View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0335-Insertion-3 (Length: 249)
Name: NF0335-Insertion-3
Description: NF0335
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0335-Insertion-3 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 7 - 249
Target Start/End: Original strand, 37597551 - 37597793
Alignment:
| Q |
7 |
aacttcgacaataagctgacacatacatatgtcaaattacaaaggttgaataccctcctatgacagtgctggtaacaaccaatgctcttcttcacatgtt |
106 |
Q |
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| T |
37597551 |
aacttcaacaataagctgacacatacatatgtcaaattacaaaggttgaataccctcctatgtcagtgctggtaacaaccaatgctcttcttcacatgtt |
37597650 |
T |
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| Q |
107 |
ttaagtacaacatgaattgacctgctttgttagttgttggaattttgtgaaatagtacatttatgtatatgcataacaaaacaatacctacctatgatag |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
37597651 |
ttaagtacaacatgaattgacctgctttgttagttgttggaattttgtgaaatagtacatttatatatatgcataacaaaacaatacctacctatgatag |
37597750 |
T |
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| Q |
207 |
tagtagcacctacacaatgaattttgtgatattgctggtaaca |
249 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37597751 |
tagtagcacctacacaatgaattttgtgatattgctggtaaca |
37597793 |
T |
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