View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0342_2D_high_37 (Length: 206)

Name: NF0342_2D_high_37
Description: NF0342_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0342_2D_high_37
NF0342_2D_high_37
[»] chr1 (22 HSPs)
chr1 (6-194)||(16832353-16832541)
chr1 (6-194)||(431911-432099)
chr1 (6-194)||(12167786-12167974)
chr1 (6-194)||(9667266-9667454)
chr1 (10-194)||(11738368-11738552)
chr1 (6-194)||(33491768-33491956)
chr1 (6-194)||(38121502-38121690)
chr1 (6-194)||(49249468-49249656)
chr1 (6-194)||(39000751-39000939)
chr1 (26-194)||(40999674-40999842)
chr1 (6-170)||(44504862-44505026)
chr1 (6-190)||(13217622-13217807)
chr1 (6-194)||(16130909-16131093)
chr1 (6-190)||(8995836-8996020)
chr1 (6-190)||(36084162-36084346)
chr1 (19-191)||(15161844-15162015)
chr1 (66-194)||(20225932-20226060)
chr1 (73-190)||(9269106-9269223)
chr1 (108-191)||(13830774-13830857)
chr1 (108-190)||(3365800-3365882)
chr1 (108-191)||(39456777-39456860)
chr1 (108-148)||(6244649-6244689)
[»] chr8 (26 HSPs)
chr8 (6-194)||(28370497-28370685)
chr8 (6-194)||(28925713-28925901)
chr8 (6-194)||(3299205-3299393)
chr8 (6-194)||(9067737-9067925)
chr8 (6-194)||(41576901-41577089)
chr8 (6-194)||(8742853-8743041)
chr8 (18-194)||(11308557-11308733)
chr8 (6-194)||(27348430-27348618)
chr8 (6-191)||(13510367-13510552)
chr8 (6-191)||(13599897-13600082)
chr8 (9-194)||(34006343-34006528)
chr8 (6-190)||(22242817-22243001)
chr8 (6-190)||(12538567-12538751)
chr8 (6-190)||(22222249-22222433)
chr8 (6-190)||(22228591-22228775)
chr8 (6-150)||(36736820-36736964)
chr8 (6-190)||(22227082-22227266)
chr8 (6-190)||(22233424-22233608)
chr8 (6-191)||(16958956-16959139)
chr8 (6-189)||(4861526-4861709)
chr8 (6-190)||(13848902-13849087)
chr8 (7-132)||(21692851-21692976)
chr8 (6-191)||(17993270-17993455)
chr8 (107-194)||(22181081-22181168)
chr8 (6-82)||(22181005-22181081)
chr8 (108-191)||(1607775-1607858)
[»] chr3 (29 HSPs)
chr3 (6-194)||(20962826-20963014)
chr3 (6-194)||(8626027-8626215)
chr3 (6-194)||(10385640-10385828)
chr3 (6-194)||(37471257-37471445)
chr3 (6-194)||(7652792-7652980)
chr3 (6-194)||(9989799-9989987)
chr3 (6-194)||(20837497-20837685)
chr3 (6-194)||(22098070-22098258)
chr3 (6-194)||(22098384-22098572)
chr3 (6-194)||(27850121-27850309)
chr3 (7-194)||(52307655-52307842)
chr3 (9-191)||(36469009-36469191)
chr3 (6-194)||(4742572-4742761)
chr3 (6-194)||(45528051-45528239)
chr3 (6-191)||(1232064-1232249)
chr3 (6-194)||(37023094-37023282)
chr3 (6-194)||(48167764-48167952)
chr3 (6-191)||(3588804-3588989)
chr3 (6-128)||(23411881-23412003)
chr3 (6-191)||(33248393-33248578)
chr3 (6-190)||(27104394-27104579)
chr3 (6-147)||(49434501-49434642)
chr3 (73-191)||(23194390-23194508)
chr3 (6-190)||(2357564-2357748)
chr3 (124-194)||(23394091-23394161)
chr3 (104-187)||(24899507-24899590)
chr3 (104-187)||(24905973-24906056)
chr3 (108-154)||(17404747-17404793)
chr3 (8-50)||(26335514-26335556)
[»] chr2 (20 HSPs)
chr2 (6-194)||(27257788-27257976)
chr2 (6-194)||(42700544-42700731)
chr2 (8-194)||(23924602-23924788)
chr2 (6-194)||(13229912-13230100)
chr2 (6-194)||(29224118-29224306)
chr2 (6-194)||(29337417-29337605)
chr2 (6-194)||(32523332-32523520)
chr2 (6-191)||(21160369-21160554)
chr2 (6-194)||(36039832-36040020)
chr2 (32-194)||(8679365-8679527)
chr2 (6-190)||(41977998-41978182)
chr2 (6-191)||(14701047-14701232)
chr2 (6-194)||(9786674-9786862)
chr2 (6-194)||(28457447-28457635)
chr2 (6-194)||(43991929-43992106)
chr2 (19-191)||(36557135-36557307)
chr2 (6-194)||(36667458-36667627)
chr2 (7-132)||(31758682-31758807)
chr2 (6-191)||(24662701-24662887)
chr2 (105-148)||(11652163-11652206)
[»] scaffold0298 (2 HSPs)
scaffold0298 (6-194)||(15544-15732)
scaffold0298 (6-194)||(11774-11962)
[»] scaffold0076 (1 HSPs)
scaffold0076 (6-194)||(25220-25408)
[»] chr7 (27 HSPs)
chr7 (6-194)||(2797133-2797321)
chr7 (6-194)||(10345875-10346063)
chr7 (6-194)||(31157846-31158034)
chr7 (6-194)||(8107458-8107646)
chr7 (6-194)||(23795498-23795686)
chr7 (6-194)||(2631800-2631988)
chr7 (6-170)||(22820508-22820672)
chr7 (6-194)||(22909521-22909709)
chr7 (15-194)||(12191254-12191433)
chr7 (6-194)||(6172919-6173107)
chr7 (6-194)||(45500281-45500469)
chr7 (7-194)||(31882515-31882702)
chr7 (6-194)||(12184268-12184451)
chr7 (18-194)||(22321371-22321547)
chr7 (30-194)||(22825036-22825200)
chr7 (6-190)||(1274991-1275176)
chr7 (6-194)||(31879003-31879190)
chr7 (6-194)||(12090029-12090218)
chr7 (6-191)||(24483149-24483334)
chr7 (6-194)||(1954331-1954518)
chr7 (6-193)||(31664083-31664270)
chr7 (6-191)||(2478064-2478249)
chr7 (6-191)||(3544451-3544636)
chr7 (26-194)||(4704948-4705116)
chr7 (6-90)||(19471864-19471948)
chr7 (6-190)||(29032368-29032552)
chr7 (108-153)||(8138948-8138992)
[»] chr6 (23 HSPs)
chr6 (6-194)||(3539451-3539639)
chr6 (6-194)||(24160826-24161014)
chr6 (6-194)||(24879269-24879457)
chr6 (6-194)||(26514998-26515186)
chr6 (6-191)||(34914092-34914277)
chr6 (6-191)||(14271076-14271261)
chr6 (6-194)||(9932375-9932563)
chr6 (6-190)||(25977353-25977537)
chr6 (7-191)||(1455196-1455380)
chr6 (7-191)||(1466888-1467072)
chr6 (6-190)||(13181931-13182115)
chr6 (6-193)||(21596099-21596286)
chr6 (6-194)||(16698313-16698501)
chr6 (6-194)||(32806333-32806521)
chr6 (6-169)||(13173419-13173582)
chr6 (16-194)||(5988572-5988750)
chr6 (6-128)||(34006906-34007028)
chr6 (6-190)||(21631587-21631771)
chr6 (6-190)||(9518020-9518204)
chr6 (6-191)||(15642822-15643005)
chr6 (132-194)||(8667461-8667523)
chr6 (113-191)||(26604831-26604909)
chr6 (143-194)||(5670847-5670898)
[»] scaffold0147 (1 HSPs)
scaffold0147 (6-194)||(7135-7323)
[»] chr5 (19 HSPs)
chr5 (6-194)||(24836126-24836314)
chr5 (6-194)||(34456699-34456887)
chr5 (6-194)||(9404828-9405016)
chr5 (6-194)||(11722846-11723034)
chr5 (6-194)||(11767158-11767346)
chr5 (6-194)||(16904179-16904367)
chr5 (6-194)||(33435006-33435194)
chr5 (6-191)||(32227062-32227247)
chr5 (6-194)||(6270294-6270482)
chr5 (6-194)||(27166668-27166856)
chr5 (6-194)||(30606646-30606834)
chr5 (6-194)||(7315608-7315796)
chr5 (6-194)||(14344865-14345053)
chr5 (6-194)||(34869314-34869504)
chr5 (6-190)||(37251479-37251663)
chr5 (76-194)||(31846426-31846542)
chr5 (6-102)||(519433-519529)
chr5 (24-153)||(39655647-39655776)
chr5 (6-49)||(31846383-31846426)
[»] chr4 (27 HSPs)
chr4 (6-194)||(46691607-46691795)
chr4 (8-194)||(52618908-52619094)
chr4 (6-194)||(4838706-4838894)
chr4 (6-194)||(22048085-22048273)
chr4 (6-194)||(40995117-40995305)
chr4 (6-194)||(42532456-42532644)
chr4 (9-194)||(55327179-55327363)
chr4 (6-194)||(323842-324030)
chr4 (6-194)||(5273132-5273320)
chr4 (6-194)||(21677238-21677425)
chr4 (6-194)||(26070131-26070319)
chr4 (6-194)||(21668474-21668663)
chr4 (10-194)||(1188372-1188556)
chr4 (6-194)||(19247398-19247586)
chr4 (8-194)||(35416266-35416452)
chr4 (6-194)||(26373201-26373389)
chr4 (7-192)||(42271781-42271967)
chr4 (6-190)||(20949149-20949334)
chr4 (16-191)||(30217960-30218135)
chr4 (60-193)||(33239375-33239508)
chr4 (6-138)||(9417059-9417191)
chr4 (16-190)||(53895792-53895966)
chr4 (6-190)||(33110274-33110460)
chr4 (103-184)||(19730985-19731066)
chr4 (113-194)||(44428961-44429042)
chr4 (105-191)||(6640465-6640551)
chr4 (108-153)||(12097324-12097368)
[»] scaffold0444 (1 HSPs)
scaffold0444 (6-194)||(12058-12246)
[»] scaffold0159 (1 HSPs)
scaffold0159 (6-194)||(28469-28657)
[»] scaffold0124 (1 HSPs)
scaffold0124 (6-194)||(12598-12786)
[»] scaffold0336 (1 HSPs)
scaffold0336 (6-194)||(9146-9334)
[»] scaffold0019 (2 HSPs)
scaffold0019 (6-194)||(116138-116326)
scaffold0019 (6-194)||(168978-169166)
[»] scaffold0014 (1 HSPs)
scaffold0014 (6-194)||(76022-76210)
[»] scaffold0505 (1 HSPs)
scaffold0505 (6-190)||(558-742)
[»] scaffold0859 (1 HSPs)
scaffold0859 (6-190)||(4920-5105)
[»] scaffold0059 (1 HSPs)
scaffold0059 (6-190)||(16047-16231)
[»] scaffold0091 (1 HSPs)
scaffold0091 (6-191)||(14589-14773)
[»] scaffold0160 (1 HSPs)
scaffold0160 (6-190)||(34897-35081)
[»] scaffold0515 (1 HSPs)
scaffold0515 (104-191)||(7258-7345)
[»] scaffold0306 (1 HSPs)
scaffold0306 (104-191)||(7268-7355)
[»] scaffold0152 (1 HSPs)
scaffold0152 (104-191)||(24879-24966)
[»] scaffold0060 (1 HSPs)
scaffold0060 (105-191)||(6018-6104)
[»] scaffold0458 (1 HSPs)
scaffold0458 (108-191)||(6857-6940)


Alignment Details
Target: chr1 (Bit Score: 169; Significance: 8e-91; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 6 - 194
Target Start/End: Complemental strand, 16832541 - 16832353
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  16832541 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatga 16832442  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  16832441 tattgtcgagtgattgtgataatatcgcttaaaaagctagaatccgttaatcgatcgagagattgcagctgttacgcttggttgatgtc 16832353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 6 - 194
Target Start/End: Complemental strand, 432099 - 431911
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  432099 cgattaaattatccaatcgacttcgtgattgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatga 432000  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||    
T  431999 tattgtcgagtgattgtgataatatagtttaaaaagctagaattcgttaatcgatcgagagattgcagctgttacgcttggttgatgtc 431911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 6 - 194
Target Start/End: Complemental strand, 12167974 - 12167786
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| || |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  12167974 cgattaaactacccaaacgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatga 12167875  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  12167874 tattgtcgagtgattgtgataatatagtttaaaaagctagaatccgttaatcgatcgagagattgcagctgttacgcttggttgatgtc 12167786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 6 - 194
Target Start/End: Complemental strand, 9667454 - 9667266
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| ||    
T  9667454 cgattaaattatccaatcgacttcgtgatcgtttaaatgtttgggaaatcgatgtttaaaggatcccttagaaataacgatatcatttggacacgaatga 9667355  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||    
T  9667354 tattgttgagtgattgtgataatatagtttaaaaagctagaatccgttaattgatcgagagattgaagctgttacgcttggttgatgtc 9667266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 10 - 194
Target Start/End: Complemental strand, 11738552 - 11738368
Alignment:
Q  10 taaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacgatatt 109  Q
    |||| ||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  11738552 taaactatccaatcgactttgtgatcgtttaaatttttgggaaatcaatgtttaaacgatcccttagaaataacgatatcatttggacacgaatgatatt 11738453  T
Q  110 gtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||    
T  11738452 gtcgagtgattgtgataatatcgtttaaaaagctagaatctgttaatcgatcgagagattgcagctgttacgcttggttgatgtc 11738368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 6 - 194
Target Start/End: Complemental strand, 33491956 - 33491768
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| || |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  33491956 cgattaaactacccaaacgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatga 33491857  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  33491856 tattgtcgagtgattgtgataatatagtttaaaaagttagaatccgttaatcgatcgagagattgcagctgttacgcttggttgatgtc 33491768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 6 - 194
Target Start/End: Complemental strand, 38121690 - 38121502
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||| ||    
T  38121690 cgattaaactacccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataatgatatcatttgtacacgaatga 38121591  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  38121590 tattgtcgagtgattgtgataatatagtttaaaaagctagaatccgttaatcgatcgagagattgcagctgttacgcttggttgatgtc 38121502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 6 - 194
Target Start/End: Original strand, 49249468 - 49249656
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  49249468 cgattaaactacccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacaaatga 49249567  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||||| |||||||||||||    
T  49249568 tattgtcgagtgattgtgataatatagtttaaaaagctagaatccgttaatcgatcgagagattgcagctgttacacttggttgatgtc 49249656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 6 - 194
Target Start/End: Complemental strand, 39000939 - 39000751
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| || ||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| ||    
T  39000939 cgattaaactacccaatcgactttgtgattgtttaaatgtttgggaaatcgatgtttaaacgatcgcttagaaataacgatatcatttggacacgaatga 39000840  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||| || ||||||||||||||||||||    
T  39000839 tattgtcgagtgattgtgataatatagtttaaaaagctagaatccgtaaatcgatcgaaagattgcagctgttacgcttggttgatgtc 39000751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 26 - 194
Target Start/End: Complemental strand, 40999842 - 40999674
Alignment:
Q  26 ctttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacgatattgtcgagtgattgtgat 125  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  40999842 ctttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgat 40999743  T
Q  126 aatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||| |||||||||||||||||||||||||||||||||| |||| |  ||||||||||||||||||||    
T  40999742 aatatagtttaaaaagctagaatccgttaatcgatcgagaaattgcaactgttacgcttggttgatgtc 40999674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 6 - 170
Target Start/End: Complemental strand, 44505026 - 44504862
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||||| |||||||||||||||| ||    
T  44505026 cgattaaactatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgacctcttagaaataacgacatcatttggacacgaatga 44504927  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattg 170  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  44504926 tattgtcgagtgattgtgataatatcgtttaaaaagctagaattcgttaatcgatcgagagattg 44504862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 6 - 190
Target Start/End: Complemental strand, 13217807 - 13217622
Alignment:
Q  6 cgattaaattatccaatcgacttt-gtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacg 104  Q
    |||||||| ||||||||||||||| | |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||  |    
T  13217807 cgattaaactatccaatcgacttttgggatcgtttaaatgtttggaaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgattg 13217708  T
Q  105 atattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttga 190  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| || ||||||| ||||||||    
T  13217707 atattgtcgagtgattgtgataatatcatttaaaaagctaaaatccgttaatcgatcgagagattgcagctgttacgtttggttga 13217622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 6 - 194
Target Start/End: Original strand, 16130909 - 16131093
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    ||||||||  |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  16130909 cgattaaacgatccaatcgactttgtgatcgtttaaatatttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacaaatga 16131008  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||||||||||||||||| |||||    ||| ||||||| |||| || ||||||||||||||||||||    
T  16131009 tattgtcgagtgattgtgataatatcgtttaaaaagctataatcc----atcaatcgagatattgcagctgttacgcttggttgatgtc 16131093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 6 - 190
Target Start/End: Complemental strand, 8996020 - 8995836
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||  |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||| ||    
T  8996020 cgattaagctatccaatcgactttgtgatcgtttaaatgtttgggaaatcaatgtttaaacgatcccttagaaataacgatatcattttgacacgaatga 8995921  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttga 190  Q
    |||| | |||||||||||||||| | ||||||||||||||||||||||| | ||||| ||||||| || ||||||||||||||||    
T  8995920 tattattgagtgattgtgataatgtagtttaaaaagctagaatccgttatttgatcgtgagattgcagttgttacgcttggttga 8995836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 6 - 190
Target Start/End: Original strand, 36084162 - 36084346
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    ||||||||  |||||||||||||||||||  | |||||||||||||| ||||  ||||||| ||||||||||||||||||||||||||||||||||| ||    
T  36084162 cgattaaacgatccaatcgactttgtgattatataaatgtttgggaaatcgacatttaaacaatcccttagaaataacgatatcatttggacacgaatga 36084261  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttga 190  Q
    ||||||| |||||||||||||||||||||||||||||||||||  |||||| ||||| ||||||| || |||||||| |||||||    
T  36084262 tattgtcaagtgattgtgataatatcgtttaaaaagctagaatatgttaattgatcgtgagattgcagttgttacgcgtggttga 36084346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 19 - 191
Target Start/End: Original strand, 15161844 - 15162015
Alignment:
Q  19 caatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacgatattgtcgagtga 118  Q
    |||||||||||||||| ||||||||||||||||| | ||  |||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||| |    
T  15161844 caatcgactttgtgattgtttaaatgtttgggaaattgacatttaaatgatcccttagaaataacgatatcatttggacatgaatgatattgtcgagt-a 15161942  T
Q  119 ttgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgat 191  Q
    |||||||||||||||||||||||||||||||||||| | ||||||| ||||| || |||||||||| ||||||    
T  15161943 ttgtgataatatcgtttaaaaagctagaatccgttatttgatcgagcgattgcagctgttacgcttagttgat 15162015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 66 - 194
Target Start/End: Complemental strand, 20226060 - 20225932
Alignment:
Q  66 cgatcccttagaaataacgatatcatttggacacgaacgatattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgaga 165  Q
    ||||| |||| |||||||||||||||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20226060 cgatcgcttataaataacgatatcatttggacacggatgagattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgaga 20225961  T
Q  166 gattgtaggtgttacgcttggttgatgtc 194  Q
    |||||||| ||||||||||||||||||||    
T  20225960 gattgtagctgttacgcttggttgatgtc 20225932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 73 - 190
Target Start/End: Original strand, 9269106 - 9269223
Alignment:
Q  73 ttagaaataacgatatcatttggacacgaacgatattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgta 172  Q
    |||||||| |||| ||||||| |||||||| ||| ||||||||||||| |||||||||||||||||||| |||||||||||| | ||||| ||||||| |    
T  9269106 ttagaaatcacgacatcatttagacacgaatgatgttgtcgagtgattttgataatatcgtttaaaaagttagaatccgttatttgatcgtgagattgca 9269205  T
Q  173 ggtgttacgcttggttga 190  Q
    | ||||||||||||||||    
T  9269206 gttgttacgcttggttga 9269223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 108 - 191
Target Start/End: Original strand, 13830774 - 13830857
Alignment:
Q  108 ttgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgat 191  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| | | || |||||||| || ||||||| |||||||||    
T  13830774 ttgttgagtgattgtgataatatcgtttaaaaagctagaatccgttatttggtcaagagattgcagttgttacgtttggttgat 13830857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 108 - 190
Target Start/End: Complemental strand, 3365882 - 3365800
Alignment:
Q  108 ttgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttga 190  Q
    ||||||||  |||||||||||||||||| |||||||||||||||||| | ||||||||| ||| || ||||||||||||||||    
T  3365882 ttgtcgagaaattgtgataatatcgttttaaaagctagaatccgttatttgatcgagaggttgcagttgttacgcttggttga 3365800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 108 - 191
Target Start/End: Original strand, 39456777 - 39456860
Alignment:
Q  108 ttgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgat 191  Q
    |||| ||||||||||||||||||||||| |||| |||||||| |||| | ||||  ||| ||| || |||||||||||||||||    
T  39456777 ttgttgagtgattgtgataatatcgtttgaaaatctagaatctgttatttgatcatgaggttgcagttgttacgcttggttgat 39456860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 148
Target Start/End: Original strand, 6244649 - 6244689
Alignment:
Q  108 ttgtcgagtgattgtgataatatcgtttaaaaagctagaat 148  Q
    |||| |||||||||||||||||||| |||||||| ||||||    
T  6244649 ttgttgagtgattgtgataatatcgattaaaaaggtagaat 6244689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 165; Significance: 2e-88; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 6 - 194
Target Start/End: Original strand, 28370497 - 28370685
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  28370497 cgattaaattatccaatcgacttcgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatga 28370596  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  28370597 tattgtcgagtgattgtgataatatagtttaaaaagctagaatccgttaatcgatcgagagattgcagctgttacgcttggttgatgtc 28370685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 6 - 194
Target Start/End: Complemental strand, 28925901 - 28925713
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  28925901 cgattaaactacccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatga 28925802  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  28925801 tattgtcgagtgattgtgataatatagtttaaaaagctagaatccgttaatcgatcgagagattgcagctgttacgcttggttgatgtc 28925713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 6 - 194
Target Start/End: Original strand, 3299205 - 3299393
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| ||    
T  3299205 cgattaaactacccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaatgatcccttagaaataacgatatcatttggacacgaatga 3299304  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  3299305 tattgtcgagtgattgtgataatatagtttaaaaagctagaatccgttaatcgatcgagagattgcagctgttacgcttggttgatgtc 3299393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 6 - 194
Target Start/End: Complemental strand, 9067925 - 9067737
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| || |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  9067925 cgattaaactacccaaacgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatga 9067826  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  9067825 tattgtcgagtgattgtgataatatagtttaaaaagctagaatccgttaatcgatcgagagattgcagctgttacgcttggttgatgtc 9067737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 6 - 194
Target Start/End: Complemental strand, 41577089 - 41576901
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| || |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  41577089 cgattaaactacccaaacgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatga 41576990  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  41576989 tattgtcgagtgattgtgataatatagtttaaaaagctagaatccgttaatcgatcgagagattgcagctgttacgcttggttgatgtc 41576901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 6 - 194
Target Start/End: Complemental strand, 8743041 - 8742853
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| || |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  8743041 cgattaaactacccaaacgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatga 8742942  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |  |||||| |||||||||||||    
T  8742941 tattgtcgagtgattgtgataatatagtttaaaaagctagaatccgttaatcgatcgagagattgcaactgttacccttggttgatgtc 8742853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 18 - 194
Target Start/End: Complemental strand, 11308733 - 11308557
Alignment:
Q  18 ccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacgatattgtcgagtg 117  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  11308733 ccaaacgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatgatattgtcgagtg 11308634  T
Q  118 attgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||||    
T  11308633 attgtgataatatagtttaaaaagctagaatccgttaatcgatcgaaagattgcagttgttacgcttggttgatgtc 11308557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 6 - 194
Target Start/End: Original strand, 27348430 - 27348618
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| || |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  27348430 cgattaaactacccaatcaactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatga 27348529  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||| || ||||||||||||||||||||    
T  27348530 tattgtcgagtgattgtgataatatggtttaaaaagctagaatccgttaattgatcaagagattgcagctgttacgcttggttgatgtc 27348618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 6 - 191
Target Start/End: Original strand, 13510367 - 13510552
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| || |||||||||||||||||||| ||    
T  13510367 cgattaaactatccaatcgactttgtgatcgtttaaatgtttgggaaatcaatgtttaaacgatcccttagaattaccgatatcatttggacacgaatga 13510466  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgat 191  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| || |||||||||||||||||    
T  13510467 tattgtcgagtgattgtgataatatcgtttaaaaaggtagaatccgttaattgatcgagagattgcagctgttacgcttggttgat 13510552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 6 - 191
Target Start/End: Original strand, 13599897 - 13600082
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| || |||||||||||||||||||| ||    
T  13599897 cgattaaactatccaatcgactttgtgatcgtttaaatgtttgggaaatcaatgtttaaacgatcccttagaattaccgatatcatttggacacgaatga 13599996  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgat 191  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| || |||||||||||||||||    
T  13599997 tattgtcgagtgattgtgataatatcgtttaaaaaggtagaatccgttaattgatcgagagattgcagctgttacgcttggttgat 13600082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 9 - 194
Target Start/End: Complemental strand, 34006528 - 34006343
Alignment:
Q  9 ttaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacgatat 108  Q
    ||||||||||  ||| |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  34006528 ttaaattatcttatctactttgtgatcgtttaaatgtttgggaaatcgatgtttaaaagatcccttagaaataacgatatcatttggacacgaatgatat 34006429  T
Q  109 tgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||    
T  34006428 tgtcgagtgattgtgataatatagtttaaaaagctagaatctgttaatcgatcgagagattgcagctgttacgcttggttgatgtc 34006343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 6 - 190
Target Start/End: Complemental strand, 22243001 - 22242817
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    ||||| || ||||||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| ||    
T  22243001 cgattgaactatccaatcgactttgtaatcgtttaaatgtttgggaaatcgatgtttaaaagatcccttagaaataacgatatcatttggacacgaatga 22242902  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttga 190  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||| ||||||| || ||||| ||||||||||    
T  22242901 tattgtcgagtgattgtgataatatcgtttaaaaagccagaatccgttatttgatcgcgagattgcagttgttatgcttggttga 22242817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 6 - 190
Target Start/End: Original strand, 12538567 - 12538751
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    ||||||||  ||||||||||||||||||| ||||||||||||||||| ||||  ||||||| || |||||||||||||||||||||||||||||||| ||    
T  12538567 cgattaaacgatccaatcgactttgtgattgtttaaatgtttgggaaatcgacatttaaacaattccttagaaataacgatatcatttggacacgaatga 12538666  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttga 190  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||| ||||||| || ||||||||||||||||    
T  12538667 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccattatttgatcgtgagattgcagttgttacgcttggttga 12538751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 6 - 190
Target Start/End: Complemental strand, 22222433 - 22222249
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    ||||||||  ||||| ||||||||||||| |||| |||||| ||||| ||||  ||||||||||||||||||||||||||||||||||||||||||| ||    
T  22222433 cgattaaacgatccagtcgactttgtgattgttttaatgttcgggaaatcgacatttaaacgatcccttagaaataacgatatcatttggacacgaatga 22222334  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttga 190  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| | ||||| || |||| || ||||||||||||||||    
T  22222333 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatctgttatttgatcgtgaaattgcagttgttacgcttggttga 22222249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 6 - 190
Target Start/End: Complemental strand, 22228775 - 22228591
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    ||||||||  ||||| ||||||||||||| |||| |||||| ||||| ||||  ||||||||||||||||||||||||||||||||||||||||||| ||    
T  22228775 cgattaaacgatccagtcgactttgtgattgttttaatgttcgggaaatcgacatttaaacgatcccttagaaataacgatatcatttggacacgaatga 22228676  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttga 190  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| | ||||| || |||| || ||||||||||||||||    
T  22228675 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatctgttatttgatcgtgaaattgcagttgttacgcttggttga 22228591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 6 - 150
Target Start/End: Complemental strand, 36736964 - 36736820
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    ||||||||| || |||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||    
T  36736964 cgattaaatgatgcaatcgactttgtgatcgtttaaatgtttgtgaaatcgatatttaaacgatcccttagaaataacgatatcatttggacacgaatga 36736865  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatcc 150  Q
    |||||||||||||||||||||||||||||||||| ||||||||||    
T  36736864 tattgtcgagtgattgtgataatatcgtttaaaatgctagaatcc 36736820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 6 - 190
Target Start/End: Complemental strand, 22227266 - 22227082
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    ||||||||  ||||| ||||||||||||| |||| ||||||||| || ||||  ||||||||||||||||||||||||||||||||||||||||||| ||    
T  22227266 cgattaaacgatccagtcgactttgtgattgttttaatgtttggaaaatcgacatttaaacgatcccttagaaataacgatatcatttggacacgaatga 22227167  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttga 190  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||| | ||||| || |||| || ||||||||||||||||    
T  22227166 tattgtggagtgattgtgataatatcgtttaaaaagctagaatctgttatttgatcgtgaaattgcagttgttacgcttggttga 22227082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 6 - 190
Target Start/End: Complemental strand, 22233608 - 22233424
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    ||||||||  ||||| ||||||||||||| |||| ||||||||| || ||||  ||||||||||||||||||||||||||||||||||||||||||| ||    
T  22233608 cgattaaacgatccagtcgactttgtgattgttttaatgtttggaaaatcgacatttaaacgatcccttagaaataacgatatcatttggacacgaatga 22233509  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttga 190  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||| | ||||| || |||| || ||||||||||||||||    
T  22233508 tattgtggagtgattgtgataatatcgtttaaaaagctagaatctgttatttgatcgtgaaattgcagttgttacgcttggttga 22233424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 6 - 191
Target Start/End: Original strand, 16958956 - 16959139
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    ||||||||  |||||||||||| |||||| ||||||||||||| ||| | ||  |||||||||||| |||||||||||||||||||||||||||||| ||    
T  16958956 cgattaaacgatccaatcgactctgtgattgtttaaatgtttgagaaattgacatttaaacgatcc-ttagaaataacgatatcatttggacacgaatga 16959054  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgat 191  Q
    | |||||||||||||||||||||||| |||| ||||| ||||||||||| |  |||||||||||| || |||||||||||||||||    
T  16959055 tgttgtcgagtgattgtgataatatcatttataaagc-agaatccgttatttaatcgagagattgcagctgttacgcttggttgat 16959139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 6 - 189
Target Start/End: Complemental strand, 4861709 - 4861526
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    ||||||||| |||| |||||||||| ||| ||||||  ||||||||| ||||  ||| ||   ||| |||||||| |||| |||||||||||||||| ||    
T  4861709 cgattaaatgatccgatcgactttgcgattgtttaatagtttgggaaatcgacttttgaatagtccattagaaatcacgacatcatttggacacgaatga 4861610  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttg 189  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| || |||||||||||||||    
T  4861609 tgttgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttatttgatcgagagattgcagctgttacgcttggttg 4861526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 6 - 190
Target Start/End: Complemental strand, 13849087 - 13848902
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaat-gtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacg 104  Q
    ||||||||| |||||||||| ||||||||| ||||||| |||||| || ||||  ||||||| ||||||||||||||||| ||||||||| ||| ||| |    
T  13849087 cgattaaatgatccaatcgattttgtgatcatttaaatagtttggaaaatcgacatttaaacaatcccttagaaataacgctatcatttgaacatgaatg 13848988  T
Q  105 atattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttga 190  Q
     |||||| |||||||||||||||||||  ||||||||||||||||||||| | ||||||||| ||| || ||||||||||||||||    
T  13848987 gtattgttgagtgattgtgataatatcacttaaaaagctagaatccgttatttgatcgagaggttgcagttgttacgcttggttga 13848902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 7 - 132
Target Start/End: Original strand, 21692851 - 21692976
Alignment:
Q  7 gattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacgat 106  Q
    |||||||  ||||||||||||||||||| ||||||||||||||||| ||||  ||||||||||||||||||||||| ||||||||||||||||||| |||    
T  21692851 gattaaacgatccaatcgactttgtgattgtttaaatgtttgggaaatcgacatttaaacgatcccttagaaataatgatatcatttggacacgaatgat 21692950  T
Q  107 attgtcgagtgattgtgataatatcg 132  Q
    |||||||||||||| |||||||||||    
T  21692951 attgtcgagtgattatgataatatcg 21692976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 6 - 191
Target Start/End: Original strand, 17993270 - 17993455
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    ||||||||  |||| |||||||||| ||| ||||||  ||||||||| ||||  ||| ||   ||| |||||||| |||| |||||||||||||||| ||    
T  17993270 cgattaaacgatccgatcgactttgcgattgtttaatagtttgggaaatcgacttttgaatagtccattagaaatcacgacatcatttggacacgaatga 17993369  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgat 191  Q
    | ||||| ||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||| || |||||||||||||||||    
T  17993370 tgttgtcaagtgattgtgataatatcgtttaaaaagctagaattcgttatttgatcgagagattgcagctgttacgcttggttgat 17993455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 107 - 194
Target Start/End: Original strand, 22181081 - 22181168
Alignment:
Q  107 attgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||| || |||||||||    
T  22181081 attgtcgagtgattgtgataatatagtttaaaaagctagaatccgttaatcgatcgagagattgcagttgttacgattcgttgatgtc 22181168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 6 - 82
Target Start/End: Original strand, 22181005 - 22181081
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataa 82  Q
    |||||||| || ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  22181005 cgattaaactacccaatcgactttgtgatcgtttaaatgtttgagaaatcgatgtttaaacgatcccttagaaataa 22181081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 108 - 191
Target Start/End: Original strand, 1607775 - 1607858
Alignment:
Q  108 ttgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgat 191  Q
    |||| |||| |||||||||||||||||||||||| |||| ||||||| | | || |||||||| || |||||||||||||||||    
T  1607775 ttgttgagtaattgtgataatatcgtttaaaaagttagattccgttatttggtcaagagattgcagttgttacgcttggttgat 1607858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 165; Significance: 2e-88; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 6 - 194
Target Start/End: Complemental strand, 20963014 - 20962826
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| ||    
T  20963014 cgattaaactatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgttgaaacgatcccttagaaataacgatatcatttggacacgaatga 20962915  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  20962914 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgcagttgttacgcttggttgatgtc 20962826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 6 - 194
Target Start/End: Original strand, 8626027 - 8626215
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  8626027 cgattaaactacccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatga 8626126  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  8626127 tattgtcgagtgattgtgataatatagtttaaaaagctagaatccgttaatcgatcgagagattgcagctgttacgcttggttgatgtc 8626215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 6 - 194
Target Start/End: Complemental strand, 10385828 - 10385640
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  10385828 cgattaaactacccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatga 10385729  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  10385728 tattgtcgagtgattgtgataatatagtttaaaaagctagaatccgttaatcgatcgagagattgcagctgttacgcttggttgatgtc 10385640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 6 - 194
Target Start/End: Complemental strand, 37471445 - 37471257
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||    
T  37471445 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttaaaaataacgatatcatttggacacgaatga 37471346  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||| ||||||||    
T  37471345 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgcagttgttacgtttgcttgatgtc 37471257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 6 - 194
Target Start/End: Complemental strand, 7652980 - 7652792
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| || |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  7652980 cgattaaactacccaaacgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatga 7652881  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  7652880 tattgtcgagtgattgtgataatatagtttaaaaagctagaatccgttaatcgatcgagagattgcagctgttacgcttggttgatgtc 7652792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 6 - 194
Target Start/End: Original strand, 9989799 - 9989987
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| ||    
T  9989799 cgattaaactacccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacaatatcatttggacacgaatga 9989898  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  9989899 tattgtcgagtgattgtgataatatagtttaaaaagctagaatccgttaatcgatcgagagattgcagctgttacgcttggttgatgtc 9989987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 6 - 194
Target Start/End: Original strand, 20837497 - 20837685
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||    
T  20837497 cgattaaattatccaatcgacttcgtgatcgtttgaatgtttgggaaatcgacgtttaaacgatcccttagaaataacgatatcatttggacacgaatga 20837596  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  20837597 tattgtcgagtgattgtgataatatagtttaaaaagctagaatccgttaatcgatcgagagattgcagttgttacgcttggttgatgtc 20837685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 6 - 194
Target Start/End: Original strand, 22098070 - 22098258
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  22098070 cgattaaactatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatga 22098169  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||| |||||||||||||||  ||||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  22098170 tattgtcgaatgattgtgataatataatttaaaaagttagaatccgttaatcgatcgagagattgcagctgttacgcttggttgatgtc 22098258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 6 - 194
Target Start/End: Original strand, 22098384 - 22098572
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  22098384 cgattaaactatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatga 22098483  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||| |||||||||||||||  ||||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  22098484 tattgtcgaatgattgtgataatataatttaaaaagttagaatccgttaatcgatcgagagattgcagctgttacgcttggttgatgtc 22098572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 6 - 194
Target Start/End: Complemental strand, 27850309 - 27850121
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  27850309 cgattaaactatccaatcaactttgtgatcgtttaaatgtttgggaaaccgatgtttaaacgatcccttagaaataatgatatcatttggacacgaatga 27850210  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  27850209 tattgtcgagtgattgtgataatatagtttaaaaagctagaatccgttaatcgatcgagagattgcagctgttacgcttggttgatgtc 27850121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 7 - 194
Target Start/End: Complemental strand, 52307842 - 52307655
Alignment:
Q  7 gattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacgat 106  Q
    ||||||| || |||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  52307842 gattaaactacccaaacgactttgtgatcgtttaaatgtttgtgaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatgat 52307743  T
Q  107 attgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  52307742 attgtcgagtgattgtgataatatagtttaaaaagctagaatccgttaatcgatcgagagattgcagctgttacgcttggttgatgtc 52307655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 9 - 191
Target Start/End: Complemental strand, 36469191 - 36469009
Alignment:
Q  9 ttaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacgatat 108  Q
    ||||| |||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  36469191 ttaaaatatctaaacgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatgatat 36469092  T
Q  109 tgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgat 191  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  36469091 tgtcgagtgattgtgataatatagtttaaaaagctagaatccgttaatcgatcgagagattgcagctgttacgcttggttgat 36469009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 6 - 194
Target Start/End: Complemental strand, 4742761 - 4742572
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||    
T  4742761 cgattaaactatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggtcacgaatga 4742662  T
Q  106 tattgtcgagtgattgtgataatatcg-tttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||||    
T  4742661 tattttcgagtgattgtgataatatcgttttaaaaagctagaatccgttaatcgatcgagagattgcagctattacgcttggttgatgtc 4742572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 6 - 194
Target Start/End: Original strand, 45528051 - 45528239
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||| | |||||||||||||| ||    
T  45528051 cgattaaactatccaatcgactttgtgattgtttaaatgtttgggaaatcgatgtgtaaacgatcccttagaaataacgacaacatttggacacgaatga 45528150  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  45528151 cattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgcagctgttacgcttggttgatgtc 45528239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 6 - 191
Target Start/End: Complemental strand, 1232249 - 1232064
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||    
T  1232249 cgattaaactattcaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcctttggacacgaatga 1232150  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgat 191  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| || |||||||||||||||||    
T  1232149 tattgccgagtgattgtgataatatcgtttaaaaagctagaatctgttaattgatcgagagattgcagctgttacgcttggttgat 1232064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 6 - 194
Target Start/End: Original strand, 37023094 - 37023282
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||| ||| ||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||| | ||    
T  37023094 cgataaaactatccaatcgactttgtgatcgtttaaatgtttggaaaaacgatgtttaaacgatcccttagaaataacgatatcatttggacacggatga 37023193  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| || ||||||||||||||||||||    
T  37023194 tattgtcgagtgattgtgataatatcgtttaaaaagttaggatccgttaatcgatcgagagattgcagctgttacgcttggttgatgtc 37023282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 6 - 194
Target Start/End: Complemental strand, 48167952 - 48167764
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| ||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||    
T  48167952 cgattaaactatccaatcgaatttgtgagcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttgaacacgaatga 48167853  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||  ||||| |||||||||||||    
T  48167852 tattgtcgagtgattgtgataatatcgtttaaaaaactagaattcgttaatcgatcgagagattgcagccgttacacttggttgatgtc 48167764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 6 - 191
Target Start/End: Original strand, 3588804 - 3588989
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    ||||||||  ||||||||||||||||||| ||||||||||||||||| ||||  ||||||| ||||||||||||||||||||||||||||||||||| ||    
T  3588804 cgattaaacgatccaatcgactttgtgattgtttaaatgtttgggaaatcgacatttaaacaatcccttagaaataacgatatcatttggacacgaatga 3588903  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgat 191  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  || |||||||||||||||||    
T  3588904 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaattgatcgagagattacagctgttacgcttggttgat 3588989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 23411881 - 23412003
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  23411881 cgattaaactatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatga 23411980  T
Q  106 tattgtcgagtgattgtgataat 128  Q
    |||||||||||||||||||||||    
T  23411981 tattgtcgagtgattgtgataat 23412003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 6 - 191
Target Start/End: Original strand, 33248393 - 33248578
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    ||||||||  |||||||| |||||||||| |||||||||| || ||| ||||  ||||||| ||| |||||||||||||||||||||||||| |||| ||    
T  33248393 cgattaaacgatccaatcaactttgtgattgtttaaatgtatgagaaatcgacatttaaacaatctcttagaaataacgatatcatttggacgcgaatga 33248492  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgat 191  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||| |  |||||||||||||||||    
T  33248493 tattgtcgagtgattgtgataatatcgtttaaaaagctagaattcgttatttgatcgagagattgcatctgttacgcttggttgat 33248578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 6 - 190
Target Start/End: Original strand, 27104394 - 27104579
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaat-gtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacg 104  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||| ||||  |||||| |||||||| ||||||||||||| ||||||||| ||| |    
T  27104394 cgattaaatgatccaatcgactttgtgatcgtttaaatagtttgggaaatcgacatttaaatgatcccttcgaaataacgatatgatttggacatgaatg 27104493  T
Q  105 atattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttga 190  Q
    || |||| |||||||||||||||||||||||||| ||||||||| ||||| | || |||||| |||||| |||||||||| |||||    
T  27104494 atgttgttgagtgattgtgataatatcgtttaaatagctagaattcgttatttgaacgagaggttgtagctgttacgcttagttga 27104579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 6 - 147
Target Start/End: Original strand, 49434501 - 49434642
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    ||||||||  |||||||||||||||||||  |||||||||||| ||| ||||  ||||||| |||||||| |||||||||||||||||||||||||| ||    
T  49434501 cgattaaacgatccaatcgactttgtgattatttaaatgtttgagaaatcgacatttaaacaatcccttaaaaataacgatatcatttggacacgaatga 49434600  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaa 147  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  49434601 tattgtcgagtgattgtgataatatcgtttaaaaagctagaa 49434642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 73 - 191
Target Start/End: Original strand, 23194390 - 23194508
Alignment:
Q  73 ttagaaataacgatatcatttggacacgaacgatattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgta 172  Q
    |||||||| |||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| |    
T  23194390 ttagaaatcacgacatcatttggacacgaatgatgttgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttatttgatcgagagattgca 23194489  T
Q  173 ggtgttacgcttggttgat 191  Q
    | |||||||||||||||||    
T  23194490 gctgttacgcttggttgat 23194508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 6 - 190
Target Start/End: Original strand, 2357564 - 2357748
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    ||||||||| | ||||||||||||||||| ||||||  ||||||||| ||||  ||| ||   | | |||||||| |||| ||||||||||||| || ||    
T  2357564 cgattaaatgaaccaatcgactttgtgattgtttaatagtttgggaaatcgacttttgaatagttcattagaaatcacgacatcatttggacacaaatga 2357663  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttga 190  Q
    | |||| ||||||||||||||||||||||||||||| |||||||||||| | ||||| ||||||| || ||||||||||||||||    
T  2357664 tgttgttgagtgattgtgataatatcgtttaaaaagttagaatccgttatttgatcgtgagattgcagttgttacgcttggttga 2357748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 124 - 194
Target Start/End: Original strand, 23394091 - 23394161
Alignment:
Q  124 ataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  23394091 ataatatagtttaaaaagctagaatccgttaatcgatcgagagattgcagctgttacgcttggttgatgtc 23394161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 104 - 187
Target Start/End: Complemental strand, 24899590 - 24899507
Alignment:
Q  104 gatattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggt 187  Q
    ||||||||| |||||||||||||||||||||||||||   ||||||||||| | ||||| || |||| || |||||||||||||    
T  24899590 gatattgtcaagtgattgtgataatatcgtttaaaaattcagaatccgttatttgatcgtgaaattgcagttgttacgcttggt 24899507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 104 - 187
Target Start/End: Complemental strand, 24906056 - 24905973
Alignment:
Q  104 gatattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggt 187  Q
    ||||||||| |||||||||||||||||||||||||||   ||||||||||| | ||||| || |||| || |||||||||||||    
T  24906056 gatattgtcaagtgattgtgataatatcgtttaaaaattcagaatccgttatttgatcgtgaaattgcagttgttacgcttggt 24905973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 108 - 154
Target Start/End: Complemental strand, 17404793 - 17404747
Alignment:
Q  108 ttgtcgagtgattgtgataatatcgtttaaaaagctagaatccgtta 154  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||    
T  17404793 ttgttgagtgattgtgataatatcgattaaaaagctagaatccgtta 17404747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 8 - 50
Target Start/End: Original strand, 26335514 - 26335556
Alignment:
Q  8 attaaattatccaatcgactttgtgatcgtttaaatgtttggg 50  Q
    ||||||| ||||||||||||||||||| |||||||||||||||    
T  26335514 attaaatgatccaatcgactttgtgatagtttaaatgtttggg 26335556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 165; Significance: 2e-88; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 6 - 194
Target Start/End: Original strand, 27257788 - 27257976
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  27257788 cgattaaactatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatga 27257887  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||    
T  27257888 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgcagctgttacgattggttgatgtc 27257976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 6 - 194
Target Start/End: Complemental strand, 42700731 - 42700544
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  42700731 cgattaaactatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatga 42700632  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  42700631 tattgtcgagtgattgtgataatatcatttaaaaagctagaatccgttaatcgatcgagaga-tgtagttgttacgcttggttgatgtc 42700544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 159; E-Value: 7e-85
Query Start/End: Original strand, 8 - 194
Target Start/End: Complemental strand, 23924788 - 23924602
Alignment:
Q  8 attaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacgata 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  23924788 attaaattatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttaaaaataacgatatcatttggacacgaatgata 23924689  T
Q  108 ttgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||| ||||||||||||    
T  23924688 ttgtcgagtgattgtgataatatcgtttaaaaagcaagaatccgttaatcgatcgagagattgcagctgttacgtttggttgatgtc 23924602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 6 - 194
Target Start/End: Complemental strand, 13230100 - 13229912
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    ||||||||  |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  13230100 cgattaaacgatccaatcgactttgtgatcgtttaaatgtttggaaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatga 13230001  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  13230000 tattgttgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgcagctgttacgcttggttgatgtc 13229912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 6 - 194
Target Start/End: Original strand, 29224118 - 29224306
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  29224118 cgattaaactacccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacaaatga 29224217  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||||    
T  29224218 tattgtcgagtgattgtgataatatagtttaaaaagctagaatccattaatcgatcgagagattgcagctgttacgcttggttgatgtc 29224306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 6 - 194
Target Start/End: Original strand, 29337417 - 29337605
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  29337417 cgattaaactacccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacaaatga 29337516  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||||    
T  29337517 tattgtcgagtgattgtgataatatagtttaaaaagctagaatccattaatcgatcgagagattgcagctgttacgcttggttgatgtc 29337605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 6 - 194
Target Start/End: Original strand, 32523332 - 32523520
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    ||||||||  |||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||    
T  32523332 cgattaaacgatccaatcgactttgtgatcgtttaaatatttgggaaatcgatgtttcaacgatcccttagaaataacgatatcatttggacacgaatga 32523431  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| || ||||||||||||||||||||    
T  32523432 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatatgttaatcgatcgagagattgcagctgttacgcttggttgatgtc 32523520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 6 - 191
Target Start/End: Original strand, 21160369 - 21160554
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  21160369 cgattaaactattcaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatga 21160468  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgat 191  Q
    ||||| |||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||| || |||||||||||||||||    
T  21160469 tattgccgagtgattgtgataatatcgtttaaaaagttagaatctgttaattgatcgagagattgcagctgttacgcttggttgat 21160554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 6 - 194
Target Start/End: Complemental strand, 36040020 - 36039832
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| ||||| ||||||||| |||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| ||| ||    
T  36040020 cgattaaactatcctatcgactttttgattgtttaaatgtttgggaaatcgatgtttaaacgatcccttataaataacgatatcatttggacatgaatga 36039921  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||    
T  36039920 tattgtcgagtgattgtgataatatagtttaaaaagctagaatcctttaatcgatcgagagattgtatttgttacgcttggttgatgtc 36039832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 32 - 194
Target Start/End: Complemental strand, 8679527 - 8679365
Alignment:
Q  32 gatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacgatattgtcgagtgattgtgataatatc 131  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  8679527 gatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatc 8679428  T
Q  132 gtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    |||||||||| |||||||  ||||||||||||||||||| || ||||||||||||||||||||    
T  8679427 gtttaaaaagatagaatctattaatcgatcgagagattgcagctgttacgcttggttgatgtc 8679365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 6 - 190
Target Start/End: Original strand, 41977998 - 41978182
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||  |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| ||    
T  41977998 cgattaagctatccaatcgactttgtgatcgtttaaatgtttgggaaatcaatgtttaaacgatcccttagaaataacgatatcatttggacacgaatga 41978097  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttga 190  Q
    |||||| |||||||||||||||||| |||||||||| |||||||||||| | ||||| ||||||| || ||||||||||||||||    
T  41978098 tattgttgagtgattgtgataatatagtttaaaaagttagaatccgttatttgatcgtgagattgcagttgttacgcttggttga 41978182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 6 - 191
Target Start/End: Original strand, 14701047 - 14701232
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    ||||||||  ||||||||||||||||||| |||||||||||||| || ||||  |||||||||||||||||||||||||||||| ||| |||||||| ||    
T  14701047 cgattaaacgatccaatcgactttgtgattgtttaaatgtttggaaaatcgacatttaaacgatcccttagaaataacgatatcttttagacacgaatga 14701146  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgat 191  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||| || |||||||||||||||||    
T  14701147 tattgtcgagtgattgtgataatatcgtctaaaaagctagaatccgtttattgatcgagagattgcagctgttacgcttggttgat 14701232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 6 - 194
Target Start/End: Complemental strand, 9786862 - 9786674
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    ||||||||  || |||||||||||||||| ||||||||||||||||| ||||  ||||||| || |||||||||||||||||||||||||||||||| ||    
T  9786862 cgattaaacgattcaatcgactttgtgattgtttaaatgtttgggaaatcgacatttaaacaattccttagaaataacgatatcatttggacacgaatga 9786763  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| | |||||| |||||| || ||||||||||||||||||||    
T  9786762 tattgccgagtgattgtgataatatcgtttaaaaagctagaatccgttatttgatcgatagattgcagttgttacgcttggttgatgtc 9786674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 6 - 194
Target Start/End: Complemental strand, 28457635 - 28457447
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    ||||||||| |||||||| |||||||||| ||||||||||||||||| | ||  ||||||| ||| ||||||||||||||||||||||||||||||| ||    
T  28457635 cgattaaatgatccaatcaactttgtgattgtttaaatgtttgggaaatagacatttaaacaatctcttagaaataacgatatcatttggacacgaatga 28457536  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| | ||||||||||||| || | ||||||||||||||||||    
T  28457535 tattgtcgagtgattgtgataatatcgttttaaaagctagaatccgttatttgatcgagagattgcagctattacgcttggttgatgtc 28457447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 6 - 194
Target Start/End: Original strand, 43991929 - 43992106
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||| ||| |||| ||||||||||||||||||||||||||||||||| |||||           |||||||||||||||||||||||||||||| || ||    
T  43991929 cgataaaactatctaatcgactttgtgatcgtttaaatgtttgggaaatcgat-----------cccttagaaataacgatatcatttggacactaatga 43992017  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||| || ||||||||||| ||||||||    
T  43992018 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatatgttaattgatcgagagattgcagatgttacgcttgattgatgtc 43992106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 19 - 191
Target Start/End: Complemental strand, 36557307 - 36557135
Alignment:
Q  19 caatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacgatattgtcgagtga 118  Q
    |||||||||||||||| || ||||||||||| || | ||  |||||||||||||||| |||||||||||||||||||||||||| |||||| || |||||    
T  36557307 caatcgactttgtgattgtgtaaatgtttggaaaattgacatttaaacgatcccttataaataacgatatcatttggacacgaatgatattatcaagtga 36557208  T
Q  119 ttgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgat 191  Q
    ||||||||||||||||||||| |||||||||||||| | ||||||||||||| |  |||||||||| ||||||    
T  36557207 ttgtgataatatcgtttaaaaggctagaatccgttatttgatcgagagattgcaactgttacgctttgttgat 36557135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 6 - 194
Target Start/End: Complemental strand, 36667627 - 36667458
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||      |||||||||||||||||||||||||||||||||        
T  36667627 cgattaaactatccaatcgactttgtgatcgtttaaatgtttaggaaatcgatgttt------tcccttagaaataacgatatcatttggacacga---- 36667538  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||    
T  36667537 ---------gtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagatttcagctgttacgcttggttgatgtc 36667458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 7 - 132
Target Start/End: Original strand, 31758682 - 31758807
Alignment:
Q  7 gattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacgat 106  Q
    |||||||  ||||||||||||||||||| |||||||||||||| || ||||  |||||||||||||||| |||||||||||||||||||||||||| |||    
T  31758682 gattaaacgatccaatcgactttgtgattgtttaaatgtttggtaaatcgacatttaaacgatcccttaaaaataacgatatcatttggacacgaatgat 31758781  T
Q  107 attgtcgagtgattgtgataatatcg 132  Q
    ||||||||||||||||||||||||||    
T  31758782 attgtcgagtgattgtgataatatcg 31758807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 6 - 191
Target Start/End: Complemental strand, 24662887 - 24662701
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaat-gtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacg 104  Q
    ||||||||| |||||||| || |||||||  ||||||| ||||||||| ||||  ||||||  |||| |||||||| |||| || ||||||||||||| |    
T  24662887 cgattaaatgatccaatcaacattgtgattatttaaatagtttgggaaatcgacttttaaataatccattagaaatcacgacattatttggacacgaatg 24662788  T
Q  105 atattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgat 191  Q
    || || | || ||||||||||||||||||||||| || |||||||||||| | | ||||||||||| || |||||||||||||||||    
T  24662787 atgttattgaatgattgtgataatatcgtttaaagagttagaatccgttatttggtcgagagattgcagttgttacgcttggttgat 24662701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 105 - 148
Target Start/End: Original strand, 11652163 - 11652206
Alignment:
Q  105 atattgtcgagtgattgtgataatatcgtttaaaaagctagaat 148  Q
    |||||||  ||||||||||||||||||| |||||||||||||||    
T  11652163 atattgttaagtgattgtgataatatcgattaaaaagctagaat 11652206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 161; Significance: 5e-86; HSPs: 2)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 6 - 194
Target Start/End: Complemental strand, 15732 - 15544
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  15732 cgattaaactatccaatcaactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatga 15633  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  15632 tattgtcgagtgattgtgataatatagtttaaaaagctagaatccgttaatcgatcgagagattgcagctgttacgcttggttgatgtc 15544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298; HSP #2
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 6 - 194
Target Start/End: Complemental strand, 11962 - 11774
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  11962 cgattaaactatccaatctactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatga 11863  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  11862 tattgacgagtgattgtgataatatagtttaaaaagctagaatccgttaatcgatcgagagattgcagctgttacgcttggttgatgtc 11774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 161; Significance: 5e-86; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 6 - 194
Target Start/End: Complemental strand, 25408 - 25220
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  25408 cgattaaattatccaatcgacttcgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatga 25309  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||    
T  25308 tattgtcgagtgattgtgataatatagtttaaaaagctagaattcgttaatcgatcgagagattgcagctgttacgcttggttgatgtc 25220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 161; Significance: 5e-86; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 6 - 194
Target Start/End: Complemental strand, 2797321 - 2797133
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  2797321 cgattaaactatccaatcgactttgtggtcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatga 2797222  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||    
T  2797221 tattgtcgagtgattgtgataatatcgtttaaaaagctagaattcgttaatcgatcgagagattgcagctgttacgcttggttgatgtc 2797133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 6 - 194
Target Start/End: Complemental strand, 10346063 - 10345875
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  10346063 cgattaaactacccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatga 10345964  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  10345963 tattgtcgagtgattgtgataatatagtttaaaaagctagaatccgttaatcgatcgagagattgcagctgttacgcttggttgatgtc 10345875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 6 - 194
Target Start/End: Complemental strand, 31158034 - 31157846
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  31158034 cgattaaactacccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatga 31157935  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  31157934 tattgtcgagtgattgtgataatatagtttaaaaagctagaatccgttaatcgatcgagagattgcagctgttacgcttggttgatgtc 31157846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 6 - 194
Target Start/End: Complemental strand, 8107646 - 8107458
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| || |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  8107646 cgattaaactacccaaacgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatga 8107547  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  8107546 tattgtcgagtgattgtgataatatagtttaaaaagctagaatccgttaatcgatcgagagattgcagctgttacgcttggttgatgtc 8107458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 6 - 194
Target Start/End: Original strand, 23795498 - 23795686
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| || |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  23795498 cgattaaactacccaaacgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatga 23795597  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  23795598 tattgtcgagtgattgtgataatatagtttaaaaagctagaatccgttaatcgatcgagagattgcagctgttacgcttggttgatgtc 23795686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 6 - 194
Target Start/End: Original strand, 2631800 - 2631988
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| || |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| ||    
T  2631800 cgattaaactacccaaacgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatattatttggacacgaatga 2631899  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  2631900 tattgtcgagtgattgtgataatatagtttaaaaagctagaatccgttaatcgatcgagagattgcagctgttacgcttggttgatgtc 2631988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 6 - 170
Target Start/End: Original strand, 22820508 - 22820672
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  22820508 cgattaaattatccaatcgacttcgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatga 22820607  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattg 170  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  22820608 tattgtcgagtgattgtgataatatagtttaaaaagctagaatccgttaatcgatcgagagattg 22820672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 6 - 194
Target Start/End: Original strand, 22909521 - 22909709
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  22909521 cgattaaattatccaatcgactttgtgatcgtttaaatgtttggaaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacaaatga 22909620  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||| |||| || ||||||||||||||||||||    
T  22909621 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatctgttatttgatcgagaaattgcagttgttacgcttggttgatgtc 22909709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 15 - 194
Target Start/End: Original strand, 12191254 - 12191433
Alignment:
Q  15 tatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacgatattgtcga 114  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  12191254 tatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgattgatattgtcga 12191353  T
Q  115 gtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||| || ||||||||||||||||||||    
T  12191354 gtgattgtgataatatcatttaaaaatctagaattcgttaatcgatcgagagattgcagctgttacgcttggttgatgtc 12191433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 6 - 194
Target Start/End: Original strand, 6172919 - 6173107
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| || ||    
T  6172919 cgattaaactatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttaaaaataacgatatcatttggacacaaatga 6173018  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    |||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||||    
T  6173019 tattgttgagtgattatgataatatagtttaaaaagctagaatccgttaatcgatcgagagattgcagctcttacgcttggttgatgtc 6173107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 6 - 194
Target Start/End: Complemental strand, 45500469 - 45500281
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    ||||||||  ||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| |||| ||| ||    
T  45500469 cgattaaacgatccaatcgactttgtggtcgtttaaatgtttgggaaatcgatgtttaaacaatcccttagaaataacgatatcatttagacatgaatga 45500370  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||||    
T  45500369 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccattaatcgatcgagagattgcagctgttacgcttggttgatgtc 45500281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 144; E-Value: 6e-76
Query Start/End: Original strand, 7 - 194
Target Start/End: Original strand, 31882515 - 31882702
Alignment:
Q  7 gattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacgat 106  Q
    ||||||| ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||| |||    
T  31882515 gattaaactatccaatcgaatttgtgattgtttaaatgtttgggaaatcgatgtttaaacgatcccttggaaataacaatatcatttggacacgaatgat 31882614  T
Q  107 attgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| || ||||||||||||||||||||    
T  31882615 attgtcgagtgattgtgataatatcgtttaaaaagttagaattcgttaatcgatcgagagattgcagctgttacgcttggttgatgtc 31882702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 6 - 194
Target Start/End: Original strand, 12184268 - 12184451
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||     ||||||||||| ||    
T  12184268 cgattaaactatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgat-----ttggacacgaatga 12184362  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| || ||||||||||||||||||||    
T  12184363 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatttgttaatcgatcgagagattgcagctgttacgcttggttgatgtc 12184451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 18 - 194
Target Start/End: Complemental strand, 22321547 - 22321371
Alignment:
Q  18 ccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacgatattgtcgagtg 117  Q
    ||||| |||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  22321547 ccaattgactttttgatcgtttaaaagtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatgatattgtcgagtg 22321448  T
Q  118 attgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||    
T  22321447 attgtgataatatagtttaaaaagctagaatctgttaatcgatcgagagattgcagctgttacgcttggttgatgtc 22321371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 30 - 194
Target Start/End: Original strand, 22825036 - 22825200
Alignment:
Q  30 gtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacgatattgtcgagtgattgtgataata 129  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  22825036 gtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataata 22825135  T
Q  130 tcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    | ||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||    
T  22825136 tagtttaaaaagctagaatccgttaatcgatcgagagattgcatctgttacgcttggttgatgtc 22825200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 6 - 190
Target Start/End: Original strand, 1274991 - 1275176
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  1274991 cgattaaactatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacaaatga 1275090  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaat-ccgttaatcgatcgagagattgtaggtgttacgcttggttga 190  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||| | ||||| ||||||| || ||||||||||||||||    
T  1275091 tattgtcgagtgattgtgataatatcgtttaaaatgctagaatcccgttatttgatcgtgagattgcagttgttacgcttggttga 1275176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 6 - 194
Target Start/End: Original strand, 31879003 - 31879190
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||  ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || || ||    
T  31879003 cgattaatctatccaatcgattttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggaaacaaatga 31879102  T
Q  106 tattgtcgagtgattgtgataatatcgttt-aaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  31879103 tattgtc--gtgattgtgataatatcgtttaaaaaagctagaatccgttaatcgatcgagagattgaagctgttacgcttggttgatgtc 31879190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 6 - 194
Target Start/End: Complemental strand, 12090218 - 12090029
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||| | | ||||||||||||||||||||||||||| ||| ||    
T  12090218 cgattaaactatccaatcgactttgtgatcctttaaatgtttgggaaatcgatgtttaaacaacctcttagaaataacgatatcatttggacatgaatga 12090119  T
Q  106 ta-ttgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    || ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| || ||||||||||||||||||||    
T  12090118 tatttgtcgagtgattgtgataatatcgtttaaaaagctagaatacgataatcgatcgagagattgcagctgttacgcttggttgatgtc 12090029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 6 - 191
Target Start/End: Original strand, 24483149 - 24483334
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    ||||||||  ||||||||||||||||||| ||||||||||||||||| ||||  ||||||| |||| ||||||||||||||||||||||||| |||| ||    
T  24483149 cgattaaacgatccaatcgactttgtgattgtttaaatgtttgggaaatcgacatttaaacaatccattagaaataacgatatcatttggacccgaatga 24483248  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgat 191  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| || |||||||||||||||||    
T  24483249 tattgtcgagtgattgtgataatatcgttaaaaaagctagaattcgttaatcgatcgagagattgcagttgttacgcttggttgat 24483334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 6 - 194
Target Start/End: Original strand, 1954331 - 1954518
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    ||||||||  |||||||||||||||||||||| ||||||||| | || |||||||||||| |||||| |||||||||||||||||||||||||| || ||    
T  1954331 cgattaaacgatccaatcgactttgtgatcgtataaatgtttagaaaatcgatgtttaaatgatcccatagaaataacgatatcatttggacactaatga 1954430  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||    
T  1954431 t-ttgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgcagctgttacgcttggtagatgtc 1954518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 6 - 193
Target Start/End: Complemental strand, 31664270 - 31664083
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| ||| ||||||||||| | || ||||||||||||||  | ||||||||||||||| | |||| ||||||||||||||||||||||| || ||    
T  31664270 cgattaaactattcaatcgacttttttattgtttaaatgtttggagaatcgatgtttaaacgacctcttaaaaataacgatatcatttggacacaaatga 31664171  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgt 193  Q
    ||||||| | |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  31664170 tattgtcaaatgattgtgttaatatcgtttaaaaagctagaatccgttaatcgatcgagagattgcaggtgttacgcttggttgatgt 31664083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 6 - 191
Target Start/End: Original strand, 2478064 - 2478249
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    ||||||||  ||||||||||||||||||| |||||||||||||| || || |  |||||||||||||||| |||||||||||||||||||||| ||| ||    
T  2478064 cgattaaacgatccaatcgactttgtgattgtttaaatgtttggaaaatcaacatttaaacgatcccttaaaaataacgatatcatttggacatgaatga 2478163  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgat 191  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||| || |||||||||||||||||    
T  2478164 tgttgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttatttgatcgagaaattgcagctgttacgcttggttgat 2478249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 6 - 191
Target Start/End: Complemental strand, 3544636 - 3544451
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    ||||||||  ||||||||||||||||||| ||||||||||||| ||| ||||  ||||||| ||| |||||||||||| ||||||||||||||  || |     
T  3544636 cgattaaacgatccaatcgactttgtgattgtttaaatgtttgagaaatcgacatttaaacaatctcttagaaataacaatatcatttggacaaaaatgc 3544537  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgat 191  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||| | ||||||||||||| || |||||||||||||||||    
T  3544536 tattgtcgagtgattgtgataatatcgtttaaaaagctataattcgttatttgatcgagagattgcagctgttacgcttggttgat 3544451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 26 - 194
Target Start/End: Complemental strand, 4705116 - 4704948
Alignment:
Q  26 ctttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacgatattgtcgagtgattgtgat 125  Q
    |||||||||||||||||||||| | || ||||| ||||||||||||||||||| ||||||||||||||||||||  | | |||||| |||||||||||||    
T  4705116 ctttgtgatcgtttaaatgttttgaaaatcgatatttaaacgatcccttagaactaacgatatcatttggacacatatggtattgttgagtgattgtgat 4705017  T
Q  126 aatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    |||||||||||||||| |||||||||||| | ||||||||||||| || | ||||||||||||||||||    
T  4705016 aatatcgtttaaaaagttagaatccgttatttgatcgagagattgcagctattacgcttggttgatgtc 4704948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 19471948 - 19471864
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatca 90  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  19471948 cgattaaactatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatca 19471864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 6 - 190
Target Start/End: Complemental strand, 29032552 - 29032368
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    ||||||||| |||| |||||||||||||| ||||||  ||||||||| ||||  ||| ||   ||| |||||||| |||| |||||||||||||| | ||    
T  29032552 cgattaaatgatccgatcgactttgtgattgtttaatagtttgggaaatcgacttttgaatagtccattagaaatcacgacatcatttggacacggatga 29032453  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttga 190  Q
    | |||| ||||||||||||||||||||||||||||||||||||| || | | ||||| |||| || || ||||||||||||||||    
T  29032452 tgttgttgagtgattgtgataatatcgtttaaaaagctagaatctgtaatttgatcgtgagaatgcagttgttacgcttggttga 29032368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 108 - 153
Target Start/End: Complemental strand, 8138992 - 8138948
Alignment:
Q  108 ttgtcgagtgattgtgataatatcgtttaaaaagctagaatccgtt 153  Q
    |||| |||||||||||||||||||| || |||||||||||||||||    
T  8138992 ttgttgagtgattgtgataatatcgatt-aaaagctagaatccgtt 8138948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 161; Significance: 5e-86; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 6 - 194
Target Start/End: Original strand, 3539451 - 3539639
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  3539451 cgattaaactacccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatga 3539550  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  3539551 tattgtcgagtgattgtgataatatagtttaaaaagctagaatccgttaatcgatcgagagattgcagctgttacgcttggttgatgtc 3539639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 6 - 194
Target Start/End: Complemental strand, 24161014 - 24160826
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  24161014 cgattaaactatccaatcgactttgtgatcgtttaaatgtttggggaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatga 24160915  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||||    
T  24160914 tattgtcgaatgattgtgataatatcgtttaaaaagctagaatccattaatcgatcgagagattgcagctgttacgcttggttgatgtc 24160826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 6 - 194
Target Start/End: Original strand, 24879269 - 24879457
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||    
T  24879269 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacaagaatga 24879368  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| || | ||||||||||||||||||    
T  24879369 tattgtcgagcgattgtgataatatcgtttaaaaagctagaatccgttaatcgattgagagattgcagctattacgcttggttgatgtc 24879457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 6 - 194
Target Start/End: Complemental strand, 26515186 - 26514998
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| || |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  26515186 cgattaaactacccaaacgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatga 26515087  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  26515086 tattgtcgagtgattgtgataatatagtttaaaaagctagaatccgttaatcgatcgagagattgcagctgttacgcttggttgatgtc 26514998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 6 - 191
Target Start/End: Original strand, 34914092 - 34914277
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| ||    
T  34914092 cgattaaactatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaatgatcccttagaaataacgatatcatttggacacgaatga 34914191  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgat 191  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| || |||||||||||||||||    
T  34914192 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatctgttaattgatcgagagattgcagctgttacgcttggttgat 34914277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 6 - 191
Target Start/End: Original strand, 14271076 - 14271261
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  14271076 cgattaaactatccaatcgactttgtgatcgtttaaatgtttgggaaattgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatga 14271175  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgat 191  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||| || |||||||||||||||||    
T  14271176 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatctgttaattgatagagagattgcagctgttacgcttggttgat 14271261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 6 - 194
Target Start/End: Complemental strand, 9932563 - 9932375
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| || |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  9932563 cgattaaactacccaaacgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatga 9932464  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||| || ||||||||||||||||||||    
T  9932463 tattgtcgagtgattgtgataatatagtttaataagctagaatccattaatcgatcgagagattgcagctgttacgcttggttgatgtc 9932375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 6 - 190
Target Start/End: Original strand, 25977353 - 25977537
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  25977353 cgattaaactaaccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggaaacgaatga 25977452  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttga 190  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  25977453 tattgtcgagagattgtgataatatagtttaaaaagctagaatccgttaatcgatcgagagattgcagctgttacgcttggttga 25977537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 7 - 191
Target Start/End: Original strand, 1455196 - 1455380
Alignment:
Q  7 gattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacgat 106  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  1455196 gattaaactatccaatcgactttgtgatcgtttaaatgtttgggaaattgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatgat 1455295  T
Q  107 attgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgat 191  Q
    |||||||||||||||||||||||||||| ||||||||||||||  ||||| ||||||||||||| || ||||| |||||||||||    
T  1455296 attgtcgagtgattgtgataatatcgttgaaaaagctagaatctattaattgatcgagagattgcagctgttatgcttggttgat 1455380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 7 - 191
Target Start/End: Original strand, 1466888 - 1467072
Alignment:
Q  7 gattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacgat 106  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  1466888 gattaaactatccaatcgactttgtgatcgtttaaatgtttgggaaattgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatgat 1466987  T
Q  107 attgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgat 191  Q
    |||||||||||||||||||||||||||| ||||||||||||||  ||||| ||||||||||||| || ||||| |||||||||||    
T  1466988 attgtcgagtgattgtgataatatcgttgaaaaagctagaatctattaattgatcgagagattgcagctgttatgcttggttgat 1467072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 6 - 190
Target Start/End: Complemental strand, 13182115 - 13181931
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    ||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| ||    
T  13182115 cgattgaactatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcctttagaaataacgatatcatttggacacgaatga 13182016  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttga 190  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||| ||||||| || ||||||||||||||||    
T  13182015 tattgtcgagtgattgtgataatattgtttaaaaagctagaatccgttatttgatcgtgagattgcagttgttacgcttggttga 13181931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 6 - 193
Target Start/End: Complemental strand, 21596286 - 21596099
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||| | ||||| ||||||||||||||||||||||||| ||    
T  21596286 cgattaaaatatccaatcgactttttgatcgtttaaatgtttgagaaatcgatgtttaaacgacctcttagcaataacgatatcatttggacacgaatga 21596187  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgt 193  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||| |||||||||||    
T  21596186 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgattgagagattgcagctgttacgtttggttgatgt 21596099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 6 - 194
Target Start/End: Original strand, 16698313 - 16698501
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| ||||||||||||||||||||||||||||||||||| || ||||| ||||| ||||||||||||||||||| ||||||||||||||||| ||    
T  16698313 cgattaaactatccaatcgactttgtgatcgtttaaatgtttggaaaatcgatttttaagcgatcccttagaaataacgttatcatttggacacgaatga 16698412  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||  || ||||||||||||||||||||    
T  16698413 tattgtcgagtgattgtgataatatagtttaaaaaggtagaatccattaatcgatcgagagattacagctgttacgcttggttgatgtc 16698501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 6 - 194
Target Start/End: Complemental strand, 32806521 - 32806333
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| |||||||||||| |||||||||||||||||||||| || ||||||||||||||| | |||||||||||||||||||||||||||| || ||    
T  32806521 cgattaaactatccaatcgacgttgtgatcgtttaaatgtttggaaaatcgatgtttaaacgacctcttagaaataacgatatcatttggacacaaatga 32806422  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    |||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||| || ||||||||||| ||||||||    
T  32806421 tattgtcgagcgattgtgataatattgtttaaaaagctagaattcgttaatcgatcgagagattgcagctgttacgcttgattgatgtc 32806333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 132; E-Value: 9e-69
Query Start/End: Original strand, 6 - 169
Target Start/End: Complemental strand, 13173582 - 13173419
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    ||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||    
T  13173582 cgattgaactatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacaatcccttagaaataacgatatcatttggacacgaatga 13173483  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagatt 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||    
T  13173482 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttattggatcgtgagatt 13173419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 16 - 194
Target Start/End: Complemental strand, 5988750 - 5988572
Alignment:
Q  16 atccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacgatattgtcgag 115  Q
    ||||||||||| ||||||   |||||||||||||||| ||||  ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||     
T  5988750 atccaatcgacgttgtgaatatttaaatgtttgggaaatcgacatttaaacaatcccttagaaataacgatatcatttggacacgaatgatattgtcgaa 5988651  T
Q  116 tgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||| ||||||||||||||||||||||||||||||| | ||||||||||||| || |||| |||||||||||||||    
T  5988650 tgattgtaataatatcgtttaaaaagctagaatccgttatttgatcgagagattgcagttgttgcgcttggttgatgtc 5988572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 34006906 - 34007028
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| || |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  34006906 cgattaaactacccaaacgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatga 34007005  T
Q  106 tattgtcgagtgattgtgataat 128  Q
    |||||||||||||||||| ||||    
T  34007006 tattgtcgagtgattgtggtaat 34007028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 6 - 190
Target Start/End: Original strand, 21631587 - 21631771
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    ||||||||  ||| ||||||||||||||| || |||  ||||||||  ||||  ||||||   |||||| ||||| |||| |  ||||||||||||| ||    
T  21631587 cgattaaacgatctaatcgactttgtgattgtgtaatagtttgggatatcgaattttaaatagtcccttggaaatcacgacacaatttggacacgaatga 21631686  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttga 190  Q
    |  ||| ||||||||||||||||||||||||||||| |||||||||||| | ||||||||| ||| || ||||||||||||||||    
T  21631687 tgatgttgagtgattgtgataatatcgtttaaaaagttagaatccgttatttgatcgagaggttgcagttgttacgcttggttga 21631771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 6 - 190
Target Start/End: Complemental strand, 9518204 - 9518020
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    ||||||||  |||| |||||||||||||| ||||||  ||||||||| ||||  ||| |    ||| |||||||| |||| |||||||||||||||| ||    
T  9518204 cgattaaacgatccgatcgactttgtgattgtttaatagtttgggaaatcgacttttgagtagtccattagaaatcacgacatcatttggacacgaatga 9518105  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttga 190  Q
    | ||||  ||||||| || ||||||||||||||||||||||||| |||| | ||| | ||||||| || |||||| |||||||||    
T  9518104 tgttgtttagtgattatgctaatatcgtttaaaaagctagaatctgttatttgattgtgagattgcagttgttacacttggttga 9518020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 6 - 191
Target Start/End: Original strand, 15642822 - 15643005
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaat-gtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacg 104  Q
    ||||||||  |||||||||||||||||||  ||||||| |||||| || ||||  ||||||  |||| |||||||| |||| |||||||||||| ||| |    
T  15642822 cgattaaacgatccaatcgactttgtgattatttaaatagtttggaaaatcgacttttaaataatccattagaaatcacgacatcatttggacaagaatg 15642921  T
Q  105 atattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgat 191  Q
    || |||   ||||||||| ||||||||||||||| || || ||||||||| | |||||| |||||| || ||||| |||||||||||    
T  15642922 atgttg---agtgattgtaataatatcgtttaaagaggtaaaatccgttatttgatcgaaagattgcagttgttatgcttggttgat 15643005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 132 - 194
Target Start/End: Original strand, 8667461 - 8667523
Alignment:
Q  132 gtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  8667461 gtttaaaaagctagaatccgttaatcgatcgagagattgcagctgttacgcttggttgatgtc 8667523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 113 - 191
Target Start/End: Original strand, 26604831 - 26604909
Alignment:
Q  113 gagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgat 191  Q
    |||||||||||||||||| ||||||||||||||||||||||| | | ||| ||||||| || |||||||||||||||||    
T  26604831 gagtgattgtgataatattgtttaaaaagctagaatccgttatttgctcgtgagattgcagctgttacgcttggttgat 26604909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 143 - 194
Target Start/End: Complemental strand, 5670898 - 5670847
Alignment:
Q  143 tagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  5670898 tagaatccgttaatcgatcgagagattgcagctgttacgcttggttgatgtc 5670847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 6 - 194
Target Start/End: Original strand, 7135 - 7323
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  7135 cgattaagttatccaatcgactttgtgatcttttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatga 7234  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  7235 tgttgtcgagtgattgtgataatatagtttaaaaagctagaatccgttaatcgatcgagagattgcagctgttacgcttggttgatgtc 7323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 157; Significance: 1e-83; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 6 - 194
Target Start/End: Original strand, 24836126 - 24836314
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| ||    
T  24836126 cgattaaactacccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaatgatcccttagaaataacgatatcatttggacacgaatga 24836225  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  24836226 tattgtcgagtgattgtgataatatagtttaaaaagctagaatccgttaatcgatcgagagattgcagctgttacgcttggttgatgtc 24836314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 6 - 194
Target Start/End: Original strand, 34456699 - 34456887
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| || |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  34456699 cgattaaactacccaaacgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatga 34456798  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  34456799 tattgtcgagtgattgtgataatatagtttaaaaagctagaatccgttaatcgatcgagagattgcagctgttacgcttggttgatgtc 34456887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 6 - 194
Target Start/End: Original strand, 9404828 - 9405016
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| || |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  9404828 cgattaaactacccaaacgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatga 9404927  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  9404928 tattgttgagtgattgtgataatatagtttaaaaagctagaatccgttaatcgatcgagagattgcagctgttacgcttggttgatgtc 9405016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 6 - 194
Target Start/End: Complemental strand, 11723034 - 11722846
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| || |||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  11723034 cgattaaactacccaaacgactttgtgattgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatga 11722935  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  11722934 tattgtcgagtgattgtgataatatagtttaaaaagctagaatccgttaatcgatcgagagattgcagctgttacgcttggttgatgtc 11722846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 6 - 194
Target Start/End: Original strand, 11767158 - 11767346
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| || |||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  11767158 cgattaaactacccaatcgattttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgaccccttagaaataacgatatcatttggacacgaatga 11767257  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  11767258 tattgtcgagtgattgtgataatatagtttaaaaagctagaatccgttaatcgatcgagagattgcagctgttacgcttggttgatgtc 11767346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 6 - 194
Target Start/End: Complemental strand, 16904367 - 16904179
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| ||    
T  16904367 cgattaaactacccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaatgatcccttagaaataacgatatcatttggacacgaatga 16904268  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  16904267 tattgtcgagtgattgtgataatatagttttaaaagctagaatccgttaatcgatcgagagattgcagctgttacgcttggttgatgtc 16904179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 6 - 194
Target Start/End: Original strand, 33435006 - 33435194
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  33435006 cgattaaactacccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatga 33435105  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||  |||||||||| ||||||||    
T  33435106 tattgtcgagtgattgtgataatatagtttaaaaagctagaatccgttaatcgatcgagagattgcagcagttacgcttgattgatgtc 33435194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 6 - 191
Target Start/End: Original strand, 32227062 - 32227247
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  32227062 cgattaaactatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatga 32227161  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgat 191  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||| |||| |||||||| || |||||||||||||||||    
T  32227162 tattgtcgagtgattgtgataatatcatttaaaaagcaagaatccgttaattgatcaagagattgaagttgttacgcttggttgat 32227247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 6 - 194
Target Start/End: Original strand, 6270294 - 6270482
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||||||| ||    
T  6270294 cgattaaactatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaatgatctcttagaaataacgatatcatttggacacgaatga 6270393  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| || |||||||| |||||||||||    
T  6270394 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcaatcaagagattgcagctgttacgcatggttgatgtc 6270482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 6 - 194
Target Start/End: Complemental strand, 27166856 - 27166668
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| ||    
T  27166856 cgattaaactatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacaatatcatttggacacgaatga 27166757  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |  | ||||||||||||||||||    
T  27166756 tattgtcgagtgattgtgataatatcgtttaaaaagctacaattcgttaatcgatcgagagattgcaacttttacgcttggttgatgtc 27166668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 6 - 194
Target Start/End: Complemental strand, 30606834 - 30606646
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| || |||| |||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||| ||    
T  30606834 cgattaaactacccaaacgactttgtgatcgtttaaatgtttgggaaatcgatatttaaacgatctcttagaaataacgatatcatttggacacgaatga 30606735  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  30606734 tattgtcgagtgattgtgataatatagtttaaaaagctagaatccgttaatcgatcgagagattgcagctgttacgcttggttgatgtc 30606646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 6 - 194
Target Start/End: Original strand, 7315608 - 7315796
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| || |||| |||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||||||||||||||| ||    
T  7315608 cgattaaactacccaaacgactttgtgatcgtttaaatgtttgggaaatcaatgtttaaacgatctcttagaaataacgatatcatttggacacgaatga 7315707  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  7315708 tattgtcgagtgattgtgataatatagtttaaaaagttagaatccgttaatcgatcgagagattgcagctgttacgcttggttgatgtc 7315796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 6 - 194
Target Start/End: Original strand, 14344865 - 14345053
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| || |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||| ||    
T  14344865 cgattaaactacccaaacgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataaagatatcatttgaacacgaatga 14344964  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||||    
T  14344965 tattgtcgagtgattgtgataatatagtttaaaaagctagaatccattaatcgatcgagagattgcagctgttacgcttggttgatgtc 14345053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 6 - 194
Target Start/End: Complemental strand, 34869504 - 34869314
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatccc-ttagaaataacgatatcatttggacacgaacg 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |    
T  34869504 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatccctttagaaataacgatatcatttggacacgaatg 34869405  T
Q  105 atattgtcgagtgattgtgataatatcgttt-aaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||| ||| || |||||| |||||||||||||    
T  34869404 atattgtcgagtgattgtgataatatcgtttaaaaaagctagaatccgttaattaatcgagaggttgcagttgttacacttggttgatgtc 34869314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 6 - 190
Target Start/End: Complemental strand, 37251663 - 37251479
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  37251663 cgattaagctatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatga 37251564  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttga 190  Q
    |||||| |||||||||||||||||| |||||||||||||||||| |||| | ||||| |||||||||| ||||||||||||||||    
T  37251563 tattgttgagtgattgtgataatatagtttaaaaagctagaatctgttatttgatcgtgagattgtagttgttacgcttggttga 37251479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 76 - 194
Target Start/End: Original strand, 31846426 - 31846542
Alignment:
Q  76 gaaataacgatatcatttggacacgaacgatattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggt 175  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || |    
T  31846426 gaaataacgatattatttggacacgaatgatattgtcgagtgattgtgataatatagtttaaaaagctagaatccgttaatcgatcgagagattgcagct 31846525  T
Q  176 gttacgcttggttgatgtc 194  Q
    |  ||||||||||||||||    
T  31846526 g--acgcttggttgatgtc 31846542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 6 - 102
Target Start/End: Original strand, 519433 - 519529
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaa 102  Q
    ||||||||  ||| |||| |||||||||| ||||||||||||||||| ||||   ||||||||||||||||| ||||||||||||||||||||||||    
T  519433 cgattaaacgatcaaatcaactttgtgattgtttaaatgtttgggaaatcgacaattaaacgatcccttagagataacgatatcatttggacacgaa 519529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 153
Target Start/End: Complemental strand, 39655776 - 39655647
Alignment:
Q  24 gactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacgatattgtcgagtgattgtg 123  Q
    |||||| |||| ||||||  ||||||||| ||||  ||| ||   ||| |||||||| |||| ||||||||||||| || ||| |||| |||||||||||    
T  39655776 gactttctgattgtttaatagtttgggaaatcgacttttgaatagtccattagaaatcacgacatcatttggacacaaatgatgttgttgagtgattgtg 39655677  T
Q  124 ataatatcgtttaaaaagctagaatccgtt 153  Q
    |||||| ||||||||||| |||||| ||||    
T  39655676 ataataccgtttaaaaagttagaattcgtt 39655647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 31846383 - 31846426
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgg 49  Q
    |||||||| || ||||||||||||||||||||||||||||||||    
T  31846383 cgattaaactacccaatcgactttgtgatcgtttaaatgtttgg 31846426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 157; Significance: 1e-83; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 6 - 194
Target Start/End: Complemental strand, 46691795 - 46691607
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    ||||||||  |||||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  46691795 cgattaaacgatccaatcaactttgtgatcgtttaaatgtttggaaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatga 46691696  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  46691695 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtagctgttacgcttgattgatgtc 46691607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 8 - 194
Target Start/End: Original strand, 52618908 - 52619094
Alignment:
Q  8 attaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacgata 107  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  52618908 attaaactatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatgata 52619007  T
Q  108 ttgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  52619008 ttgtcgagtgattgtgataatatagattaaaaagatagaatccgttaatcgatcgagagattgcagctgttacgcttggttgatgtc 52619094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 6 - 194
Target Start/End: Complemental strand, 4838894 - 4838706
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| || |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  4838894 cgattaaactacccaaacgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatga 4838795  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||    
T  4838794 tattgtcgagtgattgtgataatatagtttaaaaagctagaatctgttaatcgatcgagagattgcagctgttacgcttggttgatgtc 4838706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 6 - 194
Target Start/End: Original strand, 22048085 - 22048273
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| || |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  22048085 cgattaaactacccaaacgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatga 22048184  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||    
T  22048185 tattgtcgagtgattgtgataatatagtttaaaaagctagaatccgttaatcgatcgagagattgcaactgttacgcttggttgatgtc 22048273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 6 - 194
Target Start/End: Complemental strand, 40995305 - 40995117
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    ||||||||| | ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  40995305 cgattaaatgaaccaatcgactttgtgatcgtttaaatgtttgagaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatga 40995206  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  40995205 tattgtcgagtgattgtgataatattttttaaaaagctagaatccgttaatcgatcgagagattgcagctgttacgcttggttgatgtc 40995117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 6 - 194
Target Start/End: Complemental strand, 42532644 - 42532456
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||    
T  42532644 cgattaaactatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacaatcccttagaaataacgatatcatttggacacgaatga 42532545  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    |||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||| || ||||||||||||||||||||    
T  42532544 tattgtcgagtgattgtgataatatcgtttaaaatgcttgaatcctttaatcgatcgagagattgcagctgttacgcttggttgatgtc 42532456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 9 - 194
Target Start/End: Original strand, 55327179 - 55327363
Alignment:
Q  9 ttaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacgatat 108  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  55327179 ttaaactatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatgatat 55327278  T
Q  109 tgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    |||||||||||||||||||||| || ||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||    
T  55327279 tgtcgagtgattgtgataatat-gtctaaaaagctggaatccgttaatcgatcgagagattgcagttgttacgcttggttgatgtc 55327363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 6 - 194
Target Start/End: Original strand, 323842 - 324030
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| || |||||| || ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| ||    
T  323842 cgattaaactacccaatcaacgttgtgatcgtttaaatgtttgggaaatcaatgtttaaacgatcccttagaaataacgatatcatttggacacgaatga 323941  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  323942 tattgtcgagtgattgtgataatatagtttaaaaagctagaatccgttaatcgatcgagagattgcagctgttacgcttggttgatgtc 324030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 6 - 194
Target Start/End: Complemental strand, 5273320 - 5273132
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| || |||| ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  5273320 cgattaaactacccaaacgactttgtgatcgtttaaatgtttggaaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatga 5273221  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||||||||    
T  5273220 tattgtcgagtgattgtgataatatagtttaaaaagctagaatccgttaatcggtcgagagattgcagctgttacgcttggttgatgtc 5273132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 6 - 194
Target Start/End: Complemental strand, 21677425 - 21677238
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||    
T  21677425 cgattaaactatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacatgaatga 21677326  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || | |||| |||||||||||||    
T  21677325 tattgtcgagt-attgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgcagctattacacttggttgatgtc 21677238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 6 - 194
Target Start/End: Original strand, 26070131 - 26070319
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| |||| ||||||||||||| ||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||    
T  26070131 cgattaaactatctaatcgactttgtggtcgtttaaatgtttgagaaatcgatgttttaacgatcccttagaaataacgatatcatttggacacgaatga 26070230  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||    
T  26070231 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgcagctgttatgcttggttgatgtc 26070319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 6 - 194
Target Start/End: Complemental strand, 21668663 - 21668474
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||    
T  21668663 cgattaaactatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggtcacgaatga 21668564  T
Q  106 tattgtcgagtgattgtgataatatcg-tttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || | |||| |||||||||||||    
T  21668563 tattttcgagtgattgtgataatatcgttttaaaaagctagaatccgttaatcgatcgagagattgcagctattactcttggttgatgtc 21668474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 10 - 194
Target Start/End: Original strand, 1188372 - 1188556
Alignment:
Q  10 taaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacgatatt 109  Q
    |||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| | ||||||    
T  1188372 taaactatccaatcgactttgtgattgtttaaatgtttgggaaatcgatgtttaaacaatcccttagaaataacgatatcatttggacacgtatgatatt 1188471  T
Q  110 gtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| || ||||||||||||||||||||    
T  1188472 gtcgagtgattgtgataatatcgtttaaaaagctagaatctgctaatcgatcgagagattgcagctgttacgcttggttgatgtc 1188556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 6 - 194
Target Start/End: Complemental strand, 19247586 - 19247398
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  19247586 cgattaaactatccaatcaactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggatacgaatga 19247487  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||| || ||||| ||||||||||||||    
T  19247486 tattgtcgagtgattgtgataatatcgtttaaaaagttagaatctgttaatctatcgagagattgcagttgttatgcttggttgatgtc 19247398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 8 - 194
Target Start/End: Complemental strand, 35416452 - 35416266
Alignment:
Q  8 attaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacgata 107  Q
    |||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||| ||||    
T  35416452 attaaactatccaatcgactttatgatcgtttaaatgtttgggaaatcgatgtttaaacgacctcttagaaataacgatatcatttggacacgaatgata 35416353  T
Q  108 ttgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    |||||||||||||||||||||||||||||| ||||||||||  ||||||||||| |||||||| || |||||||||||| |||||||    
T  35416352 ttgtcgagtgattgtgataatatcgtttaacaagctagaatttgttaatcgatcaagagattgcagctgttacgcttggctgatgtc 35416266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 6 - 194
Target Start/End: Complemental strand, 26373389 - 26373201
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    ||||||||  ||||||||||||||||||||||||||| ||||||||| || |||||||||| |||||||||||||||| |||| ||||||||||||| ||    
T  26373389 cgattaaacgatccaatcgactttgtgatcgtttaaacgtttgggaaatcaatgtttaaacaatcccttagaaataacaatataatttggacacgaatga 26373290  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||| || ||||||||||||||||||||    
T  26373289 tattgtcgagtgattgtgatagtatcgtttaaaaagctagaattcgttaatcgatcaagagattgcagttgttacgcttggttgatgtc 26373201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 7 - 192
Target Start/End: Original strand, 42271781 - 42271967
Alignment:
Q  7 gattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacgat 106  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||  |  |||||||||| ||||||||||||||||||| |||    
T  42271781 gattaaactatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacggccttttagaaataatgatatcatttggacacgaatgat 42271880  T
Q  107 attgtcgagtgattgtgataatatcgttt-aaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatg 192  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||| ||| || ||||||||||| ||||||    
T  42271881 attgtcgagtgattgtgataatatcgtttaaaaaagttagaatccgttaattgatcgagaggttgcagctgttacgcttgattgatg 42271967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 6 - 190
Target Start/End: Original strand, 20949149 - 20949334
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaat-gtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacg 104  Q
    ||||||||| ||||||||||||||||| |||||||||| ||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||| |    
T  20949149 cgattaaatgatccaatcgactttgtggtcgtttaaatagtttgggaaatcgacatttaaacgatcccttagaaataacgatatcatttggacacgaatg 20949248  T
Q  105 atattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttga 190  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||| |  |||||||| ||| || ||||||||||||||||    
T  20949249 atattgttgagtgattgtgataatgtcgtttaaaaagctagaatccgttatttaatcgagaggttgcagttgttacgcttggttga 20949334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 16 - 191
Target Start/End: Complemental strand, 30218135 - 30217960
Alignment:
Q  16 atccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacgatattgtcgag 115  Q
    ||||||||||||||||||| ||||||||||||||||| ||||  |||| ||||||| |||||||||||||||||||||||||| ||| ||||||||||||    
T  30218135 atccaatcgactttgtgatagtttaaatgtttgggaaatcgacatttagacgatccattagaaataacgatatcatttggacaggaatgatattgtcgag 30218036  T
Q  116 tgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgat 191  Q
    |||||||||||||||||||||||||| |||||| ||||| | ||||||||||||| || |||||||||||||||||    
T  30218035 tgattgtgataatatcgtttaaaaagttagaattcgttatttgatcgagagattgcagctgttacgcttggttgat 30217960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 60 - 193
Target Start/End: Original strand, 33239375 - 33239508
Alignment:
Q  60 tttaaacgatcccttagaaataacgatatcatttggacacgaacgatattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcga 159  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  33239375 tttaaacaatcccttagaaataacgatatcatttggacacgaatgatattgtcgagtgattgtgataatatagtttaaaaagctagaatccgttaatcga 33239474  T
Q  160 tcgagagattgtaggtgttacgcttggttgatgt 193  Q
    ||||||||||| || |||||||||||||||||||    
T  33239475 tcgagagattgcagctgttacgcttggttgatgt 33239508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 6 - 138
Target Start/End: Complemental strand, 9417191 - 9417059
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||| ||||  ||||||||||||| ||||||||||||||||||||||||||||| ||    
T  9417191 cgattaaatgatccaatcgactttgtgattgtttaaatgtttgggaaatcgacatttaaacgatcccctagaaataacgatatcatttggacacgaatga 9417092  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaa 138  Q
    ||||||||||||||||||||||| ||| |||||    
T  9417091 tattgtcgagtgattgtgataatgtcgattaaa 9417059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 16 - 190
Target Start/End: Original strand, 53895792 - 53895966
Alignment:
Q  16 atccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacgatattgtcgag 115  Q
    ||||||||||||||||||| ||||||  ||||||||| ||||  ||||||   ||| |||||||| |||| |||||||||||||||| ||||||||||||    
T  53895792 atccaatcgactttgtgattgtttaatagtttgggaaatcgacttttaaatagtccattagaaatcacgacatcatttggacacgaatgatattgtcgag 53895891  T
Q  116 tgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttga 190  Q
    ||||||||||||||||||||||||| |||||||| |||| | ||||| ||||||| || ||||| ||||||||||    
T  53895892 tgattgtgataatatcgtttaaaaatctagaatctgttatttgatcgtgagattgcagttgttaggcttggttga 53895966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 6 - 190
Target Start/End: Complemental strand, 33110460 - 33110274
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||  ||||  ||| ||| ||||||||||||| |||| | |||||||||||||| ||    
T  33110460 cgattaaactatccaatcgactttgtgattgtttaaatgtttgggagatcgacatttgaacaatcccttagaaatcacgacaacatttggacacgaatga 33110361  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagaga--ttgtaggtgttacgcttggttga 190  Q
    | |||| |||||||||||||||||| |||||||||||||||||||  || | ||||| ||||  ||| || ||||||||||||||||    
T  33110360 tgttgttgagtgattgtgataatattgtttaaaaagctagaatccaatatttgatcgtgagattttgcagttgttacgcttggttga 33110274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 103 - 184
Target Start/End: Complemental strand, 19731066 - 19730985
Alignment:
Q  103 cgatattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgctt 184  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  19731066 cgatattgtcgagtgattgtgataatatagtttaaaaagctagaatccgttaatcgatcgagagattgcagctgttacgctt 19730985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 44429042 - 44428961
Alignment:
Q  113 gagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||    
T  44429042 gagtgattgtgataatatagtttaaaaagctagaattcgttaatcgatcgagagattgcagctgttacgcttggttgatgtc 44428961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 105 - 191
Target Start/End: Original strand, 6640465 - 6640551
Alignment:
Q  105 atattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgat 191  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| | ||||  ||||||| || |||||||||||||||||    
T  6640465 atattgttgagtgattgtgataatatcgtttaaaaagctagaatccgttatttgatcacgagattgcagttgttacgcttggttgat 6640551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 108 - 153
Target Start/End: Complemental strand, 12097368 - 12097324
Alignment:
Q  108 ttgtcgagtgattgtgataatatcgtttaaaaagctagaatccgtt 153  Q
    |||||||||||||||||||||||||  | |||||||||||||||||    
T  12097368 ttgtcgagtgattgtgataatatcgagt-aaaagctagaatccgtt 12097324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444 (Bit Score: 153; Significance: 3e-81; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 6 - 194
Target Start/End: Complemental strand, 12246 - 12058
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  12246 cgattaaactacccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatga 12147  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||    
T  12146 tattgtcaagtgattgtgataatatagtttaaaaagctagaattcgttaatcgatcgagagattgcagctgttacgcttggttgatgtc 12058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 153; Significance: 3e-81; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 6 - 194
Target Start/End: Complemental strand, 28657 - 28469
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| || |||| ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  28657 cgattaaactacccaaacgactttgtgatcgtttaaatgtttggaaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatga 28558  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  28557 tattgtcgagtgattgtgataatatagtttaaaaagctagaatccgttaatcgatcgagagattgcagctgttacgcttggttgatgtc 28469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 153; Significance: 3e-81; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 6 - 194
Target Start/End: Original strand, 12598 - 12786
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  12598 cgattaaactatccaatcaactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaatga 12697  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||    
T  12698 tattgacgagtgattgtgataatatagtttaaaaagctagaattcgttaatcgatcgagagattgcagctgttacgcttggttgatgtc 12786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0336 (Bit Score: 149; Significance: 7e-79; HSPs: 1)
Name: scaffold0336
Description:

Target: scaffold0336; HSP #1
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 6 - 194
Target Start/End: Original strand, 9146 - 9334
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| || ||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||||| ||    
T  9146 cgattaaactacccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtctaaatgatcccttagaaataacgatatcatttggacacgaatga 9245  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||    
T  9246 tattgtcgagtgattgtgataatatagtttaaaaagctagaatccgttaattgatcgagagattgcagttgttacgcttggttgatgtc 9334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 149; Significance: 7e-79; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 6 - 194
Target Start/End: Complemental strand, 116326 - 116138
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||| ||    
T  116326 cgattaaactatccaatcgactttgtgatcgtttaaatgtttgggaaatcgatgtttaaacaatcccttaaaaataacgatatcatttggacacgaatga 116227  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||||| || ||||||||||||||||||||    
T  116226 tattgtcgagtgattgtgataatattgtttaaaaagttagaatccgttaattgatcgagagattgcagttgttacgcttggttgatgtc 116138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 6 - 194
Target Start/End: Complemental strand, 169166 - 168978
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| || |||||||||||| ||||||||||||||||||| || |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  169166 cgattaaactacccaatcgactttttgatcgtttaaatgtttggaaaatcgatgtttaaatgatcccttagaaataacgatatcatttggacacgaacga 169067  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||    
T  169066 tattatcgagtgattgtgataatatagtttaaaaagctagaatccgttaatcgatcgagagattacagctgttacgcttggttgatgtc 168978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 6 - 194
Target Start/End: Complemental strand, 76210 - 76022
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| ||| |||||||||||||||||||||||||  ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| ||    
T  76210 cgattaaactattcaatcgactttgtgatcgtttaaatcattgggaaatcgttgtttaaacgatcccttagaaataacgatatcatttggacacgaatga 76111  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgatgtc 194  Q
    ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||    
T  76110 tattgtctagtgattgtgataatatcgtttaaaaagctagaattcgttaatcgatcgagagattgtagttgttacgtttggttgatgtc 76022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 121; Significance: 3e-62; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 6 - 190
Target Start/End: Complemental strand, 742 - 558
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    ||||||||  ||||||||||||||||||| |||| |||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||| ||    
T  742 cgattaaacgatccaatcgactttgtgattgttttaatgtttgggaaatcgacatttaaacgatcccttagaaataacgatatcatttggacacgaatga 643  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttga 190  Q
    |||||||||||||||||||||||||  |||||||||||||||||| ||| | ||||| ||||||| || ||||||||||||||||    
T  642 tattgtcgagtgattgtgataatattttttaaaaagctagaatccattatttgatcgtgagattgcagttgttacgcttggttga 558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 118; Significance: 2e-60; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 6 - 190
Target Start/End: Complemental strand, 5105 - 4920
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    |||||||| ||||||||| ||||||||| ||||||||||||  |||| |||||||||||| || | ||||||||||||||||||||||||||||||| ||    
T  5105 cgattaaactatccaatcaactttgtgaacgtttaaatgttaaggaaatcgatgtttaaatgacctcttagaaataacgatatcatttggacacgaatga 5006  T
Q  106 tattgtcgagtgattgtgataatatcgttta-aaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttga 190  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| | ||||| ||||||| || ||||||||||||||||    
T  5005 tattgtcgagtgattgtgataatatcgtttaaaaaagctagaatccgttatttgatcgtgagattgcagttgttacgcttggttga 4920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 118; Significance: 2e-60; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 6 - 190
Target Start/End: Complemental strand, 16231 - 16047
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaat-gtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacg 104  Q
    ||||||||  |||||||||||||||||||||||||||| ||||||||| ||||  |||||||||||||||||||||||||||||||||||||||| || |    
T  16231 cgattaaacgatccaatcgactttgtgatcgtttaaatagtttgggaaatcgacatttaaacgatcccttagaaataacgatatcatttggacacaaatg 16132  T
Q  105 atattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttga 190  Q
    ||||||| |||||||||||||||| |||||||||||| |||||||||||| | ||||||||||||| || ||||||||||||||||    
T  16131 atattgttgagtgattgtgataat-tcgtttaaaaaggtagaatccgttatttgatcgagagattgcagctgttacgcttggttga 16047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 6 - 191
Target Start/End: Original strand, 14589 - 14773
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    ||||||||  ||||||||||||||||||| ||||||  ||||||||| ||||  |||||| | ||| ||| |||| |||| |||||||||||||||| ||    
T  14589 cgattaaacgatccaatcgactttgtgattgtttaatagtttgggaaatcgacttttaaatggtccattataaatcacgacatcatttggacacgaatga 14688  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgat 191  Q
    | ||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||||||||||    
T  14689 tgttgtcgaga-attgtgataatatcgtttaaaaagctagaatccgttaattgatcgagagattgcagctgttacgcttggttgat 14773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 77; Significance: 6e-36; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 6 - 190
Target Start/End: Complemental strand, 35081 - 34897
Alignment:
Q  6 cgattaaattatccaatcgactttgtgatcgtttaaatgtttgggaagtcgatgtttaaacgatcccttagaaataacgatatcatttggacacgaacga 105  Q
    ||||||||  |||| ||||||||||||||  |||||  ||||||||| ||||  ||||||   ||| |||||||| || | |||||||||||||||| ||    
T  35081 cgattaaacgatccgatcgactttgtgattatttaatagtttgggaaatcgacttttaaatagtccattagaaatcacaacatcatttggacacgaatga 34982  T
Q  106 tattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttga 190  Q
    | ||||  ||||||||||||||||| ||||||||||||||||||||||| | ||||| ||||||| || ||||||||||||||||    
T  34981 tgttgtttagtgattgtgataatattgtttaaaaagctagaatccgttatttgatcgtgagattgcagttgttacgcttggttga 34897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 68; Significance: 1e-30; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 104 - 191
Target Start/End: Original strand, 7258 - 7345
Alignment:
Q  104 gatattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgat 191  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| || ||||||||||| |||||    
T  7258 gatattgtcgagtgattgtgataatatcgtttaaaaagctagaatctgttaattgatcgagagattgcagctgttacgcttgattgat 7345  T

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Target: scaffold0306 (Bit Score: 68; Significance: 1e-30; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 104 - 191
Target Start/End: Original strand, 7268 - 7355
Alignment:
Q  104 gatattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgat 191  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| || ||||||||||| |||||    
T  7268 gatattgtcgagtgattgtgataatatcgtttaaaaagctagaatctgttaattgatcgagagattgcagctgttacgcttgattgat 7355  T

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Target: scaffold0152 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 104 - 191
Target Start/End: Original strand, 24879 - 24966
Alignment:
Q  104 gatattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgat 191  Q
    |||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||| || ||||||||||| |||||    
T  24879 gatattgtcgagtgattgtgataatatcgtttaaaaagctagaaactgttaattgatcgagagattgcagctgttacgcttgattgat 24966  T

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Target: scaffold0060 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 105 - 191
Target Start/End: Original strand, 6018 - 6104
Alignment:
Q  105 atattgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgat 191  Q
    ||||||| || ||||| || |||||||||||||| ||||||||| ||||| | ||||| |||||| ||| |||||||||||||||||    
T  6018 atattgttgattgattatggtaatatcgtttaaagagctagaattcgttatttgatcgtgagattatagttgttacgcttggttgat 6104  T

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Target: scaffold0458 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0458
Description:

Target: scaffold0458; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 191
Target Start/End: Complemental strand, 6940 - 6857
Alignment:
Q  108 ttgtcgagtgattgtgataatatcgtttaaaaagctagaatccgttaatcgatcgagagattgtaggtgttacgcttggttgat 191  Q
    |||| |||||||||||||||| |||||| || | |||||||  |||| | ||||  ||||||| || |||||||||||||||||    
T  6940 ttgttgagtgattgtgataatgtcgtttgaagatctagaatatgttatttgatcatgagattgcagttgttacgcttggttgat 6857  T

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