View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0322_high_6 (Length: 253)
Name: NF0322_high_6
Description: NF0322
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0322_high_6 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 7 - 253
Target Start/End: Complemental strand, 14804190 - 14803944
Alignment:
| Q |
7 |
ggagcagagaggagtgaagtagaatgcaaagtaatcacgaaggttgtagacggaaagagaaaaatgaaattcggaatggaatggcaattgttttgtcgtt |
106 |
Q |
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| T |
14804190 |
ggagcagaggggagtgaagtagaatgcaaagtaatcacgaaggttgtagacggaaagagaaaaatgaaattcggaatggaatggcaattgttttgtcgtt |
14804091 |
T |
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| Q |
107 |
taaatggatttcaagagggtgatgagttgatgtttacctttgttaacatgttaagatcaaatgtcatcaaagtgaggaagatttaaatgtaatttcagtg |
206 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
14804090 |
taaatggatttcaagagggtgatgagttgatgtttacctttgttaacatgtcaagatcaaatgtcatcaaagtgaggaagatttaaatgtaatctcagtg |
14803991 |
T |
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| Q |
207 |
tgttgaagatttcatttttcttattttcgtttatcttaatgtcatat |
253 |
Q |
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| T |
14803990 |
tgttgaagatttcatttttcttattttcgtttatcttaatgtcatat |
14803944 |
T |
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