View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0337_low_21 (Length: 201)
Name: NF0337_low_21
Description: NF0337
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0337_low_21 |
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Alignment Details
Target: chr8 (Bit Score: 180; Significance: 2e-97; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 41135533 - 41135346
Alignment:
| Q |
1 |
tttcttcctactatacttaccactgcgtttgagcctcgaacggtagtgccgctgagcaaactcaacactttgcatttcaatctctttttctgactccttc |
100 |
Q |
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|||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41135533 |
tttcttcctactatacttaccactgcgtttgagcttcgaacggtagtgctgctgagcaaactcaacactttgcatttcaatctctttttctgactccttc |
41135434 |
T |
|
| Q |
101 |
cacaaaactggttctttctcctccctactactttcatttctttcatctaacacactactcttgcccctaccaatggtcaaatgccttc |
188 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41135433 |
cacaaaactggttctttctcctccctactactttcatttctttcatctaacacactactcttgcccctaccaatggtcaaatgccttc |
41135346 |
T |
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