View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0337_low_10 (Length: 293)
Name: NF0337_low_10
Description: NF0337
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0337_low_10 |
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Alignment Details
Target: chr8 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 6 - 119
Target Start/End: Original strand, 35535057 - 35535170
Alignment:
| Q |
6 |
agcagcagagagcaacaaaacacttgcaagccattttttaagcttcatcacatccaattatcacctaaaccagcaagttcagtccaatacttctgcaagg |
105 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
35535057 |
agcagcagtgagcaacaaaacacttgcaagccattttttaagcttcatcacatccaataatcacctaaaccagcaagttcagtccaatacttctgcaagg |
35535156 |
T |
|
| Q |
106 |
taaagccctaactg |
119 |
Q |
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|||||||||||||| |
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| T |
35535157 |
taaagccctaactg |
35535170 |
T |
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