View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0335-Insertion-7 (Length: 424)
Name: NF0335-Insertion-7
Description: NF0335
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0335-Insertion-7 |
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Alignment Details
Target: chr2 (Bit Score: 286; Significance: 1e-160; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 29 - 338
Target Start/End: Original strand, 35194483 - 35194792
Alignment:
| Q |
29 |
ttatgttaagtccctaactagtaacactaaattccaacacagacaaattagttacatatattgtttaacttacaagacatttgaaataatgtcgagatgt |
128 |
Q |
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|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
35194483 |
ttatgttaagtccctaactagttacactaaattccaacacagacaaattagttacatatattgtttaacttacaagacatttgaaataatgtcaagatgt |
35194582 |
T |
|
| Q |
129 |
tgtaacaactaagttgatctacaagacttcaatgtttccctctcgcttttgccctttaactctctcataggattgtcaaactgtggaatattgagtgaat |
228 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35194583 |
tgtaacacctaagttgatctacaagacttcaatgtttccctctcgcttttgccctttaactctctcataggattgtcaaactgtggaatattgagtgaat |
35194682 |
T |
|
| Q |
229 |
gattttgaagtgaggccgtaagtctttatttataggttacggtgctcacccttcgtatggcgagaagggtgatttagtcaataatttatccaaaatcata |
328 |
Q |
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|||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
35194683 |
gattttgaagtgaggccgtaagcctttctttataggttacggtgctcacccttcgtatggcgagaagggtgatttagtcaataatttatccgaaatcata |
35194782 |
T |
|
| Q |
329 |
catctaaatc |
338 |
Q |
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|||||||||| |
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| T |
35194783 |
catctaaatc |
35194792 |
T |
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