437043)
chr8 (277-311)||(25192389-25192423)
chr8 (233-267)||(31557020-31557054)
chr8 (200-233)||(15816063-15816096)
chr8 (200-233)||(16987994-16988027)
chr8 (200-233)||(17751737-17751770)
chr8 (200-233)||(17760724-17760757)
chr8 (238-267)||(18407743-18407772)
chr8 (200-233)||(22652068-22652101)
chr8 (200-233)||(25566911-25566944)
chr8 (200-233)||(29510238-29510271)
chr8 (200-233)||(39820509-39820542)
chr8 (304-332)||(3951616-3951644)
chr8 (231-267)||(4786337-4786373)
chr8 (231-263)||(15023256-15023288)
chr8 (304-332)||(20785546-20785574)
chr8 (304-332)||(24413647-24413675)
chr8 (200-267)||(27213571-27213639)
[»] chr7 (51 HSPs)
chr7 (200-314)||(27945021-27945132)
chr7 (231-333)||(15680770-15680869)
chr7 (232-333)||(18215186-18215284)
chr7 (232-314)||(5409836-5409915)
chr7 (278-332)||(7197340-7197394)
chr7 (232-314)||(24339622-24339701)
chr7 (277-331)||(25791616-25791670)
chr7 (277-312)||(12010022-12010057)
chr7 (232-267)||(18039023-18039058)
chr7 (232-267)||(21560527-21560562)
chr7 (231-265)||(21880178-21880212)
chr7 (231-309)||(25481887-25481962)
chr7 (236-333)||(26033465-26033557)
chr7 (200-265)||(28155596-28155668)
chr7 (200-233)||(5409776-5409809)
chr7 (233-314)||(11061077-11061155)
chr7 (277-314)||(24105658-24105695)
chr7 (211-267)||(3721117-3721172)
chr7 (277-333)||(11072259-11072315)
chr7 (277-333)||(26019673-26019729)
chr7 (277-333)||(32308081-32308137)
chr7 (232-267)||(2334274-2334309)
chr7 (232-267)||(3991348-3991383)
chr7 (232-267)||(9408334-9408369)
chr7 (232-267)||(9778524-9778559)
chr7 (232-263)||(11272586-11272617)
chr7 (232-314)||(13770671-13770750)
chr7 (200-231)||(29763134-29763165)
chr7 (232-267)||(32094020-32094055)
chr7 (200-231)||(35862034-35862065)
chr7 (233-267)||(7438730-7438764)
chr7 (277-330)||(11665482-11665536)
chr7 (298-332)||(19213773-19213807)
chr7 (200-234)||(28973886-28973920)
chr7 (233-267)||(33994236-33994270)
chr7 (200-233)||(598289-598322)
chr7 (200-233)||(6490797-6490830)
chr7 (200-233)||(8842284-8842317)
chr7 (200-233)||(9778586-9778619)
chr7 (200-233)||(24339734-24339767)
chr7 (232-261)||(25822685-25822714)
chr7 (200-233)||(29812603-29812636)
chr7 (200-229)||(30813882-30813911)
chr7 (200-233)||(32287408-32287441)
chr7 (278-331)||(37742486-37742539)
chr7 (200-233)||(40287307-40287340)
chr7 (200-233)||(43027409-43027442)
chr7 (200-232)||(3991395-3991427)
chr7 (304-332)||(9778452-9778480)
chr7 (231-267)||(19213827-19213863)
chr7 (200-232)||(32093959-32093991)
[»] chr3 (60 HSPs)
chr3 (200-267)||(21256953-21257021)
chr3 (204-267)||(7928474-7928536)
chr3 (277-332)||(40052295-40052349)
chr3 (235-332)||(26508067-26508166)
chr3 (234-331)||(20503429-20503522)
chr3 (277-332)||(33359722-33359778)
chr3 (232-314)||(28917981-28918060)
chr3 (200-314)||(10335250-10335365)
chr3 (231-316)||(10954930-10955012)
chr3 (232-332)||(28812477-28812574)
chr3 (232-332)||(34910279-34910376)
chr3 (199-267)||(35994709-35994773)
chr3 (277-317)||(10318076-10318116)
chr3 (231-267)||(25775533-25775569)
chr3 (231-314)||(8587020-8587100)
chr3 (231-314)||(55401055-55401135)
chr3 (232-329)||(14209079-14209172)
chr3 (232-314)||(14829670-14829748)
chr3 (277-314)||(3865598-3865635)
chr3 (200-233)||(20503546-20503579)
chr3 (231-308)||(21479104-21479178)
chr3 (200-233)||(34185057-34185090)
chr3 (235-307)||(4987294-4987363)
chr3 (231-267)||(8593161-8593197)
chr3 (231-267)||(51206352-51206388)
chr3 (232-267)||(1509563-1509598)
chr3 (200-231)||(4990917-4990948)
chr3 (277-328)||(6525722-6525773)
chr3 (231-314)||(8383237-8383317)
chr3 (233-332)||(22774071-22774167)
chr3 (231-314)||(26492204-26492284)
chr3 (232-267)||(27505270-27505305)
chr3 (232-267)||(34185123-34185158)
chr3 (277-332)||(37077320-37077375)
chr3 (232-267)||(49651786-49651821)
chr3 (233-267)||(3865698-3865732)
chr3 (200-230)||(8789493-8789523)
chr3 (200-230)||(8842413-8842443)
chr3 (200-234)||(11610589-11610623)
chr3 (298-332)||(13845580-13845614)
chr3 (231-265)||(16000015-16000049)
chr3 (200-267)||(25948851-25948922)
chr3 (231-332)||(40993334-40993432)
chr3 (200-230)||(55401159-55401189)
chr3 (304-333)||(750706-750735)
chr3 (290-331)||(1852600-1852641)
chr3 (204-233)||(4987229-4987258)
chr3 (232-265)||(4990967-4991000)
chr3 (277-333)||(14979137-14979198)
chr3 (200-233)||(14979230-14979263)
chr3 (200-233)||(27505332-27505365)
chr3 (200-233)||(34910398-34910431)
chr3 (200-233)||(40052393-40052426)
chr3 (200-233)||(40993280-40993313)
chr3 (304-332)||(14027959-14027987)
chr3 (277-317)||(21720741-21720781)
chr3 (304-332)||(23870622-23870650)
chr3 (237-265)||(35312080-35312108)
chr3 (200-232)||(41961584-41961616)
chr3 (304-332)||(45451523-45451551)
[»] scaffold0103 (1 HSPs)
scaffold0103 (240-321)||(51784-51862)
[»] scaffold0025 (1 HSPs)
scaffold0025 (232-333)||(23729-23829)
[»] scaffold0223 (1 HSPs)
scaffold0223 (210-314)||(20152-20261)
[»] scaffold0306 (1 HSPs)
scaffold0306 (231-314)||(13380-13460)
[»] scaffold0152 (1 HSPs)
scaffold0152 (231-314)||(21867-21947)
[»] scaffold0053 (1 HSPs)
scaffold0053 (231-314)||(8778-8858)
[»] scaffold0004 (4 HSPs)
scaffold0004 (233-307)||(123612-123686)
scaffold0004 (200-231)||(92905-92936)
scaffold0004 (239-317)||(92784-92859)
scaffold0004 (232-265)||(83186-83219)
[»] scaffold0083 (1 HSPs)
scaffold0083 (231-265)||(45529-45563)
[»] scaffold0003 (2 HSPs)
scaffold0003 (232-314)||(241574-241653)
scaffold0003 (200-233)||(241686-241719)
[»] scaffold0652 (2 HSPs)
scaffold0652 (231-312)||(461-539)
scaffold0652 (200-233)||(407-440)
[»] scaffold0793 (2 HSPs)
scaffold0793 (200-232)||(4826-4858)
scaffold0793 (233-267)||(4884-4918)
[»] scaffold0475 (1 HSPs)
scaffold0475 (200-232)||(3390-3422)
[»] scaffold0021 (1 HSPs)
scaffold0021 (235-267)||(130506-130538)
[»] scaffold0171 (2 HSPs)
scaffold0171 (232-267)||(23444-23479)
scaffold0171 (304-332)||(23371-23399)
[»] scaffold0136 (1 HSPs)
scaffold0136 (232-267)||(3849-3884)
[»] scaffold0018 (1 HSPs)
scaffold0018 (233-314)||(178819-178898)
[»] scaffold0050 (1 HSPs)
scaffold0050 (231-265)||(70304-70338)
[»] scaffold0019 (1 HSPs)
scaffold0019 (232-332)||(71679-71784)
[»] scaffold0011 (1 HSPs)
scaffold0011 (233-267)||(17750-17784)
[»] scaffold0116 (1 HSPs)
scaffold0116 (304-333)||(9841-9870)
[»] scaffold0049 (2 HSPs)
scaffold0049 (304-333)||(63708-63737)
scaffold0049 (233-265)||(63799-63831)
[»] scaffold0009 (1 HSPs)
scaffold0009 (202-231)||(188483-188512)
[»] scaffold0007 (1 HSPs)
scaffold0007 (277-314)||(225310-225347)
[»] scaffold0086 (2 HSPs)
scaffold0086 (277-317)||(2900-2940)
scaffold0086 (201-229)||(3024-3052)
[»] scaffold0044 (1 HSPs)
scaffold0044 (235-267)||(53204-53236)


Alignment Details
Target: chr4 (Bit Score: 68; Significance: 3e-30; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 200 - 330
Target Start/End: Complemental strand, 30299043 - 30298910
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccg-----acaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtc 294  Q
    |||||||||||||||||||||||| |||||||||     |||||||||||||||||||||||||||||||| |         ||||||||||||||||||    
T  30299043 aagcacggacactcctcggattagacgtgtcccggcacgacaccgacacttgtaattacactgaattatgtca--tttttttcaaattattagctgtgtc 30298946  T
Q  295 agcgtgtcagtgtccgtgtccgtatccgtgcttcat 330  Q
     ||||||||||||||||||||||||| |||||||||    
T  30298945 ggcgtgtcagtgtccgtgtccgtatctgtgcttcat 30298910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 200 - 330
Target Start/End: Complemental strand, 30327911 - 30327778
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccg-----acaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtc 294  Q
    |||||||||||||||||||||||| |||||||||     |||||||||||||||||||||||||||||||| |         ||||||||||||||||||    
T  30327911 aagcacggacactcctcggattagacgtgtcccggcacgacaccgacacttgtaattacactgaattatgtca--tttttttcaaattattagctgtgtc 30327814  T
Q  295 agcgtgtcagtgtccgtgtccgtatccgtgcttcat 330  Q
     ||||||||||||||||||||||||| |||||||||    
T  30327813 ggcgtgtcagtgtccgtgtccgtatctgtgcttcat 30327778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 232 - 331
Target Start/End: Original strand, 12895116 - 12895211
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtccgtatccgtgcttcata 331  Q
    ||||||||||||||||||||||  ||||||||||||         ||||||||||||||| || ||||||| ||||||||||||||||| ||||||||||    
T  12895116 cgacaccgacacttgtaattactttgaattatgtgatttttt---caaattattagctgtttcggcgtgtc-gtgtccgtgtccgtatctgtgcttcata 12895211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 231 - 314
Target Start/End: Original strand, 23292985 - 23293065
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtc 314  Q
    |||||||||||||||||||||| ||||||||||||||         |||||||||||||||||| |||||||| ||||||||||    
T  23292985 ccgacaccgacacttgtaattatactgaattatgtga---ttttttcaaattattagctgtgtcggcgtgtcattgtccgtgtc 23293065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 231 - 332
Target Start/End: Complemental strand, 49431086 - 49430982
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtc-----cgtgtccgtatccgtgc 325  Q
    ||||||||||||||| |||||||||||||||||||||         |||||||||||||||||| |||||||| ||||     ||||||||| |||||||    
T  49431086 ccgacaccgacacttttaattacactgaattatgtga--tttttttcaaattattagctgtgtcggcgtgtcactgtccgagtcgtgtccgtgtccgtgc 49430989  T
Q  326 ttcatag 332  Q
    |||||||    
T  49430988 ttcatag 49430982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 331
Target Start/End: Original strand, 12797337 - 12797438
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtg-----tccgtatccgtgc 325  Q
    |||||||||||||||||||||||||||||||||||||         ||||||||||| | || | |||||||||||||||||     |||||||||||||    
T  12797337 ccgacaccgacacttgtaattacactgaattatgtga----tttttcaaattattagttttgccggcgtgtcagtgtccgtgtcgtatccgtatccgtgc 12797432  T
Q  326 ttcata 331  Q
    ||||||    
T  12797433 ttcata 12797438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 42640589 - 42640513
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgt 307  Q
    |||||||||||||||||||||||||||||||||||||         |||||||| ||||||||| ||||||| ||||    
T  42640589 ccgacaccgacacttgtaattacactgaattatgtgatttttttttcaaattatcagctgtgtcggcgtgtccgtgt 42640513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 314
Target Start/End: Complemental strand, 21945563 - 21945483
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtc 314  Q
    ||||||||||||||||||||||||||||||||||| |         |||||||||||||||||| || |||||||||| |||||    
T  21945563 ccgacaccgacacttgtaattacactgaattatgtca---ttttttcaaattattagctgtgtcggcatgtcagtgtctgtgtc 21945483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 234 - 332
Target Start/End: Complemental strand, 29205501 - 29205408
Alignment:
Q  234 acaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtccgtatccgtgcttcatag 332  Q
    ||||||||||||||||||||||||||||||||||         |||||||||||| ||||    ||||| |||||| ||||||||||||||||||||||    
T  29205501 acaccgacacttgtaattacactgaattatgtga---ttttttcaaattattagccgtgt--tggtgtccgtgtccatgtccgtatccgtgcttcatag 29205408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 5775309 - 5775342
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccg 233  Q
    ||||||||||||||||||||||||||||||||||    
T  5775309 aagcacggacactcctcggattaggcgtgtcccg 5775342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 264
Target Start/End: Complemental strand, 16073454 - 16073421
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatg 264  Q
    ||||||||||||||||||||||||||||||||||    
T  16073454 ccgacaccgacacttgtaattacactgaattatg 16073421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 23292931 - 23292964
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccg 233  Q
    ||||||||||||||||||||||||||||||||||    
T  23292931 aagcacggacactcctcggattaggcgtgtcccg 23292964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 200 - 237
Target Start/End: Complemental strand, 28470479 - 28470442
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccgacac 237  Q
    |||||||||||||||||||||||||| |||||||||||    
T  28470479 aagcacggacactcctcggattaggcatgtcccgacac 28470442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 232
Target Start/End: Original strand, 715550 - 715582
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtccc 232  Q
    |||||||||||||||||||||||||||||||||    
T  715550 aagcacggacactcctcggattaggcgtgtccc 715582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 232
Target Start/End: Original strand, 752876 - 752908
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtccc 232  Q
    |||||||||||||||||||||||||||||||||    
T  752876 aagcacggacactcctcggattaggcgtgtccc 752908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 267
Target Start/End: Original strand, 6879464 - 6879500
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtga 267  Q
    |||||||||||||||||||||||||| ||||||||||    
T  6879464 ccgacaccgacacttgtaattacacttaattatgtga 6879500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 278 - 333
Target Start/End: Complemental strand, 24543997 - 24543941
Alignment:
Q  278 aaattattagctgtgtcagcgtgtcagtgtc-cgtgtccgtatccgtgcttcatagg 333  Q
    |||||||||| |||||| |||||||||||||  |||||||||||| |||||||||||    
T  24543997 aaattattagttgtgtcggcgtgtcagtgtctggtgtccgtatccatgcttcatagg 24543941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 232
Target Start/End: Complemental strand, 28084638 - 28084606
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtccc 232  Q
    |||||||||||||||||||||||||||||||||    
T  28084638 aagcacggacactcctcggattaggcgtgtccc 28084606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 267
Target Start/End: Original strand, 28964247 - 28964283
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtga 267  Q
    ||||||| |||||||||||||||||||||||||||||    
T  28964247 ccgacacagacacttgtaattacactgaattatgtga 28964283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 267
Target Start/End: Original strand, 54580022 - 54580058
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtga 267  Q
    ||||||||||||||| |||||||||||||||||||||    
T  54580022 ccgacaccgacacttataattacactgaattatgtga 54580058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 200 - 231
Target Start/End: Complemental strand, 4383480 - 4383449
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcc 231  Q
    ||||||||||||||||||||||||||||||||    
T  4383480 aagcacggacactcctcggattaggcgtgtcc 4383449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 267
Target Start/End: Original strand, 11596352 - 11596387
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtga 267  Q
    ||||||| ||||||||||||||||||||||||||||    
T  11596352 cgacacctacacttgtaattacactgaattatgtga 11596387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 200 - 231
Target Start/End: Original strand, 22440562 - 22440593
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcc 231  Q
    ||||||||||||||||||||||||||||||||    
T  22440562 aagcacggacactcctcggattaggcgtgtcc 22440593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 267
Target Start/End: Original strand, 715608 - 715642
Alignment:
Q  233 gacaccgacacttgtaattacactgaattatgtga 267  Q
    |||||| ||||||||||||||||||||||||||||    
T  715608 gacaccaacacttgtaattacactgaattatgtga 715642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 267
Target Start/End: Original strand, 752934 - 752968
Alignment:
Q  233 gacaccgacacttgtaattacactgaattatgtga 267  Q
    |||||| ||||||||||||||||||||||||||||    
T  752934 gacaccaacacttgtaattacactgaattatgtga 752968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 230
Target Start/End: Original strand, 3064873 - 3064903
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtc 230  Q
    |||||||||||||||||||||||||||||||    
T  3064873 aagcacggacactcctcggattaggcgtgtc 3064903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 234
Target Start/End: Original strand, 11596302 - 11596336
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccga 234  Q
    ||||||||||||||||| |||||||||||||||||    
T  11596302 aagcacggacactcctcagattaggcgtgtcccga 11596336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 234
Target Start/End: Original strand, 12895219 - 12895253
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccga 234  Q
    ||||||| |||||||||||||||||||||||||||    
T  12895219 aagcacgaacactcctcggattaggcgtgtcccga 12895253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 263
Target Start/End: Original strand, 28000743 - 28000773
Alignment:
Q  233 gacaccgacacttgtaattacactgaattat 263  Q
    |||||||||||||||||||||||||||||||    
T  28000743 gacaccgacacttgtaattacactgaattat 28000773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 254
Target Start/End: Complemental strand, 30094126 - 30094066
Alignment:
Q  201 agcacggacactcctcggattaggcgtgtc-------ccgacaccgacacttgtaattaca 254  Q
    ||||||||||||| ||||||||||||||||       ||||||||||||||||||||||||    
T  30094126 agcacggacactcttcggattaggcgtgtcccggtgtccgacaccgacacttgtaattaca 30094066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 267
Target Start/End: Original strand, 6485613 - 6485646
Alignment:
Q  234 acaccgacacttgtaattacactgaattatgtga 267  Q
    ||||||||||||||||||||||| ||||||||||    
T  6485613 acaccgacacttgtaattacactaaattatgtga 6485646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 333
Target Start/End: Original strand, 22234954 - 22234983
Alignment:
Q  304 gtgtccgtgtccgtatccgtgcttcatagg 333  Q
    ||||||||||||||||||||||||||||||    
T  22234954 gtgtccgtgtccgtatccgtgcttcatagg 22234983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 36635444 - 36635411
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccg 233  Q
    |||||||||||||| |||||||||||||||||||    
T  36635444 aagcacggacactcttcggattaggcgtgtcccg 36635411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 40784067 - 40784034
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccg 233  Q
    ||||||||||||||||||||||||| ||||||||    
T  40784067 aagcacggacactcctcggattaggtgtgtcccg 40784034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 53381535 - 53381568
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccg 233  Q
    ||||||||||||||||||||||||| ||||||||    
T  53381535 aagcacggacactcctcggattaggtgtgtcccg 53381568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 264
Target Start/End: Original strand, 3947766 - 3947798
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatg 264  Q
    |||||| ||||||||||||||||||||||||||    
T  3947766 cgacactgacacttgtaattacactgaattatg 3947798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 332
Target Start/End: Complemental strand, 4157130 - 4157102
Alignment:
Q  304 gtgtccgtgtccgtatccgtgcttcatag 332  Q
    |||||||||||||||||||||||||||||    
T  4157130 gtgtccgtgtccgtatccgtgcttcatag 4157102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 267
Target Start/End: Complemental strand, 4157209 - 4157173
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtga 267  Q
    ||||||||||||||||||||| |||| ||||||||||    
T  4157209 ccgacaccgacacttgtaattgcactaaattatgtga 4157173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 267
Target Start/End: Complemental strand, 4157496 - 4157460
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtga 267  Q
    ||||||||||||||||||||| |||| ||||||||||    
T  4157496 ccgacaccgacacttgtaattgcactaaattatgtga 4157460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 332
Target Start/End: Complemental strand, 7970535 - 7970483
Alignment:
Q  280 attattagctgtgtcagcgtgtcagtgtccgtgtccgtatccgtgcttcatag 332  Q
    |||||| || |||||||| |||||||||| ||||||| ||| |||||||||||    
T  7970535 attattggcggtgtcagcatgtcagtgtctgtgtccggatctgtgcttcatag 7970483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 267
Target Start/End: Original strand, 8423717 - 8423753
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtga 267  Q
    |||||||||||| || |||||||||||||||||||||    
T  8423717 ccgacaccgacatttataattacactgaattatgtga 8423753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 240
Target Start/End: Original strand, 18844428 - 18844467
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccgacaccga 240  Q
    ||||||||||||| |||||||||||||||| ||||||||||    
T  18844428 aagcacggacacttctcggattaggcgtgt-ccgacaccga 18844467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 332
Target Start/End: Complemental strand, 20633457 - 20633429
Alignment:
Q  304 gtgtccgtgtccgtatccgtgcttcatag 332  Q
    |||||||||||||||||||||||||||||    
T  20633457 gtgtccgtgtccgtatccgtgcttcatag 20633429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 232
Target Start/End: Original strand, 28964193 - 28964225
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtccc 232  Q
    ||||| |||||||||||||||||||||||||||    
T  28964193 aagcatggacactcctcggattaggcgtgtccc 28964225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 232
Target Start/End: Complemental strand, 29205582 - 29205550
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtccc 232  Q
    ||||||| |||||||||||||||||||||||||    
T  29205582 aagcacgaacactcctcggattaggcgtgtccc 29205550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 330
Target Start/End: Original strand, 35723427 - 35723484
Alignment:
Q  277 caaattattagctgtgtcagcgtgtcagtgtc----cgtgtccgtatccgtgcttcat 330  Q
    |||||||||||| ||||| |||||||||||||    |||||||||||| |||||||||    
T  35723427 caaattattagcggtgtcggcgtgtcagtgtcatgtcgtgtccgtatcggtgcttcat 35723484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 64; Significance: 6e-28; HSPs: 56)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 124 - 191
Target Start/End: Complemental strand, 1694376 - 1694309
Alignment:
Q  124 tactctcatattccaaggttttattgagaagaattggctattttttacctttcacaacctccatcatg 191  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  1694376 tactctcatattccaaggttttattgagaagaattggctattttttacctttcacaacctctatcatg 1694309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 231 - 331
Target Start/End: Complemental strand, 28152158 - 28152062
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtccgtatccgtgcttcat 330  Q
    |||||||||||||||||||||||||||||||||||||         ||||||||||||| |||| |||||||||||||||||||| ||||||||||||||    
T  28152158 ccgacaccgacacttgtaattacactgaattatgtgattttt----caaattattagctttgtcggcgtgtcagtgtccgtgtccatatccgtgcttcat 28152063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 231 - 334
Target Start/End: Original strand, 17841588 - 17841688
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtccgtatccgtgcttcat 330  Q
    ||||||||| |||||||||||||||| ||||||||||         |||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  17841588 ccgacaccgtcacttgtaattacactaaattatgtgatttttt---caaattattagctgtgtcggcgtgtcagtgtccgtgtccgtatcagtgcttcat 17841684  T
Q  331 aggg 334  Q
    ||||    
T  17841685 aggg 17841688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 200 - 314
Target Start/End: Original strand, 426483 - 426593
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgt 299  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||| | ||||||||||         |||||||||| ||||||| ||||    
T  426483 aagcacggacactcctcagattaggcgtgtcc-gacaccgacacttgtaattacatttaattatgtga---ttttttcaaattattaactgtgtcggcgt 426578  T
Q  300 gtcagtgtccgtgtc 314  Q
    |||||||||||||||    
T  426579 gtcagtgtccgtgtc 426593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 208 - 331
Target Start/End: Original strand, 7801132 - 7801259
Alignment:
Q  208 acactcctcggattaggcgtgtcccgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtg- 306  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||         ||||||||||| |||||| |||||| ||||     
T  7801132 acactcttcggattaggcgtgtcccgacaccgacacttgtaattacgctgaattatgtga---ttttttcaaattattagttgtgtcggcgtgttagtgt 7801228  T
Q  307 ------tccgtgtccgtatccgtgcttcata 331  Q
          |||||||||||||||||||||||||    
T  7801229 tcggtatccgtgtccgtatccgtgcttcata 7801259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 232 - 333
Target Start/End: Original strand, 10770674 - 10770777
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtc-----cgtgtccgtatccgtgct 326  Q
    ||||||||||||||||||||||||||||||||||||         ||||||||||| |||||  |||||||||||||     ||||||||||||||||||    
T  10770674 cgacaccgacacttgtaattacactgaattatgtga---ttttttcaaattattagttgtgttggcgtgtcagtgtccatgtcgtgtccgtatccgtgct 10770770  T
Q  327 tcatagg 333  Q
    |||||||    
T  10770771 tcatagg 10770777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 232 - 314
Target Start/End: Complemental strand, 16766756 - 16766677
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtc 314  Q
    ||||||||||||||||||||||||||||||||||||         |||||||||||||||||| |||||||||||||| ||||    
T  16766756 cgacaccgacacttgtaattacactgaattatgtga---ttttttcaaattattagctgtgtcggcgtgtcagtgtccatgtc 16766677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 239 - 332
Target Start/End: Complemental strand, 17302609 - 17302518
Alignment:
Q  239 gacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtccgtatccgtgcttcatag 332  Q
    |||||||||||||||| ||||||||||||         ||||||||||| ||||||||||||||||||| |||||||||||| | |||||||||    
T  17302609 gacacttgtaattacattgaattatgtgattttttt--caaattattagttgtgtcagcgtgtcagtgttcgtgtccgtatctgcgcttcatag 17302518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 267
Target Start/End: Original strand, 5732479 - 5732545
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccgacaccgacacttgtaattacactgaattatgtga 267  Q
    ||||| |||||||||||||||||||||||| ||||||||||||| | |||||||||| || |||||||    
T  5732479 aagcatggacactcctcggattaggcgtgt-ccgacaccgacacatataattacactaaaatatgtga 5732545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 231 - 314
Target Start/End: Complemental strand, 34595194 - 34595114
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtc 314  Q
    |||||||||||||||||||||||||||||||||||||         ||||||||||| |||||| |||||||| ||||||||||    
T  34595194 ccgacaccgacacttgtaattacactgaattatgtga---ttttttcaaattattagttgtgtcggcgtgtcattgtccgtgtc 34595114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 232 - 314
Target Start/End: Original strand, 8365519 - 8365598
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtc 314  Q
    |||||||||||||||||||||||| |||||||||||         ||||||||||| |||||| |||||||||||||||||||    
T  8365519 cgacaccgacacttgtaattacaccgaattatgtga---tattttcaaattattagttgtgtcggcgtgtcagtgtccgtgtc 8365598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 232 - 314
Target Start/End: Original strand, 9107370 - 9107449
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtc 314  Q
    |||||||||||||||||||||||||||||| |||||         |||||||||||||||||| |||||| ||||||||||||    
T  9107370 cgacaccgacacttgtaattacactgaattttgtga---ttttttcaaattattagctgtgtcggcgtgttagtgtccgtgtc 9107449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 232 - 314
Target Start/End: Complemental strand, 12696383 - 12696304
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtc 314  Q
    |||||| ||||||||||||||||||||||||||| |         |||||||||||||||||| |||||||||||||||||||    
T  12696383 cgacactgacacttgtaattacactgaattatgtaatttttt---caaattattagctgtgtcggcgtgtcagtgtccgtgtc 12696304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 208 - 267
Target Start/End: Complemental strand, 7027323 - 7027266
Alignment:
Q  208 acactcctcggattaggcgtgtcccgacaccgacacttgtaattacactgaattatgtga 267  Q
    ||||| |||||||||||||||||  ||||||||||| | |||||||||||||||||||||    
T  7027323 acacttctcggattaggcgtgtc--gacaccgacacatataattacactgaattatgtga 7027266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 208 - 267
Target Start/End: Original strand, 9911495 - 9911563
Alignment:
Q  208 acactcctcggattaggcgtgtcc---------cgacaccgacacttgtaattacactgaattatgtga 267  Q
    ||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||    
T  9911495 acactcctcggattaggcgtgtcctggttgacacgacaccgacacttgtaattacactgaattatgtga 9911563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 200 - 314
Target Start/End: Complemental strand, 7938214 - 7938096
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccg-------acaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtg 292  Q
    ||||||||||||||||||||| ||||||||| ||       |||||||||||| |||||||||| |||||| |||         ||||||||||||||||    
T  7938214 aagcacggacactcctcggatcaggcgtgtctcggtgtcggacaccgacacttataattacactaaattatatgatttttt---caaattattagctgtg 7938118  T
Q  293 tcagcgtgtcagtgtccgtgtc 314  Q
    || |||||||||||||| ||||    
T  7938117 tcggcgtgtcagtgtccatgtc 7938096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 314
Target Start/End: Original strand, 7977829 - 7977909
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtc 314  Q
    ||||||||||||||||||||||||||||||||||| |         |||||||||||||||||| |||||||||| ||| ||||    
T  7977829 ccgacaccgacacttgtaattacactgaattatgtaa---ttttttcaaattattagctgtgtcggcgtgtcagtatccatgtc 7977909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 314
Target Start/End: Original strand, 8776972 - 8777052
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtc 314  Q
    |||||||| |||||||||||||||||||||| |||||         ||||||||||| |||||| |||||||||||||||||||    
T  8776972 ccgacaccaacacttgtaattacactgaattttgtgatttttt---caaattattagttgtgtcggcgtgtcagtgtccgtgtc 8777052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 314
Target Start/End: Complemental strand, 3398677 - 3398599
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtc 314  Q
    ||||||||| |||| ||||||||||||||||| |||         |||||||||||||||||| |||||||||||||||||||    
T  3398677 cgacaccgatacttataattacactgaattatatgattttt----caaattattagctgtgtcggcgtgtcagtgtccgtgtc 3398599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 265
Target Start/End: Complemental strand, 28715355 - 28715321
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgt 265  Q
    |||||||||||||||||||||||||||||||||||    
T  28715355 ccgacaccgacacttgtaattacactgaattatgt 28715321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 234 - 267
Target Start/End: Complemental strand, 9522948 - 9522915
Alignment:
Q  234 acaccgacacttgtaattacactgaattatgtga 267  Q
    ||||||||||||||||||||||||||||||||||    
T  9522948 acaccgacacttgtaattacactgaattatgtga 9522915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 234 - 330
Target Start/End: Complemental strand, 16833365 - 16833267
Alignment:
Q  234 acaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtc-----cgtgtccgtatccgtgcttc 328  Q
    |||||||||||||||||||||||||| |||||||         ||||||||||| |||||| |||||||||||||     |||||||||||| |||||||    
T  16833365 acaccgacacttgtaattacactgaagtatgtga---ttttttcaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgtccgtatcagtgcttc 16833269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 263
Target Start/End: Original strand, 16388216 - 16388248
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattat 263  Q
    |||||||||||||||||||||||||||||||||    
T  16388216 ccgacaccgacacttgtaattacactgaattat 16388248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 232
Target Start/End: Original strand, 17327595 - 17327627
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtccc 232  Q
    |||||||||||||||||||||||||||||||||    
T  17327595 aagcacggacactcctcggattaggcgtgtccc 17327627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 200 - 231
Target Start/End: Complemental strand, 4878056 - 4878025
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcc 231  Q
    ||||||||||||||||||||||||||||||||    
T  4878056 aagcacggacactcctcggattaggcgtgtcc 4878025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 277 - 332
Target Start/End: Complemental strand, 10842549 - 10842494
Alignment:
Q  277 caaattattagctgtgtcagcgtgtcagtgtccgtgtccgtatccgtgcttcatag 332  Q
    |||||||||||| ||||| ||||||| |||||  ||||||| ||||||||||||||    
T  10842549 caaattattagcggtgtcggcgtgtccgtgtcaatgtccgtgtccgtgcttcatag 10842494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 267
Target Start/End: Complemental strand, 31384979 - 31384944
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtga 267  Q
    |||||| |||||||||||||||||||||||||||||    
T  31384979 cgacactgacacttgtaattacactgaattatgtga 31384944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 231 - 266
Target Start/End: Original strand, 32978898 - 32978933
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtg 266  Q
    |||||||||||||||||||||||||| |||||||||    
T  32978898 ccgacaccgacacttgtaattacacttaattatgtg 32978933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 265
Target Start/End: Original strand, 6898280 - 6898314
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgt 265  Q
    |||||||||||||||||||||||||| ||||||||    
T  6898280 ccgacaccgacacttgtaattacacttaattatgt 6898314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 314
Target Start/End: Complemental strand, 9027237 - 9027158
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtc 314  Q
    |||||||||||| | ||||||||| |||||||||||         |||||||||||| ||||| |||||||||||||||||||    
T  9027237 cgacaccgacacatataattacacggaattatgtgattatct---caaattattagcggtgtcggcgtgtcagtgtccgtgtc 9027158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 332
Target Start/End: Complemental strand, 17435215 - 17435162
Alignment:
Q  278 aaattattagctgtgtcagcgtgtcagtgtccgtgtccgtatccgtgcttcatag 332  Q
    |||||||||||| ||||  ||| ||||||||||||| ||||||||||||||||||    
T  17435215 aaattattagctatgtcgacgtatcagtgtccgtgt-cgtatccgtgcttcatag 17435162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 230
Target Start/End: Original strand, 17841534 - 17841564
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtc 230  Q
    |||||||||||||||||||||||||||||||    
T  17841534 aagcacggacactcctcggattaggcgtgtc 17841564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 265
Target Start/End: Original strand, 26402679 - 26402713
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgt 265  Q
    ||||||||||||||||| |||||||||||||||||    
T  26402679 ccgacaccgacacttgtgattacactgaattatgt 26402713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 332
Target Start/End: Original strand, 34225886 - 34225916
Alignment:
Q  302 cagtgtccgtgtccgtatccgtgcttcatag 332  Q
    |||||||||||||||||||||||||||||||    
T  34225886 cagtgtccgtgtccgtatccgtgcttcatag 34225916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 3209442 - 3209367
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtc 308  Q
    |||||||||||||||||||| ||||| ||||||||||         |||||||||||||||||| ||||||| |||||    
T  3209442 ccgacaccgacacttgtaataacactaaattatgtga--tttttttcaaattattagctgtgtcggcgtgtctgtgtc 3209367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 229
Target Start/End: Original strand, 7723204 - 7723233
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgt 229  Q
    ||||||||||||||||||||||||||||||    
T  7723204 aagcacggacactcctcggattaggcgtgt 7723233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 333
Target Start/End: Complemental strand, 7938088 - 7938059
Alignment:
Q  304 gtgtccgtgtccgtatccgtgcttcatagg 333  Q
    ||||||||||||||||||||||||||||||    
T  7938088 gtgtccgtgtccgtatccgtgcttcatagg 7938059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 8389413 - 8389446
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccg 233  Q
    ||||||||||||||||||||||||| ||||||||    
T  8389413 aagcacggacactcctcggattaggtgtgtcccg 8389446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 9025450 - 9025483
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccg 233  Q
    ||||||||||||| ||||||||||||||||||||    
T  9025450 aagcacggacacttctcggattaggcgtgtcccg 9025483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 265
Target Start/End: Original strand, 21395308 - 21395341
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgt 265  Q
    ||||||||||||||||||||||||| ||||||||    
T  21395308 cgacaccgacacttgtaattacactaaattatgt 21395341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 266
Target Start/End: Original strand, 27904037 - 27904070
Alignment:
Q  233 gacaccgacacttgtaattacactgaattatgtg 266  Q
    |||||||||| |||||||||||||||||||||||    
T  27904037 gacaccgacatttgtaattacactgaattatgtg 27904070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 31385044 - 31385011
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccg 233  Q
    |||||||||||||||| |||||||||||||||||    
T  31385044 aagcacggacactccttggattaggcgtgtcccg 31385011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 31959264 - 31959231
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccg 233  Q
    ||||||||||||||||||||||||| ||||||||    
T  31959264 aagcacggacactcctcggattaggtgtgtcccg 31959231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 34595248 - 34595215
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccg 233  Q
    ||||||||||||||||||||||||| ||||||||    
T  34595248 aagcacggacactcctcggattaggtgtgtcccg 34595215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 267
Target Start/End: Original strand, 403863 - 403899
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtga 267  Q
    |||||||||||||||||| ||||||| ||||||||||    
T  403863 ccgacaccgacacttgtagttacactaaattatgtga 403899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 267
Target Start/End: Original strand, 853858 - 853894
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtga 267  Q
    ||||||||||||||||||||| |||| ||||||||||    
T  853858 ccgacaccgacacttgtaattgcacttaattatgtga 853894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 267
Target Start/End: Complemental strand, 1700412 - 1700376
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtga 267  Q
    ||||||||||||||| ||||||||||||| |||||||    
T  1700412 ccgacaccgacacttataattacactgaaatatgtga 1700376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 267
Target Start/End: Complemental strand, 4878003 - 4877967
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtga 267  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  4878003 ccgacaccgacacttgtaattatacttaattatgtga 4877967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 267
Target Start/End: Original strand, 7265592 - 7265628
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtga 267  Q
    ||||||||||||| | |||||||||||||||||||||    
T  7265592 ccgacaccgacacatataattacactgaattatgtga 7265628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 232
Target Start/End: Original strand, 8365453 - 8365485
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtccc 232  Q
    ||||||||| |||||||||||||||||||||||    
T  8365453 aagcacggagactcctcggattaggcgtgtccc 8365485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 232
Target Start/End: Original strand, 8805529 - 8805561
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtccc 232  Q
    |||||||||||||||||||||||||| ||||||    
T  8805529 aagcacggacactcctcggattaggcatgtccc 8805561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 314
Target Start/End: Complemental strand, 9658895 - 9658859
Alignment:
Q  278 aaattattagctgtgtcagcgtgtcagtgtccgtgtc 314  Q
    ||||||||||| ||||| |||||||||||||||||||    
T  9658895 aaattattagcggtgtcggcgtgtcagtgtccgtgtc 9658859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 232
Target Start/End: Original strand, 10339059 - 10339091
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtccc 232  Q
    ||||||||||||||||| |||||||||||||||    
T  10339059 aagcacggacactcctccgattaggcgtgtccc 10339091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 332
Target Start/End: Complemental strand, 18367809 - 18367781
Alignment:
Q  304 gtgtccgtgtccgtatccgtgcttcatag 332  Q
    |||||||||||||||||||||||||||||    
T  18367809 gtgtccgtgtccgtatccgtgcttcatag 18367781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 317
Target Start/End: Original strand, 19147445 - 19147485
Alignment:
Q  277 caaattattagctgtgtcagcgtgtcagtgtccgtgtccgt 317  Q
    |||||||||||||||||| | |||||||||||||| |||||    
T  19147445 caaattattagctgtgtccgtgtgtcagtgtccgtatccgt 19147485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 267
Target Start/End: Original strand, 32511665 - 32511701
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtga 267  Q
    |||||||| |||||| |||||||||||||||||||||    
T  32511665 ccgacaccaacacttataattacactgaattatgtga 32511701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 2e-27; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 231 - 333
Target Start/End: Complemental strand, 37559037 - 37558938
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtccgtatccgtgcttcat 330  Q
    |||||||||||||||||||||||| ||||||||||||         |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  37559037 ccgacaccgacacttgtaattacattgaattatgtgattttta---caaattattagctgtgtcggcgtgtcagtgtccgtgtccgtatccgtgcttcat 37558941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 200 - 314
Target Start/End: Original strand, 19536366 - 19536477
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgt 299  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||         ||||||||||| |||||| ||||    
T  19536366 aagcatggacactcctcggattaggcgtgtcc-gacaccgacacttgtaattacactgaattatgtga--tttttttcaaattattagttgtgtcggcgt 19536462  T
Q  300 gtcagtgtccgtgtc 314  Q
    |||| ||||||||||    
T  19536463 gtcattgtccgtgtc 19536477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 203 - 263
Target Start/End: Original strand, 34691777 - 34691836
Alignment:
Q  203 cacggacactcctcggattaggcgtgtcccgacaccgacacttgtaattacactgaattat 263  Q
    ||||||||||||||||||||||||||| ||||||||||||| | |||||||||||||||||    
T  34691777 cacggacactcctcggattaggcgtgt-ccgacaccgacacatataattacactgaattat 34691836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 203 - 263
Target Start/End: Original strand, 34714189 - 34714248
Alignment:
Q  203 cacggacactcctcggattaggcgtgtcccgacaccgacacttgtaattacactgaattat 263  Q
    ||||||||||||||||||||||||||| ||||||||||||| | |||||||||||||||||    
T  34714189 cacggacactcctcggattaggcgtgt-ccgacaccgacacatataattacactgaattat 34714248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 200 - 267
Target Start/End: Original strand, 18255949 - 18256015
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccgacaccgacacttgtaattacactgaattatgtga 267  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||| |||||||| | ||||||||||    
T  18255949 aagcacggacactccttggattaggcgtgt-ccgacaccgacacttctaattacattaaattatgtga 18256015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 200 - 314
Target Start/End: Original strand, 20539637 - 20539753
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccg-----acaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtc 294  Q
    ||||||||||||||||||||| ||||||||| ||     ||||||||||||||||||||||| |||||| |||         ||||||||||||||||||    
T  20539637 aagcacggacactcctcggatcaggcgtgtctcgccacgacaccgacacttgtaattacactaaattatatgatttttt---caaattattagctgtgtc 20539733  T
Q  295 agcgtgtcagtgtccgtgtc 314  Q
      ||||||||||||||||||    
T  20539734 gacgtgtcagtgtccgtgtc 20539753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 233 - 334
Target Start/End: Original strand, 18841014 - 18841117
Alignment:
Q  233 gacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtc-----cgtgtccgtatccgtgctt 327  Q
    |||||||||||||||||||||||| |||||||| |         ||||||||||| ||||||||||||||||||||     ||||||||||| |||||||    
T  18841014 gacaccgacacttgtaattacacttaattatgtaatttttt---caaattattagttgtgtcagcgtgtcagtgtccatgtcgtgtccgtatacgtgctt 18841110  T
Q  328 cataggg 334  Q
    |||||||    
T  18841111 cataggg 18841117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 231 - 332
Target Start/End: Original strand, 30404849 - 30404952
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccg-----tgtccgtatccgtgc 325  Q
    ||||| |||||||||||||||||||||||||||||||         |||||||||| | ||||| |||||||||||||||     |||||||||||||||    
T  30404849 ccgacgccgacacttgtaattacactgaattatgtga---ttttttcaaattattaaccgtgtcggcgtgtcagtgtccgtgtcatgtccgtatccgtgc 30404945  T
Q  326 ttcatag 332  Q
    |||||||    
T  30404946 ttcatag 30404952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 200 - 332
Target Start/End: Complemental strand, 39323352 - 39323226
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgt 299  Q
    ||||||||||||||||| |||||||| ||||| |     ||||||||||||||||||||||||||| |         |||||||||||| |||||  |||    
T  39323352 aagcacggacactcctcagattaggcctgtccaggt---gacacttgtaattacactgaattatgtaattttgt---caaattattagcggtgtcgacgt 39323259  T
Q  300 gtcagtgtccgtgtccgtatccgtgcttcatag 332  Q
     ||||||||||||||||||| ||||||| ||||    
T  39323258 ttcagtgtccgtgtccgtattcgtgctttatag 39323226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 332
Target Start/End: Complemental strand, 37419802 - 37419704
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccg-tgtccgtatccgtgcttcat 330  Q
    |||||||| ||||||||||||||||||||| |||||         ||||||||| ||  |||| ||||||||||||||| ||||||||||||||||||||    
T  37419802 cgacaccggcacttgtaattacactgaattttgtgatttttt---caaattatttgccatgtcggcgtgtcagtgtccggtgtccgtatccgtgcttcat 37419706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 231 - 267
Target Start/End: Original strand, 2438718 - 2438754
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtga 267  Q
    |||||||||||||||||||||||||||||||||||||    
T  2438718 ccgacaccgacacttgtaattacactgaattatgtga 2438754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 267
Target Start/End: Complemental strand, 18422022 - 18421987
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtga 267  Q
    ||||||||||||||||||||||||||||||||||||    
T  18422022 cgacaccgacacttgtaattacactgaattatgtga 18421987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 200 - 265
Target Start/End: Original strand, 34221468 - 34221530
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccgacaccgacacttgtaattacactgaattatgt 265  Q
    ||||||||| ||||||||||||||||||||||||   ||||||||||||||| ||  |||||||||    
T  34221468 aagcacggaaactcctcggattaggcgtgtcccg---ccgacacttgtaattgcatagaattatgt 34221530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 2438664 - 2438697
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccg 233  Q
    ||||||||||||||||||||||||||||||||||    
T  2438664 aagcacggacactcctcggattaggcgtgtcccg 2438697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 233 - 314
Target Start/End: Original strand, 11223864 - 11223942
Alignment:
Q  233 gacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtc 314  Q
    ||||||||||||||||||||||||||||||||| |         |||| ||||||||||||||||||||| |||||| ||||    
T  11223864 gacaccgacacttgtaattacactgaattatgtta---ttttttcaaaatattagctgtgtcagcgtgtctgtgtccatgtc 11223942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 233 - 314
Target Start/End: Original strand, 14996224 - 14996303
Alignment:
Q  233 gacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtc 314  Q
    |||||||||||||||||||||||| |||||| |||         |||||||||||||||||| || ||||||||||||||||    
T  14996224 gacaccgacacttgtaattacactaaattatatgattttttt--caaattattagctgtgtcggcttgtcagtgtccgtgtc 14996303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 316
Target Start/End: Original strand, 21374706 - 21374780
Alignment:
Q  239 gacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtccg 316  Q
    ||||||||||||||||||||||||||| |         |||||||||||||||||| |||||| ||||||||||||||    
T  21374706 gacacttgtaattacactgaattatgtaatttttt---caaattattagctgtgtcggcgtgttagtgtccgtgtccg 21374780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 264
Target Start/End: Complemental strand, 21624327 - 21624294
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatg 264  Q
    ||||||||||||||||||||||||||||||||||    
T  21624327 ccgacaccgacacttgtaattacactgaattatg 21624294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 37419868 - 37419835
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccg 233  Q
    ||||||||||||||||||||||||||||||||||    
T  37419868 aagcacggacactcctcggattaggcgtgtcccg 37419835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 267
Target Start/End: Complemental strand, 5040794 - 5040758
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtga 267  Q
    |||||||||||||||||||||||| ||||||||||||    
T  5040794 ccgacaccgacacttgtaattacattgaattatgtga 5040758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 278 - 314
Target Start/End: Complemental strand, 6940271 - 6940235
Alignment:
Q  278 aaattattagctgtgtcagcgtgtcagtgtccgtgtc 314  Q
    ||||||||||||||||| |||||||||||||||||||    
T  6940271 aaattattagctgtgtcggcgtgtcagtgtccgtgtc 6940235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 232
Target Start/End: Complemental strand, 26769636 - 26769604
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtccc 232  Q
    |||||||||||||||||||||||||||||||||    
T  26769636 aagcacggacactcctcggattaggcgtgtccc 26769604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 267
Target Start/End: Complemental strand, 44635558 - 44635522
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtga 267  Q
    |||||||||||||||||||||||||||||||| ||||    
T  44635558 ccgacaccgacacttgtaattacactgaattacgtga 44635522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 267
Target Start/End: Complemental strand, 974806 - 974771
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtga 267  Q
    ||||||||||||||||||||||||||||| ||||||    
T  974806 cgacaccgacacttgtaattacactgaataatgtga 974771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 267
Target Start/End: Complemental strand, 15657923 - 15657888
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtga 267  Q
    ||||||||||| ||||||||||||||||||||||||    
T  15657923 cgacaccgacatttgtaattacactgaattatgtga 15657888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 231 - 314
Target Start/End: Complemental strand, 15972933 - 15972853
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtc 314  Q
    ||||||||||||||||||||||||||||||| ||| |         ||||||||||  |||||| |||||||||||||||||||    
T  15972933 ccgacaccgacacttgtaattacactgaattgtgtaa---ttttttcaaattattaattgtgtcggcgtgtcagtgtccgtgtc 15972853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 277 - 332
Target Start/End: Original strand, 19580323 - 19580378
Alignment:
Q  277 caaattattagctgtgtcagcgtgtcagtgtccgtgtccgtatccgtgcttcatag 332  Q
    |||||||||| ||||| | | || ||||||||||||||||||||||| ||||||||    
T  19580323 caaattattaactgtgacggtgtatcagtgtccgtgtccgtatccgtacttcatag 19580378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 267
Target Start/End: Original strand, 23058442 - 23058477
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtga 267  Q
    |||||||||||||||||||||||||| |||||||||    
T  23058442 cgacaccgacacttgtaattacactggattatgtga 23058477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 278 - 313
Target Start/End: Complemental strand, 24894405 - 24894370
Alignment:
Q  278 aaattattagctgtgtcagcgtgtcagtgtccgtgt 313  Q
    ||||||||||||||||| ||||||||||||||||||    
T  24894405 aaattattagctgtgtcggcgtgtcagtgtccgtgt 24894370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 334
Target Start/End: Complemental strand, 27084259 - 27084228
Alignment:
Q  303 agtgtccgtgtccgtatccgtgcttcataggg 334  Q
    ||||||||||||||||||||||||||||||||    
T  27084259 agtgtccgtgtccgtatccgtgcttcataggg 27084228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 267
Target Start/End: Original strand, 30717530 - 30717565
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtga 267  Q
    ||||| ||||||||||||||||||||||||||||||    
T  30717530 cgacatcgacacttgtaattacactgaattatgtga 30717565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 267
Target Start/End: Complemental strand, 33153483 - 33153448
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtga 267  Q
    |||||| |||||||||||||||||||||||||||||    
T  33153483 cgacacggacacttgtaattacactgaattatgtga 33153448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 234
Target Start/End: Complemental strand, 17776712 - 17776678
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccga 234  Q
    |||||||||||||||||||||||||| ||||||||    
T  17776712 aagcacggacactcctcggattaggcctgtcccga 17776678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 233
Target Start/End: Original strand, 23354589 - 23354619
Alignment:
Q  203 cacggacactcctcggattaggcgtgtcccg 233  Q
    |||||||||||||||||||||||||||||||    
T  23354589 cacggacactcctcggattaggcgtgtcccg 23354619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 11223798 - 11223831
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccg 233  Q
    ||||||||||||||||| ||||||||||||||||    
T  11223798 aagcacggacactcctcagattaggcgtgtcccg 11223831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 265
Target Start/End: Original strand, 12668423 - 12668456
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgt 265  Q
    |||||||||||||| |||||||||||||||||||    
T  12668423 cgacaccgacacttataattacactgaattatgt 12668456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 314
Target Start/End: Original strand, 12940977 - 12941014
Alignment:
Q  277 caaattattagctgtgtcagcgtgtcagtgtccgtgtc 314  Q
    ||||||||||| ||||||| ||||||||||||||||||    
T  12940977 caaattattagttgtgtcaacgtgtcagtgtccgtgtc 12941014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 18840958 - 18840991
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccg 233  Q
    ||||||||||||||||||||||||| ||||||||    
T  18840958 aagcacggacactcctcggattaggtgtgtcccg 18840991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 19942379 - 19942346
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccg 233  Q
    ||||| ||||||||||||||||||||||||||||    
T  19942379 aagcatggacactcctcggattaggcgtgtcccg 19942346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 23058389 - 23058422
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccg 233  Q
    ||||||||||||| ||||||||||||||||||||    
T  23058389 aagcacggacacttctcggattaggcgtgtcccg 23058422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 23354929 - 23354962
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccg 233  Q
    ||||| ||||||||||||||||||||||||||||    
T  23354929 aagcaaggacactcctcggattaggcgtgtcccg 23354962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 333
Target Start/End: Complemental strand, 26769489 - 26769460
Alignment:
Q  304 gtgtccgtgtccgtatccgtgcttcatagg 333  Q
    ||||||||||||||||||||||||||||||    
T  26769489 gtgtccgtgtccgtatccgtgcttcatagg 26769460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 333
Target Start/End: Original strand, 27447088 - 27447117
Alignment:
Q  304 gtgtccgtgtccgtatccgtgcttcatagg 333  Q
    ||||||||||||||||||||||||||||||    
T  27447088 gtgtccgtgtccgtatccgtgcttcatagg 27447117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 265
Target Start/End: Complemental strand, 33884110 - 33884077
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgt 265  Q
    ||||||||||||||||||||||||||||| ||||    
T  33884110 cgacaccgacacttgtaattacactgaatcatgt 33884077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 265
Target Start/End: Original strand, 36756344 - 36756377
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgt 265  Q
    |||||||||||||| |||||||||||||||||||    
T  36756344 cgacaccgacacttataattacactgaattatgt 36756377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 38117104 - 38117137
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccg 233  Q
    |||||||||||| |||||||||||||||||||||    
T  38117104 aagcacggacacccctcggattaggcgtgtcccg 38117137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 332
Target Start/End: Complemental strand, 41843444 - 41843403
Alignment:
Q  291 tgtcagcgtgtcagtgtccgtgtccgtatccgtgcttcatag 332  Q
    |||| |||||||||||||||||| | ||||||||||||||||    
T  41843444 tgtcggcgtgtcagtgtccgtgttcatatccgtgcttcatag 41843403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 332
Target Start/End: Original strand, 44770206 - 44770235
Alignment:
Q  303 agtgtccgtgtccgtatccgtgcttcatag 332  Q
    ||||||||||||||||||||||||||||||    
T  44770206 agtgtccgtgtccgtatccgtgcttcatag 44770235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 232
Target Start/End: Original strand, 3444831 - 3444863
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtccc 232  Q
    |||||||||||||||||||||||||| ||||||    
T  3444831 aagcacggacactcctcggattaggcatgtccc 3444863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 267
Target Start/End: Complemental strand, 5367252 - 5367216
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtga 267  Q
    ||||||||||||| | |||||||||||||||||||||    
T  5367252 ccgacaccgacacatataattacactgaattatgtga 5367216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 267
Target Start/End: Original strand, 20242726 - 20242762
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtga 267  Q
    ||||||||||||| | |||||||||||||||||||||    
T  20242726 ccgacaccgacacatataattacactgaattatgtga 20242762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 263
Target Start/End: Complemental strand, 20473382 - 20473350
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattat 263  Q
    |||||| ||||||||||||||||||||||||||    
T  20473382 ccgacatcgacacttgtaattacactgaattat 20473350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 332
Target Start/End: Original strand, 21374781 - 21374809
Alignment:
Q  304 gtgtccgtgtccgtatccgtgcttcatag 332  Q
    |||||||||||||||||||||||||||||    
T  21374781 gtgtccgtgtccgtatccgtgcttcatag 21374809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 314
Target Start/End: Complemental strand, 21624282 - 21624246
Alignment:
Q  278 aaattattagctgtgtcagcgtgtcagtgtccgtgtc 314  Q
    ||||||||||||||||| ||||||||||||| |||||    
T  21624282 aaattattagctgtgtcggcgtgtcagtgtctgtgtc 21624246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 309
Target Start/End: Complemental strand, 27460043 - 27460011
Alignment:
Q  277 caaattattagctgtgtcagcgtgtcagtgtcc 309  Q
    |||||||||||||||||| ||||||||||||||    
T  27460043 caaattattagctgtgtcggcgtgtcagtgtcc 27460011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 263
Target Start/End: Complemental strand, 27460097 - 27460065
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattat 263  Q
    ||||||||||| |||||||||||||||||||||    
T  27460097 ccgacaccgacccttgtaattacactgaattat 27460065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 267
Target Start/End: Complemental strand, 28596529 - 28596493
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtga 267  Q
    ||||||||||||||| |||||||||||| ||||||||    
T  28596529 ccgacaccgacacttataattacactgacttatgtga 28596493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 232
Target Start/End: Original strand, 42511327 - 42511359
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtccc 232  Q
    |||||||||||||||||||||||| ||||||||    
T  42511327 aagcacggacactcctcggattagccgtgtccc 42511359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 2e-24; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 200 - 332
Target Start/End: Complemental strand, 14674363 - 14674231
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccgaca---ccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcag 296  Q
    |||||| |||||||||||||||||| ||||| || |    |||||||||||||||||||| ||||||||||         |||||||||||||||||| |    
T  14674363 aagcacagacactcctcggattaggtgtgtctcggcctgtccgacacttgtaattacactaaattatgtgatttttt---caaattattagctgtgtcgg 14674267  T
Q  297 cgtgtcagtgtccgtgtccgtatccgtgcttcatag 332  Q
    |||||||||||||||||| |||||||||||||||||    
T  14674266 cgtgtcagtgtccgtgtctgtatccgtgcttcatag 14674231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 200 - 267
Target Start/End: Complemental strand, 10298664 - 10298593
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcc----cgacaccgacacttgtaattacactgaattatgtga 267  Q
    ||||||||||||||||||||||||||||||||    ||||||||||||||||||||||| || |||||||||    
T  10298664 aagcacggacactcctcggattaggcgtgtccgatacgacaccgacacttgtaattacattgtattatgtga 10298593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 232 - 317
Target Start/End: Complemental strand, 39698600 - 39698518
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtccgt 317  Q
    |||||| |||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||| |||||    
T  39698600 cgacactgacacttgtaattacactgaattatgtgatttttt---caaattattagctgtgtcagcgtgtcagtgtccgtatccgt 39698518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 231 - 314
Target Start/End: Original strand, 21191055 - 21191135
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtc 314  Q
    |||||||||||||||||||||||||||||||||||||         |||||||||||||||||| || ||||||||||||||||    
T  21191055 ccgacaccgacacttgtaattacactgaattatgtga---ttttttcaaattattagctgtgtcggcatgtcagtgtccgtgtc 21191135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 200 - 329
Target Start/End: Complemental strand, 8420117 - 8419985
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgt 299  Q
    ||||||||| |||||||| |||||||| |||| |||||||||||||||||||||| |||||||||| |         ||||||||||||| |||| ||||    
T  8420117 aagcacggatactcctcgaattaggcgcgtcc-gacaccgacacttgtaattacattgaattatgtta---ttttttcaaattattagctatgtcggcgt 8420022  T
Q  300 gtca-------gtgtccgtgtccgtatccgtgcttca 329  Q
    ||||       ||||||||||||||||||||||||||    
T  8420021 gtcattgtccggtgtccgtgtccgtatccgtgcttca 8419985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 235 - 332
Target Start/End: Complemental strand, 43001856 - 43001762
Alignment:
Q  235 caccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtccgtatccgtgcttcatag 332  Q
    |||| |||||||||||||||||||||||||| |         |||||||||||| |||||  | ||||||||||||||||||||||||||||||||||    
T  43001856 caccaacacttgtaattacactgaattatgtaatttttt---caaattattagcagtgtcgacatgtcagtgtccgtgtccgtatccgtgcttcatag 43001762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 243
Target Start/End: Original strand, 22423769 - 22423812
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccgacaccgacac 243  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  22423769 aagcacggacactcctcggattaggcgtgtccagacaccgacac 22423812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 231 - 267
Target Start/End: Complemental strand, 6247682 - 6247646
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtga 267  Q
    |||||||||||||||||||||||||||||||||||||    
T  6247682 ccgacaccgacacttgtaattacactgaattatgtga 6247646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 231 - 267
Target Start/End: Complemental strand, 15884048 - 15884012
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtga 267  Q
    |||||||||||||||||||||||||||||||||||||    
T  15884048 ccgacaccgacacttgtaattacactgaattatgtga 15884012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 314
Target Start/End: Complemental strand, 15382539 - 15382457
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtc 314  Q
    |||||||||||||||||||||| |||||||||| |||         |||||||||||||||||| |||||||| ||||||||||    
T  15382539 ccgacaccgacacttgtaattatactgaattatatgatttttttt-caaattattagctgtgtcggcgtgtcattgtccgtgtc 15382457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 314
Target Start/End: Complemental strand, 21522809 - 21522730
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtc 314  Q
    ||||||||||| |||||||||||||||||||||| |          ||||||||||||||||| |||||||||||||||||||    
T  21522809 cgacaccgacaattgtaattacactgaattatgttatttttta---aaattattagctgtgtcggcgtgtcagtgtccgtgtc 21522730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 314
Target Start/End: Complemental strand, 21533375 - 21533296
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtc 314  Q
    ||||||||||| |||||||||||||||||||||| |          ||||||||||||||||| |||||||||||||||||||    
T  21533375 cgacaccgacaattgtaattacactgaattatgttatttttta---aaattattagctgtgtcggcgtgtcagtgtccgtgtc 21533296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 267
Target Start/End: Original strand, 21351906 - 21351940
Alignment:
Q  233 gacaccgacacttgtaattacactgaattatgtga 267  Q
    |||||||||||||||||||||||||||||||||||    
T  21351906 gacaccgacacttgtaattacactgaattatgtga 21351940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 234
Target Start/End: Complemental strand, 35017157 - 35017123
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccga 234  Q
    |||||||||||||||||||||||||||||||||||    
T  35017157 aagcacggacactcctcggattaggcgtgtcccga 35017123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 14873636 - 14873603
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccg 233  Q
    ||||||||||||||||||||||||||||||||||    
T  14873636 aagcacggacactcctcggattaggcgtgtcccg 14873603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 17123161 - 17123128
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccg 233  Q
    ||||||||||||||||||||||||||||||||||    
T  17123161 aagcacggacactcctcggattaggcgtgtcccg 17123128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 313
Target Start/End: Complemental strand, 19579760 - 19579682
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgt 313  Q
    |||||||||||||||||||| |||| ||||||||||         |||||||||||||||||| |||| |||||||||||||    
T  19579760 cgacaccgacacttgtaattgcactaaattatgtgattttct---caaattattagctgtgtcggcgtatcagtgtccgtgt 19579682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 21191001 - 21191034
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccg 233  Q
    ||||||||||||||||||||||||||||||||||    
T  21191001 aagcacggacactcctcggattaggcgtgtcccg 21191034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 265
Target Start/End: Complemental strand, 21542089 - 21542056
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgt 265  Q
    ||||||||||||||||||||||||||||||||||    
T  21542089 cgacaccgacacttgtaattacactgaattatgt 21542056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 277 - 314
Target Start/End: Complemental strand, 22013431 - 22013394
Alignment:
Q  277 caaattattagctgtgtcagcgtgtcagtgtccgtgtc 314  Q
    |||||||||||||||||| |||||||||||||||||||    
T  22013431 caaattattagctgtgtcggcgtgtcagtgtccgtgtc 22013394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 232
Target Start/End: Complemental strand, 4105373 - 4105341
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtccc 232  Q
    |||||||||||||||||||||||||||||||||    
T  4105373 aagcacggacactcctcggattaggcgtgtccc 4105341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 6035500 - 6035444
Alignment:
Q  277 caaattattagctgtgtcagcgtgtcagtgtccgtgtccgtatccgtgcttcatagg 333  Q
    |||||||||||| ||||| |||||||||||||  ||||  |||||||||||||||||    
T  6035500 caaattattagcggtgtcggcgtgtcagtgtctttgtctatatccgtgcttcatagg 6035444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 232
Target Start/End: Original strand, 21576690 - 21576722
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtccc 232  Q
    |||||||||||||||||||||||||||||||||    
T  21576690 aagcacggacactcctcggattaggcgtgtccc 21576722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 267
Target Start/End: Original strand, 21576744 - 21576780
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtga 267  Q
    |||||| ||||||||||||||||||||||||||||||    
T  21576744 ccgacatcgacacttgtaattacactgaattatgtga 21576780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 267
Target Start/End: Complemental strand, 33178085 - 33178049
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtga 267  Q
    |||||||||||||||||||||||||| ||||||||||    
T  33178085 ccgacaccgacacttgtaattacactaaattatgtga 33178049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 232
Target Start/End: Original strand, 39268543 - 39268575
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtccc 232  Q
    |||||||||||||||||||||||||||||||||    
T  39268543 aagcacggacactcctcggattaggcgtgtccc 39268575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 236 - 267
Target Start/End: Original strand, 7218271 - 7218302
Alignment:
Q  236 accgacacttgtaattacactgaattatgtga 267  Q
    ||||||||||||||||||||||||||||||||    
T  7218271 accgacacttgtaattacactgaattatgtga 7218302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 267
Target Start/End: Original strand, 13287399 - 13287434
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtga 267  Q
    ||||||||||||||||| ||||||||||||||||||    
T  13287399 cgacaccgacacttgtagttacactgaattatgtga 13287434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 200 - 231
Target Start/End: Complemental strand, 43001919 - 43001888
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcc 231  Q
    ||||||||||||||||||||||||||||||||    
T  43001919 aagcacggacactcctcggattaggcgtgtcc 43001888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 329
Target Start/End: Complemental strand, 3966562 - 3966467
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtcc-gtgtccgtatccgtgcttca 329  Q
    |||||||||||| | ||||||||||||||| |||||         |||||||||||| ||||| || ||||||||||| |||||||| |||||||||||    
T  3966562 cgacaccgacacatataattacactgaattgtgtgattttct---caaattattagcggtgtcggcatgtcagtgtccagtgtccgtgtccgtgcttca 3966467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 233
Target Start/End: Complemental strand, 17088402 - 17088372
Alignment:
Q  203 cacggacactcctcggattaggcgtgtcccg 233  Q
    |||||||||||||||||||||||||||||||    
T  17088402 cacggacactcctcggattaggcgtgtcccg 17088372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 233
Target Start/End: Original strand, 21194067 - 21194101
Alignment:
Q  199 aaagcacggacactcctcggattaggcgtgtcccg 233  Q
    |||||||||||||||||||||||||||||| ||||    
T  21194067 aaagcacggacactcctcggattaggcgtgccccg 21194101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 265
Target Start/End: Original strand, 24906300 - 24906334
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgt 265  Q
    |||| ||||||||||||||||||||||||||||||    
T  24906300 ccgataccgacacttgtaattacactgaattatgt 24906334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 230
Target Start/End: Complemental strand, 39698666 - 39698636
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtc 230  Q
    |||||||||||||||||||||||||||||||    
T  39698666 aagcacggacactcctcggattaggcgtgtc 39698636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 267
Target Start/End: Complemental strand, 42893418 - 42893384
Alignment:
Q  233 gacaccgacacttgtaattacactgaattatgtga 267  Q
    ||||||||||||||||||||||||| |||||||||    
T  42893418 gacaccgacacttgtaattacactggattatgtga 42893384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 324
Target Start/End: Complemental strand, 43564941 - 43564853
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtccgtatccgtg 324  Q
    ||||||||||||||| |||||||||| ||||||||||         ||||||||  | |||||| |||||||||||| ||||||||||||||||    
T  43564941 ccgacaccgacacttataattacactaaattatgtga---tttttccaaattat--gatgtgtcggcgtgtcagtgttcgtgtccgtatccgtg 43564853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 333
Target Start/End: Complemental strand, 15382449 - 15382420
Alignment:
Q  304 gtgtccgtgtccgtatccgtgcttcatagg 333  Q
    ||||||||||||||||||||||||||||||    
T  15382449 gtgtccgtgtccgtatccgtgcttcatagg 15382420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 314
Target Start/End: Original strand, 19552585 - 19552622
Alignment:
Q  277 caaattattagctgtgtcagcgtgtcagtgtccgtgtc 314  Q
    |||||||||| ||||||| |||||||||||||||||||    
T  19552585 caaattattaactgtgtcggcgtgtcagtgtccgtgtc 19552622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 19820333 - 19820366
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccg 233  Q
    ||||||||||||||||| ||||||||||||||||    
T  19820333 aagcacggacactcctctgattaggcgtgtcccg 19820366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 314
Target Start/End: Original strand, 36642804 - 36642841
Alignment:
Q  277 caaattattagctgtgtcagcgtgtcagtgtccgtgtc 314  Q
    |||||||||| ||||||| |||||||||||||||||||    
T  36642804 caaattattaactgtgtcggcgtgtcagtgtccgtgtc 36642841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 265
Target Start/End: Complemental strand, 41633794 - 41633761
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgt 265  Q
    ||||||||||| ||||||||||||||||||||||    
T  41633794 cgacaccgacatttgtaattacactgaattatgt 41633761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 43564995 - 43564962
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccg 233  Q
    ||||||||||||| ||||||||||||||||||||    
T  43564995 aagcacggacacttctcggattaggcgtgtcccg 43564962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 232
Target Start/End: Complemental strand, 3966628 - 3966596
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtccc 232  Q
    |||||||||||||||||||||||| ||||||||    
T  3966628 aagcacggacactcctcggattagacgtgtccc 3966596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 314
Target Start/End: Complemental strand, 6770559 - 6770523
Alignment:
Q  278 aaattattagctgtgtcagcgtgtcagtgtccgtgtc 314  Q
    |||||||||| |||||||| |||||||||||||||||    
T  6770559 aaattattagttgtgtcagtgtgtcagtgtccgtgtc 6770523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 314
Target Start/End: Original strand, 15410491 - 15410527
Alignment:
Q  278 aaattattagctgtgtcagcgtgtcagtgtccgtgtc 314  Q
    ||||||||||| ||||| |||||||||||||||||||    
T  15410491 aaattattagcggtgtcggcgtgtcagtgtccgtgtc 15410527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 232
Target Start/End: Original strand, 23015929 - 23015961
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtccc 232  Q
    |||| ||||||||||||||||||||||||||||    
T  23015929 aagctcggacactcctcggattaggcgtgtccc 23015961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 267
Target Start/End: Original strand, 28588673 - 28588709
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtga 267  Q
    ||||||||||||| | |||||||||||||||||||||    
T  28588673 ccgacaccgacacctataattacactgaattatgtga 28588709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 330
Target Start/End: Complemental strand, 41995445 - 41995417
Alignment:
Q  302 cagtgtccgtgtccgtatccgtgcttcat 330  Q
    |||||||||||||||||||||||||||||    
T  41995445 cagtgtccgtgtccgtatccgtgcttcat 41995417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 1e-23; HSPs: 69)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 231 - 331
Target Start/End: Original strand, 46348382 - 46348479
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtccgtatccgtgcttcat 330  Q
    |||||||||||||||||||||||||| |||||| |||         |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  46348382 ccgacaccgacacttgtaattacactaaattatatgatttttt---caaattattagctgtgtcggcgtgtcagtgtccgtgtccgtatccgtgcttcat 46348478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 277 - 327
Target Start/End: Original strand, 18556498 - 18556548
Alignment:
Q  277 caaattattagctgtgtcagcgtgtcagtgtccgtgtccgtatccgtgctt 327  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  18556498 caaattattagctgtgtcggcgtgtcagtgtccgtgtccgtatccgtgctt 18556548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 200 - 333
Target Start/End: Original strand, 48450555 - 48450690
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgt 299  Q
    |||||||||||||||||||||||| ||||||| |   |||||||||||||||||||| |||||||| |         |||||||||||||||||  ||||    
T  48450555 aagcacggacactcctcggattagacgtgtcctgtgtccgacacttgtaattacactaaattatgttatttttt---caaattattagctgtgttggcgt 48450651  T
Q  300 gtcagtgtccgtg-----tccgtatccgtgcttcatagg 333  Q
    |||||||||||||     ||||||||| |||||||||||    
T  48450652 gtcagtgtccgtgtcgtgtccgtatccatgcttcatagg 48450690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 232 - 314
Target Start/End: Original strand, 1486709 - 1486788
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtc 314  Q
    |||||||||||||| |||||||||||||||||||||         ||||||||||||||||||||||||||||| ||||||||    
T  1486709 cgacaccgacacttataattacactgaattatgtgatttttt---caaattattagctgtgtcagcgtgtcagtatccgtgtc 1486788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 231 - 313
Target Start/End: Original strand, 42359448 - 42359527
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgt 313  Q
    ||||||||||||||||||||||||||||||| |||||         ||||||||||| |||||||||||||||||||||||||    
T  42359448 ccgacaccgacacttgtaattacactgaattttgtga---ttttttcaaattattagatgtgtcagcgtgtcagtgtccgtgt 42359527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 215 - 332
Target Start/End: Original strand, 31672879 - 31672987
Alignment:
Q  215 tcggattaggcgtgtcccgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtc 314  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||| ||||         |||||||||||||||||| | |||||||||||     |    
T  31672879 tcggattaggcgtgtcc-gacaccgagacttgtaattacactgaattaagtga---ttttttcaaattattagctgtgtcggtgtgtcagtgtc-----c 31672969  T
Q  315 cgtatccgtgcttcatag 332  Q
    ||||||||||||||||||    
T  31672970 cgtatccgtgcttcatag 31672987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 264
Target Start/End: Original strand, 24334669 - 24334737
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtc----ccgacaccgacacttgtaattacactgaattatg 264  Q
    ||||||||||||| || |||||||||||| |    ||||||||||||||||||||||||||||||||||    
T  24334669 aagcacggacactacttggattaggcgtgacgtgtccgacaccgacacttgtaattacactgaattatg 24334737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 232 - 332
Target Start/End: Original strand, 24577186 - 24577289
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtg------tccgtgtccgtatccgtgc 325  Q
    ||||||||||||||||||||||||||||||||||||         ||||||||||| |||||||||||||| |||      || ||||||||||||||||    
T  24577186 cgacaccgacacttgtaattacactgaattatgtga---ttttttcaaattattagttgtgtcagcgtgtccgtgtcgtgttcagtgtccgtatccgtgc 24577282  T
Q  326 ttcatag 332  Q
    |||||||    
T  24577283 ttcatag 24577289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 231 - 332
Target Start/End: Complemental strand, 51410085 - 51409981
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtc-----agtgtccgtgtccgtatccgtgc 325  Q
    |||||||||||||||||||||||||||||||||||||         ||||||||||| |||||| || ||||      ||||||||||||||||||||||    
T  51410085 ccgacaccgacacttgtaattacactgaattatgtga--tttttttcaaattattagatgtgtcggcatgtccgttttgtgtccgtgtccgtatccgtgc 51409988  T
Q  326 ttcatag 332  Q
    |||||||    
T  51409987 ttcatag 51409981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 312
Target Start/End: Original strand, 22515886 - 22515964
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtg 312  Q
    |||||||||||||||||||||||||| ||||||||||         |||||||||||||||||| ||||||| |||||||||    
T  22515886 ccgacaccgacacttgtaattacactaaattatgtga---ttttttcaaattattagctgtgtctgcgtgtccgtgtccgtg 22515964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 333
Target Start/End: Original strand, 35702547 - 35702692
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtc---------ccgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctg 290  Q
    |||||||||||||||||||||||||||||||         ||||||| |||||||||||||||||| |||||| |||         ||||||||||||||    
T  35702547 aagcacggacactcctcggattaggcgtgtcccatcgtgtccgacactgacacttgtaattacacttaattatttga---agttttcaaattattagctg 35702643  T
Q  291 tgtcagcgtgtcagtgt------ccgtgtccgtatccgtgcttcatagg 333  Q
    |||| || |||||||||      | ||||||||||||||||||||||||    
T  35702644 tgtcggcatgtcagtgtcgtgtccggtgtccgtatccgtgcttcatagg 35702692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 316
Target Start/End: Original strand, 38078660 - 38078742
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtccg 316  Q
    |||||||||||||||||||||||| ||||||||||||         ||||||||||||||||||  ||||||||||| ||||||||    
T  38078660 ccgacaccgacacttgtaattacattgaattatgtga---ttttttcaaattattagctgtgtcgacgtgtcagtgttcgtgtccg 38078742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 232 - 331
Target Start/End: Complemental strand, 6427523 - 6427425
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtccgtatccgtgcttcata 331  Q
    |||||| |||||||||| ||||| ||||||||||||         ||||||||||| |||||| || ||||||||| ||||||||||||| |||||||||    
T  6427523 cgacactgacacttgtagttacattgaattatgtgatttttttttcaaattattagttgtgtcggcatgtcagtgt-cgtgtccgtatccatgcttcata 6427425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 231 - 267
Target Start/End: Complemental strand, 18337389 - 18337353
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtga 267  Q
    |||||||||||||||||||||||||||||||||||||    
T  18337389 ccgacaccgacacttgtaattacactgaattatgtga 18337353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 200 - 265
Target Start/End: Original strand, 41877437 - 41877503
Alignment:
Q  200 aagcacggacactcctcggattaggc--gtgtcccgacaccgacacttgtaattacactgaattatgt 265  Q
    |||||||| |||||||||| ||||||  |||||| |||||||||||||||||||||||| ||||||||    
T  41877437 aagcacggccactcctcgggttaggcacgtgtcc-gacaccgacacttgtaattacactaaattatgt 41877503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 333
Target Start/End: Original strand, 14359529 - 14359624
Alignment:
Q  239 gacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtc-----cgtgtccgtatccgtgcttcatagg 333  Q
    |||||||||||||||||| ||||||||||         |||||||||||||||||| ||||||| |||||     |||||||||||||||||||||||||    
T  14359529 gacacttgtaattacactaaattatgtgattttt----caaattattagctgtgtcggcgtgtccgtgtctgtgtcgtgtccgtatccgtgcttcatagg 14359624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 267
Target Start/End: Complemental strand, 47989556 - 47989521
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtga 267  Q
    ||||||||||||||||||||||||||||||||||||    
T  47989556 cgacaccgacacttgtaattacactgaattatgtga 47989521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 314
Target Start/End: Original strand, 398738 - 398844
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgt 299  Q
    ||||||||||||| ||  ||||||||||||||||     ||||| | |||||||||||||||||||||         |||||||||||| ||||| ||||    
T  398738 aagcacggacacttcttagattaggcgtgtcccg-----gacacctataattacactgaattatgtgatttttt---caaattattagcggtgtcggcgt 398829  T
Q  300 gtcagtgtccgtgtc 314  Q
    |||||||||||||||    
T  398830 gtcagtgtccgtgtc 398844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 267
Target Start/End: Complemental strand, 1815315 - 1815281
Alignment:
Q  233 gacaccgacacttgtaattacactgaattatgtga 267  Q
    |||||||||||||||||||||||||||||||||||    
T  1815315 gacaccgacacttgtaattacactgaattatgtga 1815281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 314
Target Start/End: Complemental strand, 5944342 - 5944261
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtc 314  Q
    |||||||||||||| |||||||||||||||||||||         |||||||||||||||| | ||||||||||||| |||||    
T  5944342 cgacaccgacacttataattacactgaattatgtga-ttttttttcaaattattagctgtggcggcgtgtcagtgtctgtgtc 5944261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 265
Target Start/End: Original strand, 19058855 - 19058889
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgt 265  Q
    |||||||||||||||||||||||||||||||||||    
T  19058855 ccgacaccgacacttgtaattacactgaattatgt 19058889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 267
Target Start/End: Original strand, 40258934 - 40258968
Alignment:
Q  233 gacaccgacacttgtaattacactgaattatgtga 267  Q
    |||||||||||||||||||||||||||||||||||    
T  40258934 gacaccgacacttgtaattacactgaattatgtga 40258968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 234
Target Start/End: Complemental strand, 47989622 - 47989588
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccga 234  Q
    |||||||||||||||||||||||||||||||||||    
T  47989622 aagcacggacactcctcggattaggcgtgtcccga 47989588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 265
Target Start/End: Original strand, 6612171 - 6612204
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgt 265  Q
    ||||||||||||||||||||||||||||||||||    
T  6612171 cgacaccgacacttgtaattacactgaattatgt 6612204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 308
Target Start/End: Original strand, 22881615 - 22881689
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtc 308  Q
    |||||||||||||||||||||||||| ||||||||||         ||||||||||| |||||| |||||||||||||    
T  22881615 ccgacaccgacacttgtaattacactaaattatgtga---ttttttcaaattattagttgtgtcggcgtgtcagtgtc 22881689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 233 - 333
Target Start/End: Original strand, 28273089 - 28273191
Alignment:
Q  233 gacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtc-----cgtgtccgtatccgtgctt 327  Q
    ||||||||||||||||||||||||||||||| |||         ||||| ||||| ||||||||| ||||||||||     | |||||||||||||||||    
T  28273089 gacaccgacacttgtaattacactgaattatatga---ttttttcaaatgattagttgtgtcagcatgtcagtgtccttgtcatgtccgtatccgtgctt 28273185  T
Q  328 catagg 333  Q
    ||||||    
T  28273186 catagg 28273191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 42359394 - 42359427
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccg 233  Q
    ||||||||||||||||||||||||||||||||||    
T  42359394 aagcacggacactcctcggattaggcgtgtcccg 42359427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 304
Target Start/End: Complemental strand, 113358 - 113289
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcag 304  Q
    ||||||| ||||||||||||||||||||||||||||         |||||||||||||||||| |||||||||    
T  113358 cgacacctacacttgtaattacactgaattatgtga---ttttttcaaattattagctgtgtcggcgtgtcag 113289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 232
Target Start/End: Complemental strand, 37598945 - 37598913
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtccc 232  Q
    |||||||||||||||||||||||||||||||||    
T  37598945 aagcacggacactcctcggattaggcgtgtccc 37598913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 267
Target Start/End: Original strand, 1704992 - 1705027
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtga 267  Q
    |||||||||||||||||||||| |||||||||||||    
T  1704992 cgacaccgacacttgtaattaccctgaattatgtga 1705027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 267
Target Start/End: Complemental strand, 6332729 - 6332694
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtga 267  Q
    ||||||||| ||||||||||||||||||||||||||    
T  6332729 cgacaccgatacttgtaattacactgaattatgtga 6332694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 277 - 332
Target Start/End: Complemental strand, 6427367 - 6427313
Alignment:
Q  277 caaattattagctgtgtcagcgtgtcagtgtccgtgtccgtatccgtgcttcatag 332  Q
    |||||||||||| ||||  ||||||||||||||||| |||| ||||||||||||||    
T  6427367 caaattattagcggtgttggcgtgtcagtgtccgtg-ccgtgtccgtgcttcatag 6427313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 200 - 231
Target Start/End: Original strand, 16297226 - 16297257
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcc 231  Q
    ||||||||||||||||||||||||||||||||    
T  16297226 aagcacggacactcctcggattaggcgtgtcc 16297257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 234 - 265
Target Start/End: Complemental strand, 21378635 - 21378604
Alignment:
Q  234 acaccgacacttgtaattacactgaattatgt 265  Q
    ||||||||||||||||||||||||||||||||    
T  21378635 acaccgacacttgtaattacactgaattatgt 21378604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 200 - 231
Target Start/End: Complemental strand, 22947844 - 22947813
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcc 231  Q
    ||||||||||||||||||||||||||||||||    
T  22947844 aagcacggacactcctcggattaggcgtgtcc 22947813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 200 - 267
Target Start/End: Complemental strand, 30359479 - 30359412
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccgacaccgacacttgtaattacactgaattatgtga 267  Q
    ||||||||||||||||| |||| |||||||||||    ||||||||| | ||||||| ||||||||||    
T  30359479 aagcacggacactcctcagatttggcgtgtcccgttgtcgacacttgcagttacactaaattatgtga 30359412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 267
Target Start/End: Original strand, 31694710 - 31694745
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtga 267  Q
    ||||||||||||||||||||| ||||||||||||||    
T  31694710 cgacaccgacacttgtaattatactgaattatgtga 31694745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 266
Target Start/End: Complemental strand, 2218298 - 2218264
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtg 266  Q
    ||||||||||||||||||||||||| |||||||||    
T  2218298 cgacaccgacacttgtaattacactaaattatgtg 2218264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 233
Target Start/End: Original strand, 5898210 - 5898244
Alignment:
Q  199 aaagcacggacactcctcggattaggcgtgtcccg 233  Q
    ||||||||||||||||||||||||| |||||||||    
T  5898210 aaagcacggacactcctcggattagacgtgtcccg 5898244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 267
Target Start/End: Original strand, 17705551 - 17705621
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtc----ccgacaccgacacttgtaattacactgaattatgtga 267  Q
    ||||||||||||||||| ||||| |||||||    |||||| |||||| | |||||||||||||||||||||    
T  17705551 aagcacggacactcctcagattaagcgtgtcgcgtccgaca-cgacacatataattacactgaattatgtga 17705621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 230
Target Start/End: Original strand, 21365997 - 21366027
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtc 230  Q
    |||||||||||||||||||||||||||||||    
T  21365997 aagcacggacactcctcggattaggcgtgtc 21366027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 230
Target Start/End: Original strand, 22515832 - 22515862
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtc 230  Q
    |||||||||||||||||||||||||||||||    
T  22515832 aagcacggacactcctcggattaggcgtgtc 22515862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 267
Target Start/End: Complemental strand, 31015097 - 31015067
Alignment:
Q  237 ccgacacttgtaattacactgaattatgtga 267  Q
    |||||||||||||||||||||||||||||||    
T  31015097 ccgacacttgtaattacactgaattatgtga 31015067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 332
Target Start/End: Complemental strand, 37598891 - 37598793
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtcc-gtgtccgtatccgtgcttca 329  Q
    ||||||||||||||| ||||||||||||||| |||||         ||||||||||| |||||| |||||||||||||| ||||| || ||||||| |||    
T  37598891 ccgacaccgacacttataattacactgaatt-tgtgatttttt---caaattattagttgtgtcggcgtgtcagtgtccggtgtctgtgtccgtgcgtca 37598796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 1486649 - 1486682
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccg 233  Q
    |||||| |||||||||||||||||||||||||||    
T  1486649 aagcacagacactcctcggattaggcgtgtcccg 1486682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 265
Target Start/End: Original strand, 5376500 - 5376533
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgt 265  Q
    |||||||||||||| |||||||||||||||||||    
T  5376500 cgacaccgacacttttaattacactgaattatgt 5376533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 314
Target Start/End: Original strand, 5927382 - 5927419
Alignment:
Q  277 caaattattagctgtgtcagcgtgtcagtgtccgtgtc 314  Q
    |||||||||||| |||| ||||||||||||||||||||    
T  5927382 caaattattagcagtgttagcgtgtcagtgtccgtgtc 5927419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 9828169 - 9828136
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccg 233  Q
    |||||||||||||||||||||||| |||||||||    
T  9828169 aagcacggacactcctcggattagacgtgtcccg 9828136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 16812670 - 16812637
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccg 233  Q
    ||||||||||||||||| ||||||||||||||||    
T  16812670 aagcacggacactcctcagattaggcgtgtcccg 16812637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 26830701 - 26830668
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccg 233  Q
    ||||||||||||||||| ||||||||||||||||    
T  26830701 aagcacggacactcctctgattaggcgtgtcccg 26830668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 27965945 - 27965978
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccg 233  Q
    ||||| ||||||||||||||||||||||||||||    
T  27965945 aagcatggacactcctcggattaggcgtgtcccg 27965978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 265
Target Start/End: Original strand, 30173762 - 30173795
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgt 265  Q
    ||||||||||||||||||||||||||| ||||||    
T  30173762 cgacaccgacacttgtaattacactgagttatgt 30173795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 34741960 - 34741927
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccg 233  Q
    |||||||||||||| |||||||||||||||||||    
T  34741960 aagcacggacactcttcggattaggcgtgtcccg 34741927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 314
Target Start/End: Complemental strand, 40917768 - 40917731
Alignment:
Q  277 caaattattagctgtgtcagcgtgtcagtgtccgtgtc 314  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  40917768 caaattattagctgtgtcggcgtgtcagtatccgtgtc 40917731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 40917874 - 40917841
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccg 233  Q
    ||||||||||| ||||||||||||||||||||||    
T  40917874 aagcacggacagtcctcggattaggcgtgtcccg 40917841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 314
Target Start/End: Original strand, 48040504 - 48040541
Alignment:
Q  277 caaattattagctgtgtcagcgtgtcagtgtccgtgtc 314  Q
    |||||||||| ||||||| |||||||||||||||||||    
T  48040504 caaattattatctgtgtcggcgtgtcagtgtccgtgtc 48040541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 333
Target Start/End: Original strand, 48548049 - 48548078
Alignment:
Q  304 gtgtccgtgtccgtatccgtgcttcatagg 333  Q
    ||||||||||||||||||||||||||||||    
T  48548049 gtgtccgtgtccgtatccgtgcttcatagg 48548078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 313
Target Start/End: Original strand, 2896163 - 2896199
Alignment:
Q  277 caaattattagctgtgtcagcgtgtcagtgtccgtgt 313  Q
    |||||||||||| ||||| ||||||||||||||||||    
T  2896163 caaattattagcggtgtcggcgtgtcagtgtccgtgt 2896199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 332
Target Start/End: Original strand, 10577822 - 10577850
Alignment:
Q  304 gtgtccgtgtccgtatccgtgcttcatag 332  Q
    |||||||||||||||||||||||||||||    
T  10577822 gtgtccgtgtccgtatccgtgcttcatag 10577850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 232
Target Start/End: Complemental strand, 15765872 - 15765840
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtccc 232  Q
    |||||||||||||| ||||||||||||||||||    
T  15765872 aagcacggacactcttcggattaggcgtgtccc 15765840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 265
Target Start/End: Original strand, 18190109 - 18190141
Alignment:
Q  233 gacaccgacacttgtaattacactgaattatgt 265  Q
    |||| ||||||||||||||||||||||||||||    
T  18190109 gacatcgacacttgtaattacactgaattatgt 18190141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 232
Target Start/End: Original strand, 18556390 - 18556422
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtccc 232  Q
    ||||||||||||| |||||||||||||||||||    
T  18556390 aagcacggacacttctcggattaggcgtgtccc 18556422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 267
Target Start/End: Complemental strand, 21621015 - 21620979
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtga 267  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  21621015 ccgacaccgacgcttgtaaatacactgaattatgtga 21620979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 332
Target Start/End: Complemental strand, 25934600 - 25934572
Alignment:
Q  304 gtgtccgtgtccgtatccgtgcttcatag 332  Q
    |||||||||||||||||||||||||||||    
T  25934600 gtgtccgtgtccgtatccgtgcttcatag 25934572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 317
Target Start/End: Original strand, 29144400 - 29144440
Alignment:
Q  277 caaattattagctgtgtcagcgtgtcagtgtccgtgtccgt 317  Q
    |||||||||||||||||| |||| |||||||| ||||||||    
T  29144400 caaattattagctgtgtcggcgtatcagtgtcagtgtccgt 29144440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 267
Target Start/End: Complemental strand, 30749900 - 30749864
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtga 267  Q
    ||||||||||||| | |||||||||||||||||||||    
T  30749900 ccgacaccgacacatataattacactgaattatgtga 30749864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 267
Target Start/End: Complemental strand, 30771351 - 30771315
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtga 267  Q
    ||||||||||||| | |||||||||||||||||||||    
T  30771351 ccgacaccgacacatataattacactgaattatgtga 30771315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 232
Target Start/End: Complemental strand, 36878580 - 36878548
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtccc 232  Q
    |||||||||||||||| ||||||||||||||||    
T  36878580 aagcacggacactcctgggattaggcgtgtccc 36878548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 332
Target Start/End: Original strand, 38078743 - 38078771
Alignment:
Q  304 gtgtccgtgtccgtatccgtgcttcatag 332  Q
    |||||||||||||||||||||||||||||    
T  38078743 gtgtccgtgtccgtatccgtgcttcatag 38078771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 200 - 314
Target Start/End: Complemental strand, 46771 - 46662
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgt 299  Q
    |||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||         |||||||||| ||||||| ||||    
T  46771 aagcacggacactcctcggattaggcgtgtc--gacaccgacatttgtaattacactgaattatgtga---ttttttcaaattattaactgtgtcggcgt 46677  T
Q  300 gtcagtgtccgtgtc 314  Q
    |||| ||||||||||    
T  46676 gtcattgtccgtgtc 46662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 4e-23; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 231 - 334
Target Start/End: Original strand, 36450753 - 36450853
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtccgtatccgtgcttcat 330  Q
    |||||||| |||||||||||||||||||||| |||||         ||||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  36450753 ccgacacctacacttgtaattacactgaattctgtgatttttt---caaattattagttgtgtcggcgtgtcagtgtccgtgtccgtatccgtgcttcat 36450849  T
Q  331 aggg 334  Q
    ||||    
T  36450850 aggg 36450853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 232 - 314
Target Start/End: Complemental strand, 22652035 - 22651956
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtc 314  Q
    ||||||||||||||||||||| | ||||||||||||         |||||||||||||||||| |||||||||||||||||||    
T  22652035 cgacaccgacacttgtaattatattgaattatgtgatttttt---caaattattagctgtgtcggcgtgtcagtgtccgtgtc 22651956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 200 - 267
Target Start/End: Complemental strand, 31514968 - 31514897
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtc----ccgacaccgacacttgtaattacactgaattatgtga 267  Q
    |||||||||||||||||||||||||||||||    || ||||| ||||||||| |||| |||||||||||||    
T  31514968 aagcacggacactcctcggattaggcgtgtcgtgtccaacaccaacacttgtagttacgctgaattatgtga 31514897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 231 - 267
Target Start/End: Complemental strand, 4948712 - 4948676
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtga 267  Q
    |||||||||||||||||||||||||||||||||||||    
T  4948712 ccgacaccgacacttgtaattacactgaattatgtga 4948676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 234 - 314
Target Start/End: Original strand, 29510306 - 29510383
Alignment:
Q  234 acaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtc 314  Q
    ||||||||||||||||||| |||||||| |||||         |||||||||||||||||| |||||||||||||||||||    
T  29510306 acaccgacacttgtaattatactgaattttgtgatttttt---caaattattagctgtgtcggcgtgtcagtgtccgtgtc 29510383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 314
Target Start/End: Complemental strand, 20873129 - 20873049
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtc 314  Q
    |||||||||||||||||||||||||| ||||||||||         |||||||||| || |||| |||||||||||||||||||    
T  20873129 ccgacaccgacacttgtaattacactaaattatgtga---ttttttcaaattattatctatgtcggcgtgtcagtgtccgtgtc 20873049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 267
Target Start/End: Complemental strand, 25566900 - 25566865
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtga 267  Q
    ||||||||||||||||||||||||||||||||||||    
T  25566900 cgacaccgacacttgtaattacactgaattatgtga 25566865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 200 - 267
Target Start/End: Original strand, 30077356 - 30077422
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccgacaccgacacttgtaattacactgaattatgtga 267  Q
    |||||| |||||| |||||||  ||||| ||| ||||| |||||||||||||||||||||||||||||    
T  30077356 aagcacagacactgctcggatcgggcgtatcc-gacacggacacttgtaattacactgaattatgtga 30077422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 277 - 332
Target Start/End: Original strand, 31109560 - 31109615
Alignment:
Q  277 caaattattagctgtgtcagcgtgtcagtgtccgtgtccgtatccgtgcttcatag 332  Q
    |||||||||| | ||||| |||||||||||||||||||| |||| |||||||||||    
T  31109560 caaattattaacggtgtcggcgtgtcagtgtccgtgtccatatcagtgcttcatag 31109615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 314
Target Start/End: Complemental strand, 24669492 - 24669413
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtc 314  Q
    |||||||||||||||||||||||||||||||||| |         |||||||||| | ||||||||||||||||||| |||||    
T  24669492 cgacaccgacacttgtaattacactgaattatgtaa---tttcctcaaattattaacggtgtcagcgtgtcagtgtctgtgtc 24669413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 267
Target Start/End: Complemental strand, 40332256 - 40332215
Alignment:
Q  225 cgtgtcccgacaccgacacttgtaattacactgaattatgtga 267  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  40332256 cgtgtccc-acaccgacacttgtaattacactgaattatgtga 40332215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 278 - 331
Target Start/End: Complemental strand, 22204655 - 22204603
Alignment:
Q  278 aaattattagctgtgtcagcgtgtcagtgtccgtgtccgtatccgtgcttcata 331  Q
    |||||||||| |||||| |||||||||||||||| ||||||||| |||||||||    
T  22204655 aaattattagttgtgtcggcgtgtcagtgtccgtatccgtatcc-tgcttcata 22204603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 332
Target Start/End: Complemental strand, 22596054 - 22595950
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgt------ccgtgtccgtatccgtg 324  Q
    |||||||| |||||||||||||||||||||||||| |          ||||||||||||||||| ||||||||||||      | |||||||||||||||    
T  22596054 ccgacaccaacacttgtaattacactgaattatgttattttttt---aaattattagctgtgtcggcgtgtcagtgttgtgtccggtgtccgtatccgtg 22595958  T
Q  325 cttcatag 332  Q
    ||||||||    
T  22595957 cttcatag 22595950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 202 - 264
Target Start/End: Original strand, 30271224 - 30271287
Alignment:
Q  202 gcacggacactcctcggattaggc--gtgtcccgacaccgacacttgtaattacactgaattatg 264  Q
    ||||||||||||||||  ||||||  |||||| ||||||||||||||||||||||||| ||||||    
T  30271224 gcacggacactcctcgagttaggcacgtgtcc-gacaccgacacttgtaattacactgcattatg 30271287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 232
Target Start/End: Original strand, 31109462 - 31109495
Alignment:
Q  199 aaagcacggacactcctcggattaggcgtgtccc 232  Q
    ||||||||||||||||||||||||||||||||||    
T  31109462 aaagcacggacactcctcggattaggcgtgtccc 31109495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 267
Target Start/End: Complemental strand, 24613580 - 24613544
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtga 267  Q
    |||||||||||||||||||||||||| ||||||||||    
T  24613580 ccgacaccgacacttgtaattacacttaattatgtga 24613544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 267
Target Start/End: Original strand, 2572056 - 2572091
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtga 267  Q
    ||||||||||||||||||||||||| ||||||||||    
T  2572056 cgacaccgacacttgtaattacactaaattatgtga 2572091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 267
Target Start/End: Complemental strand, 8343031 - 8342996
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtga 267  Q
    ||||||||||||||||||||||||| ||||||||||    
T  8343031 cgacaccgacacttgtaattacactaaattatgtga 8342996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 200 - 267
Target Start/End: Complemental strand, 34897175 - 34897109
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccgacaccgacacttgtaattacactgaattatgtga 267  Q
    |||||||||||||||||| ||||   |||||| |||| |||||| | |||||||||||||||||||||    
T  34897175 aagcacggacactcctcgaattacatgtgtcc-gacatcgacacatataattacactgaattatgtga 34897109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 332
Target Start/End: Original strand, 5137484 - 5137518
Alignment:
Q  298 gtgtcagtgtccgtgtccgtatccgtgcttcatag 332  Q
    ||||| |||||||||||||||||||||||||||||    
T  5137484 gtgtccgtgtccgtgtccgtatccgtgcttcatag 5137518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 317
Target Start/End: Complemental strand, 5813652 - 5813569
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtccgt 317  Q
    |||||||||||||||||| ||||||| || |||||||         |||||||||||||||||| ||||||| |||||||| |||||    
T  5813652 ccgacaccgacacttgtatttacactaaaatatgtgacttttt---caaattattagctgtgtcggcgtgtccgtgtccgtatccgt 5813569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 314
Target Start/End: Original strand, 13436964 - 13437043
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtc 314  Q
    |||||||||||||||| |||||  ||||||||||||         |||||||||||||||||| |||||||||||||| ||||    
T  13436964 cgacaccgacacttgttattaccatgaattatgtgatttttt---caaattattagctgtgtcggcgtgtcagtgtccatgtc 13437043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 311
Target Start/End: Original strand, 25192389 - 25192423
Alignment:
Q  277 caaattattagctgtgtcagcgtgtcagtgtccgt 311  Q
    |||||||||||||||||| ||||||||||||||||    
T  25192389 caaattattagctgtgtcggcgtgtcagtgtccgt 25192423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 267
Target Start/End: Complemental strand, 31557054 - 31557020
Alignment:
Q  233 gacaccgacacttgtaattacactgaattatgtga 267  Q
    |||||||| ||||||||||||||||||||||||||    
T  31557054 gacaccgaaacttgtaattacactgaattatgtga 31557020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 15816063 - 15816096
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccg 233  Q
    ||||||||||||| ||||||||||||||||||||    
T  15816063 aagcacggacacttctcggattaggcgtgtcccg 15816096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 16988027 - 16987994
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccg 233  Q
    ||||||||||||||||||||||||| ||||||||    
T  16988027 aagcacggacactcctcggattaggggtgtcccg 16987994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 17751770 - 17751737
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccg 233  Q
    |||| |||||||||||||||||||||||||||||    
T  17751770 aagcgcggacactcctcggattaggcgtgtcccg 17751737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 17760757 - 17760724
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccg 233  Q
    |||| |||||||||||||||||||||||||||||    
T  17760757 aagcgcggacactcctcggattaggcgtgtcccg 17760724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 267
Target Start/End: Complemental strand, 18407772 - 18407743
Alignment:
Q  238 cgacacttgtaattacactgaattatgtga 267  Q
    ||||||||||||||||||||||||||||||    
T  18407772 cgacacttgtaattacactgaattatgtga 18407743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 22652101 - 22652068
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccg 233  Q
    |||||||||||||||||||||||| |||||||||    
T  22652101 aagcacggacactcctcggattagacgtgtcccg 22652068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 25566944 - 25566911
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccg 233  Q
    |||||| |||||||||||||||||||||||||||    
T  25566944 aagcacagacactcctcggattaggcgtgtcccg 25566911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 29510238 - 29510271
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccg 233  Q
    ||||||||||||||||||||||||| ||||||||    
T  29510238 aagcacggacactcctcggattaggtgtgtcccg 29510271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 39820542 - 39820509
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccg 233  Q
    ||||||||||||| ||||||||||||||||||||    
T  39820542 aagcacggacacttctcggattaggcgtgtcccg 39820509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 332
Target Start/End: Original strand, 3951616 - 3951644
Alignment:
Q  304 gtgtccgtgtccgtatccgtgcttcatag 332  Q
    |||||||||||||||||||||||||||||    
T  3951616 gtgtccgtgtccgtatccgtgcttcatag 3951644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 267
Target Start/End: Original strand, 4786337 - 4786373
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtga 267  Q
    ||||||||||||| | |||||||||||||||||||||    
T  4786337 ccgacaccgacacatataattacactgaattatgtga 4786373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 263
Target Start/End: Original strand, 15023256 - 15023288
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattat 263  Q
    |||||| ||||||||||||||||||||||||||    
T  15023256 ccgacatcgacacttgtaattacactgaattat 15023288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 332
Target Start/End: Original strand, 20785546 - 20785574
Alignment:
Q  304 gtgtccgtgtccgtatccgtgcttcatag 332  Q
    |||||||||||||||||||||||||||||    
T  20785546 gtgtccgtgtccgtatccgtgcttcatag 20785574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 332
Target Start/End: Original strand, 24413647 - 24413675
Alignment:
Q  304 gtgtccgtgtccgtatccgtgcttcatag 332  Q
    |||||||||||||||||||||||||||||    
T  24413647 gtgtccgtgtccgtatccgtgcttcatag 24413675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 267
Target Start/End: Complemental strand, 27213639 - 27213571
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccgaca-ccgacacttgtaattacactgaattatgtga 267  Q
    ||||||||||||| |||||||||| |||||||||    ||||||| | |||||||| ||||||||||||    
T  27213639 aagcacggacacttctcggattagccgtgtcccggtgtccgacacatataattacagtgaattatgtga 27213571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 4e-20; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 200 - 314
Target Start/End: Complemental strand, 27945132 - 27945021
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgt 299  Q
    ||||||||||||||||||  ||||||||| | |||||||||||||||||||||||||||||||||| |         |||||||||||  ||||| ||||    
T  27945132 aagcacggacactcctcgagttaggcgtgacacgacaccgacacttgtaattacactgaattatgtaa---ttttctcaaattattagtggtgtcggcgt 27945036  T
Q  300 gtcagtgtccgtgtc 314  Q
    |||||||||||||||    
T  27945035 gtcagtgtccgtgtc 27945021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 231 - 333
Target Start/End: Complemental strand, 15680869 - 15680770
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtccgtatccgtgcttcat 330  Q
    ||||||||||||||| |||||||||| ||||||||||           ||||||||||| |||| |||||||||||||| ||||||||||||||||||||    
T  15680869 ccgacaccgacacttataattacactaaattatgtgatttttttt---aattattagctatgtcggcgtgtcagtgtccatgtccgtatccgtgcttcat 15680773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 232 - 333
Target Start/End: Original strand, 18215186 - 18215284
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtccgtatccgtgcttcata 331  Q
    |||||||||||||||||| ||||||| |||||||||         |||||||||||||| ||| |||||| |||||||||||| | ||||||||||||||    
T  18215186 cgacaccgacacttgtaactacactgcattatgtgatttttt---caaattattagctgcgtcggcgtgttagtgtccgtgtctgcatccgtgcttcata 18215282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 232 - 314
Target Start/End: Original strand, 5409836 - 5409915
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtc 314  Q
    |||||||||||||||||||| |||||||||||||||         ||||||||||||||| ||||||||||||||||| ||||    
T  5409836 cgacaccgacacttgtaattgcactgaattatgtga---ttttttcaaattattagctgtatcagcgtgtcagtgtccatgtc 5409915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 278 - 332
Target Start/End: Original strand, 7197340 - 7197394
Alignment:
Q  278 aaattattagctgtgtcagcgtgtcagtgtccgtgtccgtatccgtgcttcatag 332  Q
    ||||||||||||||||| |||||||| |||| |||| ||||||||||||||||||    
T  7197340 aaattattagctgtgtcggcgtgtcaatgtctgtgttcgtatccgtgcttcatag 7197394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 232 - 314
Target Start/End: Complemental strand, 24339701 - 24339622
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtc 314  Q
    ||||||||||||||||||||||||||||||||||||         |||||||||||||||||| |||||||| ||||| ||||    
T  24339701 cgacaccgacacttgtaattacactgaattatgtga---ttttttcaaattattagctgtgtcggcgtgtcaatgtccatgtc 24339622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 277 - 331
Target Start/End: Complemental strand, 25791670 - 25791616
Alignment:
Q  277 caaattattagctgtgtcagcgtgtcagtgtccgtgtccgtatccgtgcttcata 331  Q
    ||||| |||||| ||||| ||||||||||||| ||||||||||||||||||||||    
T  25791670 caaataattagcggtgtcggcgtgtcagtgtctgtgtccgtatccgtgcttcata 25791616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 277 - 312
Target Start/End: Original strand, 12010022 - 12010057
Alignment:
Q  277 caaattattagctgtgtcagcgtgtcagtgtccgtg 312  Q
    ||||||||||||||||||||||||||||||||||||    
T  12010022 caaattattagctgtgtcagcgtgtcagtgtccgtg 12010057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 267
Target Start/End: Complemental strand, 18039058 - 18039023
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtga 267  Q
    ||||||||||||||||||||||||||||||||||||    
T  18039058 cgacaccgacacttgtaattacactgaattatgtga 18039023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 267
Target Start/End: Complemental strand, 21560562 - 21560527
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtga 267  Q
    ||||||||||||||||||||||||||||||||||||    
T  21560562 cgacaccgacacttgtaattacactgaattatgtga 21560527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 265
Target Start/End: Complemental strand, 21880212 - 21880178
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgt 265  Q
    |||||||||||||||||||||||||||||||||||    
T  21880212 ccgacaccgacacttgtaattacactgaattatgt 21880178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 309
Target Start/End: Complemental strand, 25481962 - 25481887
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtcc 309  Q
    |||||||| ||||||||||||||||||||||||||||         |||||||||||||||||| |||||||| |||||    
T  25481962 ccgacaccaacacttgtaattacactgaattatgtga---ttttttcaaattattagctgtgtcggcgtgtcattgtcc 25481887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 333
Target Start/End: Original strand, 26033465 - 26033557
Alignment:
Q  236 accgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtccgtatccgtgcttcatagg 333  Q
    ||||||||||||||||||||||||||||||||         |||||||||||||| ||||  ||||| ||||| || |||||||||||| ||||||||    
T  26033465 accgacacttgtaattacactgaattatgtga---ttttttcaaattattagctgcgtca--gtgtccgtgtctgtatccgtatccgtgattcatagg 26033557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 265
Target Start/End: Complemental strand, 28155668 - 28155596
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcc-------cgacaccgacacttgtaattacactgaattatgt 265  Q
    ||||||||||| |||| |||||||||||||||       |||||||||||||||||||||||| |||||||||    
T  28155668 aagcacggacattccttggattaggcgtgtcctggtgtccgacaccgacacttgtaattacaccgaattatgt 28155596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 5409776 - 5409809
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccg 233  Q
    ||||||||||||||||||||||||||||||||||    
T  5409776 aagcacggacactcctcggattaggcgtgtcccg 5409809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 233 - 314
Target Start/End: Original strand, 11061077 - 11061155
Alignment:
Q  233 gacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtc 314  Q
    |||||||||||||||||||| ||| ||||||||||         |||||||||||||||||| | |||||||||||||||||    
T  11061077 gacaccgacacttgtaattatactaaattatgtgatttttt---caaattattagctgtgtcggtgtgtcagtgtccgtgtc 11061155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 277 - 314
Target Start/End: Complemental strand, 24105695 - 24105658
Alignment:
Q  277 caaattattagctgtgtcagcgtgtcagtgtccgtgtc 314  Q
    |||||||||||||||||| |||||||||||||||||||    
T  24105695 caaattattagctgtgtcggcgtgtcagtgtccgtgtc 24105658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 267
Target Start/End: Complemental strand, 3721172 - 3721117
Alignment:
Q  211 ctcctcggattaggcgtgtcccgacaccgacacttgtaattacactgaattatgtga 267  Q
    ||||||||||||||||||||| ||||||||||| | |||||| ||| ||||||||||    
T  3721172 ctcctcggattaggcgtgtcc-gacaccgacacatataattatactaaattatgtga 3721117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 11072315 - 11072259
Alignment:
Q  277 caaattattagctgtgtcagcgtgtcagtgtccgtgtccgtatccgtgcttcatagg 333  Q
    |||||||||| | ||||| ||||||| |||| ||||||||||||| |||||||||||    
T  11072315 caaattattatcggtgtcggcgtgtctgtgttcgtgtccgtatccatgcttcatagg 11072259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 333
Target Start/End: Original strand, 26019673 - 26019729
Alignment:
Q  277 caaattattagctgtgtcagcgtgtcagtgtccgtgtccgtatccgtgcttcatagg 333  Q
    ||||||| |||| ||| | |||||||||  |||||||||||||||||||||||||||    
T  26019673 caaattactagcggtgccggcgtgtcaggatccgtgtccgtatccgtgcttcatagg 26019729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 32308137 - 32308081
Alignment:
Q  277 caaattattagctgtgtcagcgtgtcagtgtccgtgtccgtatccgtgcttcatagg 333  Q
    |||||||||||| ||||| |||||||||||||| ||| |||||  ||||||||||||    
T  32308137 caaattattagcggtgtcggcgtgtcagtgtccatgttcgtatttgtgcttcatagg 32308081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 267
Target Start/End: Complemental strand, 2334309 - 2334274
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtga 267  Q
    ||||||||||||||||||||||||| ||||||||||    
T  2334309 cgacaccgacacttgtaattacactaaattatgtga 2334274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 267
Target Start/End: Complemental strand, 3991383 - 3991348
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtga 267  Q
    ||||||||||||||||||||| ||||||||||||||    
T  3991383 cgacaccgacacttgtaattatactgaattatgtga 3991348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 267
Target Start/End: Original strand, 9408334 - 9408369
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtga 267  Q
    ||||||||||||||||||||||||| ||||||||||    
T  9408334 cgacaccgacacttgtaattacactaaattatgtga 9408369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 267
Target Start/End: Complemental strand, 9778559 - 9778524
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtga 267  Q
    ||||||||||||||||||||| ||||||||||||||    
T  9778559 cgacaccgacacttgtaattatactgaattatgtga 9778524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 263
Target Start/End: Original strand, 11272586 - 11272617
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattat 263  Q
    ||||||||||||||||||||||||||||||||    
T  11272586 cgacaccgacacttgtaattacactgaattat 11272617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 314
Target Start/End: Complemental strand, 13770750 - 13770671
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtc 314  Q
    ||||| |||||||||||||||||||||||||||| |          ||||||||||||||||| |||| ||||||||||||||    
T  13770750 cgacaacgacacttgtaattacactgaattatgtaattttttt---aaattattagctgtgtcggcgtatcagtgtccgtgtc 13770671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 200 - 231
Target Start/End: Original strand, 29763134 - 29763165
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcc 231  Q
    ||||||||||||||||||||||||||||||||    
T  29763134 aagcacggacactcctcggattaggcgtgtcc 29763165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 267
Target Start/End: Original strand, 32094020 - 32094055
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtga 267  Q
    ||||||||||| ||||||||||||||||||||||||    
T  32094020 cgacaccgacatttgtaattacactgaattatgtga 32094055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 200 - 231
Target Start/End: Complemental strand, 35862065 - 35862034
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcc 231  Q
    ||||||||||||||||||||||||||||||||    
T  35862065 aagcacggacactcctcggattaggcgtgtcc 35862034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 267
Target Start/End: Complemental strand, 7438764 - 7438730
Alignment:
Q  233 gacaccgacacttgtaattacactgaattatgtga 267  Q
    |||||||||||||||||||||| ||||||||||||    
T  7438764 gacaccgacacttgtaattacattgaattatgtga 7438730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 330
Target Start/End: Original strand, 11665482 - 11665536
Alignment:
Q  277 caaattattagctgtgtcagcgtgtcagtgtcc-gtgtccgtatccgtgcttcat 330  Q
    ||||||||||| ||||||||||||||| | ||| |||||||||||||| ||||||    
T  11665482 caaattattagttgtgtcagcgtgtcaatatccagtgtccgtatccgttcttcat 11665536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 332
Target Start/End: Complemental strand, 19213807 - 19213773
Alignment:
Q  298 gtgtcagtgtccgtgtccgtatccgtgcttcatag 332  Q
    ||||||||||||||||||| |||||||||||||||    
T  19213807 gtgtcagtgtccgtgtccgcatccgtgcttcatag 19213773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 234
Target Start/End: Original strand, 28973886 - 28973920
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccga 234  Q
    |||||||||||| ||||||||||||||||||||||    
T  28973886 aagcacggacacacctcggattaggcgtgtcccga 28973920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 267
Target Start/End: Complemental strand, 33994270 - 33994236
Alignment:
Q  233 gacaccgacacttgtaattacactgaattatgtga 267  Q
    ||||||||||||||||||| |||||||||||||||    
T  33994270 gacaccgacacttgtaattgcactgaattatgtga 33994236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 598322 - 598289
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccg 233  Q
    ||||||||||||| ||||||||||||||||||||    
T  598322 aagcacggacacttctcggattaggcgtgtcccg 598289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 6490830 - 6490797
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccg 233  Q
    ||||||||||||||||||||||| ||||||||||    
T  6490830 aagcacggacactcctcggattaagcgtgtcccg 6490797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 8842284 - 8842317
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccg 233  Q
    |||||||||||||||| |||||||||||||||||    
T  8842284 aagcacggacactccttggattaggcgtgtcccg 8842317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 9778619 - 9778586
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccg 233  Q
    |||||||||||||||| |||||||||||||||||    
T  9778619 aagcacggacactccttggattaggcgtgtcccg 9778586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 24339767 - 24339734
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccg 233  Q
    |||||||| |||||||||||||||||||||||||    
T  24339767 aagcacgggcactcctcggattaggcgtgtcccg 24339734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 261
Target Start/End: Complemental strand, 25822714 - 25822685
Alignment:
Q  232 cgacaccgacacttgtaattacactgaatt 261  Q
    ||||||||||||||||||||||||||||||    
T  25822714 cgacaccgacacttgtaattacactgaatt 25822685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 29812603 - 29812636
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccg 233  Q
    ||||||||||||| ||||||||||||||||||||    
T  29812603 aagcacggacacttctcggattaggcgtgtcccg 29812636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 229
Target Start/End: Complemental strand, 30813911 - 30813882
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgt 229  Q
    ||||||||||||||||||||||||||||||    
T  30813911 aagcacggacactcctcggattaggcgtgt 30813882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 32287408 - 32287441
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccg 233  Q
    ||||||||||||||||||||||||| ||||||||    
T  32287408 aagcacggacactcctcggattaggtgtgtcccg 32287441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 331
Target Start/End: Complemental strand, 37742539 - 37742486
Alignment:
Q  278 aaattattagctgtgtcagcgtgtcagtgtccgtgtccgtatccgtgcttcata 331  Q
    ||||||||||  ||||| ||||| ||||||||||||| ||||||||| ||||||    
T  37742539 aaattattagtggtgtcggcgtggcagtgtccgtgtctgtatccgtgtttcata 37742486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 40287307 - 40287340
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccg 233  Q
    |||||||||||||||||||||||||| |||||||    
T  40287307 aagcacggacactcctcggattaggcatgtcccg 40287340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 43027409 - 43027442
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccg 233  Q
    |||||||||||||| |||||||||||||||||||    
T  43027409 aagcacggacactcatcggattaggcgtgtcccg 43027442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 232
Target Start/End: Complemental strand, 3991427 - 3991395
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtccc 232  Q
    |||| ||||||||||||||||||||||||||||    
T  3991427 aagcccggacactcctcggattaggcgtgtccc 3991395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 332
Target Start/End: Complemental strand, 9778480 - 9778452
Alignment:
Q  304 gtgtccgtgtccgtatccgtgcttcatag 332  Q
    |||||||||||||||||||||||||||||    
T  9778480 gtgtccgtgtccgtatccgtgcttcatag 9778452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 267
Target Start/End: Complemental strand, 19213863 - 19213827
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtga 267  Q
    |||||||||||||||||| |||||||| |||||||||    
T  19213863 ccgacaccgacacttgtatttacactgcattatgtga 19213827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 232
Target Start/End: Original strand, 32093959 - 32093991
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtccc 232  Q
    ||||||| |||||||||||||||||||||||||    
T  32093959 aagcacgaacactcctcggattaggcgtgtccc 32093991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 6e-19; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 200 - 267
Target Start/End: Original strand, 21256953 - 21257021
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcc-cgacaccgacacttgtaattacactgaattatgtga 267  Q
    ||||||||||||||||||||||||| |||||| ||| ||||||||||||||||| ||||||||||||||    
T  21256953 aagcacggacactcctcggattaggtgtgtccacgataccgacacttgtaattatactgaattatgtga 21257021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 204 - 267
Target Start/End: Complemental strand, 7928536 - 7928474
Alignment:
Q  204 acggacactcctcggattaggcgtgtcccgacaccgacacttgtaattacactgaattatgtga 267  Q
    ||||||||||||| |||||||||||||| ||||||||||| | |||||||||||||||||||||    
T  7928536 acggacactcctcagattaggcgtgtcc-gacaccgacacatataattacactgaattatgtga 7928474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 277 - 332
Target Start/End: Complemental strand, 40052349 - 40052295
Alignment:
Q  277 caaattattagctgtgtcagcgtgtcagtgtccgtgtccgtatccgtgcttcatag 332  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  40052349 caaattattagctgtgtcggcgtgtcagtgt-cgtgtccgtatccgtgcttcatag 40052295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 235 - 332
Target Start/End: Complemental strand, 26508166 - 26508067
Alignment:
Q  235 caccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtc-----cgtgtccgtatccgtgcttca 329  Q
    |||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||| ||     ||||||||||||||| |||||    
T  26508166 caccgacacttgtaattacactgaattatgtga---ttttttcaaattattagctgtgtcagcgtgtcagtatctgtatcgtgtccgtatccgttcttca 26508070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 234 - 331
Target Start/End: Complemental strand, 20503522 - 20503429
Alignment:
Q  234 acaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtccgtatccgtgcttcata 331  Q
    |||||||||||||||||||||||||||||||| |         ||||||||| | |||||| ||||||||||||| ||||||||||||||||||||||    
T  20503522 acaccgacacttgtaattacactgaattatgtcatttttt---caaattatttgttgtgtcggcgtgtcagtgtc-gtgtccgtatccgtgcttcata 20503429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 277 - 332
Target Start/End: Complemental strand, 33359778 - 33359722
Alignment:
Q  277 caaattattagctgtgtcagcgtgtcagtgtccgtgtcc-gtatccgtgcttcatag 332  Q
    |||||||||||||||||||||||||||||||| |||||| || ||||||||||||||    
T  33359778 caaattattagctgtgtcagcgtgtcagtgtctgtgtccggtgtccgtgcttcatag 33359722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 232 - 314
Target Start/End: Complemental strand, 28918060 - 28917981
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtc 314  Q
    ||||||||||||||||||||||||||||||||||||         ||||||||||||| |||| |||||||||| ||||||||    
T  28918060 cgacaccgacacttgtaattacactgaattatgtga---ttttttcaaattattagctatgtcggcgtgtcagtttccgtgtc 28917981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 314
Target Start/End: Original strand, 10335250 - 10335365
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtc----ccgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtca 295  Q
    ||||||| |||||||||  ||||||||||||    |||||||||||||||||| ||||||| || |||||||         ||||||||||| ||||||     
T  10335250 aagcacgaacactcctccaattaggcgtgtcgtgcccgacaccgacacttgtatttacactaaaatatgtga---ctttttcaaattattagttgtgtcg 10335346  T
Q  296 gcgtgtcagtgtccgtgtc 314  Q
    |||||||||||||||||||    
T  10335347 gcgtgtcagtgtccgtgtc 10335365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 316
Target Start/End: Complemental strand, 10955012 - 10954930
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtccg 316  Q
    ||||||||||||||||| |||||||||||||||||||         ||||||||||| |||||| |||||||||||| ||||||||    
T  10955012 ccgacaccgacacttgtgattacactgaattatgtga---ttttttcaaattattagttgtgtcggcgtgtcagtgttcgtgtccg 10954930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 332
Target Start/End: Complemental strand, 28812574 - 28812477
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccg-tgtccgtatccgtgcttcat 330  Q
    |||||||||||||||||| |||||||||||||||||         ||||||||||| |||||| ||||||| ||||||| |||| |||||||||||||||    
T  28812574 cgacaccgacacttgtaactacactgaattatgtga---tttcttcaaattattagttgtgtcggcgtgtc-gtgtccgttgtctgtatccgtgcttcat 28812479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 332
Target Start/End: Complemental strand, 34910376 - 34910279
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtc-cgtgtccgtatccgtgcttcat 330  Q
    |||||||||| |||||||||||||||||||||||||         ||||||||||| |||||| ||||||| |||||  |||||||||||||||||||||    
T  34910376 cgacaccgactcttgtaattacactgaattatgtga---ttttttcaaattattagttgtgtcggcgtgtc-gtgtctggtgtccgtatccgtgcttcat 34910281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 267
Target Start/End: Original strand, 35994709 - 35994773
Alignment:
Q  199 aaagcacggacactcctcggattaggcgtgtcccgacaccgacacttgtaattacactgaattatgtga 267  Q
    ||||||||||||||| ||||||||  ||||||| ||||| |||||||||||||||||||||||||||||    
T  35994709 aaagcacggacactcttcggatta--cgtgtcc-gacac-gacacttgtaattacactgaattatgtga 35994773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 277 - 317
Target Start/End: Original strand, 10318076 - 10318116
Alignment:
Q  277 caaattattagctgtgtcagcgtgtcagtgtccgtgtccgt 317  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  10318076 caaattattagctgtgtcggcgtgtcagtgtccgtgtccgt 10318116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 231 - 267
Target Start/End: Complemental strand, 25775569 - 25775533
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtga 267  Q
    |||||||||||||||||||||||||||||||||||||    
T  25775569 ccgacaccgacacttgtaattacactgaattatgtga 25775533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 314
Target Start/End: Original strand, 8587020 - 8587100
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtc 314  Q
    |||||||||||||||||||||||||| ||||||||||         ||||||| ||| |||||| |||||||||||||||||||    
T  8587020 ccgacaccgacacttgtaattacacttaattatgtga---ttttttcaaattactagatgtgtcggcgtgtcagtgtccgtgtc 8587100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 314
Target Start/End: Complemental strand, 55401135 - 55401055
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtc 314  Q
    |||||||||||||||||||||||||| ||||||||||         ||||||||||| |||||| |||| ||||||||||||||    
T  55401135 ccgacaccgacacttgtaattacactaaattatgtga---ttttttcaaattattagttgtgtcggcgtatcagtgtccgtgtc 55401055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 329
Target Start/End: Complemental strand, 14209172 - 14209079
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtccgtatccgtgcttca 329  Q
    |||||| |||||||||||||||||||||||||||||          |||||||||| |||||| ||||||| ||||| ||||||| ||||||||||||    
T  14209172 cgacactgacacttgtaattacactgaattatgtgatttttta---aaattattagttgtgtcggcgtgtc-gtgtctgtgtccgcatccgtgcttca 14209079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 314
Target Start/End: Complemental strand, 14829748 - 14829670
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtc 314  Q
    ||||||||||||||||||||||  ||||||||||||         |||||||||||||||||| ||||||||||||| |||||    
T  14829748 cgacaccgacacttgtaattaccatgaattatgtgattttt----caaattattagctgtgtcggcgtgtcagtgtctgtgtc 14829670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 277 - 314
Target Start/End: Original strand, 3865598 - 3865635
Alignment:
Q  277 caaattattagctgtgtcagcgtgtcagtgtccgtgtc 314  Q
    |||||||||||||||||| |||||||||||||||||||    
T  3865598 caaattattagctgtgtcggcgtgtcagtgtccgtgtc 3865635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 20503579 - 20503546
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccg 233  Q
    ||||||||||||||||||||||||||||||||||    
T  20503579 aagcacggacactcctcggattaggcgtgtcccg 20503546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 21479178 - 21479104
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtc 308  Q
    |||||||||||||| |||||||||||||||| |||||         |||||||||||||||||| |||||||||||||    
T  21479178 ccgacaccgacactagtaattacactgaattgtgtga---ttttttcaaattattagctgtgtcggcgtgtcagtgtc 21479104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 34185057 - 34185090
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccg 233  Q
    ||||||||||||||||||||||||||||||||||    
T  34185057 aagcacggacactcctcggattaggcgtgtcccg 34185090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 307
Target Start/End: Original strand, 4987294 - 4987363
Alignment:
Q  235 caccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgt 307  Q
    |||| ||||||||||||||||||||||||||||         |||||||||||||||||| ||||||||||||    
T  4987294 caccaacacttgtaattacactgaattatgtga---ttttttcaaattattagctgtgtcggcgtgtcagtgt 4987363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 267
Target Start/End: Complemental strand, 8593197 - 8593161
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtga 267  Q
    |||||||||||||||||||||| ||||||||||||||    
T  8593197 ccgacaccgacacttgtaattatactgaattatgtga 8593161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 267
Target Start/End: Original strand, 51206352 - 51206388
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtga 267  Q
    |||||||||||||||||| ||||||||||||||||||    
T  51206352 ccgacaccgacacttgtatttacactgaattatgtga 51206388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 267
Target Start/End: Complemental strand, 1509598 - 1509563
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtga 267  Q
    ||||||||||||||||||||||||| ||||||||||    
T  1509598 cgacaccgacacttgtaattacactaaattatgtga 1509563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 200 - 231
Target Start/End: Original strand, 4990917 - 4990948
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcc 231  Q
    ||||||||||||||||||||||||||||||||    
T  4990917 aagcacggacactcctcggattaggcgtgtcc 4990948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 277 - 328
Target Start/End: Original strand, 6525722 - 6525773
Alignment:
Q  277 caaattattagctgtgtcagcgtgtcagtgtccgtgtccgtatccgtgcttc 328  Q
    |||||||||||| |||||  | ||||||||| ||||||||||||||||||||    
T  6525722 caaattattagcggtgtcgacatgtcagtgtacgtgtccgtatccgtgcttc 6525773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 231 - 314
Target Start/End: Complemental strand, 8383317 - 8383237
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtc 314  Q
    ||||||||||||||| ||||||||||||||||| |||         |||||||||||| ||||| |||||||| ||||||||||    
T  8383317 ccgacaccgacacttataattacactgaattatatga---ttttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtc 8383237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 233 - 332
Target Start/End: Original strand, 22774071 - 22774167
Alignment:
Q  233 gacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtccgtatccgtgcttcatag 332  Q
    ||||||||||||| ||||||||||||| |||||||         | |||||||||  |||||  |||||| ||||| |||||||||||||||||||||||    
T  22774071 gacaccgacacttataattacactgaaatatgtgactttgt---ctaattattagtggtgtcgacgtgtctgtgtctgtgtccgtatccgtgcttcatag 22774167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 231 - 314
Target Start/End: Original strand, 26492204 - 26492284
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtc 314  Q
    |||||||||| |||||||||||||||||||| | |||         ||||||||||||| |||| |||||||||||||||||||    
T  26492204 ccgacaccgatacttgtaattacactgaattgtatgatttttt---caaattattagctctgtcggcgtgtcagtgtccgtgtc 26492284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 267
Target Start/End: Complemental strand, 27505305 - 27505270
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtga 267  Q
    ||||||||||||||||||||||||| ||||||||||    
T  27505305 cgacaccgacacttgtaattacacttaattatgtga 27505270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 267
Target Start/End: Original strand, 34185123 - 34185158
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtga 267  Q
    |||||||||||||||||||||||||||||| |||||    
T  34185123 cgacaccgacacttgtaattacactgaattgtgtga 34185158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 277 - 332
Target Start/End: Complemental strand, 37077375 - 37077320
Alignment:
Q  277 caaattattagctgtgtcagcgtgtcagtgtccgtgtccgtatccgtgcttcatag 332  Q
    |||||||||| | ||||| |||||||| ||||||||||  ||||||||||||||||    
T  37077375 caaattattatcggtgtcggcgtgtcactgtccgtgtctttatccgtgcttcatag 37077320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 267
Target Start/End: Original strand, 49651786 - 49651821
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtga 267  Q
    ||||||||||||||||||||||| ||||||||||||    
T  49651786 cgacaccgacacttgtaattacagtgaattatgtga 49651821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 267
Target Start/End: Complemental strand, 3865732 - 3865698
Alignment:
Q  233 gacaccgacacttgtaattacactgaattatgtga 267  Q
    |||||||||||||||||||| ||||||||||||||    
T  3865732 gacaccgacacttgtaattatactgaattatgtga 3865698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 230
Target Start/End: Original strand, 8789493 - 8789523
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtc 230  Q
    |||||||||||||||||||||||||||||||    
T  8789493 aagcacggacactcctcggattaggcgtgtc 8789523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 230
Target Start/End: Complemental strand, 8842443 - 8842413
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtc 230  Q
    |||||||||||||||||||||||||||||||    
T  8842443 aagcacggacactcctcggattaggcgtgtc 8842413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 234
Target Start/End: Complemental strand, 11610623 - 11610589
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccga 234  Q
    ||||||||||||||||| |||||||||||||||||    
T  11610623 aagcacggacactcctcagattaggcgtgtcccga 11610589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 332
Target Start/End: Original strand, 13845580 - 13845614
Alignment:
Q  298 gtgtcagtgtccgtgtccgtatccgtgcttcatag 332  Q
    ||||| |||||||||||||||||||||||||||||    
T  13845580 gtgtcggtgtccgtgtccgtatccgtgcttcatag 13845614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 265
Target Start/End: Original strand, 16000015 - 16000049
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgt 265  Q
    |||||||||||||||||| ||||||||||||||||    
T  16000015 ccgacaccgacacttgtagttacactgaattatgt 16000049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 267
Target Start/End: Original strand, 25948851 - 25948922
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcc----cgacaccgacacttgtaattacactgaattatgtga 267  Q
    ||||||||||| |||| ||||||  |||||||    ||||||| |||||| |||||||||||||||||||||    
T  25948851 aagcacggacattccttggattacacgtgtccgacacgacaccaacacttataattacactgaattatgtga 25948922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 332
Target Start/End: Original strand, 40993334 - 40993432
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtccgtatccgtgcttcat 330  Q
    ||||||||||||| | |||||||||||||||||||||          ||||||||||| |||||   ||||| |||| ||||||||||||||||||||||    
T  40993334 ccgacaccgacacatataattacactgaattatgtgatttttttt--aaattattagcggtgtcgaggtgtccgtgt-cgtgtccgtatccgtgcttcat 40993430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 230
Target Start/End: Complemental strand, 55401189 - 55401159
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtc 230  Q
    |||||||||||||||||||||||||||||||    
T  55401189 aagcacggacactcctcggattaggcgtgtc 55401159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 333
Target Start/End: Original strand, 750706 - 750735
Alignment:
Q  304 gtgtccgtgtccgtatccgtgcttcatagg 333  Q
    ||||||||||||||||||||||||||||||    
T  750706 gtgtccgtgtccgtatccgtgcttcatagg 750735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 331
Target Start/End: Complemental strand, 1852641 - 1852600
Alignment:
Q  290 gtgtcagcgtgtcagtgtccgtgtccgtatccgtgcttcata 331  Q
    ||||||||||||| |||||||| || ||||||||||||||||    
T  1852641 gtgtcagcgtgtccgtgtccgtatctgtatccgtgcttcata 1852600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 233
Target Start/End: Original strand, 4987229 - 4987258
Alignment:
Q  204 acggacactcctcggattaggcgtgtcccg 233  Q
    ||||||||||||||||||||||||||||||    
T  4987229 acggacactcctcggattaggcgtgtcccg 4987258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 265
Target Start/End: Original strand, 4990967 - 4991000
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgt 265  Q
    |||| |||||||||||||||||||||||||||||    
T  4990967 cgacgccgacacttgtaattacactgaattatgt 4991000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 14979198 - 14979137
Alignment:
Q  277 caaattattagctgtgtcagcgtgtcagtgtcc-----gtgtccgtatccgtgcttcatagg 333  Q
    |||||||||||||||||| ||||| || |||||     ||||||||||||||||||||||||    
T  14979198 caaattattagctgtgtcggcgtgccattgtccttgtcgtgtccgtatccgtgcttcatagg 14979137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 14979263 - 14979230
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccg 233  Q
    ||||||||||||||||||| ||||||||||||||    
T  14979263 aagcacggacactcctcgggttaggcgtgtcccg 14979230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 27505365 - 27505332
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccg 233  Q
    |||||||||||||||||||||||||| |||||||    
T  27505365 aagcacggacactcctcggattaggcatgtcccg 27505332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 34910431 - 34910398
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccg 233  Q
    |||||||||||||||||||||||| |||||||||    
T  34910431 aagcacggacactcctcggattagacgtgtcccg 34910398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 40052426 - 40052393
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccg 233  Q
    ||||||| ||||||||||||||||||||||||||    
T  40052426 aagcacgaacactcctcggattaggcgtgtcccg 40052393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 40993280 - 40993313
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccg 233  Q
    ||||| ||||||||||||||||||||||||||||    
T  40993280 aagcatggacactcctcggattaggcgtgtcccg 40993313  T

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Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 332
Target Start/End: Complemental strand, 14027987 - 14027959
Alignment:
Q  304 gtgtccgtgtccgtatccgtgcttcatag 332  Q
    |||||||||||||||||||||||||||||    
T  14027987 gtgtccgtgtccgtatccgtgcttcatag 14027959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 317
Target Start/End: Complemental strand, 21720781 - 21720741
Alignment:
Q  277 caaattattagctgtgtcagcgtgtcagtgtccgtgtccgt 317  Q
    |||||||||| | ||||| ||||||||||||||||||||||    
T  21720781 caaattattatcggtgtcggcgtgtcagtgtccgtgtccgt 21720741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 332
Target Start/End: Original strand, 23870622 - 23870650
Alignment:
Q  304 gtgtccgtgtccgtatccgtgcttcatag 332  Q
    |||||||||||||||||||||||||||||    
T  23870622 gtgtccgtgtccgtatccgtgcttcatag 23870650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 237 - 265
Target Start/End: Complemental strand, 35312108 - 35312080
Alignment:
Q  237 ccgacacttgtaattacactgaattatgt 265  Q
    |||||||||||||||||||||||||||||    
T  35312108 ccgacacttgtaattacactgaattatgt 35312080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 232
Target Start/End: Original strand, 41961584 - 41961616
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtccc 232  Q
    ||||||||||||| |||||||||||||||||||    
T  41961584 aagcacggacacttctcggattaggcgtgtccc 41961616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 332
Target Start/End: Complemental strand, 45451551 - 45451523
Alignment:
Q  304 gtgtccgtgtccgtatccgtgcttcatag 332  Q
    |||||||||||||||||||||||||||||    
T  45451551 gtgtccgtgtccgtatccgtgcttcatag 45451523  T

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Target: scaffold0103 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 240 - 321
Target Start/End: Complemental strand, 51862 - 51784
Alignment:
Q  240 acacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtccgtatcc 321  Q
    ||||||||||||||||||||||||||||         |||||||||||||||||| ||||||||||||||||||||||||||    
T  51862 acacttgtaattacactgaattatgtgatttttt---caaattattagctgtgtcggcgtgtcagtgtccgtgtccgtatcc 51784  T

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Target: scaffold0025 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 232 - 333
Target Start/End: Complemental strand, 23829 - 23729
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtcc-gtgtccgtatccgtgcttcat 330  Q
    ||||||||||||||||||||||||||||||||||||         |||||||||| ||||| ||| |||||||||||| |||| |||||||||| |||||    
T  23829 cgacaccgacacttgtaattacactgaattatgtga--tttttttcaaattattaactgtgacagtgtgtcagtgtccggtgttcgtatccgtgtttcat 23732  T
Q  331 agg 333  Q
    |||    
T  23731 agg 23729  T

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Target: scaffold0223 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 210 - 314
Target Start/End: Complemental strand, 20261 - 20152
Alignment:
Q  210 actcctcggattaggcgtgtccc--------gacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgt 301  Q
    |||||||||||||||||||||||        ||||| |||||||||||||||||||||||||||||         |||||||||||||||||| ||||||    
T  20261 actcctcggattaggcgtgtcccaccgacacgacactgacacttgtaattacactgaattatgtga---ttttttcaaattattagctgtgtcggcgtgt 20165  T
Q  302 cagtgtccgtgtc 314  Q
    || ||||||||||    
T  20164 cattgtccgtgtc 20152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 314
Target Start/End: Complemental strand, 13460 - 13380
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtc 314  Q
    ||||||||||| ||||||||| |||||||||||||||         ||||||||||| |||||| |||||||||||||||||||    
T  13460 ccgacaccgacccttgtaattgcactgaattatgtgattttct---caaattattagttgtgtcggcgtgtcagtgtccgtgtc 13380  T

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Target: scaffold0152 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 314
Target Start/End: Original strand, 21867 - 21947
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtc 314  Q
    ||||||||||| ||||||||| |||||||||||||||         ||||||||||| |||||| |||||||||||||||||||    
T  21867 ccgacaccgacccttgtaattgcactgaattatgtgattttct---caaattattagttgtgtcggcgtgtcagtgtccgtgtc 21947  T

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Target: scaffold0053 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 314
Target Start/End: Complemental strand, 8858 - 8778
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtc 314  Q
    |||||||||||||||||||||||||| ||| || |||         |||||||||||||||||| |||||||||||||||||||    
T  8858 ccgacaccgacacttgtaattacactaaataatatgatttttt---caaattattagctgtgtcggcgtgtcagtgtccgtgtc 8778  T

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Target: scaffold0004 (Bit Score: 36; Significance: 0.00000000003; HSPs: 4)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 307
Target Start/End: Complemental strand, 123686 - 123612
Alignment:
Q  233 gacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgt 307  Q
    |||||||||||||||||||||||||||||||||||          ||||||||||||||||  ||||||||||||    
T  123686 gacaccgacacttgtaattacactgaattatgtgattctttttttaaattattagctgtgttggcgtgtcagtgt 123612  T

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Target: scaffold0004; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 200 - 231
Target Start/End: Complemental strand, 92936 - 92905
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcc 231  Q
    ||||||||||||||||||||||||||||||||    
T  92936 aagcacggacactcctcggattaggcgtgtcc 92905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 317
Target Start/End: Complemental strand, 92859 - 92784
Alignment:
Q  239 gacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtccgt 317  Q
    ||||||||||||||||||||||||||| |         |||||||||||| ||||| |||||||||||||||| |||||    
T  92859 gacacttgtaattacactgaattatgtaattttct---caaattattagcggtgtcggcgtgtcagtgtccgtatccgt 92784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 265
Target Start/End: Complemental strand, 83219 - 83186
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgt 265  Q
    ||||||||||| ||||||||||||||||||||||    
T  83219 cgacaccgacatttgtaattacactgaattatgt 83186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 265
Target Start/End: Original strand, 45529 - 45563
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgt 265  Q
    |||||||||||||||||||||||||||||||||||    
T  45529 ccgacaccgacacttgtaattacactgaattatgt 45563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 314
Target Start/End: Complemental strand, 241653 - 241574
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtc 314  Q
    |||||||||||||  |||||||||| ||||||||||         |||||||||||||||||| |||||||||||||||||||    
T  241653 cgacaccgacactcataattacactaaattatgtgatttttc---caaattattagctgtgtcggcgtgtcagtgtccgtgtc 241574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 241719 - 241686
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccg 233  Q
    ||||||||||||| ||||||||||||||||||||    
T  241719 aagcacggacacttctcggattaggcgtgtcccg 241686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 312
Target Start/End: Original strand, 461 - 539
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtg 312  Q
    ||||||||||||||||||||||||||||||| |||||         |||||||||||| ||||| |||| ||||||||||||    
T  461 ccgacaccgacacttgtaattacactgaattttgtga---ttttttcaaattattagcagtgtcggcgtatcagtgtccgtg 539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 407 - 440
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtcccg 233  Q
    ||||||||||||||||||||||||| ||||||||    
T  407 aagcacggacactcctcggattaggtgtgtcccg 440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 232
Target Start/End: Original strand, 4826 - 4858
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtccc 232  Q
    |||||||||||||||||||||||||||||||||    
T  4826 aagcacggacactcctcggattaggcgtgtccc 4858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 267
Target Start/End: Original strand, 4884 - 4918
Alignment:
Q  233 gacaccgacacttgtaattacactgaattatgtga 267  Q
    |||||| ||||||||||||||||||||||||||||    
T  4884 gacaccaacacttgtaattacactgaattatgtga 4918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 232
Target Start/End: Complemental strand, 3422 - 3390
Alignment:
Q  200 aagcacggacactcctcggattaggcgtgtccc 232  Q
    |||||||||||||||||||||||||||||||||    
T  3422 aagcacggacactcctcggattaggcgtgtccc 3390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 267
Target Start/End: Complemental strand, 130538 - 130506
Alignment:
Q  235 caccgacacttgtaattacactgaattatgtga 267  Q
    |||||||||||||||||||||||||||||||||    
T  130538 caccgacacttgtaattacactgaattatgtga 130506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 267
Target Start/End: Complemental strand, 23479 - 23444
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtga 267  Q
    |||||||||||||| |||||||||||||||||||||    
T  23479 cgacaccgacacttataattacactgaattatgtga 23444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 332
Target Start/End: Complemental strand, 23399 - 23371
Alignment:
Q  304 gtgtccgtgtccgtatccgtgcttcatag 332  Q
    |||||||||||||||||||||||||||||    
T  23399 gtgtccgtgtccgtatccgtgcttcatag 23371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 267
Target Start/End: Original strand, 3849 - 3884
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtga 267  Q
    |||||| |||||||||||||||||||||||||||||    
T  3849 cgacactgacacttgtaattacactgaattatgtga 3884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 233 - 314
Target Start/End: Original strand, 178819 - 178898
Alignment:
Q  233 gacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtccgtgtc 314  Q
    ||||| ||||||||||||||||||||||||||  |         ||||||||||| |||||| |||||||||||||||||||    
T  178819 gacactgacacttgtaattacactgaattatg--atgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtc 178898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 265
Target Start/End: Complemental strand, 70338 - 70304
Alignment:
Q  231 ccgacaccgacacttgtaattacactgaattatgt 265  Q
    ||||||||||||||| |||||||||||||||||||    
T  70338 ccgacaccgacacttataattacactgaattatgt 70304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 332
Target Start/End: Complemental strand, 71784 - 71679
Alignment:
Q  232 cgacaccgacacttgtaattacactgaattatgtgannnnnnnnncaaattattagctgtgtcagcgtgtcagtgtc-----cg-tgtccgtatccgtgc 325  Q
    |||||| |||||| |||||||||||||||| |||||         |||||||||||||||||| |||||||||||||     || |||||||||||||||    
T  71784 cgacactgacactagtaattacactgaattgtgtgatttttttt-caaattattagctgtgtcggcgtgtcagtgtcgtgtccgatgtccgtatccgtgc 71686  T
Q  326 ttcatag 332  Q
    |||||||    
T  71685 ttcatag 71679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 267
Target Start/End: Original strand, 17750 - 17784
Alignment:
Q  233 gacaccgacacttgtaattacactgaattatgtga 267  Q
    |||||||||||||||||||||||| ||||||||||    
T  17750 gacaccgacacttgtaattacactaaattatgtga 17784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 333
Target Start/End: Complemental strand, 9870 - 9841
Alignment:
Q  304 gtgtccgtgtccgtatccgtgcttcatagg 333  Q
    ||||||||||||||||||||||||||||||    
T  9870 gtgtccgtgtccgtatccgtgcttcatagg 9841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 333
Target Start/End: Complemental strand, 63737 - 63708
Alignment:
Q  304 gtgtccgtgtccgtatccgtgcttcatagg 333  Q
    ||||||||||||||||||||||||||||||    
T  63737 gtgtccgtgtccgtatccgtgcttcatagg 63708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 265
Target Start/End: Complemental strand, 63831 - 63799
Alignment:
Q  233 gacaccgacacttgtaattacactgaattatgt 265  Q
    ||||||||||||||||||| |||||||||||||    
T  63831 gacaccgacacttgtaattgcactgaattatgt 63799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 231
Target Start/End: Complemental strand, 188512 - 188483
Alignment:
Q  202 gcacggacactcctcggattaggcgtgtcc 231  Q
    ||||||||||||||||||||||||||||||    
T  188512 gcacggacactcctcggattaggcgtgtcc 188483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 314
Target Start/End: Original strand, 225310 - 225347
Alignment:
Q  277 caaattattagctgtgtcagcgtgtcagtgtccgtgtc 314  Q
    |||||||||| ||||||| |||||||||||||||||||    
T  225310 caaattattatctgtgtcggcgtgtcagtgtccgtgtc 225347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 317
Target Start/End: Complemental strand, 2940 - 2900
Alignment:
Q  277 caaattattagctgtgtcagcgtgtcagtgtccgtgtccgt 317  Q
    ||||||||||||| ||| ||||||||||||||||| |||||    
T  2940 caaattattagctatgttagcgtgtcagtgtccgtatccgt 2900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 229
Target Start/End: Complemental strand, 3052 - 3024
Alignment:
Q  201 agcacggacactcctcggattaggcgtgt 229  Q
    |||||||||||||||||||||||||||||    
T  3052 agcacggacactcctcggattaggcgtgt 3024  T

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Target: scaffold0044 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 267
Target Start/End: Complemental strand, 53236 - 53204
Alignment:
Q  235 caccgacacttgtaattacactgaattatgtga 267  Q
    ||||||||||| |||||||||||||||||||||    
T  53236 caccgacacttataattacactgaattatgtga 53204  T

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