View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0337_low_20 (Length: 201)
Name: NF0337_low_20
Description: NF0337
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0337_low_20 |
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Alignment Details
Target: chr7 (Bit Score: 89; Significance: 4e-43; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 69 - 177
Target Start/End: Original strand, 33267846 - 33267954
Alignment:
| Q |
69 |
gtgagatgaagatcagacgactcatattatgatatgtaatttaaaataaaattaataaattaagaattagagttgttcgatctatatccaacggtagaga |
168 |
Q |
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| T |
33267846 |
gtgagatgaagatcagacgactcatattatgatatgtactttaaagtaaaattaataaagtaagaattagagttgttcgatctttattcaacggtagaga |
33267945 |
T |
|
| Q |
169 |
taccttgat |
177 |
Q |
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||||||||| |
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| T |
33267946 |
taccttgat |
33267954 |
T |
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