View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0325-Insertion-2 (Length: 488)
Name: NF0325-Insertion-2
Description: NF0325
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0325-Insertion-2 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 481; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 481; E-Value: 0
Query Start/End: Original strand, 8 - 488
Target Start/End: Original strand, 2347499 - 2347979
Alignment:
| Q |
8 |
aatgtcacaacaatctacaggtgggttctgaagttcaagctgatttagttcaggattgatcaaaacatactcagtgttcattgaaagaaactttttgatg |
107 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2347499 |
aatgtcacaacaatctacaggtgggttctgaagttcaagctgatttagttcaggattgatcaaaacatactcagtgttcattgaaagaaactttttgatg |
2347598 |
T |
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| Q |
108 |
tagcgcaaaatcctacaaatagacgagaaactaggacgctgagacggatcagtttgccaacattttttgatcaaactcacaagatattttggcgaacgat |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2347599 |
tagcgcaaaatcctacaaatagacgagaaactaggacgctgagacggatcagtttgccaacattttttgatcaaactcacaagatattttggcgaacgat |
2347698 |
T |
|
| Q |
208 |
atggaaacaaaggtctctctcctgctttgatattttggttggttctaatcccttgaagatgattgtcctcaaaaggaattttccctgtcaacaactcaaa |
307 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2347699 |
atggaaacaaaggtctctctcctgctttgatattttggttggttctaatcccttgaagatgattgtcctcaaaaggaattttccctgtcaacaactcaaa |
2347798 |
T |
|
| Q |
308 |
acatatcataccaaagctatatgcatcggctttctctgagtacttacaagaggtaaaagcatttttcatttgttctagctcagttaaaacctcaggtgca |
407 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2347799 |
acatatcataccaaagctatatgcatcggctttctctgagtacttacaagaggtaaaagcatttttcatttgttctagctcagttaaaacctcaggtgca |
2347898 |
T |
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| Q |
408 |
taccaaattatagggttaatctcttcaccaattggattatgtgtcggtgaggatctagaagcattataaatttcaccattt |
488 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2347899 |
taccaaattatagggttaatctcttcaccaattggattatgtgtcggtgaggatctagaagcattataaatttcaccattt |
2347979 |
T |
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