View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0342_1D_high_2 (Length: 460)

Name: NF0342_1D_high_2
Description: NF0342_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0342_1D_high_2
NF0342_1D_high_2
[»] chr2 (14 HSPs)
chr2 (318-454)||(28652634-28652770)
chr2 (325-418)||(149625-149718)
chr2 (325-418)||(1383771-1383864)
chr2 (343-418)||(23801351-23801426)
chr2 (316-411)||(25184020-25184115)
chr2 (355-418)||(45535796-45535859)
chr2 (326-383)||(14183620-14183677)
chr2 (325-406)||(19647074-19647155)
chr2 (327-411)||(14179854-14179938)
chr2 (355-411)||(45535666-45535722)
chr2 (355-418)||(12626551-12626614)
chr2 (325-411)||(21915464-21915550)
chr2 (325-414)||(28345159-28345248)
chr2 (354-406)||(18388368-18388420)
[»] chr6 (6 HSPs)
chr6 (318-449)||(25601414-25601545)
chr6 (325-418)||(29045104-29045197)
chr6 (316-411)||(25921833-25921927)
chr6 (317-373)||(12942963-12943019)
chr6 (325-418)||(35057384-35057477)
chr6 (317-373)||(28288669-28288725)
[»] scaffold0125 (1 HSPs)
scaffold0125 (329-449)||(28396-28516)
[»] chr7 (15 HSPs)
chr7 (316-418)||(13315200-13315302)
chr7 (326-418)||(19282887-19282979)
chr7 (326-418)||(47975010-47975102)
chr7 (325-418)||(12754784-12754877)
chr7 (325-410)||(38295442-38295527)
chr7 (325-418)||(708640-708733)
chr7 (316-411)||(16550128-16550223)
chr7 (316-411)||(16615439-16615534)
chr7 (348-418)||(14274086-14274156)
chr7 (327-411)||(32160326-32160410)
chr7 (325-411)||(19195032-19195118)
chr7 (354-411)||(48274353-48274410)
chr7 (317-373)||(16108021-16108077)
chr7 (317-373)||(23664285-23664341)
chr7 (354-418)||(37539317-37539381)
[»] chr1 (14 HSPs)
chr1 (310-419)||(22145787-22145896)
chr1 (316-418)||(17901921-17902023)
chr1 (328-418)||(21239162-21239252)
chr1 (325-418)||(8306444-8306537)
chr1 (325-418)||(6834006-6834102)
chr1 (331-418)||(35894945-35895032)
chr1 (348-418)||(7052132-7052202)
chr1 (325-418)||(24723579-24723672)
chr1 (341-411)||(21243863-21243933)
chr1 (355-418)||(21188152-21188215)
chr1 (316-411)||(46197871-46197966)
chr1 (355-418)||(44822249-44822312)
chr1 (317-410)||(38056800-38056893)
chr1 (381-454)||(40390047-40390120)
[»] scaffold0594 (1 HSPs)
scaffold0594 (325-418)||(2080-2173)
[»] chr3 (12 HSPs)
chr3 (325-454)||(50350900-50351029)
chr3 (325-418)||(6805046-6805139)
chr3 (335-407)||(12917443-12917515)
chr3 (317-418)||(45803456-45803557)
chr3 (355-411)||(13522474-13522530)
chr3 (325-418)||(48631172-48631265)
chr3 (264-300)||(24177969-24178005)
chr3 (317-373)||(54521596-54521652)
chr3 (355-418)||(3160745-3160808)
chr3 (326-411)||(16979753-16979838)
chr3 (317-373)||(3803647-3803703)
chr3 (317-373)||(12305896-12305952)
[»] scaffold0148 (1 HSPs)
scaffold0148 (325-418)||(8681-8774)
[»] chr5 (8 HSPs)
chr5 (325-454)||(21398882-21399010)
chr5 (325-418)||(36508862-36508955)
chr5 (325-418)||(21503979-21504072)
chr5 (372-412)||(31621859-31621899)
chr5 (316-411)||(17011559-17011654)
chr5 (355-418)||(17875927-17875990)
chr5 (325-411)||(265878-265964)
chr5 (327-411)||(29448682-29448766)
[»] scaffold0004 (1 HSPs)
scaffold0004 (325-411)||(66205-66290)
[»] scaffold0149 (1 HSPs)
scaffold0149 (325-418)||(21380-21473)
[»] chr4 (16 HSPs)
chr4 (325-418)||(16296711-16296804)
chr4 (325-418)||(14549490-14549583)
chr4 (325-418)||(19434778-19434871)
chr4 (325-418)||(35660728-35660821)
chr4 (325-454)||(26921591-26921715)
chr4 (316-411)||(10694371-10694466)
chr4 (355-418)||(14477502-14477565)
chr4 (381-448)||(15239905-15239972)
chr4 (381-454)||(20150722-20150795)
chr4 (358-418)||(18462896-18462956)
chr4 (355-418)||(9622357-9622420)
chr4 (348-411)||(54798029-54798092)
chr4 (317-410)||(9638841-9638934)
chr4 (381-453)||(3838027-3838099)
chr4 (317-373)||(36038644-36038700)
chr4 (317-373)||(49547106-49547162)
[»] scaffold0261 (1 HSPs)
scaffold0261 (325-454)||(6501-6627)
[»] scaffold0676 (1 HSPs)
scaffold0676 (325-418)||(2654-2747)
[»] scaffold0026 (2 HSPs)
scaffold0026 (325-418)||(21962-22055)
scaffold0026 (372-418)||(9912-9958)
[»] scaffold0730 (1 HSPs)
scaffold0730 (325-418)||(6623-6716)
[»] scaffold0139 (1 HSPs)
scaffold0139 (316-387)||(23377-23446)
[»] scaffold0021 (2 HSPs)
scaffold0021 (355-418)||(16977-17040)
scaffold0021 (355-418)||(26508-26571)
[»] chr8 (12 HSPs)
chr8 (316-411)||(12037290-12037385)
chr8 (355-418)||(20879343-20879406)
chr8 (355-411)||(21676717-21676773)
chr8 (316-411)||(25657640-25657735)
chr8 (381-454)||(21697542-21697615)
chr8 (325-418)||(22483620-22483713)
chr8 (316-411)||(16198667-16198762)
chr8 (355-418)||(20517175-20517238)
chr8 (355-418)||(22344993-22345056)
chr8 (355-418)||(22356653-22356716)
chr8 (355-418)||(22610385-22610448)
chr8 (264-297)||(15113345-15113378)
[»] scaffold0439 (1 HSPs)
scaffold0439 (348-411)||(12104-12167)
[»] scaffold0046 (1 HSPs)
scaffold0046 (316-411)||(21903-21998)
[»] scaffold0061 (2 HSPs)
scaffold0061 (317-411)||(14712-14806)
scaffold0061 (317-411)||(23770-23864)
[»] scaffold0120 (1 HSPs)
scaffold0120 (381-454)||(29208-29281)
[»] scaffold0217 (1 HSPs)
scaffold0217 (354-418)||(28583-28647)
[»] scaffold0113 (1 HSPs)
scaffold0113 (325-417)||(35332-35424)
[»] scaffold0007 (2 HSPs)
scaffold0007 (357-417)||(18825-18885)
scaffold0007 (354-417)||(16542-16605)
[»] scaffold0555 (1 HSPs)
scaffold0555 (355-418)||(8916-8979)
[»] scaffold0256 (1 HSPs)
scaffold0256 (348-407)||(1971-2030)
[»] scaffold0138 (1 HSPs)
scaffold0138 (316-411)||(20928-21023)
[»] scaffold0058 (1 HSPs)
scaffold0058 (355-418)||(59774-59837)
[»] scaffold0057 (1 HSPs)
scaffold0057 (316-411)||(69979-70074)
[»] scaffold0034 (1 HSPs)
scaffold0034 (316-411)||(29342-29437)
[»] scaffold0017 (2 HSPs)
scaffold0017 (407-454)||(26650-26697)
scaffold0017 (348-418)||(23476-23546)
[»] scaffold0040 (1 HSPs)
scaffold0040 (325-418)||(106280-106373)
[»] scaffold1800 (1 HSPs)
scaffold1800 (325-418)||(446-541)
[»] scaffold0436 (1 HSPs)
scaffold0436 (327-411)||(8802-8886)


Alignment Details
Target: chr2 (Bit Score: 97; Significance: 2e-47; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 318 - 454
Target Start/End: Complemental strand, 28652770 - 28652634
Alignment:
Q  318 ccctaaccccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaa 417  Q
    |||||| |||||||||||||||||||||||||||| |||||||||| | ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  28652770 ccctaagcccaaattttatagaaaactcttcctatgattattctactacctgaacatcaattattaccttaattcattggattacctactcttttaacaa 28652671  T
Q  418 ttgaactcaatctaaccataatctctataacaccaaa 454  Q
    || || ||||||||||| |||| ||||||||| ||||    
T  28652670 ttaaattcaatctaaccctaatttctataacatcaaa 28652634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 325 - 418
Target Start/End: Complemental strand, 149718 - 149625
Alignment:
Q  325 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 418  Q
    ||||||||| |||| |||||   ||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  149718 cccaaatttgataggaaacttaacctatgattattcaacaatctgaacaccaattattaccttaattcatcggattacctactctttcaacaat 149625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 325 - 418
Target Start/End: Complemental strand, 1383864 - 1383771
Alignment:
Q  325 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 418  Q
    ||||||||| |||| |||||   ||||| |||||||||||| ||||| |||||||||||| ||||||||| |||||||||||||||| ||||||    
T  1383864 cccaaatttgataggaaacttaacctatgattattctacaacctgaagaccaattattacgttaattcatcggattacctactctttcaacaat 1383771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 343 - 418
Target Start/End: Original strand, 23801351 - 23801426
Alignment:
Q  343 ctcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 418  Q
    |||| ||||| |||||||||||| |||||||||| ||||||||||||||||| || ||||||||||||| ||||||    
T  23801351 ctctacctattattattctacaacctgaacaccagttattaccttaattcatcgggttacctactctttcaacaat 23801426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 316 - 411
Target Start/End: Original strand, 25184020 - 25184115
Alignment:
Q  316 aaccctaaccccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttt 411  Q
    ||||| || ||||||||| |||| ||||||  |||||  |||||||||| |||||||  ||||| |||  ||||||||||| ||||||||||||||    
T  25184020 aacccaaatcccaaatttgataggaaactcaacctatgtttattctacagtctgaacttcaattcttatgttaattcattgaattacctactcttt 25184115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 355 - 418
Target Start/End: Original strand, 45535796 - 45535859
Alignment:
Q  355 ttattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 418  Q
    ||||||||||| ||||||| ||||| |||  ||||||||||||||||||||| |||| ||||||    
T  45535796 ttattctacaacctgaacatcaatttttatgttaattcattggattacctacactttcaacaat 45535859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 326 - 383
Target Start/End: Complemental strand, 14183677 - 14183620
Alignment:
Q  326 ccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattatta 383  Q
    |||||||| |||| ||||||| ||||| ||||||| |||| |||||||||||||||||    
T  14183677 ccaaatttgataggaaactctacctatgattattccacaacctgaacaccaattatta 14183620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 325 - 406
Target Start/End: Original strand, 19647074 - 19647155
Alignment:
Q  325 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctac 406  Q
    ||||||||| |||| ||||  | |||||  ||||||||||| ||||||| ||||| |||  |||||||||||||||||||||    
T  19647074 cccaaatttgataggaaacattacctattgttattctacaacctgaacatcaattcttatgttaattcattggattacctac 19647155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 411
Target Start/End: Complemental strand, 14179938 - 14179854
Alignment:
Q  327 caaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttt 411  Q
    ||||||| |||| |||| || ||||| ||||||| |||| ||||||||||||||||| | || |||||  ||||| |||||||||    
T  14179938 caaatttgataggaaacactacctatgattattccacaacctgaacaccaattattaacctagttcatcagattatctactcttt 14179854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 355 - 411
Target Start/End: Original strand, 45535666 - 45535722
Alignment:
Q  355 ttattctacaatctgaacaccaattattaccttaattcattggattacctactcttt 411  Q
    ||||||||||| ||||||| ||||| |||  ||||||||||||||||||||| ||||    
T  45535666 ttattctacaacctgaacatcaatttttatgttaattcattggattacctacacttt 45535722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 355 - 418
Target Start/End: Complemental strand, 12626614 - 12626551
Alignment:
Q  355 ttattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 418  Q
    ||||||||||| ||||||| ||||| ||   ||||||||| |||||||||||||||| ||||||    
T  12626614 ttattctacaacctgaacatcaattcttctgttaattcatcggattacctactctttcaacaat 12626551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 411
Target Start/End: Original strand, 21915464 - 21915550
Alignment:
Q  325 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttt 411  Q
    |||||||||||||| ||||||  |||||  ||||||||||  ||||||  ||||| |||  ||||||||||| |||||||| |||||    
T  21915464 cccaaattttataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcattgaattacctattcttt 21915550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 414
Target Start/End: Complemental strand, 28345248 - 28345159
Alignment:
Q  325 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaa 414  Q
    ||||||||| |||| |||||   ||||| |||||||||||| || || | ||||| | ||| | |||||||||||||||||| |||||||    
T  28345248 cccaaatttgataggaaacttaacctatgattattctacaacctcaataacaattttcaccatgattcattggattacctacacttttaa 28345159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 406
Target Start/End: Complemental strand, 18388420 - 18388368
Alignment:
Q  354 attattctacaatctgaacaccaattattaccttaattcattggattacctac 406  Q
    |||| ||||||| ||||||| ||||| |||  |||||||||||||||||||||    
T  18388420 attactctacaacctgaacatcaatttttatattaattcattggattacctac 18388368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 84; Significance: 1e-39; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 318 - 449
Target Start/End: Complemental strand, 25601545 - 25601414
Alignment:
Q  318 ccctaaccccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaa 417  Q
    |||||| |||||||||||||||||| ||||||||| |||||| |||||  |||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  25601545 ccctaagcccaaattttatagaaaattcttcctatgattattatacaacatgaacatcaattattaccttaattctttggattacctactcttttaacaa 25601446  T
Q  418 ttgaactcaatctaaccataatctctataaca 449  Q
    || || ||||||||||| |||| |||||||||    
T  25601445 ttaaattcaatctaaccctaatttctataaca 25601414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 325 - 418
Target Start/End: Original strand, 29045104 - 29045197
Alignment:
Q  325 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 418  Q
    ||||||||| |||||||||||| ||||| |||||||||||| ||||||| |||||||||||||| ||||| |||||||||||||||| ||||||    
T  29045104 cccaaatttgatagaaaactctacctatgattattctacaacctgaacatcaattattaccttagttcatcggattacctactctttcaacaat 29045197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 316 - 411
Target Start/End: Original strand, 25921833 - 25921927
Alignment:
Q  316 aaccctaaccccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttt 411  Q
    ||||||||||| |||||| |||||||||| ||||||| |||||||||||| |||||||||||| |||||||||||||||  |||||  ||||||||    
T  25921833 aaccctaacccaaaattt-atagaaaacttttcctatgattattctacaacctgaacaccaatcattaccttaattcatcagattatttactcttt 25921927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 317 - 373
Target Start/End: Original strand, 12942963 - 12943019
Alignment:
Q  317 accctaaccccaaattttatagaaaactcttcctataattattctacaatctgaaca 373  Q
    |||| |||||||||||| |||| ||||||  |||||| |||||||||||||||||||    
T  12942963 acccaaaccccaaatttgataggaaactcaacctatatttattctacaatctgaaca 12943019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 418
Target Start/End: Original strand, 35057384 - 35057477
Alignment:
Q  325 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 418  Q
    ||||||||| ||||||||||   | ||  |||||||||||| ||||| | ||||| | ||| | |||||||||||||||||| |||| ||||||    
T  35057384 cccaaatttgatagaaaacttaacttaagattattctacaacctgaataacaattttcaccatgattcattggattacctacactttcaacaat 35057477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 373
Target Start/End: Complemental strand, 28288725 - 28288669
Alignment:
Q  317 accctaaccccaaattttatagaaaactcttcctataattattctacaatctgaaca 373  Q
    |||| |||||||||||| |||| ||||||  |||||  |||||||||||||||||||    
T  28288725 acccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaaca 28288669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 69; Significance: 9e-31; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 329 - 449
Target Start/End: Original strand, 28396 - 28516
Alignment:
Q  329 aattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaattgaactcaat 428  Q
    ||||||||||||||||||||||||  ||||||||||| |||| || |||||  |||  ||||| ||||||||||||||||||||||||||| || |||||    
T  28396 aattttatagaaaactcttcctatgtttattctacaacctgaccatcaatttgtacactaattaattggattacctactcttttaacaattaaattcaat 28495  T
Q  429 ctaaccataatctctataaca 449  Q
    |||||| ||||||||||||||    
T  28496 ctaaccctaatctctataaca 28516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 1e-29; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 316 - 418
Target Start/End: Complemental strand, 13315302 - 13315200
Alignment:
Q  316 aaccctaaccccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaac 415  Q
    ||||| || ||||||||| |||||||||||| ||||| |||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||| |||    
T  13315302 aacccaaatcccaaatttgatagaaaactctacctatgattattctacaacctgaacaccaattatttccttaattcattgggttacctactctttcaac 13315203  T
Q  416 aat 418  Q
    |||    
T  13315202 aat 13315200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 326 - 418
Target Start/End: Original strand, 19282887 - 19282979
Alignment:
Q  326 ccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 418  Q
    |||||||| |||||||||||| ||||| |||||||||||| ||||| |||||||||||||||| ||||| |||||||||||||||| ||||||    
T  19282887 ccaaatttgatagaaaactctacctatgattattctacaacctgaagaccaattattaccttagttcatcggattacctactctttcaacaat 19282979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 326 - 418
Target Start/End: Complemental strand, 47975102 - 47975010
Alignment:
Q  326 ccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 418  Q
    |||||||| ||||||||||    |||| |||||||||||| |||||||||||||||||||||||||||| |||||||||| ||||| ||||||    
T  47975102 ccaaatttgatagaaaacttaatctatgattattctacaacctgaacaccaattattaccttaattcatcggattacctaatctttcaacaat 47975010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 325 - 418
Target Start/End: Complemental strand, 12754877 - 12754784
Alignment:
Q  325 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 418  Q
    ||||||||| |||| |||||   ||||| |||||||||||| |||||||||||||||||| |||||||||  ||||||||||||||| ||||||    
T  12754877 cccaaatttgataggaaacttaacctatgattattctacaacctgaacaccaattattactttaattcatcagattacctactctttcaacaat 12754784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 325 - 410
Target Start/End: Original strand, 38295442 - 38295527
Alignment:
Q  325 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactctt 410  Q
    ||||||||  |||| ||||||| ||||| |||||||||||  |||||||||||||||||||||| ||||| |||||||||||||||    
T  38295442 cccaaattcaataggaaactctacctatgattattctacatcctgaacaccaattattaccttacttcatcggattacctactctt 38295527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 325 - 418
Target Start/End: Complemental strand, 708733 - 708640
Alignment:
Q  325 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 418  Q
    ||||||||| |||| |||||   ||||| |||||||||||| || ||||||||||||||||||||| |||   ||| |||||||||| ||||||    
T  708733 cccaaatttgataggaaacttaacctatgattattctacaacctaaacaccaattattaccttaatccatcatattgcctactctttcaacaat 708640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 316 - 411
Target Start/End: Complemental strand, 16550223 - 16550128
Alignment:
Q  316 aaccctaaccccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttt 411  Q
    ||||| || ||||||||| |||||||||||  |||||  ||||||||||  ||||||  ||||| |||  ||||||||||| ||||||||||||||    
T  16550223 aacccaaatcccaaatttgatagaaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcattgaattacctactcttt 16550128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 316 - 411
Target Start/End: Original strand, 16615439 - 16615534
Alignment:
Q  316 aaccctaaccccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttt 411  Q
    ||||| || ||||||||| |||||||||||  |||||  ||||||||||  ||||||  ||||| |||  ||||||||||| ||||||||||||||    
T  16615439 aacccaaatcccaaatttgatagaaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcattgaattacctactcttt 16615534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 418
Target Start/End: Original strand, 14274086 - 14274156
Alignment:
Q  348 cctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 418  Q
    ||||| |||||||||||| ||||||| |||||  ||  ||||||||||||||||||||| |||| ||||||    
T  14274086 cctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaat 14274156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 411
Target Start/End: Complemental strand, 32160410 - 32160326
Alignment:
Q  327 caaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttt 411  Q
    ||||||| |||| ||||||  |||||  ||||||||||  ||||||  ||||| |||  ||||||||||||||||||||||||||    
T  32160410 caaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcattggattacctactcttt 32160326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 411
Target Start/End: Original strand, 19195032 - 19195118
Alignment:
Q  325 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttt 411  Q
    ||||||||| |||| |||||   ||||| |||||||||||||||||| | ||||| | ||| | |||||||||||||| ||| ||||    
T  19195032 cccaaatttgataggaaacttaacctatgattattctacaatctgaataacaattctcaccatgattcattggattacatacacttt 19195118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 411
Target Start/End: Original strand, 48274353 - 48274410
Alignment:
Q  354 attattctacaatctgaacaccaattattaccttaattcattggattacctactcttt 411  Q
    ||||||||||||  ||||||||| ||||||| |||||||||  ||||| |||||||||    
T  48274353 attattctacaacatgaacaccacttattactttaattcatcagattatctactcttt 48274410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 373
Target Start/End: Complemental strand, 16108077 - 16108021
Alignment:
Q  317 accctaaccccaaattttatagaaaactcttcctataattattctacaatctgaaca 373  Q
    |||| |||||||||||| |||| ||||||  |||||  |||||||||||||||||||    
T  16108077 acccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaaca 16108021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 373
Target Start/End: Complemental strand, 23664341 - 23664285
Alignment:
Q  317 accctaaccccaaattttatagaaaactcttcctataattattctacaatctgaaca 373  Q
    |||| |||||||||||| |||| ||||||  |||||  |||||||||||||||||||    
T  23664341 acccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaaca 23664285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 418
Target Start/End: Original strand, 37539317 - 37539381
Alignment:
Q  354 attattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 418  Q
    |||||||||||| ||||| | ||||| | ||| | |||||||||||||||||| |||| ||||||    
T  37539317 attattctacaacctgaataacaattttcaccatgattcattggattacctacactttcaacaat 37539381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 5e-29; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 310 - 419
Target Start/End: Complemental strand, 22145896 - 22145787
Alignment:
Q  310 tcataaaaccctaaccccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactct 409  Q
    ||||| ||||||||||||||||||| ||||||||||| ||||| |||| |||||||  |||||| |||||||||| |||||||||||||||||||||||     
T  22145896 tcatacaaccctaaccccaaattttgtagaaaactctacctatgattaatctacaacttgaacatcaattattactttaattcattggattacctactcc 22145797  T
Q  410 tttaacaatt 419  Q
    || |||||||    
T  22145796 ttcaacaatt 22145787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 316 - 418
Target Start/End: Complemental strand, 17902023 - 17901921
Alignment:
Q  316 aaccctaaccccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaac 415  Q
    ||||| || ||||||||| |||||||||||| ||||| |||||||||||| |||||||||||||||||||||| ||||| |||||| ||||||||| |||    
T  17902023 aacccaaatcccaaatttgatagaaaactctacctatgattattctacaacctgaacaccaattattaccttagttcatcggattatctactctttcaac 17901924  T
Q  416 aat 418  Q
    |||    
T  17901923 aat 17901921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 328 - 418
Target Start/End: Complemental strand, 21239252 - 21239162
Alignment:
Q  328 aaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 418  Q
    |||||| |||||||||||| ||||| |||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||| ||||||    
T  21239252 aaatttgatagaaaactctacctatgattattctacaaactgaacaccaattattaccttagttcatcggattacctactctttcaacaat 21239162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 325 - 418
Target Start/End: Original strand, 8306444 - 8306537
Alignment:
Q  325 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 418  Q
    ||||||||| |||| |||||   ||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  8306444 cccaaatttgataggaaacttaacctatgattattcaacaatctgaacaccaattattaccttaattcatcggattacctactctttcaacaat 8306537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 325 - 418
Target Start/End: Original strand, 6834006 - 6834102
Alignment:
Q  325 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaat---tcattggattacctactcttttaacaat 418  Q
    ||||||||| |||||||||||| ||||| |||||||||||| |||||||||||||||||||||| |   |||| |||||||||||||||| ||||||    
T  6834006 cccaaatttgatagaaaactctacctatgattattctacaacctgaacaccaattattaccttagttcatcatcggattacctactctttcaacaat 6834102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 331 - 418
Target Start/End: Original strand, 35894945 - 35895032
Alignment:
Q  331 ttttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 418  Q
    |||||||||||||||||| ||| ||||||| || | |||||||||||||||||||||| ||||| |||||||| | ||||| ||||||    
T  35894945 ttttatagaaaactcttcatatgattattccaccacctgaacaccaattattaccttacttcatcggattaccaattctttcaacaat 35895032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 348 - 418
Target Start/End: Complemental strand, 7052202 - 7052132
Alignment:
Q  348 cctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 418  Q
    ||||| |||||| ||||| ||||||||||||||||||||||||||||  ||||||||||||||| ||||||    
T  7052202 cctatgattattttacaacctgaacaccaattattaccttaattcatcagattacctactctttcaacaat 7052132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 325 - 418
Target Start/End: Complemental strand, 24723672 - 24723579
Alignment:
Q  325 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 418  Q
    ||||||||| |||| |||||   ||||| |||||||||||| ||||||||||||||||||||||||||||   ||||| |||||||| ||||||    
T  24723672 cccaaatttgataggaaacttaacctatgattattctacaacctgaacaccaattattaccttaattcatcatattacatactctttcaacaat 24723579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 341 - 411
Target Start/End: Complemental strand, 21243933 - 21243863
Alignment:
Q  341 aactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttt 411  Q
    |||||| ||||| |||||||||||| ||||||||||||||||| | |||||||| |||||| |||||||||    
T  21243933 aactctgcctatgattattctacaacctgaacaccaattattaacctaattcatcggattatctactcttt 21243863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 355 - 418
Target Start/End: Complemental strand, 21188215 - 21188152
Alignment:
Q  355 ttattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 418  Q
    ||||||||||| ||||||| ||||| |||  ||||||||||||||||||||| |||| ||||||    
T  21188215 ttattctacaacctgaacatcaatttttatattaattcattggattacctacactttcaacaat 21188152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 316 - 411
Target Start/End: Complemental strand, 46197966 - 46197871
Alignment:
Q  316 aaccctaaccccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttt 411  Q
    ||||| || ||||||||| |||| ||||||  |||||  ||||||||||  ||||||  ||||| |||  ||||||||||||||||||||||||||    
T  46197966 aacccaaatcccaaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcattggattacctactcttt 46197871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 355 - 418
Target Start/End: Complemental strand, 44822312 - 44822249
Alignment:
Q  355 ttattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 418  Q
    ||||||||||| ||||||| |||||  ||  ||||||||||||||||||||| |||| ||||||    
T  44822312 ttattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaat 44822249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 410
Target Start/End: Complemental strand, 38056893 - 38056800
Alignment:
Q  317 accctaaccccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactctt 410  Q
    |||| |||||||||||| |||| |||||   ||||| |||| ||| |||  || ||||||||||||||| ||||||||  ||||| ||||||||    
T  38056893 acccaaaccccaaatttgataggaaacttaacctatgattaatctgcaacttggacaccaattattaccctaattcatcagattatctactctt 38056800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 454
Target Start/End: Original strand, 40390047 - 40390120
Alignment:
Q  381 ttaccttaattcattggattacctactcttttaacaattgaactcaatctaaccataatctctataacaccaaa 454  Q
    |||| |||||||| ||| ||||||||||||| ||||||| || ||||| ||||| |||| ||| ||||| ||||    
T  40390047 ttacgttaattcaatggtttacctactctttcaacaattaaattcaatataaccctaatatctttaacatcaaa 40390120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 325 - 418
Target Start/End: Original strand, 2080 - 2173
Alignment:
Q  325 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 418  Q
    ||||||||| |||||||| ||| ||||| |||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||| ||||||    
T  2080 cccaaatttgatagaaaaatctacctatgattattctacaacctgaacaccaattattaccttagttcatcggattacctactctttcaacaat 2173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 1e-26; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 325 - 454
Target Start/End: Complemental strand, 50351029 - 50350900
Alignment:
Q  325 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaattgaact 424  Q
    ||||||||||||||||||||||||||||  ||||| ||||| ||||||| ||||   |||  ||  |||||||||||||||| |||||||||||| || |    
T  50351029 cccaaattttatagaaaactcttcctatgtttattatacaacctgaacatcaatctgtacactatgtcattggattacctacgcttttaacaattaaatt 50350930  T
Q  425 caatctaaccataatctctataacaccaaa 454  Q
    |||||||||| |||||||||||||| ||||    
T  50350929 caatctaaccctaatctctataacatcaaa 50350900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 325 - 418
Target Start/End: Complemental strand, 6805139 - 6805046
Alignment:
Q  325 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 418  Q
    ||||||||| ||||||||||   | ||| |||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||| ||||||    
T  6805139 cccaaatttgatagaaaacttaacatatgattattctacaacctgaacaccaattattaccttaattcatcagattacctactctttcaacaat 6805046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 335 - 407
Target Start/End: Complemental strand, 12917515 - 12917443
Alignment:
Q  335 atagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctact 407  Q
    |||| ||||||| ||||| |||||| ||||| |||||||||||||||||||||| ||||| ||||||||||||    
T  12917515 ataggaaactctacctatgattattttacaacctgaacaccaattattaccttacttcatcggattacctact 12917443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 317 - 418
Target Start/End: Complemental strand, 45803557 - 45803456
Alignment:
Q  317 accctaaccccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaaca 416  Q
    ||||||| ||||||||  |||| ||||||  |||||  ||||||||||| ||| ||| ||||| |||  ||||||||| |||||||||||||||| ||||    
T  45803557 accctaatcccaaattcaataggaaactcaacctatgtttattctacaacctggacatcaattcttatgttaattcatcggattacctactctttcaaca 45803458  T
Q  417 at 418  Q
    ||    
T  45803457 at 45803456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 355 - 411
Target Start/End: Complemental strand, 13522530 - 13522474
Alignment:
Q  355 ttattctacaatctgaacaccaattattaccttaattcattggattacctactcttt 411  Q
    ||||||||||| ||||||| ||||| |||  ||||||||||||||||||||||||||    
T  13522530 ttattctacaacctgaacatcaattcttatgttaattcattggattacctactcttt 13522474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 325 - 418
Target Start/End: Original strand, 48631172 - 48631265
Alignment:
Q  325 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 418  Q
    ||||||||| |||| ||||  | |||||  ||||||||||| ||||||| ||||| |||  ||||||||||| ||||||||| |||| ||||||    
T  48631172 cccaaatttgataggaaacattacctattgttattctacaacctgaacatcaattcttatgttaattcattgaattacctacactttcaacaat 48631265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 24178005 - 24177969
Alignment:
Q  264 atcatgaaaaacaatggaaaacaaaaacccttcacta 300  Q
    ||||||||||||||||||||| |||||||||||||||    
T  24178005 atcatgaaaaacaatggaaaataaaaacccttcacta 24177969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 317 - 373
Target Start/End: Original strand, 54521596 - 54521652
Alignment:
Q  317 accctaaccccaaattttatagaaaactcttcctataattattctacaatctgaaca 373  Q
    |||| |||||||||||| |||| ||||||  |||||| |||||||||||||||||||    
T  54521596 acccaaaccccaaatttgataggaaactcaacctatatttattctacaatctgaaca 54521652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 355 - 418
Target Start/End: Complemental strand, 3160808 - 3160745
Alignment:
Q  355 ttattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 418  Q
    ||||||||||| || |||| ||||| |||  ||||||||||| |||||||||||||| ||||||    
T  3160808 ttattctacaacctaaacatcaatttttatattaattcattgaattacctactctttcaacaat 3160745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 411
Target Start/End: Original strand, 16979753 - 16979838
Alignment:
Q  326 ccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttt 411  Q
    |||||||| |||| ||||||  |||||  ||||||||||  ||||||  ||||| |||  ||||||||||| ||||||||||||||    
T  16979753 ccaaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcattgaattacctactcttt 16979838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 373
Target Start/End: Original strand, 3803647 - 3803703
Alignment:
Q  317 accctaaccccaaattttatagaaaactcttcctataattattctacaatctgaaca 373  Q
    |||| |||||||||||| |||| ||||||  |||||  |||||||||||||||||||    
T  3803647 acccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaaca 3803703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 373
Target Start/End: Original strand, 12305896 - 12305952
Alignment:
Q  317 accctaaccccaaattttatagaaaactcttcctataattattctacaatctgaaca 373  Q
    |||| |||||||||||| |||| ||||||  |||||  |||||||||||||||||||    
T  12305896 acccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaaca 12305952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 325 - 418
Target Start/End: Original strand, 8681 - 8774
Alignment:
Q  325 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 418  Q
    ||||||||| |||||||||||| ||||| |||| ||| ||| ||||||||||||||||||||||||||||  ||||||||||||||| ||||||    
T  8681 cccaaatttgatagaaaactctacctatgattactctgcaacctgaacaccaattattaccttaattcatctgattacctactctttcaacaat 8774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 3e-24; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 325 - 454
Target Start/End: Complemental strand, 21399010 - 21398882
Alignment:
Q  325 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaattgaact 424  Q
    ||||||||||||||||||||||||||||  ||||||||||| ||||||| |||||  |||  ||||| ||| |||||||||||||||| |||||| || |    
T  21399010 cccaaattttatagaaaactcttcctatgtttattctacaacctgaacatcaatttgtacactaattaattagattacctactcttttgacaattaaatt 21398911  T
Q  425 caatctaaccataatctctataacaccaaa 454  Q
    |||||| ||| || ||||||||||| ||||    
T  21398910 caatct-accctattctctataacatcaaa 21398882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 325 - 418
Target Start/End: Complemental strand, 36508955 - 36508862
Alignment:
Q  325 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 418  Q
    ||||||||| |||| |||||   ||||| |||||||||||| || |||||||||||||||||||||||||  ||||||||||||||| ||||||    
T  36508955 cccaaatttgataggaaacttaacctatgattattctacaacctaaacaccaattattaccttaattcatcagattacctactctttcaacaat 36508862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 325 - 418
Target Start/End: Original strand, 21503979 - 21504072
Alignment:
Q  325 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 418  Q
    ||||||||  |||| ||||||  ||||| |||||||||||| ||||||| || || |||  |||||||||||||| ||||||||||| ||||||    
T  21503979 cccaaattcaataggaaactcaacctatgattattctacaacctgaacatcagttcttatgttaattcattggatcacctactctttcaacaat 21504072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 372 - 412
Target Start/End: Original strand, 31621859 - 31621899
Alignment:
Q  372 caccaattattaccttaattcattggattacctactctttt 412  Q
    ||||||||||||||||||||||| || ||||||||||||||    
T  31621859 caccaattattaccttaattcatcggtttacctactctttt 31621899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 316 - 411
Target Start/End: Original strand, 17011559 - 17011654
Alignment:
Q  316 aaccctaaccccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttt 411  Q
    ||||| || ||||||||| |||| ||||||  |||||  ||||||||||  ||||||  ||||| |||  ||||||||||| ||||||||||||||    
T  17011559 aacccaaatcccaaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcattgaattacctactcttt 17011654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 355 - 418
Target Start/End: Original strand, 17875927 - 17875990
Alignment:
Q  355 ttattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 418  Q
    ||||||||||| ||||||| |||||  ||  ||||||||||||||||||||| |||| ||||||    
T  17875927 ttattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaat 17875990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 411
Target Start/End: Original strand, 265878 - 265964
Alignment:
Q  325 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttt 411  Q
    ||||||||| |||| ||||||  |||||  ||||||||||  ||||||  ||||| |||  |||||||| |||||||||||||||||    
T  265878 cccaaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcactggattacctactcttt 265964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 411
Target Start/End: Original strand, 29448682 - 29448766
Alignment:
Q  327 caaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttt 411  Q
    ||||||| |||| ||||||  |||||  ||||||||||  ||||||  ||||| |||  |||||||||||| |||||||||||||    
T  29448682 caaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcattggtttacctactcttt 29448766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 325 - 411
Target Start/End: Complemental strand, 66290 - 66205
Alignment:
Q  325 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttt 411  Q
    ||||||||| ||||||| |||| ||||| |||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||    
T  66290 cccaaatttgatagaaa-ctctacctatgattattctacaacctgaacaccaattattaccttagttcatcggattacctactcttt 66205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 325 - 418
Target Start/End: Original strand, 21380 - 21473
Alignment:
Q  325 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 418  Q
    ||||||||| ||||||||||    |||| |||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||| ||||||    
T  21380 cccaaatttgatagaaaacttaaactatgattattctacaacctgaacaccaattattaccttaattcatcagattacctactctttcaacaat 21473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 8e-22; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 325 - 418
Target Start/End: Original strand, 16296711 - 16296804
Alignment:
Q  325 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 418  Q
    ||||||||| |||| |||||   ||||| ||||||| |||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  16296711 cccaaatttgataggaaacttaacctatgattattcaacaacctgaacaccaattattaccttaattcatcggattacctactctttcaacaat 16296804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 325 - 418
Target Start/End: Original strand, 14549490 - 14549583
Alignment:
Q  325 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 418  Q
    ||||||||| |||| |||||   | ||| |||||||||||| ||||||||||||||||||||||||||||  |||||| |||||||| ||||||    
T  14549490 cccaaatttgataggaaacttaacatatgattattctacaacctgaacaccaattattaccttaattcatcagattacatactctttcaacaat 14549583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 325 - 418
Target Start/End: Complemental strand, 19434871 - 19434778
Alignment:
Q  325 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 418  Q
    ||||||||| |||| |||||   ||||| |||||||||||| |||||||||||||||| | |||||||||  ||||||||||||||| ||||||    
T  19434871 cccaaatttgataggaaacttaacctatgattattctacaacctgaacaccaattatttctttaattcatcagattacctactctttcaacaat 19434778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 325 - 418
Target Start/End: Original strand, 35660728 - 35660821
Alignment:
Q  325 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 418  Q
    ||||||||| |||| |||||   | ||| |||||||||||| |||||||||||||||||||||| ||||| |||||||||||||| | ||||||    
T  35660728 cccaaatttgataggaaacttaacatatgattattctacaacctgaacaccaattattaccttacttcatcggattacctactctctcaacaat 35660821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 325 - 454
Target Start/End: Complemental strand, 26921715 - 26921591
Alignment:
Q  325 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaattgaact 424  Q
    |||||||||||||||||| |||||||||  |||||||||||  |||||| |||||  |||   ||||||||||||||||||||    |||||||| || |    
T  26921715 cccaaattttatagaaaa-tcttcctatgtttattctacaacatgaacatcaatttgtacacaaattcattggattacctact----taacaattaaatt 26921621  T
Q  425 caatctaaccataatctctataacaccaaa 454  Q
    |||||||||| |||||||||| ||| ||||    
T  26921620 caatctaaccctaatctctatgacatcaaa 26921591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 316 - 411
Target Start/End: Complemental strand, 10694466 - 10694371
Alignment:
Q  316 aaccctaaccccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttt 411  Q
    ||||| || ||||||||| |||| ||||||  |||||  ||||||||||  ||||||  ||||| |||  ||||||||||||||||||||||||||    
T  10694466 aacccaaatcccaaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcattggattacctactcttt 10694371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 355 - 418
Target Start/End: Original strand, 14477502 - 14477565
Alignment:
Q  355 ttattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 418  Q
    ||||||||||||||||||| |||||  ||  ||||||||||||||||||||| |||| ||||||    
T  14477502 ttattctacaatctgaacatcaatttctatgttaattcattggattacctacactttcaacaat 14477565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 381 - 448
Target Start/End: Complemental strand, 15239972 - 15239905
Alignment:
Q  381 ttaccttaattcattggattacctactcttttaacaattgaactcaatctaaccataatctctataac 448  Q
    |||| |||||||| ||| ||||||||| ||| ||||||| || ||||||||||| |||||||||||||    
T  15239972 ttacgttaattcaatggtttacctactttttcaacaattaaattcaatctaaccctaatctctataac 15239905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 381 - 454
Target Start/End: Original strand, 20150722 - 20150795
Alignment:
Q  381 ttaccttaattcattggattacctactcttttaacaattgaactcaatctaaccataatctctataacaccaaa 454  Q
    |||| |||||||| ||| ||||||||||||| ||||||| || ||||| ||||| |||||||| ||||| ||||    
T  20150722 ttacgttaattcaatggtttacctactctttcaacaattaaattcaatataaccctaatctctttaacatcaaa 20150795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 358 - 418
Target Start/End: Original strand, 18462896 - 18462956
Alignment:
Q  358 ttctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 418  Q
    |||||||||||||||| ||||| | |  ||||||||||||||||||||| |||| ||||||    
T  18462896 ttctacaatctgaacatcaattttcatgttaattcattggattacctacactttcaacaat 18462956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 355 - 418
Target Start/End: Original strand, 9622357 - 9622420
Alignment:
Q  355 ttattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 418  Q
    ||||||||||||||||||  || |  |||| |||||||| ||||||||||||||||| ||||||    
T  9622357 ttattctacaatctgaacctcattccttacgttaattcaatggattacctactctttcaacaat 9622420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 411
Target Start/End: Complemental strand, 54798092 - 54798029
Alignment:
Q  348 cctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttt 411  Q
    ||||| ||||||||||||| |||||||||  |||||| |||||||||  ||||| |||||||||    
T  54798092 cctatgattattctacaatatgaacaccacctattactttaattcatcagattatctactcttt 54798029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 410
Target Start/End: Original strand, 9638841 - 9638934
Alignment:
Q  317 accctaaccccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactctt 410  Q
    |||| |||||||||||| |||| |||||   ||||| |||| ||| |||  || ||||||||||||||| ||||||||  ||||| ||||||||    
T  9638841 acccaaaccccaaatttgataggaaacttaacctatgattaatctgcaacttggacaccaattattaccctaattcatcagattatctactctt 9638934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 381 - 453
Target Start/End: Original strand, 3838027 - 3838099
Alignment:
Q  381 ttaccttaattcattggattacctactcttttaacaattgaactcaatctaaccataatctctataacaccaa 453  Q
    |||| |||||||| ||| ||||||||||||| ||||||| || ||||| ||||| ||| |||| ||| |||||    
T  3838027 ttacgttaattcaatggtttacctactctttcaacaattaaattcaatataaccctaaactctttaaaaccaa 3838099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 373
Target Start/End: Original strand, 36038644 - 36038700
Alignment:
Q  317 accctaaccccaaattttatagaaaactcttcctataattattctacaatctgaaca 373  Q
    |||| |||||||||||| |||| ||||||  |||||  |||||||||||||||||||    
T  36038644 acccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaaca 36038700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 373
Target Start/End: Complemental strand, 49547162 - 49547106
Alignment:
Q  317 accctaaccccaaattttatagaaaactcttcctataattattctacaatctgaaca 373  Q
    |||| |||||||||||| |||| ||||||  |||||  |||||||||||||||||||    
T  49547162 acccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaaca 49547106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 325 - 454
Target Start/End: Complemental strand, 6627 - 6501
Alignment:
Q  325 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaattgaact 424  Q
    |||||||||||||||| ||||||||||||  | ||| |||| || |||| |||||  |||  |||||||| ||||||||||||| |||||||||| || |    
T  6627 cccaaattttatagaacactcttcctata--tcttcaacaaccttaacatcaatttgtacactaattcat-ggattacctactcctttaacaattcaatt 6531  T
Q  425 caatctaaccataatctctataacaccaaa 454  Q
    ||||||| ||||||||||||||||| ||||    
T  6530 caatctagccataatctctataacatcaaa 6501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 325 - 418
Target Start/End: Original strand, 2654 - 2747
Alignment:
Q  325 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 418  Q
    ||||||||| |||| |||||   | ||| ||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||    
T  2654 cccaaatttgataggaaacttaacgtatgattattcaacaatctgaacaccaattattaccttaattcatcagattacctactctttcaacaat 2747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 325 - 418
Target Start/End: Original strand, 21962 - 22055
Alignment:
Q  325 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 418  Q
    ||||||||| |||| |||||   ||||| |||||||||||| ||||||||||||| ||||||||||||||  ||||||||||||||| ||||||    
T  21962 cccaaatttgataggaaacttaacctatgattattctacaacctgaacaccaattcttaccttaattcatcagattacctactctttcaacaat 22055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 418
Target Start/End: Original strand, 9912 - 9958
Alignment:
Q  372 caccaattattaccttaattcattggattacctactcttttaacaat 418  Q
    |||||||||||||||||||||||  ||||||||||||||| ||||||    
T  9912 caccaattattaccttaattcatcagattacctactctttcaacaat 9958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0730 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0730
Description:

Target: scaffold0730; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 325 - 418
Target Start/End: Complemental strand, 6716 - 6623
Alignment:
Q  325 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 418  Q
    ||||||||| |||||||||||| | ||| |||| |||||||  ||||||| |||||||||||||||||||   |||||||||||||| ||||||    
T  6716 cccaaatttgatagaaaactctacttatgattactctacaacatgaacacgaattattaccttaattcatctaattacctactctttcaacaat 6623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 316 - 387
Target Start/End: Original strand, 23377 - 23446
Alignment:
Q  316 aaccctaaccccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattacctt 387  Q
    |||||| ||||||||||| |||| ||||||||||||| ||||||||||||| |||||| |||||||||||||    
T  23377 aacccttaccccaaattt-ataggaaactcttcctatgattattctacaatttgaaca-caattattacctt 23446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 355 - 418
Target Start/End: Original strand, 16977 - 17040
Alignment:
Q  355 ttattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 418  Q
    ||||||||||| ||||||| ||||| |||  |||||||||||||||||||||||||| ||||||    
T  16977 ttattctacaacctgaacatcaatttttatattaattcattggattacctactctttcaacaat 17040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 355 - 418
Target Start/End: Original strand, 26508 - 26571
Alignment:
Q  355 ttattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 418  Q
    ||||||||||| ||||||| ||||| |||  |||||||||||||||||||||||||| ||||||    
T  26508 ttattctacaacctgaacatcaatttttatattaattcattggattacctactctttcaacaat 26571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 316 - 411
Target Start/End: Complemental strand, 12037385 - 12037290
Alignment:
Q  316 aaccctaaccccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttt 411  Q
    ||||| || ||||||||| |||| |  |||| ||||| |||||||||||| || |||||||||||||| | |||||||| |||||| |||||||||    
T  12037385 aacccaaatcccaaatttgataggagtctctacctatgattattctacaacctaaacaccaattattaacctaattcatcggattatctactcttt 12037290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 355 - 418
Target Start/End: Original strand, 20879343 - 20879406
Alignment:
Q  355 ttattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 418  Q
    ||||||||||| ||||||| ||||| |||  ||||||||||||||||||||| |||||||||||    
T  20879343 ttattctacaacctgaacatcaattcttatgttaattcattggattacctacacttttaacaat 20879406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 355 - 411
Target Start/End: Complemental strand, 21676773 - 21676717
Alignment:
Q  355 ttattctacaatctgaacaccaattattaccttaattcattggattacctactcttt 411  Q
    ||||||||||| ||||||| ||||| |||  ||||||||||||||||||||||||||    
T  21676773 ttattctacaacctgaacatcaatttttatattaattcattggattacctactcttt 21676717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 316 - 411
Target Start/End: Complemental strand, 25657735 - 25657640
Alignment:
Q  316 aaccctaaccccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttt 411  Q
    ||||| || ||||||||| |||| ||||||  |||||  ||||||||||  ||||||| ||||| |||  ||||||||||| ||||||||||||||    
T  25657735 aacccaaatcccaaatttgataggaaactcaacctatgtttattctacagcctgaacatcaattcttatgttaattcattgaattacctactcttt 25657640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 381 - 454
Target Start/End: Complemental strand, 21697615 - 21697542
Alignment:
Q  381 ttaccttaattcattggattacctactcttttaacaattgaactcaatctaaccataatctctataacaccaaa 454  Q
    |||| |||||||| ||| ||||||||||||| ||||||| || ||||| ||||| |||||||| ||||| ||||    
T  21697615 ttacgttaattcaatggtttacctactctttcaacaattaaattcaatataaccctaatctctttaacatcaaa 21697542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 325 - 418
Target Start/End: Original strand, 22483620 - 22483713
Alignment:
Q  325 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 418  Q
    ||||||||  |||| ||||||  |||||  ||||||||||| ||||||| ||||| |||  |||||||||  ||||||||||||||| ||||||    
T  22483620 cccaaattcaataggaaactcaacctatgtttattctacaacctgaacatcaattcttatgttaattcatcagattacctactctttcaacaat 22483713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 316 - 411
Target Start/End: Original strand, 16198667 - 16198762
Alignment:
Q  316 aaccctaaccccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttt 411  Q
    ||||| || ||||||||| |||| ||||||  |||||  ||||||||||  ||||||  ||||| |||  ||||||||||| ||||||||||||||    
T  16198667 aacccaaatcccaaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcattgaattacctactcttt 16198762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 355 - 418
Target Start/End: Complemental strand, 20517238 - 20517175
Alignment:
Q  355 ttattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 418  Q
    ||||||||||| ||||||| | ||| |||  ||||||||||||||||||||| |||| ||||||    
T  20517238 ttattctacaacctgaacatcgatttttatattaattcattggattacctacactttcaacaat 20517175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 355 - 418
Target Start/End: Original strand, 22344993 - 22345056
Alignment:
Q  355 ttattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 418  Q
    ||||||||||| ||||||| | ||| |||  ||||||||||||||||||||| |||| ||||||    
T  22344993 ttattctacaacctgaacatcgatttttatattaattcattggattacctacactttcaacaat 22345056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 355 - 418
Target Start/End: Original strand, 22356653 - 22356716
Alignment:
Q  355 ttattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 418  Q
    ||||||||||| ||||||| | ||| |||  ||||||||||||||||||||| |||| ||||||    
T  22356653 ttattctacaacctgaacatcgatttttatattaattcattggattacctacactttcaacaat 22356716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 355 - 418
Target Start/End: Complemental strand, 22610448 - 22610385
Alignment:
Q  355 ttattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 418  Q
    ||||||||||||||||||  || |  |||| |||||||| ||||||||||||||||| ||||||    
T  22610448 ttattctacaatctgaacctcattccttacgttaattcaatggattacctactctttcaacaat 22610385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 297
Target Start/End: Original strand, 15113345 - 15113378
Alignment:
Q  264 atcatgaaaaacaatggaaaacaaaaacccttca 297  Q
    ||||||||||| ||||||||||||||||||||||    
T  15113345 atcatgaaaaataatggaaaacaaaaacccttca 15113378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 348 - 411
Target Start/End: Original strand, 12104 - 12167
Alignment:
Q  348 cctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttt 411  Q
    ||||| |||||||||||| ||||||| ||||| |||  |||||||||||| |||||||||||||    
T  12104 cctatgattattctacaacctgaacatcaattcttatgttaattcattgggttacctactcttt 12167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 316 - 411
Target Start/End: Complemental strand, 21998 - 21903
Alignment:
Q  316 aaccctaaccccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttt 411  Q
    ||||| || ||||||||| |||| ||||||  |||||  ||||||||||  ||||||| ||||| |||  ||||||||||| ||||||||||||||    
T  21998 aacccaaatcccaaatttgataggaaactcaacctatgtttattctacagcctgaacatcaattcttatgttaattcattgaattacctactcttt 21903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 411
Target Start/End: Complemental strand, 14806 - 14712
Alignment:
Q  317 accctaaccccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttt 411  Q
    |||| |||||||||||| |||| ||||||  |||||  ||||||||||| ||||||  ||||| |||  |||||| ||| |||||||||||||||    
T  14806 acccaaaccccaaatttgataggaaactcaacctatgtttattctacaacctgaacttcaattcttatgttaatttattagattacctactcttt 14712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 411
Target Start/End: Complemental strand, 23864 - 23770
Alignment:
Q  317 accctaaccccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttt 411  Q
    |||| |||||||||||| |||| ||||||  |||||  ||||||||||| ||||||  ||||| |||  |||||| ||| |||||||||||||||    
T  23864 acccaaaccccaaatttgataggaaactcaacctatgtttattctacaacctgaacttcaattcttatgttaatttattagattacctactcttt 23770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 381 - 454
Target Start/End: Original strand, 29208 - 29281
Alignment:
Q  381 ttaccttaattcattggattacctactcttttaacaattgaactcaatctaaccataatctctataacaccaaa 454  Q
    |||| |||||||| ||| ||||||||||||| ||||||| || ||||| ||||| |||||||| ||||| ||||    
T  29208 ttacgttaattcaatggtttacctactctttcaacaattaaattcaatataaccttaatctctttaacatcaaa 29281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 354 - 418
Target Start/End: Original strand, 28583 - 28647
Alignment:
Q  354 attattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 418  Q
    |||||||||||| ||||||| ||||| |||  |||||||||| |||||||||| |||| ||||||    
T  28583 attattctacaacctgaacatcaatttttatgttaattcattagattacctacactttcaacaat 28647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 325 - 417
Target Start/End: Original strand, 35332 - 35424
Alignment:
Q  325 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaa 417  Q
    ||||||||  |||| ||||||  |||||  ||||||||||| ||||||| ||||| |||  |||||| |||||||||| ||| ||||||||||    
T  35332 cccaaattcaataggaaactcaacctatgtttattctacaacctgaacatcaattcttatgttaatttattggattacatacacttttaacaa 35424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 357 - 417
Target Start/End: Complemental strand, 18885 - 18825
Alignment:
Q  357 attctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaa 417  Q
    ||||| ||| || |||||||||||||||| |||||||||  |||||||||||||| |||||    
T  18885 attctccaacctaaacaccaattattaccctaattcattatattacctactctttcaacaa 18825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 417
Target Start/End: Complemental strand, 16605 - 16542
Alignment:
Q  354 attattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaa 417  Q
    |||||||| ||| || |||||||||||||||| ||||||||   |||||||||||||| |||||    
T  16605 attattctgcaacctaaacaccaattattaccctaattcatcatattacctactctttcaacaa 16542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 355 - 418
Target Start/End: Complemental strand, 8979 - 8916
Alignment:
Q  355 ttattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 418  Q
    ||||||||||| ||||||| ||||| |||| |||||||||| || |||||||||| | ||||||    
T  8979 ttattctacaacctgaacatcaattcttacgttaattcattcgactacctactctctcaacaat 8916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 407
Target Start/End: Complemental strand, 2030 - 1971
Alignment:
Q  348 cctataattattctacaatctgaacaccaattattaccttaattcattggattacctact 407  Q
    ||||| ||||||||||||  ||||||||| |||||||||||||||||  ||||| |||||    
T  2030 cctatgattattctacaacatgaacaccacttattaccttaattcatcagattatctact 1971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 316 - 411
Target Start/End: Original strand, 20928 - 21023
Alignment:
Q  316 aaccctaaccccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttt 411  Q
    ||||| || ||||||||| |||| ||||||  |||||  ||||||||||  ||||||  ||||| |||  ||||||||||| ||||||||||||||    
T  20928 aacccaaatcccaaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcattgaattacctactcttt 21023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 355 - 418
Target Start/End: Complemental strand, 59837 - 59774
Alignment:
Q  355 ttattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 418  Q
    ||||||||||| || |||| ||||| |||  |||||||||||||||||||||| ||| ||||||    
T  59837 ttattctacaacctaaacatcaatttttatattaattcattggattacctactatttcaacaat 59774  T

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Target: scaffold0057 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 316 - 411
Target Start/End: Complemental strand, 70074 - 69979
Alignment:
Q  316 aaccctaaccccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttt 411  Q
    ||||| || ||||||||| |||| ||||||  |||||  || |||||||  ||||||  ||||| |||  ||||||||||||||||||||||||||    
T  70074 aacccaaatcccaaatttgataggaaactcaacctattttttttctacagcctgaacttcaattcttatgttaattcattggattacctactcttt 69979  T

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Target: scaffold0034 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 316 - 411
Target Start/End: Complemental strand, 29437 - 29342
Alignment:
Q  316 aaccctaaccccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttt 411  Q
    ||||| || ||||||||| |||| ||||||  |||||  ||||||||||  ||||||  ||||| |||  ||||||||||| ||||||||||||||    
T  29437 aacccaaatcccaaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcattgaattacctactcttt 29342  T

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Target: scaffold0017 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 407 - 454
Target Start/End: Original strand, 26650 - 26697
Alignment:
Q  407 tcttttaacaattgaactcaatctaaccataatctctataacaccaaa 454  Q
    ||||||||||||| || ||||||||||| |||||||||||||| ||||    
T  26650 tcttttaacaattaaattcaatctaaccctaatctctataacatcaaa 26697  T

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Target: scaffold0017; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 418
Target Start/End: Original strand, 23476 - 23546
Alignment:
Q  348 cctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 418  Q
    ||||| |||||||||||| ||||| | ||||| | |  |||||||||| |||||||||| |||||||||||    
T  23476 cctattattattctacaacctgaaaatcaattttcatgttaattcatttgattacctacacttttaacaat 23546  T

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Target: scaffold0040 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 418
Target Start/End: Complemental strand, 106373 - 106280
Alignment:
Q  325 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttttaacaat 418  Q
    ||||||||| |||| |||||   ||||  |||||| ||||| |||||||  |||||||||||||||||||   ||||||| |||||| ||||||    
T  106373 cccaaatttgataggaaacttaacctacgattattttacaacctgaacaataattattaccttaattcatcaaattaccttctctttcaacaat 106280  T

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Target: scaffold1800 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold1800
Description:

Target: scaffold1800; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 418
Target Start/End: Original strand, 446 - 541
Alignment:
Q  325 cccaaattttatagaaaactcttcctataattattctacaatctgaacaccaatt--attaccttaattcattggattacctactcttttaacaat 418  Q
    ||||||||| |||||||||  | |||||  ||||||||||| | ||||| |||||  ||||  ||||||||||| ||||||||| |||| ||||||    
T  446 cccaaatttgatagaaaacattacctattgttattctacaacccgaacatcaattgtattatattaattcattgaattacctacactttcaacaat 541  T

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Target: scaffold0436 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 411
Target Start/End: Original strand, 8802 - 8886
Alignment:
Q  327 caaattttatagaaaactcttcctataattattctacaatctgaacaccaattattaccttaattcattggattacctactcttt 411  Q
    ||||||| |||| ||||||  |||||  ||||||||||  ||||||  ||||| |||  ||||||||||| ||||||||||||||    
T  8802 caaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcattgaattacctactcttt 8886  T

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