View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0329_low_31 (Length: 261)
Name: NF0329_low_31
Description: NF0329
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0329_low_31 |
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Alignment Details
Target: chr8 (Bit Score: 144; Significance: 8e-76; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 92 - 235
Target Start/End: Original strand, 37316181 - 37316324
Alignment:
| Q |
92 |
catttaaatggtttaacttttctttcctccatattctagtctacttaatcttggtttctcacgttatagaaggttactctctttaagtaaattattacag |
191 |
Q |
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| T |
37316181 |
catttaaatggtttaacttttctttcctccatattctagtctacttaatcttggtttctcacgttatagaaggttactctctttaagtaaattattacag |
37316280 |
T |
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| Q |
192 |
tacacgattaaattaaattacaagactaatcttcaatttgacaa |
235 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37316281 |
tacacgattaaattaaattacaagactaatcttcaatttgacaa |
37316324 |
T |
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