View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0327_high_3 (Length: 318)
Name: NF0327_high_3
Description: NF0327
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0327_high_3 |
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Alignment Details
Target: chr8 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 28 - 309
Target Start/End: Complemental strand, 935416 - 935135
Alignment:
| Q |
28 |
caaatacttgtcagctttgagttattaaacaaatattaaactttacaaacgaatataacaattttacaccttagactaacgtgacaacaaagttaaactt |
127 |
Q |
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| T |
935416 |
caaatacttgtgagctttgagttattaaacaaatattaaactttacaaacgaatataacaattttacaccttagactaacgtgacaacaaagttaaactt |
935317 |
T |
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| Q |
128 |
ccatgttctaagagctttctttttctccttttaatgacttataaaaccaatttaatatatttataggccttatataactatttactcaaaactttcctcg |
227 |
Q |
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| T |
935316 |
ccatgttctaagagctttctttttctccttttaatgacttataaaacgaatttaatatatttataggccttatataactatttactcaaaactttcctcg |
935217 |
T |
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| Q |
228 |
aaaaataacaatctaaatgacttccaatacagaaaataaattgaccatcaaatcgaacaagtcaatacatatatagaataat |
309 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
935216 |
aaaaataacaatctaaatgacttccaatacagaaaataaattgaccatcaaatcgaacaagtcaatacatatatagagtaat |
935135 |
T |
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