View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0341_low_6 (Length: 248)
Name: NF0341_low_6
Description: NF0341
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0341_low_6 |
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Alignment Details
Target: chr8 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 38439983 - 38440209
Alignment:
| Q |
1 |
tataattgaaatcgacaatcataataatcttattaaatcggatgttctcttgtgtat----taatatgatacgatcatttcgatatttaaatctttatgt |
96 |
Q |
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| T |
38439983 |
tataattgaaatcgacaatcataataatcttattaaatcggatgttctcttgtgtatggactaatatgatacgatcatttcgatatttaaatctttatgt |
38440082 |
T |
|
| Q |
97 |
aattaagacttaaattgttcaatccatacgatcttaagattaaattgatgtttcaccaagaatttagatgatatatagtaatatcaattcatatttgttt |
196 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
38440083 |
aattaagacttaaattgttcaatccatacgatcttaagattaaattgatgtttcaccatgaatttagatgatatatagtaatatcaattcatatttgttt |
38440182 |
T |
|
| Q |
197 |
tcttccatatttgttgttggtgttatt |
223 |
Q |
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|||||| |||||||||||||||||||| |
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| T |
38440183 |
tcttccttatttgttgttggtgttatt |
38440209 |
T |
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