View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0335-Insertion-8 (Length: 354)
Name: NF0335-Insertion-8
Description: NF0335
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0335-Insertion-8 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 333; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 333; E-Value: 0
Query Start/End: Original strand, 6 - 354
Target Start/End: Original strand, 34758433 - 34758781
Alignment:
| Q |
6 |
caaacaaccaccacaaaagtagtaagattaatcatggcaaatacacttgcggttattttgtcttaaaatagtagttttatgattggaaatatgtgttaaa |
105 |
Q |
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| T |
34758433 |
caaacaaccaccacaaaagtagtaagattaatcatggcaaatacacttgtggttattttgtcttaaaatagtagttttatgattggaaatatgtgttaga |
34758532 |
T |
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| Q |
106 |
aaaggcttcacagtaatttaaattgttattttgaactgcttgttcaacattctttttagtattattattggatgaaagtagaaattagaaaaataaacat |
205 |
Q |
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| T |
34758533 |
aaaggcttcacagtaatttaaattgttactttgaactgcttgttcaacattctttttagtattattattggatgaaagtagaaattagaaaaataaacat |
34758632 |
T |
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| Q |
206 |
catggttattggtgaagttcagcttttgagtatgaagaaaccatatacagtaagaccagcataaaagttaggcgtgaaccactgctttaaaaaagaaaca |
305 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
34758633 |
catggttattggtgaagttcagcttttgagtatgaagaaaccatatacagtaagaccagcataaaagttaagcgtgaaccactgctttaaaaaagaaaca |
34758732 |
T |
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| Q |
306 |
gaaaggacataaataaagtaaactccactaaggtcccccaccaaaaaat |
354 |
Q |
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| T |
34758733 |
gaaaggacataaataaagtaaactccactaaggtcccccaccaaaaaat |
34758781 |
T |
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