View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0342_2D_high_10 (Length: 382)

Name: NF0342_2D_high_10
Description: NF0342_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0342_2D_high_10
NF0342_2D_high_10
[»] chr6 (17 HSPs)
chr6 (91-382)||(16655603-16655893)
chr6 (91-344)||(16558451-16558702)
chr6 (91-198)||(16870423-16870530)
chr6 (273-382)||(16784994-16785103)
chr6 (271-382)||(16794930-16795041)
chr6 (271-378)||(17095709-17095816)
chr6 (271-382)||(16870265-16870376)
chr6 (273-382)||(16778898-16779007)
chr6 (62-133)||(16784791-16784862)
chr6 (271-382)||(17067201-17067312)
chr6 (271-382)||(16985167-16985275)
chr6 (92-192)||(17067012-17067112)
chr6 (94-167)||(16984995-16985065)
chr6 (84-201)||(16794747-16794858)
chr6 (273-322)||(16841550-16841599)
chr6 (271-338)||(18808556-18808623)
chr6 (273-322)||(16836439-16836488)
[»] scaffold0133 (4 HSPs)
scaffold0133 (271-382)||(10568-10679)
scaffold0133 (273-382)||(6222-6331)
scaffold0133 (273-312)||(15867-15906)
scaffold0133 (93-161)||(6055-6120)
[»] scaffold0256 (1 HSPs)
scaffold0256 (273-382)||(6881-6990)
[»] chr3 (3 HSPs)
chr3 (271-382)||(38941681-38941792)
chr3 (274-382)||(7055606-7055717)
chr3 (95-135)||(7055838-7055878)
[»] chr8 (2 HSPs)
chr8 (271-382)||(13375802-13375913)
chr8 (91-136)||(13375613-13375657)
[»] chr2 (1 HSPs)
chr2 (271-319)||(20151581-20151629)
[»] scaffold0144 (1 HSPs)
scaffold0144 (271-341)||(4169-4239)
[»] scaffold0511 (1 HSPs)
scaffold0511 (271-333)||(3539-3601)


Alignment Details
Target: chr6 (Bit Score: 162; Significance: 2e-86; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 91 - 382
Target Start/End: Original strand, 16655603 - 16655893
Alignment:
91 cttccatgctgatatgatattctctgcacacattgtttaatataataagtctataatcacaccatataatttgatattatagtaacacataagacaaagg 190  Q
    |||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||    
16655603 cttccatgctgataagatattatctgcacacattgttcaatataataagtctataatcacaccatctgatttgatattatagtaacacaaaagacaaagg 16655702  T
191 aatcaaatattaagaaaggtggcaaatcaat-taaattaccactgattgttgattttgttggttctacaaaacgtggcaaatcaggaatgtgagctatct 289  Q
    |||||||||  |||  |   |  |||| ||  |||||||||||  |||||||  ||||||| |||| |||||  ||||||||||||||||||||||||||    
16655703 aatcaaata--aagggattcgttaaattaaagtaaattaccacaaattgttggctttgttgtttcttcaaaagatggcaaatcaggaatgtgagctatct 16655800  T
290 tatgccaatcttcacctattcctctcttgcatctcttctccaacatagggcaatcataaatacttaactcttgcaagttttggagttgctgaa 382  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||| || |||| ||||||| |||||||||||||||||||||||    
16655801 tatgccaatcttcacctattcctctcttgcatctcttctccaacttagggcaaccacaaattcttaacttttgcaagttttggagttgctgaa 16655893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 91 - 344
Target Start/End: Complemental strand, 16558702 - 16558451
Alignment:
91 cttccatgctgatatgatattctctgcacacattgtttaatataataagtctataatcacaccatataa-tttgatattatagtaacacataagacaaag 189  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||| ||| |||||||||||||||| |||||||||    
16558702 cttccatgctgatatgatattatctgcacacattgttcaatataataagtctataatcacaccatctaatttttatattatagtaacacaaaagacaaag 16558603  T
190 gaatcaaatattaagaaaggtggcaaa-tcaattaaattaccactgattgttgattttgttggttctacaaaacgtggcaaatcaggaatgtgagctatc 288  Q
    ||||||||||  |||  |   |  ||| | || |||||||||||  ||||||| |||||||| ||| ||| ||  |||||||||||||||||||||||||    
16558602 gaatcaaata--aagggattcgttaaattaaagtaaattaccacaaattgttggttttgttgtttccacagaagatggcaaatcaggaatgtgagctatc 16558505  T
289 ttatgccaatcttcacctattcctctcttgcatctcttctccaacatagggcaatc 344  Q
    ||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||    
16558504 ttatgccaatcgtcacctattc--ctcttgcatctcttctccaacatagggcaatc 16558451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 91 - 198
Target Start/End: Complemental strand, 16870530 - 16870423
Alignment:
91 cttccatgctgatatgatattctctgcacacattgtttaatataataagtctataatcacaccatataatttgatattatagtaacacataagacaaagg 190  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||    
16870530 cttccatgctgatatgatattatctgcacacattgttcaatataataagtctataatcacaccatctaattttatattatagtaacacaaaagacaaagg 16870431  T
191 aatcaaat 198  Q
    ||||||||    
16870430 aatcaaat 16870423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 273 - 382
Target Start/End: Original strand, 16784994 - 16785103
Alignment:
273 aggaatgtgagctatcttatgccaatcttcacctattcctctcttgcatctcttctccaacatagggcaatcataaatacttaactcttgcaagttttgg 372  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || ||||| ||||  |||||||||||||    
16784994 aggaatgtgagctatcttatgccaatcttcacctattcctctcttgcatctcttctccaacatagggcaacgatcaatacataacatttgcaagttttgg 16785093  T
373 agttgctgaa 382  Q
    ||||||||||    
16785094 agttgctgaa 16785103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 271 - 382
Target Start/End: Original strand, 16794930 - 16795041
Alignment:
271 tcaggaatgtgagctatcttatgccaatcttcacctattcctctcttgcatctcttctccaacatagggcaatcataaatacttaactcttgcaagtttt 370  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||| || ||||||||||||||||||||||     
16794930 tcaggaacgtgagctatcttatgccaatcttcaccttttcctctcttgcatctcatctccaacaaagggcaataatcaatacttaactcttgcaagtttc 16795029  T
371 ggagttgctgaa 382  Q
    ||||||||||||    
16795030 ggagttgctgaa 16795041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 271 - 378
Target Start/End: Original strand, 17095709 - 17095816
Alignment:
271 tcaggaatgtgagctatcttatgccaatcttcacctattcctctcttgcatctcttctccaacatagggcaatcataaatacttaactcttgcaagtttt 370  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||||||| ||||    
17095709 tcaggaatgtgagctatctaatgccaatcttcacctattcctctcttacatctcttctccaacatagggcaattataaatgcttaactcttgcaattttt 17095808  T
371 ggagttgc 378  Q
     |||||||    
17095809 agagttgc 17095816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 271 - 382
Target Start/End: Complemental strand, 16870376 - 16870265
Alignment:
271 tcaggaatgtgagctatcttatgccaatcttcacctattcctctcttgcatctcttctccaacatagggcaatcataaatacttaactcttgcaagtttt 370  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||   |||||||     
16870376 tcaggaatgtgagctatcttatgccaatcttcacctattcctctcttgcatctcttctccaacttagggcaatcaacaatacttaactccatcaagtttg 16870277  T
371 ggagttgctgaa 382  Q
     |||||||||||    
16870276 tgagttgctgaa 16870265  T

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Target: chr6; HSP #8
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 273 - 382
Target Start/End: Original strand, 16778898 - 16779007
Alignment:
273 aggaatgtgagctatcttatgccaatcttcacctattcctctcttgcatctcttctccaacatagggcaatcataaatacttaactcttgcaagttttgg 372  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| |||  |  ||||||||| | |||||||||||||    
16778898 aggaatgtgagctatcttatgccaatcttcaccttttcctctcttgcatctcttctccaacttaggacaacgaccaatacttaaatattgcaagttttgg 16778997  T
373 agttgctgaa 382  Q
    ||||||||||    
16778998 agttgctgaa 16779007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 62 - 133
Target Start/End: Original strand, 16784791 - 16784862
Alignment:
62 gggtattgagttgggcggtggcagaattgcttccatgctgatatgatattctctgcacacattgtttaatat 133  Q
    |||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||    
16784791 gggtattgagatgggcggtgccagaattgcttccatgctgatttgatattctctgcacacattgtttaatat 16784862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 271 - 382
Target Start/End: Original strand, 17067201 - 17067312
Alignment:
271 tcaggaatgtgagctatcttatgccaatcttcacctattcctctcttgcatctcttctccaacatagggcaatcataaatacttaactcttgcaagtttt 370  Q
    ||||||||||||||||| |||||||||||||||||| ||||| ||||  |||||||||||||| |||||||||||| || || || |  |||||||||      
17067201 tcaggaatgtgagctattttatgccaatcttcaccttttcctatcttcaatctcttctccaacttagggcaatcatcaaaacgtatcatttgcaagttcc 17067300  T
371 ggagttgctgaa 382  Q
    ||||||||||||    
17067301 ggagttgctgaa 17067312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 271 - 382
Target Start/End: Original strand, 16985167 - 16985275
Alignment:
271 tcaggaatgtgagctatcttatgccaatcttcacctattcctctcttgcatctcttctccaacatagggcaatcataaatacttaactcttgcaagtttt 370  Q
    ||||||||||||||||||||||||   |||||||     ||||||||| ||||||||||||||||||||||||||  |||| |||||| |||||| |||     
16985167 tcaggaatgtgagctatcttatgctggtcttcacaa---cctctcttgtatctcttctccaacatagggcaatcaataataattaacttttgcaaatttc 16985263  T
371 ggagttgctgaa 382  Q
    ||||||||||||    
16985264 ggagttgctgaa 16985275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 92 - 192
Target Start/End: Original strand, 17067012 - 17067112
Alignment:
92 ttccatgctgatatgatattctctgcacacattgtttaatataataagtctataatcacaccatataatttgatattatagtaacacataagacaaagga 191  Q
    |||||||||||| | ||||||||||||||||||||| ||||||||||||||| |||||||  ||||||||| ||  |||||||| ||| || | ||||||    
17067012 ttccatgctgatttaatattctctgcacacattgttcaatataataagtctaaaatcacagtatataattttattctatagtaagacaaaaaagaaagga 17067111  T
192 a 192  Q
    |    
17067112 a 17067112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 94 - 167
Target Start/End: Original strand, 16984995 - 16985065
Alignment:
94 ccatgctgatatgatattctctgcacacattgtttaatataataagtctataatcacaccatataatttgatat 167  Q
    ||||||||||||||||||||||||||| |||||| |||   ||||||||| |||||||||||||||||||||||    
16984995 ccatgctgatatgatattctctgcacatattgttcaat---ataagtctaaaatcacaccatataatttgatat 16985065  T

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Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 84 - 201
Target Start/End: Original strand, 16794747 - 16794858
Alignment:
84 agaattgcttccatgctgatatgatattctctgcacacattgtttaatataataagtctataatcacaccatataatttgatattatagtaacacataag 183  Q
    ||||||||||||||| |||||| |||||||||||| ||||||||||||   ||||||||| ||| | | |||   |||||||| |||||||| ||| |||    
16794747 agaattgcttccatgttgatataatattctctgcagacattgtttaat---ataagtctaaaataaaatcat---atttgatactatagtaaaacaaaag 16794840  T
184 acaaaggaatcaaatatt 201  Q
    | |||||||| |||||||    
16794841 agaaaggaatgaaatatt 16794858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 273 - 322
Target Start/End: Original strand, 16841550 - 16841599
Alignment:
273 aggaatgtgagctatcttatgccaatcttcacctattcctctcttgcatc 322  Q
    |||||||||||||||||||||||||||||| ||| || || |||||||||    
16841550 aggaatgtgagctatcttatgccaatcttcccctgtttctttcttgcatc 16841599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 271 - 338
Target Start/End: Complemental strand, 18808623 - 18808556
Alignment:
271 tcaggaatgtgagctatcttatgccaatcttcacctattcctctcttgcatctcttctccaacatagg 338  Q
    ||||||| |||||||||||| ||||||||||| ||  ||||| |||||||||  ||||||||| ||||    
18808623 tcaggaacgtgagctatcttttgccaatcttccccagttcctttcttgcatcgtttctccaacttagg 18808556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 322
Target Start/End: Original strand, 16836439 - 16836488
Alignment:
273 aggaatgtgagctatcttatgccaatcttcacctattcctctcttgcatc 322  Q
    |||||||||||||||||| ||||||||||| ||| || || |||||||||    
16836439 aggaatgtgagctatcttgtgccaatcttcccctgtttctttcttgcatc 16836488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 88; Significance: 3e-42; HSPs: 4)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 271 - 382
Target Start/End: Original strand, 10568 - 10679
Alignment:
271 tcaggaatgtgagctatcttatgccaatcttcacctattcctctcttgcatctcttctccaacatagggcaatcataaatacttaactcttgcaagtttt 370  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| || |||| ||||||| |||||||||||    
10568 tcaggaatgtgagctatcttatgccaatcttcacctatacctctcttgcatctcttctccaacttagggcaaccacaaattcttaacttttgcaagtttt 10667  T
371 ggagttgctgaa 382  Q
    ||||||||||||    
10668 ggagttgctgaa 10679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 273 - 382
Target Start/End: Original strand, 6222 - 6331
Alignment:
273 aggaatgtgagctatcttatgccaatcttcacctattcctctcttgcatctcttctccaacatagggcaatcataaatacttaactcttgcaagttttgg 372  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |  ||||| |||||  |||||||||||||    
6222 aggaatgtgagctatcttatgccaatcttcacctattcctctcttgcatctcttctccaatataggacaacctgaaatagttaacgtttgcaagttttgg 6321  T
373 agttgctgaa 382  Q
    ||||||||||    
6322 agttgctgaa 6331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 312
Target Start/End: Original strand, 15867 - 15906
Alignment:
273 aggaatgtgagctatcttatgccaatcttcacctattcct 312  Q
    |||||||||||||||||||||||||||||||||| |||||    
15867 aggaatgtgagctatcttatgccaatcttcaccttttcct 15906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 6055 - 6120
Alignment:
93 tccatgctgatatgatattctctgcacacattgtttaatataataagtctataatcacaccatataatt 161  Q
    |||||| || ||| ||||||||||||||||||||| |||   ||||||||| |||||||||||||||||    
6055 tccatgttgttataatattctctgcacacattgttcaat---ataagtctaaaatcacaccatataatt 6120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 273 - 382
Target Start/End: Original strand, 6881 - 6990
Alignment:
273 aggaatgtgagctatcttatgccaatcttcacctattcctctcttgcatctcttctccaacatagggcaatcataaatacttaactcttgcaagttttgg 372  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| |||||   |||||||||||||    
6881 aggaatgtgagctatcttatgccaatcttcacctattcctctcttgcatctcttctccaacatagggcaaccacaaatccttaagctttgcaagttttgg 6980  T
373 agttgctgaa 382  Q
    ||||||||||    
6981 agttgctgaa 6990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 1e-32; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 271 - 382
Target Start/End: Complemental strand, 38941792 - 38941681
Alignment:
271 tcaggaatgtgagctatcttatgccaatcttcacctattcctctcttgcatctcttctccaacatagggcaatcataaatacttaactcttgcaagtttt 370  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||  ||||   ||   |||||||||||    
38941792 tcaggaatgtgagctatcttatgccaatcttcaccttttcctctcttgcatctcttctccaacatagggcaagcaacaatatacaatctttgcaagtttt 38941693  T
371 ggagttgctgaa 382  Q
    ||||||||||||    
38941692 ggagttgctgaa 38941681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 274 - 382
Target Start/End: Complemental strand, 7055717 - 7055606
Alignment:
274 ggaatgtgagctatcttatgccaatcttcacctattcctctcttgcatctc-ttctc--caacatagggcaatcataaatacttaactcttgcaagtttt 370  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| | |||||  |||||||| || |  |  ||||||||||| ||| |||||||    
7055717 ggaatgtgagctatcttatgccaatcttcacctactcctctcttgcatcgctttctcaacaacatagagctacgaagaatacttaacttttgtaagtttt 7055618  T
371 ggagttgctgaa 382  Q
    ||||||||||||    
7055617 ggagttgctgaa 7055606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 135
Target Start/End: Complemental strand, 7055878 - 7055838
Alignment:
95 catgctgatatgatattctctgcacacattgtttaatataa 135  Q
    ||||||||||||||||||||||||| ||||||| |||||||    
7055878 catgctgatatgatattctctgcacccattgttcaatataa 7055838  T

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Target: chr8 (Bit Score: 64; Significance: 7e-28; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 271 - 382
Target Start/End: Original strand, 13375802 - 13375913
Alignment:
271 tcaggaatgtgagctatcttatgccaatcttcacctattcctctcttgcatctcttctccaacatagggcaatcataaatacttaactcttgcaagtttt 370  Q
    ||||| |||||||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||| ||||  |  ||||||||||  ||||||||||     
13375802 tcaggtatgtgagctatcttatcccaatcttctcctattcctctcttgcatcgcttctccaacatagagcaactaacaatacttaacctttgcaagtttc 13375901  T
371 ggagttgctgaa 382  Q
    ||||||||||||    
13375902 ggagttgctgaa 13375913  T

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Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 136
Target Start/End: Original strand, 13375613 - 13375657
Alignment:
91 cttccatgctgatatgatattctctgcacacattgtttaatataat 136  Q
    |||||||| |||||||||||||||||||| ||||||| ||||||||    
13375613 cttccatgttgatatgatattctctgcac-cattgttcaatataat 13375657  T

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Target: chr2 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 271 - 319
Target Start/End: Original strand, 20151581 - 20151629
Alignment:
271 tcaggaatgtgagctatcttatgccaatcttcacctattcctctcttgc 319  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||    
20151581 tcaggaatgttagctatcttatgccaatcttcacctattcctctcttgc 20151629  T

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Target: scaffold0144 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 271 - 341
Target Start/End: Complemental strand, 4239 - 4169
Alignment:
271 tcaggaatgtgagctatcttatgccaatcttcacctattcctctcttgcatctcttctccaacatagggca 341  Q
    ||||||| ||||| |||||||||||||||||| ||  ||||| ||||||||| ||||||||||||||||||    
4239 tcaggaacgtgagatatcttatgccaatcttccccggttcctttcttgcatcgcttctccaacatagggca 4169  T

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Target: scaffold0511 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0511
Description:

Target: scaffold0511; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 333
Target Start/End: Complemental strand, 3601 - 3539
Alignment:
271 tcaggaatgtgagctatcttatgccaatcttcacctattcctctcttgcatctcttctccaac 333  Q
    ||||||| |||||||||||| ||||||||||| ||  ||||| |||||||||  |||||||||    
3601 tcaggaacgtgagctatcttttgccaatcttccccagttcctttcttgcatcgtttctccaac 3539  T

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