View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0342_2D_low_3 (Length: 1621)
Name: NF0342_2D_low_3
Description: NF0342_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0342_2D_low_3 |
 | |
|
| [»] scaffold0144 (3 HSPs) |
| | |
|
| [»] scaffold0133 (7 HSPs) |
| | |
|
| [»] scaffold0256 (3 HSPs) |
| | |
|
| [»] scaffold0511 (2 HSPs) |
| | |
|
| [»] scaffold0230 (3 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 1194; Significance: 0; HSPs: 21)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 1194; E-Value: 0
Query Start/End: Original strand, 53 - 1610
Target Start/End: Original strand, 16656332 - 16657889
Alignment:
| Q |
53 |
caggtaattccttgagtttggcaaatttggatatggaaagtgccttaagattattgttgttaacaatggacttcaataactcttcatttcctcctttagc |
152 |
Q |
| |
|
|||||||||| ||||||||| ||||| ||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
16656332 |
caggtaattcaatgagtttggaaaattcagatatggaaagtgacttaagattactgttgttaacaatagacttcaataactcttcatttcctcctttagc |
16656431 |
T |
|
| Q |
153 |
agaaagtgatttaacagatggaatgggtggcaatgtaagtttgggaacattttttatatcaaagtgaaaaagttgtggtagcatctccactccttcgact |
252 |
Q |
| |
|
| |||||||||||||||||| || ||||||||||||||||||||| |||||| ||||||| || | |||||||||||||||||||| |||||||||||| |
|
|
| T |
16656432 |
aaaaagtgatttaacagatgcaaggggtggcaatgtaagtttggggacatttcttatatctaaatttaaaagttgtggtagcatctctactccttcgact |
16656531 |
T |
|
| Q |
253 |
tccaacaccctctctaaatttggtaggtcatgcaaagtcaaatctttcaatgacgtaaaagccttctcggtcgcaggttcatacaagtcatcatcaatgt |
352 |
Q |
| |
|
||||| ||||||||||||||||||| | | | ||||||||| | |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
16656532 |
tccaaaaccctctctaaatttggtaagcctttcaaagtcaactttttcaatgacgtaaaagccttctcagtcgcaggttcatacaaatcatcatcaatgt |
16656631 |
T |
|
| Q |
353 |
acattagatctcccattccagatataaaaagagtagttaaacatggtaatttaccaaatgaaggaagctgcctgcagtttttacaatcaaagagaataat |
452 |
Q |
| |
|
|| ||| ||||| ||||||||||| | ||||| || ||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||| |
|
|
| T |
16656632 |
actttatatctctcattccagatacataaagaatatctaaacatggtaatttaccaaatggaggaagctgcctgcagtttttacagtcatagagaataat |
16656731 |
T |
|
| Q |
453 |
acgaactagacctttcaaaatagaagtatttttcatccaatgagaaaaatatgttcccccataaccatccaccccaacatgcttaagtcctgaatgaggc |
552 |
Q |
| |
|
|| ||||| |||| | | ||||||||||||| |||||||| ||| ||| | ||||||| ||||||||||||||||| |||||||||||||||||| ||| |
|
|
| T |
16656732 |
actaactaaacctcttagaatagaagtatttctcatccaacgaggaaattgtgttcccatataaccatccaccccaatatgcttaagtcctgaatggggc |
16656831 |
T |
|
| Q |
553 |
tcaagagcttcaagtactcgctcagcatgaacaccactaacttgtgaatcaccccatgacaaatataggtgattcaggtctttcttgccaatcaaattag |
652 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||| | |||| | ||||||||||||||||||||||| |
|
|
| T |
16656832 |
tcaagagcttcaagtactcgctcagcatgaacaccactaacttttgaatgatcccatgacaaatataagcgatttaagtctttcttgccaatcaaattag |
16656931 |
T |
|
| Q |
653 |
cttttctagcatcctcctcatttgacacattctcaaggcctttgatgtatagcttacctcctaattgtaagttgtgtagctctgctaaaccaaacccagt |
752 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16656932 |
cttttctagcatcctcctcaattgacacattctcaaggcctttgatgtatagcttgcctcctaattgtaagttgtgtagctctgctaaaccaaacccagt |
16657031 |
T |
|
| Q |
753 |
ttttgaatcaactatgaaattggtcaatgtttggagactagttaactccccaattttaaaaggagttgatttcaatgatggacaaccttcaataatgaga |
852 |
Q |
| |
|
|| | || |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| |
|
|
| T |
16657032 |
ttctaaaccaactatgaaatagttcaatgtttggagactagttaactccccaattttaaaaggagttgatttcaatgatggacaacttttaataatgaga |
16657131 |
T |
|
| Q |
853 |
tgtcgaaggtcctgcaattttgtgaattgttttggaaaactagataaaaaataacaactttgaagtttaagtgtttgcaatttttgatgtttacaaaaag |
952 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
16657132 |
tgtcgaaggtcctgcaattttgtgaattgttttggaaaactagataaaaaataacaacttagaagtttaagtgtttgcaatttttgaagtttacaaaaag |
16657231 |
T |
|
| Q |
953 |
acgcaggcaaggttgtgatatcacttgcgtaaagaaccaagtacctcaaatgtattaaattattcaatgacgagagttgataagaacttgtatataaagc |
1052 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||| |
|
|
| T |
16657232 |
acgcaggcaaggttgtgatatcacttccgtaaagaaccaagtacctcaaatgtattaaattcttcaatgacgagagttgataagaacttatacataaagc |
16657331 |
T |
|
| Q |
1053 |
tcggagaggagtgcttgatagcaacgcatctaaattcttgcaaggtcgcgtatactcaaggaaagttcgcaaggaatcaactttttggaagggaatcatg |
1152 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16657332 |
tcggagaggagtgcttgatagaaacgcatctaaattcttgcaaggtcgcgtatactcaaggaaagttcgcaaggaatcaactttttggaagggaatcatg |
16657431 |
T |
|
| Q |
1153 |
tagtcatcttttgatttgttatcacacaggctgaaatggtgaactctaattggcaagtttgtcaactttgaaacatcacaagagacacattcttctccca |
1252 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16657432 |
tagtcatcttttgatttgttatcacacaggctgatatggtgaactctaattggcaaattagtcaactttgaaacatcacaagagacacattcttctccca |
16657531 |
T |
|
| Q |
1253 |
taatagactgagctaaatcatggactaaatcatgcattttgaatataatgttacctgctaaatctgatttgacttcttgaaaaaatgacctttgatataa |
1352 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
16657532 |
taatagactgagctaaatcatggactaaatcatgcattttaaatgtaatgttacctactaaatctgattcgacttcttgaaaaaatgacctttgatataa |
16657631 |
T |
|
| Q |
1353 |
ttcattccatacctcattaccaacatgctccatctgcaagtttcctctagatgcaacaagtccattagccatccaaagttgaatgagatcttccttcacc |
1452 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||||| |||||||| || |
|
|
| T |
16657632 |
ttcattccatacctcattaccaacatgctccatctgtaagtttcctctagatataacaagtccattagccatccaaagtttaatgagttcttccttatcc |
16657731 |
T |
|
| Q |
1453 |
atttcaaaatccttaggaaaaacagcacaaaaagtaaaacatggcctcaatgacaatttcaagttaaagtagctcagtctcaaagcagacatgacttggt |
1552 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
16657732 |
atttcaaaatccttaggaaaaacagcacaaaaagtaaaacatggcctcaatgacaatttcaagttaaagtagctcagtctcaaagcagacatgacatggt |
16657831 |
T |
|
| Q |
1553 |
tatcatcagctaaattccaaaactcactttccaccacagaaatccattgatgtccatc |
1610 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
16657832 |
tatcatcagctaaattccaaaactcactttccaccacagaaatccattgatgttcatc |
16657889 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 910; E-Value: 0
Query Start/End: Original strand, 54 - 1605
Target Start/End: Original strand, 16795484 - 16797041
Alignment:
| Q |
54 |
aggtaattccttgagtttggcaaatttggatatggaaagtgccttaagattattgttgttaacaatggacttcaataactcttcatttcctcctttagca |
153 |
Q |
| |
|
|||||||||||||||| |||||||||| ||||| |||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||| |
|
|
| T |
16795484 |
aggtaattccttgagtctggcaaattttaatatgtaaagtgatttaagattactgttgttaacaatagacttcaataactcttcatttcctccttcagca |
16795583 |
T |
|
| Q |
154 |
gaaagtgatttaacagatggaatgggtggcaatgtaagtttgggaacattttttatatcaaagtgaaaaagttgtggtagcatctccactccttcgactt |
253 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| || | |||||||||||||||||||| |||||||| |||| |
|
|
| T |
16795584 |
caaagtgatttaacagatggaaggggtggcaatgtaagtttgggaacatttcttatatctaactctaaaagttgtggtagcatctctactccttcaactt |
16795683 |
T |
|
| Q |
254 |
ccaacaccctctctaaatttggtaggtcatgcaaagtcaaatctttcaatgacgtaaaagccttctcggtcgcaggttcatacaagtcatcatcaatgta |
353 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
16795684 |
ccaacaccctctctaaatttggtaggtcatgcagagtcaaatctttcaatgacgtaaaagccttctcggtcgcaggttcatacaaatcatcatcaatgta |
16795783 |
T |
|
| Q |
354 |
cattagatctcccattccagatataaaaagagtagttaaacatggtaatttaccaaatgaaggaagctgcctgcagtttttacaatcaaagagaataata |
453 |
Q |
| |
|
| ||| ||| ||||||||||| ||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||| |
|
|
| T |
16795784 |
ctttaaatcattcattccagatacaaaaagaatatttaaacatggtaatttaccaaataaaggaagctgcctgcagtttttacagtcagagagaataata |
16795883 |
T |
|
| Q |
454 |
cgaactagacctttcaaaatagaagtatttttcatccaatgagaaaaatatgttcccccataaccatccaccccaacatgcttaagtcctgaatgaggct |
553 |
Q |
| |
|
||||||||| ||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
16795884 |
cgaactagatttttcagaatagaagtatttttcatccaatgaggaaaatctgttcccccataaccatccaccccaacatgcttaagtcctgaatggggct |
16795983 |
T |
|
| Q |
554 |
caagagcttcaagtactcgctcagcatgaacaccactaacttgtgaatcaccccatgacaaatataggtgattcaggtctttcttgccaatcaaattagc |
653 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||||||||| |
|
|
| T |
16795984 |
caagagcttcaagtactcgctcagcatgaactccactaacttgtgcatcaccccatgacaaatataggtgatttaagtctttcttgccaatcaaattagc |
16796083 |
T |
|
| Q |
654 |
ttttctagcatcctcctcatttgacacattctcaaggcctttgatgtatagcttacctcctaattgtaagttgtgtagctctgctaaaccaaacccagtt |
753 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16796084 |
ttttctagcatcctcctcatttaacacattctcaaggcctttgatgtatagcctgcctcctaattgtaagttgtgtagctctgctaaaccaaacccagtt |
16796183 |
T |
|
| Q |
754 |
tttgaatcaactatgaaattggtcaatgtttggagactagttaactccccaattttaaaaggagttgatttcaatgatggacaaccttcaataatgagat |
853 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||| ||| ||||||| |
|
|
| T |
16796184 |
tttgaatcaactatgaaattggtcaatgtttgcagactagataactccccaattctaaaaggagttgatttcaatgatggacaatctttaattatgagat |
16796283 |
T |
|
| Q |
854 |
gtcgaaggtcctgcaattttgtgaattgttttggaaaactagataaaaaataacaactttgaagtttaagtgtttgcaatttttgatgtttacaaaaaga |
953 |
Q |
| |
|
|||||||||||||||||||| |||||||||| ||||||||||| |||||||| ||| || ||||||||||||||||||||| || || |||||| ||| |
|
|
| T |
16796284 |
gtcgaaggtcctgcaattttttgaattgtttgggaaaactagagaaaaaatagcaatgttcaagtttaagtgtttgcaatttctgcagtctacaaacaga |
16796383 |
T |
|
| Q |
954 |
cgcaggcaaggttgtgatatcacttgcgtaaagaaccaagtacctcaaatgtattaaattattcaatgacgagagttgataagaacttgtatataaagct |
1053 |
Q |
| |
|
|||||||||||||||||||| || | ||| ||| |||||||||||| |||||||||||| |||||||| |||| |||| ||||||||||| ||||||| |
|
|
| T |
16796384 |
cgcaggcaaggttgtgatataacattcgttaagttccaagtacctcacatgtattaaattcttcaatgaagagaattgacaagaacttgtacgtaaagct |
16796483 |
T |
|
| Q |
1054 |
cggagaggagtgcttgatagcaacgcatctaaat---tcttgcaaggtcgcgtatactcaaggaaagttcgcaaggaatcaactttttggaagggaatca |
1150 |
Q |
| |
|
||||||||| | ||||| ||||| ||||||||| | || ||| | || | ||||| || ||||||||||| |||||||||| ||| ||||||| |
|
|
| T |
16796484 |
cggagaggaacgattgatggcaacacatctaaatttatggtggtgggtggtttaaattcaagaaaggttcgcaaggattcaacttttttgaaaggaatca |
16796583 |
T |
|
| Q |
1151 |
---tgtagtcatcttttgatttgttatcacacaggctgaaatggtgaactctaattggcaagtttgtcaactttgaaacatcacaagagacacattcttc |
1247 |
Q |
| |
|
|||||||| ||||| ||| | || | || | ||||||||||||| ||| || || || || || | | ||| ||| ||||||||||| |
|
|
| T |
16796584 |
tgttgtagtcaaattttgttttagaaacaaagcaacttatatggtgaactctacttgacagattagttaagctttcagcctcataagccacacattcttc |
16796683 |
T |
|
| Q |
1248 |
tcccataatagactgagctaaatcatggactaaatcatgcattttgaatataatgttacctgctaaatctgatttgacttcttgaaaaaatgacctttga |
1347 |
Q |
| |
|
| |||||| ||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16796684 |
taccataacagacttagctaaatcatgcactaaatcatgcattttgaatgtaatgttacctgctaaatctgatttgacttcttgaaaaaatgacctttgg |
16796783 |
T |
|
| Q |
1348 |
tataattcattccatacctcattaccaacatgctccatctgcaagtttcctctagatgcaacaagtccattagccatccaaagttgaatgagatcttcct |
1447 |
Q |
| |
|
|||||||||| ||||| | |||||||||||||||||||||| || || |||||||||| |||||||||||||||||||||||| |||||||||| ||||| |
|
|
| T |
16796784 |
tataattcatcccatatcccattaccaacatgctccatctgtaaattacctctagatgtaacaagtccattagccatccaaagatgaatgagatgttcct |
16796883 |
T |
|
| Q |
1448 |
tcaccatttcaaaatccttaggaaaaacagcacaaaaagtaaaacatggcctcaatgacaatttcaagttaaagtagctcagtctcaaagcagacatgac |
1547 |
Q |
| |
|
||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |
|
|
| T |
16796884 |
tcaccatttcaaaatccttaggaaaaacagcgcagaaagtaaaacatggcctcaatgacaatttcaagttaaagtagcttagtgtcaaagcagacatgat |
16796983 |
T |
|
| Q |
1548 |
ttggttatcatcagctaaattccaaaactcactttccaccacagaaatccattgatgt |
1605 |
Q |
| |
|
| | | | | || |||||||||||| |||||||||| |||||||||||||||||| |
|
|
| T |
16796984 |
acgatcaacctgaggtaaattccaaaattcactttccagtacagaaatccattgatgt |
16797041 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 707; E-Value: 0
Query Start/End: Original strand, 106 - 1605
Target Start/End: Original strand, 16985821 - 16987326
Alignment:
| Q |
106 |
ttgttgttaacaatggacttcaataactcttcatttcctcctttagcagaaagtgatttaacagatggaatgggtggcaatgtaagtttgggaacatttt |
205 |
Q |
| |
|
||||||| | ||||| |||| ||||| |||||||||||||||| | | |||||||| | ||||||||||| || ||| ||||||| ||| | | ||| |
|
|
| T |
16985821 |
ttgttgtaaccaatgaacttaaataagtcttcatttcctccttgaaccgaaagtgactcaacagatggaagggatggaaatgtaaatttagaggcttttg |
16985920 |
T |
|
| Q |
206 |
ttatatcaaagtgaaaaagttgtggtagcatctccactccttcgacttccaacaccctctctaaatttggtaggtcatgcaaagtcaaatctttcaatga |
305 |
Q |
| |
|
||||||| || | |||||||||| ||||||||| ||||||||||||| |||||||||| ||||||| ||| || | ||||||||| | ||||| || |
|
|
| T |
16985921 |
ttatatctaactctaaaagttgtgttagcatctctactccttcgacttttaacaccctctttaaattttgtaagttgtacaaagtcaatttcttcaaaga |
16986020 |
T |
|
| Q |
306 |
cgtaaaagccttctcggtcgcaggttcatacaagtcatcatcaatgtacattagatctcccattccagatataaaaagagtagttaaacatggtaattta |
405 |
Q |
| |
|
|||||| |||| || ||||||||||||||||| ||||||||||||||| ||| ||||| |||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
16986021 |
tgtaaaaaccttgtcagtcgcaggttcatacaaatcatcatcaatgtactttaaatctctcatttcagatataaaaagagtagttaaacatggtaattta |
16986120 |
T |
|
| Q |
406 |
ccaaatgaaggaagctgcctgcagtttttacaatcaaagagaataatacgaactagacctttcaaaatagaagtatttttcatccaatgagaaaaatatg |
505 |
Q |
| |
|
||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||||||| | |||||||||||||||||||||||||| ||||| || |
|
|
| T |
16986121 |
ccaaatggaggaagctgcctgcagtttttacagccaaagagaataatactaactagaccttttagaatagaagtatttttcatccaatgaggaaaatctg |
16986220 |
T |
|
| Q |
506 |
ttcccccataaccatccaccccaacatgcttaagtcctgaatgaggctcaagagcttcaagtactcgctcagcatgaacaccactaacttgtgaat---- |
601 |
Q |
| |
|
|||| |||||||||| |||||||| |||||||||||||||||| |||||||| ||||| ||||| ||| ||| |||||| | ||||||||||| |
|
|
| T |
16986221 |
ttccaccataaccattcaccccaaaatgcttaagtcctgaatggggctcaagtgcttccagtac---ctctacatcaacaccgccaacttgtgaattagc |
16986317 |
T |
|
| Q |
602 |
-----caccccatgacaaatataggtgattcaggtctttcttgccaatcaaattagcttttctagcatcctcctcatttgacacattctcaaggcctttg |
696 |
Q |
| |
|
|||||||||||||||||| | ||| | ||| ||||| |||||||||||||||| | |||||||||| | ||||||||||||||||||||||||| |
|
|
| T |
16986318 |
atcatcaccccatgacaaatataagctatttaagtccttctttccaatcaaattagcttctttagcatcctctttatttgacacattctcaaggcctttg |
16986417 |
T |
|
| Q |
697 |
atgtatagcttacctcctaattgtaagttgtgtagctctgctaaaccaaacccagtttttgaatcaactatgaaattggtcaatgtttggagactagtta |
796 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||| | || ||||| |
|
|
| T |
16986418 |
atgtatagcttgcctcctaattgtaagttgtgtagctctgctaaaccaaacccagtttctaaaccaactatgaaattggtcaatgttttcaaacaagtta |
16986517 |
T |
|
| Q |
797 |
actccccaattttaaaaggagttgatttcaatgatggacaaccttcaataatgagatgtcgaaggtcctgcaattttgtgaattgttttggaaaactaga |
896 |
Q |
| |
|
|||||| |||| |||||||||||||| ||||||| || ||| ||| ||| ||||||||||||||||||| ||||||||| |||||||| ||||||||||| |
|
|
| T |
16986518 |
actccctaattctaaaaggagttgatatcaatgacgggcaatctttaatcatgagatgtcgaaggtccttcaattttgtaaattgtttgggaaaactaga |
16986617 |
T |
|
| Q |
897 |
taaaaaataacaactttgaagtttaagtgtttgcaatttttgatgtttacaaaaagacgcaggcaaggttgtgatatcacttgcgtaaagaaccaagtac |
996 |
Q |
| |
|
||||||| |||| || |||||| |||||||| ||||| || || |||||| ||| ||||||| |||||||| |||| | | |||| ||||||| |
|
|
| T |
16986618 |
taaaaaaacacaatcttcaagttttagtgtttgtaatttctgcagtctacaaacagaaccaggcaaagttgtgatgtcacaagaggaaagtttcaagtac |
16986717 |
T |
|
| Q |
997 |
ctcaaatgtattaaattattcaatgacgagagttgataagaacttgtatataaagctcggagaggagtgcttgatagcaacgcatctaaattcttgcaag |
1096 |
Q |
| |
|
|||||||| |||||| | |||||||| || ||||||| ||||||||||| ||||||||| |||||||| ||||||| | ||||| |||||||||| | | |
|
|
| T |
16986718 |
ctcaaatgcattaaactcttcaatgatgatagttgatgagaacttgtatgtaaagctcgaagaggagtttttgatagtagcgcatttaaattcttggagg |
16986817 |
T |
|
| Q |
1097 |
gtcgcgtatactcaaggaaagttcgcaaggaatcaactttttggaagggaatcatgtagtcatcttttgatttgttatcacacaggctgaaatggtgaac |
1196 |
Q |
| |
|
|| | |||||||||| || |||||||||||||||||||||||| ||||||||||||| |||| ||||||||| |||||| | || || | ||||||||| |
|
|
| T |
16986818 |
gttgtttatactcaagaaaggttcgcaaggaatcaactttttggcagggaatcatgtaatcatgttttgattttttatcaaagagactcatatggtgaac |
16986917 |
T |
|
| Q |
1197 |
tctaattggcaagtttgtcaactttgaaacatcacaagagacacattcttctcccataatagactgagctaaatcatggactaaatcatgcattttgaat |
1296 |
Q |
| |
|
|||||||| ||| || |||||||||||||||||| |||| | ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| |
|
|
| T |
16986918 |
tctaattgacaaattagtcaactttgaaacatcataagaaatacattcttctcccataatagattgagctaaatcatggataaaatcatgcattttgaat |
16987017 |
T |
|
| Q |
1297 |
ataatgttacctgctaaatctgatttgacttcttgaaaaaatgacctttgatataattcattccatacctcattaccaacatgctccatctgcaagtttc |
1396 |
Q |
| |
|
|||||||||||| |||||| ||||| ||||||||||||||||| ||||| |||||| |||||||||||||| |||||||||||||||||| || || | |
|
|
| T |
16987018 |
gtaatgttacctgttaaatcagatttaacttcttgaaaaaatgatctttgccataattgattccatacctcatcaccaacatgctccatctgtaaattac |
16987117 |
T |
|
| Q |
1397 |
ctctagatgcaacaagtccattagccatccaaagttgaatgagatcttccttcaccatttcaaaatccttaggaaaaacagcacaaaaagtaaaacatgg |
1496 |
Q |
| |
|
||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |
|
|
| T |
16987118 |
ctctagatgtaacaagtccattagccatccaaagatgaatgagatcttccttcaccatttcaaaatccttaggaaaaacagcacagaaggtaaaacatgg |
16987217 |
T |
|
| Q |
1497 |
cctcaatgacaatttcaagttaaagtagctcagtctcaaagcagacatgacttggttatcatcagctaaattccaaaactcactttccaccacagaaatc |
1596 |
Q |
| |
|
||| | ||||||||||| ||| |||||||| |||||||||||||| |||| | | ||| |||| ||||||||||| ||||||||||| ||||||||| |
|
|
| T |
16987218 |
ccttagtgacaatttcatgttgaagtagcttagtctcaaagcagaaatgataggatcatcctcaggtaaattccaaatctcactttccagtacagaaatc |
16987317 |
T |
|
| Q |
1597 |
cattgatgt |
1605 |
Q |
| |
|
||||||||| |
|
|
| T |
16987318 |
cattgatgt |
16987326 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 674; E-Value: 0
Query Start/End: Original strand, 105 - 1610
Target Start/End: Original strand, 17067866 - 17069383
Alignment:
| Q |
105 |
attgttgttaacaatggacttcaataactcttcatttcctcctttagcagaaagtgatttaacagatggaatgggtggcaatgtaagtttgggaacattt |
204 |
Q |
| |
|
|||||||| || ||||||||||| |||||||||||||||||||| | || ||||||| | |||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
17067866 |
attgttgtaaataatggacttcattaactcttcatttcctccttgaacaaaaagtgactcgacagatggaatgggtggcaatgtaagtttggggacattt |
17067965 |
T |
|
| Q |
205 |
tttatatcaaagtgaaaaagttgtggtagcatctccactccttcgacttccaacaccctctctaaatttggtaggtcatgcaaagtcaaatctttcaatg |
304 |
Q |
| |
|
|||||| || | |||||||||| ||||||||| ||||||| ||||| |||||||||||||||||||||| || ||||||||| | ||||||| |
|
|
| T |
17067966 |
cttatatttaactttaaaagttgtgttagcatctctactcctttgacttttaacaccctctctaaatttggtaagttgcacaaagtcaatttcttcaatg |
17068065 |
T |
|
| Q |
305 |
acgtaaaagccttctcggtcgcaggttcatacaagtcatcatcaatgtacattagatctcccattccagatataaaaagagtagttaaacatggtaattt |
404 |
Q |
| |
|
| ||||| ||||| || ||||||| ||||||||| ||||||||||||||| ||| ||| || |||||||| | |||||| |||||| ||||||||||| |
|
|
| T |
17068066 |
atgtaaacgccttgtcagtcgcagattcatacaaatcatcatcaatgtactttatatcgttcaatccagatagagaaagagcagttaagcatggtaattt |
17068165 |
T |
|
| Q |
405 |
accaaatgaaggaagctgcctgcagtttttacaatcaaagagaataatacgaactagacctttcaaaatagaagtatttttcatccaatgagaaaaatat |
504 |
Q |
| |
|
|||||||| ||||||||||||||| |||||||| ||| | |||||||||| ||||||||| |||| || ||||||| ||||||||||||||| ||||| | |
|
|
| T |
17068166 |
accaaatggaggaagctgcctgcaatttttacagtcataaagaataatactaactagaccattcagaaaagaagtaattttcatccaatgaggaaaattt |
17068265 |
T |
|
| Q |
505 |
gttcccccataaccatccaccccaacatgcttaagtcctgaatgaggctcaagagcttcaagtactcgctcagcatgaacaccactaacttgtgaat--- |
601 |
Q |
| |
|
||||| |||||||||| |||||||| |||||||||||||||||| | |||||||||||| |||||||||||||||| |||||| | ||||| ||||| |
|
|
| T |
17068266 |
gttccaccataaccattcaccccaaaatgcttaagtcctgaatgggactcaagagcttccagtactcgctcagcatcaacaccgccaacttttgaattag |
17068365 |
T |
|
| Q |
602 |
------caccccatgacaaatataggtgattcaggtctttcttgccaatcaaattagcttttctagcatcctcctcatttgacacattctcaaggccttt |
695 |
Q |
| |
|
|||||||||||||||||| | ||| | ||| ||||||||| |||||||||||||| |||||||||| || || |||||||||| ||||||||| |
|
|
| T |
17068366 |
cttcatcaccccatgacaaatataagctatttaagtccttcttgccattcaaattagcttttttagcatcctcttctttcgacacattctgaaggccttt |
17068465 |
T |
|
| Q |
696 |
gatgtatagcttacctcctaattgtaagttgtgtagctctgctaaaccaaacccagtttttgaatcaactatgaaattggtcaatgtttggagactagtt |
795 |
Q |
| |
|
||||| |||||| ||||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
17068466 |
gatgtgtagcttgcctcctaattgtaagttttgtagctctgctaaaccataaccagtttttgaatcaactatgaaattggtcaatgttttcagactagtt |
17068565 |
T |
|
| Q |
796 |
aactccccaattttaaaaggagttgatttcaatgatggacaaccttcaataatgagatgtcgaaggtcctgcaattttgtgaattgttttggaaaactag |
895 |
Q |
| |
|
|||||||||||| |||||||| |||||||||||||| ||||| ||| ||| |||||||||||||||||||||||||| ||||||||| |||||||||| |
|
|
| T |
17068566 |
aactccccaattctaaaaggacttgatttcaatgattgacaatctttaatcatgagatgtcgaaggtcctgcaatttgttgaattgttcgggaaaactag |
17068665 |
T |
|
| Q |
896 |
ataaaaaataacaactttgaagtttaagtgtttgcaatttttgatgtttacaaaaagacgcaggcaaggttgtgatatcacttgcgtaaagaaccaagta |
995 |
Q |
| |
|
| ||| || | ||| || ||||||||||||||||| ||| || ||||||||| ||||||||||||||||||||| ||||| |||||| ||||||| |
|
|
| T |
17068666 |
agaaataagagcaatattcaagtttaagtgtttgcagtttatgcagtttacaaacagacgcaggcaaggttgtgatgccacttctgtaaagttccaagta |
17068765 |
T |
|
| Q |
996 |
cctcaaatgtattaaattattcaatgacgagagttgataagaacttgtatataaagctcggagaggagtgcttgatagcaacgcatctaaattcttgcaa |
1095 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||| || | |||||||||||||| | || | ||||||||| ||||| || | ||| | |
|
|
| T |
17068766 |
cctcaaatgtattaaattcttcaatgacgagagttgataagaacctgaacgtaaagctcggagagaaatgatcgatagcaacacatctgaacttttgtag |
17068865 |
T |
|
| Q |
1096 |
ggtcgcgtatactcaaggaaagttcgcaaggaatcaactttttggaagggaatcatgtagtcatc---ttttgatttgttatcaca-caggctgaaatgg |
1191 |
Q |
| |
|
| | | || ||||| || ||||||||||| |||||||||| ||| |||||||||| || ||| |||| ||| ||||| | || || | |||| |
|
|
| T |
17068866 |
gttggtttaagttcaagaaaggttcgcaaggattcaacttttttgaaaggaatcatgttgtaatcaaattttctcttggtatcaaagcaacct-atatgg |
17068964 |
T |
|
| Q |
1192 |
tgaactctaattggcaagtttgtcaa-ctttgaaacatcacaagagacacattcttctcccataatagactgagctaaatcatggactaaatcatgcatt |
1290 |
Q |
| |
|
||| ||||| ||| || || || || |||| | | ||| ||| |||||||||||||| |||| ||||| |||||||||||||||||||||||||||| |
|
|
| T |
17068965 |
tgagctctagttgacagattagttaagcttttaggc-tcagaagccacacattcttctccaataacagacttagctaaatcatggactaaatcatgcatt |
17069063 |
T |
|
| Q |
1291 |
ttgaatataatgttacctgctaaatctgatttgacttcttgaaaaaatgacctttgatataattcattccatacctcattaccaacatgctccatctgca |
1390 |
Q |
| |
|
|| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||| | |
|
|
| T |
17069064 |
ttaaatgtaatgttacctgctaaatctgatttgacttcttgaaaaaatgacctttggtataattcatcccatatctcattaccaacatgctccatctgta |
17069163 |
T |
|
| Q |
1391 |
agtttcctctagatgcaacaagtccattagccatccaaagttgaatgagatcttccttcaccatttcaaaatccttaggaaaaacagcacaaaaagtaaa |
1490 |
Q |
| |
|
| || |||||||||| ||||| |||||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||| |||| |||||||| |
|
|
| T |
17069164 |
aattacctctagatgtaacaaatccattagccatccaaagatgaatgagcctttccttcaccattacaaaatccttaggaaaaacaacacagaaagtaaa |
17069263 |
T |
|
| Q |
1491 |
acatggcctcaatgacaatttcaagttaaagtagctcagtctcaaagcagacatgacttggttatcatcagctaaattccaaaactcactttccaccaca |
1590 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
17069264 |
acatggcctcaatgacaatttcaagttatagtagcttagtctcaaagcagacatgacagggttctcatcgtctaaattccaaaactcactttccaccaca |
17069363 |
T |
|
| Q |
1591 |
gaaatccattgatgtccatc |
1610 |
Q |
| |
|
||||||||||||||| |||| |
|
|
| T |
17069364 |
gaaatccattgatgttcatc |
17069383 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 661; E-Value: 0
Query Start/End: Original strand, 105 - 1605
Target Start/End: Original strand, 16786328 - 16787839
Alignment:
| Q |
105 |
attgttgttaacaatggacttcaataactcttcatttcctcctttagcagaaagtgatttaacagatggaatgggtggcaatgtaagtttgggaacattt |
204 |
Q |
| |
|
|||||||| || |||||||||||||||||||||||||| ||| |||||| |||||| | |||| |||||| || | || |||||| ||||| |||||| |
|
|
| T |
16786328 |
attgttgtaaaaaatggacttcaataactcttcatttcttccactagcagtaagtgactcaacatatggaagggacgacagtgtaagcttggggacattt |
16786427 |
T |
|
| Q |
205 |
tttatatcaaagtgaaaaagttgtggtagcatctccactccttcgacttccaacaccctctctaaatttggtaggtcatgcaaagtcaaatc--tttcaa |
302 |
Q |
| |
|
|||||| || | ||| ||||||| |||||||| |||||||| ||||||||||||||||| |||||||||| || ||||||||||||| ||| || |
|
|
| T |
16786428 |
attatatttaacttcaaaggttgtggcagcatctctactccttcaacttccaacaccctctcgaaatttggtaagttatgcaaagtcaaaaaaatttgaa |
16786527 |
T |
|
| Q |
303 |
tgacgtaaaagccttctcggtcgcaggttcatacaagtcatcatcaatgtacattagatctcccattccagatataaaaagagtagttaaacatggtaat |
402 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||| |||| ||||| | ||||| ||||||||||||||||| |
|
|
| T |
16786528 |
tgacataaaagccttctcagtcgcaggttcatacaagtcatcatcaatgtactttatatctctcattttagatacataaagaatagttaaacatggtaat |
16786627 |
T |
|
| Q |
403 |
ttaccaaatgaaggaagctgcctgcagtttttacaatcaaagagaataatacgaactagacctttcaaaatagaagtatttttcatccaatgagaaaaat |
502 |
Q |
| |
|
|||||||||| ||||| ||||||||| |||||||| || |||||||||||| ||||| |||||| | ||||||||||||| |||||||| ||| ||||| |
|
|
| T |
16786628 |
ttaccaaatggaggaaactgcctgcaatttttacagccatagagaataatactaactaaaccttttagaatagaagtatttctcatccaaagaggaaaat |
16786727 |
T |
|
| Q |
503 |
atgttcccccataaccatccaccccaacatgcttaagtcctgaatgaggctcaagagcttcaagtactcgctcagcatgaacaccactaacttgtgaat- |
601 |
Q |
| |
|
| ||||||||||||||| |||||||| ||||||||| |||||||||||||||||||| || |||||||||||||||| |||||||||||||||||||| |
|
|
| T |
16786728 |
gtattcccccataaccattcaccccaaaatgcttaagacctgaatgaggctcaagagcatccagtactcgctcagcatcaacaccactaacttgtgaatt |
16786827 |
T |
|
| Q |
602 |
--------caccccatgacaaatataggtgattcaggtctttcttgccaatcaaattagcttttctagcatcctcctcatttgacacattctcaaggcct |
693 |
Q |
| |
|
|||||||||||||||||| | |||| | ||| |||||||||||||||||||| | |||||||| ||| ||||| || |||||||||||| || |
|
|
| T |
16786828 |
agcataaccaccccatgacaaatataagcgatttaagtccttcttgccaatcaaattagcgtctctagcatgctcttcattcgatacattctcaaggact |
16786927 |
T |
|
| Q |
694 |
ttgatgtatagcttacctcctaattgtaagttgtgtagctctgctaaaccaaacccagtttttgaatcaactatgaaattggtcaatgtttggagactag |
793 |
Q |
| |
|
||||||| ||| || |||||||||| || |||| |||||| ||||||||| | ||||||||||||||||| |||||| ||| | |||||| |||| || |
|
|
| T |
16786928 |
ttgatgtgtagatttcctcctaattataggttgcatagctcggctaaaccataaccagtttttgaatcaacaatgaaaatggaccatgttttcagacaag |
16787027 |
T |
|
| Q |
794 |
ttaactccccaattttaaaaggagttgatttcaatgatggacaaccttcaataatgagatgtcgaaggtcctgcaattttgtgaattgttttggaaaact |
893 |
Q |
| |
|
| |||| ||||||||||||||||| ||| ||||||| | ||| || ||| ||||||||||||||||||| ||||| | | |||||||| |||||||| |
|
|
| T |
16787028 |
tgaacttcccaattttaaaaggagatgacatcaatgaatggcaatttttaatcatgagatgtcgaaggtccttcaattctatcaattgtttaggaaaact |
16787127 |
T |
|
| Q |
894 |
agataaaaaataacaactttgaagtttaagtgtttgcaatttttgatgtttacaaaaagacgcaggcaaggttgtgatatcacttgcgtaaagaaccaag |
993 |
Q |
| |
|
|||| ||||| ||||| || |||||| |||||||||||||| || || |||||| ||| | || ||| ||||||| |||| || || ||||| |
|
|
| T |
16787128 |
ggatagaaaatgacaacgttcaagttttagtgtttgcaatttctgcagtctacaaacagaacctggtaagattgtgatgggactttggttgagttccaag |
16787227 |
T |
|
| Q |
994 |
tacctcaaatgtattaaattattcaatgacgagagttgataagaacttgtatataaagctcggagaggagtgcttgatagcaacgcatctaaattcttgc |
1093 |
Q |
| |
|
|||||||| || |||||| | ||||||| |||||||||| | |||||| || ||||||||| ||||| ||||| ||||||||| || ||| |||||| |
|
|
| T |
16787228 |
tacctcaagtgaattaaactcatcaatgatgagagttgatgaaaacttgcatgtaaagctcgaagaggggtgctagatagcaacatatttaagttcttgg |
16787327 |
T |
|
| Q |
1094 |
aaggtcgcgtatactcaaggaaagttcgcaaggaatcaactttttggaagggaatcatgtagtcatcttttgatttgttatcacacaggctgaaatggtg |
1193 |
Q |
| |
|
||||| | |||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | || || | |||||| |
|
|
| T |
16787328 |
aaggtggtttatactcaagaaaggttcgcaaggaatcaaatttttggaagggaatcatgtagtcatcttttgatttgttatcaaagagacttatatggtg |
16787427 |
T |
|
| Q |
1194 |
aactctaattggcaagtttgtcaactttgaaacatcacaagagacacattcttctcccataatagactgagctaaatcatggactaaatcatgcattttg |
1293 |
Q |
| |
|
||||||||||| || || ||||||||||| |||||| |||| | ||||||||||||||||| ||||||| |||||||||||| ||||||||||||||| |
|
|
| T |
16787428 |
aactctaattgaaaaattagtcaactttgagacatcataagaaatacattcttctcccataaaagactgacctaaatcatggataaaatcatgcattttg |
16787527 |
T |
|
| Q |
1294 |
aatataatgttacctgctaaatctgatttgacttcttgaaaaaatgacctttgatataattcattccatacctcattaccaacatgctccatctgcaagt |
1393 |
Q |
| |
|
||| |||||||||| | ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||| |
|
|
| T |
16787528 |
aatgtaatgttaccaacaaaatctgatttaacttcttgaaaaaatgacctttggtataattcattccatacctcattaccaacatcctccatctgtaagt |
16787627 |
T |
|
| Q |
1394 |
ttcctctagatgcaacaagtccattagccatccaaagttgaatgagatcttccttcaccatttcaaaatccttaggaaaaacagcacaaaaagtaaaaca |
1493 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||| || || |||||||| |
|
|
| T |
16787628 |
ttcctctagatgtaacaagtccattagccatccaaagatgaatgagattttccttcaccatttcaaaatccttgggaaaaacagcgcagaaggtaaaaca |
16787727 |
T |
|
| Q |
1494 |
tggcctcaatgacaatttcaagttaaagtagctcagtctcaaagcagacatgacttggttatcatcagctaaattccaaaactcactttccaccacagaa |
1593 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| ||||||||| ||||||||| | | ||| |||| ||||||||||||||||||||||| |||||| |
|
|
| T |
16787728 |
tggcctcaaggacaatttcaagttaaagtagcttagtctcaaaacagacatgataggatcatcctcagttaaattccaaaactcactttccagtacagaa |
16787827 |
T |
|
| Q |
1594 |
atccattgatgt |
1605 |
Q |
| |
|
|||||||||||| |
|
|
| T |
16787828 |
atccattgatgt |
16787839 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 614; E-Value: 0
Query Start/End: Original strand, 53 - 1062
Target Start/End: Complemental strand, 16869832 - 16868823
Alignment:
| Q |
53 |
caggtaattccttgagtttggcaaatttggatatggaaagtgccttaagattattgttgttaacaatggacttcaataactcttcatttcctcctttagc |
152 |
Q |
| |
|
||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| |||||| ||||||||||||||||||||||||||| ||||||| ||| |
|
|
| T |
16869832 |
caggtaattccatgagtctggcaaatttggatatgtgaagtgacttaagattactgttgtcaacaatggacttcaataactcttcattgcctccttcagc |
16869733 |
T |
|
| Q |
153 |
agaaagtgatttaacagatggaatgggtggcaatgtaagtttgggaacattttttatatcaaagtgaaaaagttgtggtagcatctccactccttcgact |
252 |
Q |
| |
|
| ||| ||||||||||||||||| ||||||||||||||||||||| |||||| |||||| || | |||||||||||||||||||| |||||||||||| |
|
|
| T |
16869732 |
ataaaatgatttaacagatggaaggggtggcaatgtaagtttggggacatttcttatatgtaactttaaaagttgtggtagcatctctactccttcgact |
16869633 |
T |
|
| Q |
253 |
tccaacaccctctctaaatttggtaggtcatgcaaagtcaaatctttcaatgacgtaaaagccttctcggtcgcaggttcatacaagtcatcatcaatgt |
352 |
Q |
| |
|
|||||||||||||||||||| ||||||||| ||||||||| | |||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |
|
|
| T |
16869632 |
tccaacaccctctctaaattcggtaggtcacgcaaagtcatttttttcaatgacgtaaaagccttctcagtcgcaggttcatacatgtcatcatcaatgt |
16869533 |
T |
|
| Q |
353 |
acattagatctcccattccagatataaaaagagtagttaaacatggtaatttaccaaatgaaggaagctgcctgcagtttttacaatcaaagagaataat |
452 |
Q |
| |
|
|| ||| ||| ||||||||||| ||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||| |
|
|
| T |
16869532 |
actttaaatcattcattccagatacaaaaagaatatttaaacatggtaatttaccaaatggaggaagctgcctgcagtttttacagtcagagagaataat |
16869433 |
T |
|
| Q |
453 |
acgaactagacctttcaaaatagaagtatttttcatccaatgagaaaaatatgttcccccataaccatccaccccaacatgcttaagtcctgaatgaggc |
552 |
Q |
| |
|
|||||||| |||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||| |||||||| |||||| || ||| |
|
|
| T |
16869432 |
acgaactaaacctttcagaatagaagtatttttcatccaatgaggaaaatctgttcccccataaccttccaccccaaaatgcttaattcctgactggggc |
16869333 |
T |
|
| Q |
553 |
tcaagagcttcaagtactcgctcagcatgaacaccactaacttgtgaatcaccccatgacaaatataggtgattcaggtctttcttgccaatcaaattag |
652 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| | |||| | ||| ||||| ||||||||||||| |
|
|
| T |
16869332 |
tcaagagcttcaagtactcgcttagcatgaacaccactaactcttgaatcaccccatgacaaatataagcgatttaagtccttctttccaatcaaattag |
16869233 |
T |
|
| Q |
653 |
cttttctagcatcctcctcatttgacacattctcaaggcctttgatgtatagcttacctcctaattgtaagttgtgtagctctgctaaaccaaacccagt |
752 |
Q |
| |
|
||| ||||||||| || || || |||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
16869232 |
cttctctagcatcatcttcgttcgacacattctcaagacctttgatgtatagcttgcctcctaattgtaacttgtgtagctctgctaaaccaaacccagt |
16869133 |
T |
|
| Q |
753 |
ttttgaatcaactatgaaattggtcaatgtttggagactagttaactccccaattttaaaaggagttgatttcaatgatggacaaccttcaataatgaga |
852 |
Q |
| |
|
||||||| |||| |||||||||||||||||||| |||||||||||||| |||||| | ||||||||||||||||||||||||||| ||||||| |||||| |
|
|
| T |
16869132 |
ttttgaaccaaccatgaaattggtcaatgtttgcagactagttaactctccaattctgaaaggagttgatttcaatgatggacaatcttcaatcatgaga |
16869033 |
T |
|
| Q |
853 |
tgtcgaaggtcctgcaattttgtgaattgttttggaaaactagataaaaaataacaactttgaagtttaagtgtttgcaatttttgatgtttacaaaaag |
952 |
Q |
| |
|
||||||||||||||||||||| |||||||||| ||||||||||| ||||||| ||| || || | |||||||||||||||| || ||||||||| || |
|
|
| T |
16869032 |
tgtcgaaggtcctgcaattttttgaattgtttgggaaaactagagaaaaaattgcaagattcaattctaagtgtttgcaatttctgcagtttacaaatag |
16868933 |
T |
|
| Q |
953 |
acgcaggcaaggttgtgatatcacttgcgtaaagaaccaagtacctcaaatgtattaaattattcaatgacgagagttgataagaacttgtatataaagc |
1052 |
Q |
| |
|
|||| |||||||||||||||||||| || |||| ||||| ||||||||||||||||||| |||||||| ||||||||| | ||||||||| |||||| |
|
|
| T |
16868932 |
acgcgggcaaggttgtgatatcactatcgcaaagtaccaacaacctcaaatgtattaaattcttcaatgatgagagttgaaatgaacttgtagctaaagc |
16868833 |
T |
|
| Q |
1053 |
tcggagagga |
1062 |
Q |
| |
|
|||||||||| |
|
|
| T |
16868832 |
tcggagagga |
16868823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 364; E-Value: 0
Query Start/End: Original strand, 120 - 1065
Target Start/End: Original strand, 16779552 - 16780507
Alignment:
| Q |
120 |
ggacttcaataactcttcatttcctcctttagcagaaagtgatttaacagatggaatgggtggcaatgtaagtttgggaacattttttatatcaaagtga |
219 |
Q |
| |
|
|||||||||||| |||||||||||||| || |||||||||| | |||||||||| || |||||| |||||| || |||| | |||||| || | |
|
|
| T |
16779552 |
ggacttcaataattcttcatttcctccactaacagaaagtgactccacagatggaagggactgcaatgcaagtttagggacatctgttatatgtaacttc |
16779651 |
T |
|
| Q |
220 |
aaaagttgtggtagcatctccactccttcgacttccaacaccctctctaaatttggtaggtcatgcaaagtcaaatctttcaatgacgtaaaagccttct |
319 |
Q |
| |
|
|||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| ||||||||| | |||||||||| |||||||||||| |
|
|
| T |
16779652 |
aaaagttggggtagcatctctactccttcgacttccaacaccttctctaaatttggtaagtcacacaaagtcaactttttcaatgacataaaagccttct |
16779751 |
T |
|
| Q |
320 |
cggtcgcaggttcatacaagtcatcatcaatgtacattagatctcccattccagatataaaaagagtagttaaacatggtaatttaccaaatgaaggaag |
419 |
Q |
| |
|
| || ||||||||||| |||||||||||||||||| ||| ||||| ||||||||||| | ||| ||||||||||||||||||||||||||| |||||| |
|
|
| T |
16779752 |
cagttgcaggttcatagaagtcatcatcaatgtactttatatctctcattccagatacatgaaggttagttaaacatggtaatttaccaaatggaggaag |
16779851 |
T |
|
| Q |
420 |
ctgcctgcagtttttacaatcaaagagaataatacgaactagacctttcaaaatagaagtatttttcatccaatgagaaaaatatgttcccccataacca |
519 |
Q |
| |
|
|||||||||||||||||| || ||| ||||||| |||||| |||||| | ||||||||||||| |||||||| ||| ||| | ||||||| | ||| |
|
|
| T |
16779852 |
ctgcctgcagtttttacagccatagaaaataatatgaactaaaccttttagaatagaagtatttctcatccaaggaggaaattgtgttcccataaaactc |
16779951 |
T |
|
| Q |
520 |
tccaccccaacatgcttaagtcctgaatgaggctcaagagcttcaagtactcgctcagcatgaacaccactaacttgtgaat---------caccccatg |
610 |
Q |
| |
|
| |||||||| | |||||| ||||||||||||||||||||||| ||||||||||| |||| |||||||| ||||||||||| ||||||||| |
|
|
| T |
16779952 |
tgcaccccaaaactcttaagacctgaatgaggctcaagagcttccagtactcgctcggcatcaacaccaccaacttgtgaattagcataaccaccccatg |
16780051 |
T |
|
| Q |
611 |
acaaatataggtgattcaggtctttcttgccaatcaaattagcttttctagcatcctcctcatttgacacattctcaaggcctttgatgtatagcttacc |
710 |
Q |
| |
|
||||||||| | |||| | ||| |||||||||||||||||||||||||| |||||||| ||||| |||| |||| |||||||||||||| |||||| || |
|
|
| T |
16780052 |
acaaatataagcgatttaagtccttcttgccaatcaaattagcttttcttgcatcctcttcattcaacactttctgaaggcctttgatgtgtagcttgcc |
16780151 |
T |
|
| Q |
711 |
tcctaattgtaagttgtgtagctctgctaaaccaaacccagtttttgaatcaactatgaaattggtcaatgtttggagactagttaactccccaatttta |
810 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||| |||||||| |||| |||||| | |||||||||| |||| |||||||||||||||| || |
|
|
| T |
16780152 |
tcctaattgcaagttgtgtagctctgctaaaccaaacccattttttgaaccaacaatgaaagtagtcaatgttttcagacaagttaactccccaattcta |
16780251 |
T |
|
| Q |
811 |
aaaggagttgatttcaatgatggacaaccttcaataatgagatgtcgaaggtcctgcaattttgtgaattgttttggaaaactagataaaaaataacaac |
910 |
Q |
| |
|
|||||||||||| ||||| | ||| | ||||| ||||||| |||||| ||||||| ||| |||||||| ||||||||||| | | ||| ||||| |
|
|
| T |
16780252 |
aaaggagttgatgtcaatctctggcaagcaataataacaagatgtctaaggtcatgcaattgtgtcaattgtttcggaaaactagaaagataatcacaac |
16780351 |
T |
|
| Q |
911 |
tttgaagtttaagtgtttgcaattt-ttgatgtttacaaaaagacgcaggcaaggttgtgatatcacttgcgtaaagaaccaagtacctcaaatgtatta |
1009 |
Q |
| |
|
|| ||||||||||||||||||||| | | | |||||| |||||||||||||||| | |||||||| |||||| ||||||||| |||||| |||| |
|
|
| T |
16780352 |
cttcaagtttaagtgtttgcaatttctggcaatctacaaacagacgcaggcaaggtttttatatcactcttgtaaagttccaagtaccgcaaatgcatta |
16780451 |
T |
|
| Q |
1010 |
aattattcaatgacgagagttgataagaacttgtatataaagctcggagaggagtg |
1065 |
Q |
| |
|
|||| ||||||| ||||| ||| |||| |||||| ||||||||||||||||||| |
|
|
| T |
16780452 |
aattcttcaatgcagagagatgacaagaccttgtacgtaaagctcggagaggagtg |
16780507 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 304; E-Value: 1e-170
Query Start/End: Original strand, 1239 - 1610
Target Start/End: Complemental strand, 16868655 - 16868284
Alignment:
| Q |
1239 |
acattcttctcccataatagactgagctaaatcatggactaaatcatgcattttgaatataatgttacctgctaaatctgatttgacttcttgaaaaaat |
1338 |
Q |
| |
|
|||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||| |
|
|
| T |
16868655 |
acattcttctccaataacagacttagctaaatcatggactaaatcatgcattttgaatgtaatgttacctactaaatctgatttgatttcttgaaaaaat |
16868556 |
T |
|
| Q |
1339 |
gacctttgatataattcattccatacctcattaccaacatgctccatctgcaagtttcctctagatgcaacaagtccattagccatccaaagttgaatga |
1438 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
16868555 |
gacctttgatataattcattccatacctcattaccaacatgctccatctgtaagtttcctctagatgtaacaagtccattagccatccaaagttgaatga |
16868456 |
T |
|
| Q |
1439 |
gatcttccttcaccatttcaaaatccttaggaaaaacagcacaaaaagtaaaacatggcctcaatgacaatttcaagttaaagtagctcagtctcaaagc |
1538 |
Q |
| |
|
| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16868455 |
aaaattccttttccatttcaaaatccttaggaaaaacagcacaaaaagtaaaacatggcctcaatgacaatttcaagttaaagtagctcagtctcaaagc |
16868356 |
T |
|
| Q |
1539 |
agacatgacttggttatcatcagctaaattccaaaactcactttccaccacagaaatccattgatgtccatc |
1610 |
Q |
| |
|
||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |||| |
|
|
| T |
16868355 |
agacatgacatggttatcatctgctaaattccaaaactcactttccaccacagaagtccattgatgttcatc |
16868284 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 245; E-Value: 1e-135
Query Start/End: Original strand, 1261 - 1605
Target Start/End: Original strand, 16780627 - 16780971
Alignment:
| Q |
1261 |
tgagctaaatcatggactaaatcatgcattttgaatataatgttacctgctaaatctgatttgacttcttgaaaaaatgacctttgatataattcattcc |
1360 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||| ||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
16780627 |
tgagctaaatcatggactaaatcatgcattttgaatgtaatgttacctacaaaatctgatttaacttcttgaaaaaatgacctttggtataattcattcc |
16780726 |
T |
|
| Q |
1361 |
atacctcattaccaacatgctccatctgcaagtttcctctagatgcaacaagtccattagccatccaaagttgaatgagatcttccttcaccatttcaaa |
1460 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
16780727 |
atacctcattaccaacatgctccatctgtaagtttcctctagatgtaacaagtccattagccatccaaagttgaatgagattttccttcaccatttcaaa |
16780826 |
T |
|
| Q |
1461 |
atccttaggaaaaacagcacaaaaagtaaaacatggcctcaatgacaatttcaagttaaagtagctcagtctcaaagcagacatgacttggttatcatca |
1560 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||||| ||||||||||||||||||| ||||||| ||| |
|
|
| T |
16780827 |
atccttaggaaaaacagcacaaaaagtaaaacacggccttaaggacaaattcaaattaaagtagcttagtctcaaagcagacatgatagggttatcctca |
16780926 |
T |
|
| Q |
1561 |
gctaaattccaaaactcactttccaccacagaaatccattgatgt |
1605 |
Q |
| |
|
| ||| ||||||| |||||||||| ||||||| |||||||||| |
|
|
| T |
16780927 |
gataacttccaaagctcactttcctttacagaaagccattgatgt |
16780971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 100; E-Value: 1e-48
Query Start/End: Original strand, 1239 - 1546
Target Start/End: Complemental strand, 18806851 - 18806544
Alignment:
| Q |
1239 |
acattcttctcccataatagactgagctaaatcatggactaaatcatgcattttgaatataatgttacctgctaaatctgatttgacttcttgaaaaaat |
1338 |
Q |
| |
|
|||||||||||| |||| ||||||||||||||||| | ||||||||||||||||||| ||| | ||| | ||| | ||| ||||||||||||||| |
|
|
| T |
18806851 |
acattcttctcctgtaatggactgagctaaatcatgaattaaatcatgcattttgaatgtaacctcaccctttttatcagtttttacttcttgaaaaaat |
18806752 |
T |
|
| Q |
1339 |
gacctttgatataattcattccatacctcattaccaacatgctccatctgcaagtttcctctagatgcaacaagtccattagccatccaaagttgaatga |
1438 |
Q |
| |
|
|| || ||||||||||||||| || || | |||||||||||||| || || ||||| || | | | ||||||||||| |||||| || || | |
|
|
| T |
18806751 |
gatctcgcatataattcattccacacttcttgaccaacatgctccacctctaaatttccaacggaagagatgaatccattagccaaccaaagatggatca |
18806652 |
T |
|
| Q |
1439 |
gatcttccttcaccatttcaaaatccttaggaaaaacagcacaaaaagtaaaacatggcctcaatgacaatttcaagttaaagtagctcagtctcaaagc |
1538 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||| |||||||| ||||||||||| ||||||||| | |
|
|
| T |
18806651 |
gttcttccttcaccatttcaaaatccttaggaaaaaccgcacaaaaagtaaaacacagcctcagtgataatttcaaattaaagtagctgagtctcaaaac |
18806552 |
T |
|
| Q |
1539 |
agacatga |
1546 |
Q |
| |
|
|||||||| |
|
|
| T |
18806551 |
agacatga |
18806544 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 100; E-Value: 1e-48
Query Start/End: Original strand, 1239 - 1546
Target Start/End: Complemental strand, 18873845 - 18873538
Alignment:
| Q |
1239 |
acattcttctcccataatagactgagctaaatcatggactaaatcatgcattttgaatataatgttacctgctaaatctgatttgacttcttgaaaaaat |
1338 |
Q |
| |
|
|||||||||||| |||| ||||||||||||||||| | ||||||||||||||||||| ||| | ||| | ||| | ||||||||||||||||||| |
|
|
| T |
18873845 |
acattcttctcctgtaatggactgagctaaatcatgaattaaatcatgcattttgaatgtaacctcaccctttttatcagttttgacttcttgaaaaaat |
18873746 |
T |
|
| Q |
1339 |
gacctttgatataattcattccatacctcattaccaacatgctccatctgcaagtttcctctagatgcaacaagtccattagccatccaaagttgaatga |
1438 |
Q |
| |
|
|| || ||||||||||||||| || || | |||||||||||||| || || ||||| || | | | ||||||||||| |||||| || || | |
|
|
| T |
18873745 |
gatctcgcatataattcattccacacttcttgaccaacatgctccacctctaaatttccaacggaagagatgaatccattagccaaccaaagatggatca |
18873646 |
T |
|
| Q |
1439 |
gatcttccttcaccatttcaaaatccttaggaaaaacagcacaaaaagtaaaacatggcctcaatgacaatttcaagttaaagtagctcagtctcaaagc |
1538 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||| |||||||| ||||||||||| |||||||| | |
|
|
| T |
18873645 |
gttcttccttcaccatttcaaaatccttaggaaaaaccgcacaaaaagtaaaacacagcctcagtgataatttcaaattaaagtagctgagtctcaatac |
18873546 |
T |
|
| Q |
1539 |
agacatga |
1546 |
Q |
| |
|
|||||||| |
|
|
| T |
18873545 |
agacatga |
18873538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 95; E-Value: 1e-45
Query Start/End: Original strand, 1269 - 1511
Target Start/End: Original strand, 16843342 - 16843584
Alignment:
| Q |
1269 |
atcatggactaaatcatgcattttgaatataatgttacctgctaaatctgatttgacttcttgaaaaaatgacctttgatataattcattccatacctca |
1368 |
Q |
| |
|
|||||||| || |||||||||||||||| ||| |||||| || || || || |||||||||||||||||| || || |||| ||||||||| |||||| |
|
|
| T |
16843342 |
atcatggaatatatcatgcattttgaatgtaactttaccttcttcatgtgtttcgacttcttgaaaaaatgatctctggtatagttcattccacacctca |
16843441 |
T |
|
| Q |
1369 |
ttaccaacatgctccatctgcaagtttcctctagatgcaacaagtccattagccatccaaagttgaatgagatcttccttcaccatttcaaaatccttag |
1468 |
Q |
| |
|
|| ||||| | |||||||| || |||||||| || | || || |||||| ||||||||||| ||||| | |||||||||||||||| ||||||| |||| |
|
|
| T |
16843442 |
ttgccaacctcctccatctctaaatttcctctggaggaaataaatccatttgccatccaaagatgaattacatcttccttcaccattacaaaatctttag |
16843541 |
T |
|
| Q |
1469 |
gaaaaacagcacaaaaagtaaaacatggcctcaatgacaattt |
1511 |
Q |
| |
|
|||| ||||||||||| |||||||||||| ||||||| ||||| |
|
|
| T |
16843542 |
gaaatacagcacaaaatgtaaaacatggcttcaatgataattt |
16843584 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 73; E-Value: 1e-32
Query Start/End: Original strand, 221 - 493
Target Start/End: Original strand, 16842287 - 16842559
Alignment:
| Q |
221 |
aaagttgtggtagcatctccactccttcgacttccaacaccctctctaaatttggtaggtcatgcaaagtcaaatctttcaatgacgtaaaagccttctc |
320 |
Q |
| |
|
||||||||| | ||||||||||||||| ||| ||||||||||||||||||||| | |||||||| |||| | || ||||||| ||||||||||| |
|
|
| T |
16842287 |
aaagttgtgacaacatctccactccttcagctttcaacaccctctctaaatttggcaaatcatgcaacgtcattttctttaatgacggaaaagccttctt |
16842386 |
T |
|
| Q |
321 |
ggtcgcaggttcatacaagtcatcatcaatgtacattagatctcccattccagatataaaaagagtagttaaacatggtaatttaccaaatgaaggaagc |
420 |
Q |
| |
|
||||||| |||||||| |||||| ||||||||| ||| ||||| |||| || ||| | ||||||| |||||||| ||||||||||||| || |||||| |
|
|
| T |
16842387 |
ggtcgcaccttcatacatgtcatcgtcaatgtactttacatctctcattgcatatacataaagagtggttaaacaaggtaatttaccaagtgggggaagc |
16842486 |
T |
|
| Q |
421 |
tgcctgcagtttttacaatcaaagagaataatacgaactagacctttcaaaatagaagtatttttcatccaat |
493 |
Q |
| |
|
|| ||||||| ||| | | |||| |||| | ||||| |||| ||||||||||||||| ||||||||| |
|
|
| T |
16842487 |
cgctgacagttttcacagttatagagtataacatcaactaacccttctaaaatagaagtatttctcatccaat |
16842559 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 70; E-Value: 8e-31
Query Start/End: Original strand, 221 - 518
Target Start/End: Original strand, 16837176 - 16837473
Alignment:
| Q |
221 |
aaagttgtggtagcatctccactccttcgacttccaacaccctctctaaatttggtaggtcatgcaaagtcaaatctttcaatgacgtaaaagccttctc |
320 |
Q |
| |
|
||||||||| | ||||||||||||||| ||| ||||||||||||||||||||| | | | | || | || || || | ||||| ||||||||||| |
|
|
| T |
16837176 |
aaagttgtgacaacatctccactccttcagctttcaacaccctctctaaatttggcaaattacgtaacgacatttcctttagtgacggaaaagccttctt |
16837275 |
T |
|
| Q |
321 |
ggtcgcaggttcatacaagtcatcatcaatgtacattagatctcccattccagatataaaaagagtagttaaacatggtaatttaccaaatgaaggaagc |
420 |
Q |
| |
|
||||||| |||||||| |||||| ||||| ||| ||| ||||| |||||||||| | ||||||| |||||||| ||||||||||||| || |||||| |
|
|
| T |
16837276 |
ggtcgcaccttcatacatgtcatcgtcaatatactttacatctcgtattccagatacataaagagtggttaaacaaggtaatttaccaagtgggggaagc |
16837375 |
T |
|
| Q |
421 |
tgcctgcagtttttacaatcaaagagaataatacgaactagacctttcaaaatagaagtatttttcatccaatgagaaaaatatgttcccccataacc |
518 |
Q |
| |
|
|| ||||||||||| | | |||| |||| | ||||| |||| |||||||||||||||||||||||||| | || || | ||||||||||||| |
|
|
| T |
16837376 |
cgctgacagtttttacagttatagagtataacataaactaacccttccaaaatagaagtatttttcatccaatttggaatatttattcccccataacc |
16837473 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 66; E-Value: 2e-28
Query Start/End: Original strand, 221 - 748
Target Start/End: Complemental strand, 18807884 - 18807348
Alignment:
| Q |
221 |
aaagttgtggtagcatctccactccttcgacttccaacaccctctctaaatttggtaggtcatgcaaagtcaaatctttcaatgacgtaaaagccttctc |
320 |
Q |
| |
|
||||||||||||||||||| || ||||| ||| ||||| ||||||||| ||||||| || ||| ||| |||| |||||||| | ||||||||||| |
|
|
| T |
18807884 |
aaagttgtggtagcatctctacgccttcagctttcaacatcctctctaagtttggtaaaccaagcagagttaaattcttcaatgaaatgaaagccttctc |
18807785 |
T |
|
| Q |
321 |
ggtcgcaggttcatacaagtcatcatcaatgtacattagatctcccattccagatataaaaagagtagttaaacatggtaatttaccaaatgaaggaagc |
420 |
Q |
| |
|
| | || |||||| | |||||||||||||||| ||| ||||| ||||||| ||| | ||||||| |||||||| ||||||||||||| || ||||||| |
|
|
| T |
18807784 |
agatgtagattcatatatgtcatcatcaatgtactttaaatctctcattccaaatacataaagagtggttaaacaaggtaatttaccaagtggaggaagc |
18807685 |
T |
|
| Q |
421 |
tgcctgcagtttttacaatcaaagagaataata-cgaactagacctttcaaaatagaagtatttttcatccaatgagaaaaatatgttcccccataacca |
519 |
Q |
| |
|
|| ||||| ||||| | ||| ||||| ||| | || |||| ||||||||| | |||| |||||||||| | ||||| | ||||| ||||||| |
|
|
| T |
18807684 |
cgctgacagttgttacagttgtagaatgtaatatcgaccaag-ccttccaaaatagatgcatttctcatccaatgtggaaaatgtattcccacataaccc |
18807586 |
T |
|
| Q |
520 |
tccaccccaacatgcttaagtcctgaatgaggctcaagagcttcaagtactcgctcagcatgaacaccactaacttgtgaat---------caccccatg |
610 |
Q |
| |
|
|| | ||||| | ||| || || | ||||||||||| |||||||||||||||||| ||| | | || || |||| |||| |||||||| |
|
|
| T |
18807585 |
tcaatcccaaaacccttgagaccagtgtgaggctcaagggcttcaagtactcgctcaacatcagtatcaataccttgcgaattagcgtgactaccccatg |
18807486 |
T |
|
| Q |
611 |
acaaatataggtgattcaggtctttcttgccaatcaaattagcttttctagcatcctcctcatttgacacattctcaaggcctttgatgtatagcttacc |
710 |
Q |
| |
|
||| || | | ||| | || || || |||||||||||||||| | |||||||| ||| | || ||||||||||||||| |||||| |||||| || |
|
|
| T |
18807485 |
acaggtacaagcaatttaactcctttttaccaatcaaattagcttctttagcatcccattcactagatacattctcaaggcctctgatgtgtagcttgcc |
18807386 |
T |
|
| Q |
711 |
tcctaattgtaagttgtgtagctctgctaaaccaaacc |
748 |
Q |
| |
|
||||| |||||||| |||| ||||||||||||||||| |
|
|
| T |
18807385 |
tcctagttgtaagtcatgtaactctgctaaaccaaacc |
18807348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 62; E-Value: 5e-26
Query Start/End: Original strand, 1320 - 1493
Target Start/End: Complemental strand, 18870680 - 18870507
Alignment:
| Q |
1320 |
tttgacttcttgaaaaaatgacctttgatataattcattccatacctcattaccaacatgctccatctgcaagtttcctctagatgcaacaagtccatta |
1419 |
Q |
| |
|
||||||||||||||||||||| || | ||||||||||||||| || |||| |||||||||||||| || || ||||| | || | | | ||||||| |
|
|
| T |
18870680 |
tttgacttcttgaaaaaatgatctctcatataattcattccacacttcatgaccaacatgctccacctctaaatttccaatggaagagatgaatccatta |
18870581 |
T |
|
| Q |
1420 |
gccatccaaagttgaatgagatcttccttcaccatttcaaaatccttaggaaaaacagcacaaaaagtaaaaca |
1493 |
Q |
| |
|
| || |||||| || || || ||||||||||||||||||||||||||||||||||| ||||||| |||||||| |
|
|
| T |
18870580 |
gtcaaccaaagatggatcagttcttccttcaccatttcaaaatccttaggaaaaacctcacaaaaggtaaaaca |
18870507 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 52; E-Value: 4e-20
Query Start/End: Original strand, 640 - 815
Target Start/End: Original strand, 16842710 - 16842885
Alignment:
| Q |
640 |
ccaatcaaattagcttttctagcatcctcctcatttgacacattctcaaggcctttgatgtatagcttacctcctaattgtaagttgtgtagctctgcta |
739 |
Q |
| |
|
||||| || ||||||| |||||||||| ||||| | |||||| |||||||||||||||| ||| || |||| || || |||||| ||||||||||||| |
|
|
| T |
16842710 |
ccaattaacttagcttctctagcatccctttcattcgtcacattttcaaggcctttgatgtgtagtttgcctcttagttctaagttatgtagctctgcta |
16842809 |
T |
|
| Q |
740 |
aaccaaacccagtttttgaatcaactatgaaattggtcaatgtttggagactagttaactccccaattttaaaagg |
815 |
Q |
| |
|
|||||||||||| | |||| || |||||| || |||||||| ||| ||||||| |||||||||||||||| |
|
|
| T |
16842810 |
aaccaaacccagcctctgaacgtacaatgaaaatgctcaatgttctcagatgagttaaccccccaattttaaaagg |
16842885 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 50; E-Value: 7e-19
Query Start/End: Original strand, 168 - 799
Target Start/End: Complemental strand, 18874934 - 18874294
Alignment:
| Q |
168 |
agatggaatgggtggcaatgtaagtttgggaacattttttatatcaaagtgaaaaagttgtggtagcatctccactccttcgacttccaacaccctctct |
267 |
Q |
| |
|
|||||||| || |||||||| | |||||||||||| | || | ||||| ||||||||||||||||||| || ||||| ||| ||||| ||||||| |
|
|
| T |
18874934 |
agatggaagggatggcaatgccaacttgggaacatttgtaatgttaaagtaggaaagttgtggtagcatctctacgccttcagctttcaacatcctctct |
18874835 |
T |
|
| Q |
268 |
aaatttggtaggtcatgcaaagtcaaatctttcaatgacgtaaaagccttctcggtcgcaggttcatacaagtcatcatcaatgtacattagatctccca |
367 |
Q |
| |
|
|| ||||||| || || ||| |||| |||||||| | |||||| ||| || | || |||||| | |||||||||||||||| ||| ||||| | |
|
|
| T |
18874834 |
aagtttggtaaaccacacagagttaaattcttcaatgaaatgaaagccctcttggatgtagattcatatatgtcatcatcaatgtactttaaatctctga |
18874735 |
T |
|
| Q |
368 |
ttccagatataaaaagagtagttaaacatggtaatttaccaaatgaaggaagctgcctgcagtttttacaatcaaagagaataata-cgaactagacctt |
466 |
Q |
| |
|
||||| ||| | ||||||| |||||||| ||||||||||||| || ||||||| || ||||| ||||| | ||| ||||| ||| | || |||| |
|
|
| T |
18874734 |
ttccacatacataaagagtggttaaacaaggtaatttaccaagtggaggaagccgctgacagttgttacagttgtagaatgtaatatcgaccaag-cctt |
18874636 |
T |
|
| Q |
467 |
tcaaaatagaagtatttttcatccaatgagaaaaatatgttcccccataaccatccaccccaacatgcttaagtcctgaatgaggctcaagagcttcaag |
566 |
Q |
| |
|
||||||||| | |||| |||||||||| | |||| | ||||| ||||||| || | ||||| | ||| || || | ||||||||||| |||||||| |
|
|
| T |
18874635 |
ccaaaatagatgcatttctcatccaatgtggtaaatgtattcccacataaccctcaatcccaaaacccttgagaccagtgtgaggctcaagggcttcaag |
18874536 |
T |
|
| Q |
567 |
tactcgctcagcatgaacaccactaacttgtgaatca---------ccccatgacaaatataggtgattcaggtctttcttgccaatcaaattagctttt |
657 |
Q |
| |
|
|||||||||| ||| | | || || |||| |||| | |||||||||| || | | |||| | || || || |||||||||||||||| | |
|
|
| T |
18874535 |
tactcgctcaacatcagtatcaataccttgcgaattagcgtgactaccccatgacaggtacaagcgatttaactcctttttaccaatcaaattagcttct |
18874436 |
T |
|
| Q |
658 |
ctagcatcctcctcatttgacacattctcaaggcctttgatgtatagcttacctcctaattgtaagttgtgtagctctgctaaaccaaacccagtttttg |
757 |
Q |
| |
|
|||||||| ||| | || ||||||||||||||| |||||| |||||| ||||||| ||||| || |||| || ||||||||||||||| | || | |
|
|
| T |
18874435 |
ttagcatcccattcactagatacattctcaaggcctctgatgtgtagcttgcctcctagttgtaggtcatgtaactgtgctaaaccaaaccccgccttcg |
18874336 |
T |
|
| Q |
758 |
aatcaactatgaaattggtcaatgtttggagactagttaact |
799 |
Q |
| |
|
| || || |||||| || |||| |||| ||||| |||||||| |
|
|
| T |
18874335 |
attccacaatgaaagtgctcaaagttttgagacaagttaact |
18874294 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 45; E-Value: 7e-16
Query Start/End: Original strand, 971 - 1071
Target Start/End: Original strand, 16843041 - 16843141
Alignment:
| Q |
971 |
tatcacttgcgtaaagaaccaagtacctcaaatgtattaaattattcaatgacgagagttgataagaacttgtatataaagctcggagaggagtgcttga |
1070 |
Q |
| |
|
|||||||| | ||||| |||||||||||||||| |||||||| ||||| | ||||||||| ||||||||||| ||| ||||||||||||||| |||| |
|
|
| T |
16843041 |
tatcactttcataaagttccaagtacctcaaatggattaaattcttcaaggctgagagttgagaagaacttgtacgtaatgctcggagaggagtgattga |
16843140 |
T |
|
| Q |
1071 |
t |
1071 |
Q |
| |
|
| |
|
|
| T |
16843141 |
t |
16843141 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 221 - 277
Target Start/End: Complemental strand, 16911760 - 16911704
Alignment:
| Q |
221 |
aaagttgtggtagcatctccactccttcgacttccaacaccctctctaaatttggta |
277 |
Q |
| |
|
||||||||| ||||||||| |||||||||| | |||||||||||||||||| |||| |
|
|
| T |
16911760 |
aaagttgtgatagcatctctactccttcgattctcaacaccctctctaaattaggta |
16911704 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 87
Target Start/End: Original strand, 16785510 - 16785573
Alignment:
| Q |
24 |
ttctaaggcactcagattaccgagttcaacaggtaattccttgagtttggcaaatttggatatg |
87 |
Q |
| |
|
|||||| |||| ||| |||||||||||||||||||||||||||||| ||| || || |||||| |
|
|
| T |
16785510 |
ttctaaagcaccaagagtaccgagttcaacaggtaattccttgagttcggcgaaatttgatatg |
16785573 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0144 (Bit Score: 1186; Significance: 0; HSPs: 3)
Name: scaffold0144
Description:
Target: scaffold0144; HSP #1
Raw Score: 1186; E-Value: 0
Query Start/End: Original strand, 53 - 1610
Target Start/End: Original strand, 35810 - 37367
Alignment:
| Q |
53 |
caggtaattccttgagtttggcaaatttggatatggaaagtgccttaagattattgttgttaacaatggacttcaataactcttcatttcctcctttagc |
152 |
Q |
| |
|
||||||||||| ||||| | | ||||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
35810 |
caggtaattccatgagtctagaaaatttgcgtatggaaagtgacttaagattactgttgttaacaatggacttcaataactcttaatttcctcctttagc |
35909 |
T |
|
| Q |
153 |
agaaagtgatttaacagatggaatgggtggcaatgtaagtttgggaacattttttatatcaaagtgaaaaagttgtggtagcatctccactccttcgact |
252 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||| || | |||||||||||||||||||| | |||||||||| |
|
|
| T |
35910 |
agaaagtgatttaacagatggaaggggtggcaatgtaagtttggggacatttgttatatctaaatttaaaagttgtggtagcatctctattccttcgact |
36009 |
T |
|
| Q |
253 |
tccaacaccctctctaaatttggtaggtcatgcaaagtcaaatctttcaatgacgtaaaagccttctcggtcgcaggttcatacaagtcatcatcaatgt |
352 |
Q |
| |
|
||||||||||||||||||||||||| | | | ||||||||| | |||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
36010 |
tccaacaccctctctaaatttggtaagccttccaaagtcaactttttcaatgacgtaagagccttctcagtcgcaggttcatacaaatcatcatcaatgt |
36109 |
T |
|
| Q |
353 |
acattagatctcccattccagatataaaaagagtagttaaacatggtaatttaccaaatgaaggaagctgcctgcagtttttacaatcaaagagaataat |
452 |
Q |
| |
|
|| ||| ||||| ||||||||||| ||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||| |
|
|
| T |
36110 |
actttatatctctcattccagatacaaaaagaatatctaaacatggtaatttaccaaatggaggaagctgcctgcagtttttacagtcatagagaataat |
36209 |
T |
|
| Q |
453 |
acgaactagacctttcaaaatagaagtatttttcatccaatgagaaaaatatgttcccccataaccatccaccccaacatgcttaagtcctgaatgaggc |
552 |
Q |
| |
|
|| ||||| |||||| | |||| || ||||| |||||||| ||| ||| | ||||||| |||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
36210 |
actaactaaaccttttacaatataaatatttctcatccaacgaggaaattgtgttcccatataaccatccaccccaacatgcttaagtcctgaatggggc |
36309 |
T |
|
| Q |
553 |
tcaagagcttcaagtactcgctcagcatgaacaccactaacttgtgaatcaccccatgacaaatataggtgattcaggtctttcttgccaatcaaattag |
652 |
Q |
| |
|
|||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| | |||| | ||||||||||||||||||||||| |
|
|
| T |
36310 |
tcaagagcatcaaatactcgctcagcatgaacaccactaacttgtgaatcatcccatgacaaatataagcgatttaagtctttcttgccaatcaaattag |
36409 |
T |
|
| Q |
653 |
cttttctagcatcctcctcatttgacacattctcaaggcctttgatgtatagcttacctcctaattgtaagttgtgtagctctgctaaaccaaacccagt |
752 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||| ||| | |
|
|
| T |
36410 |
cttttctagcatcctcctcatttgacacattctcaaggcctttgatgtataacttgcctcctaattgtaagttgtgtagctctgctaaacgaaaaccaat |
36509 |
T |
|
| Q |
753 |
ttttgaatcaactatgaaattggtcaatgtttggagactagttaactccccaattttaaaaggagttgatttcaatgatggacaaccttcaataatgaga |
852 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
36510 |
ttttgaatcaactatgaaattggtcaatgtttggagactagttaactccccaattttaaaaggagttgatttcaatgatggacaatcttcaataatgaga |
36609 |
T |
|
| Q |
853 |
tgtcgaaggtcctgcaattttgtgaattgttttggaaaactagataaaaaataacaactttgaagtttaagtgtttgcaatttttgatgtttacaaaaag |
952 |
Q |
| |
|
||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||| | ||||||||||||||||||||||||| ||||||||| || |
|
|
| T |
36610 |
tgtcgaaggtcctgcaattttgtgaatgttttgggaaaactagataaaaaacaacaacctcgaagtttaagtgtttgcaatttttgtagtttacaaacag |
36709 |
T |
|
| Q |
953 |
acgcaggcaaggttgtgatatcacttgcgtaaagaaccaagtacctcaaatgtattaaattattcaatgacgagagttgataagaacttgtatataaagc |
1052 |
Q |
| |
|
|||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||| |
|
|
| T |
36710 |
acgcaggcaaggttgtgatatcacttctgtaaagttccaagtacctcaaatgtattaaattcttcaatgacgagagttgataagaactggtacgtaaagc |
36809 |
T |
|
| Q |
1053 |
tcggagaggagtgcttgatagcaacgcatctaaattcttgcaaggtcgcgtatactcaaggaaagttcgcaaggaatcaactttttggaagggaatcatg |
1152 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
36810 |
tcggagaggagtgcttgatagcaacgcatctaaattcttgcaaggtcgcgtatactcaaggaaagttcgcaaggaatcaacattttggaagggaatcatg |
36909 |
T |
|
| Q |
1153 |
tagtcatcttttgatttgttatcacacaggctgaaatggtgaactctaattggcaagtttgtcaactttgaaacatcacaagagacacattcttctccca |
1252 |
Q |
| |
|
|||||||||||||||||||||||| |||| |||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36910 |
tagtcatcttttgatttgttatcaaacagcctgatatggtgaactctaattggcaaattagtcaactttgaaacatcacaagagacacattcttctccca |
37009 |
T |
|
| Q |
1253 |
taatagactgagctaaatcatggactaaatcatgcattttgaatataatgttacctgctaaatctgatttgacttcttgaaaaaatgacctttgatataa |
1352 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
37010 |
taatagactgagctaaatcatggactaaatcatgcattttgaatgtaatgttacctgctaaatctgattcgacttcttgaaaaaatgacctttgatataa |
37109 |
T |
|
| Q |
1353 |
ttcattccatacctcattaccaacatgctccatctgcaagtttcctctagatgcaacaagtccattagccatccaaagttgaatgagatcttccttcacc |
1452 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
37110 |
ttcattccatacctcattaccaacatgctccatctgtaagtttcctctagatgcaacaagtccattagccatccaaagttgaatgagattttccttcacc |
37209 |
T |
|
| Q |
1453 |
atttcaaaatccttaggaaaaacagcacaaaaagtaaaacatggcctcaatgacaatttcaagttaaagtagctcagtctcaaagcagacatgacttggt |
1552 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37210 |
attttaaaatccttaggaaaaacagcacaaaaagtaaaacatggcctcaatgacaatttcaagttaaagtagctcagtctcaaagcagacatgacttggt |
37309 |
T |
|
| Q |
1553 |
tatcatcagctaaattccaaaactcactttccaccacagaaatccattgatgtccatc |
1610 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
37310 |
tatcatcagctaaattccaaaactcactttccaccacagaaatccattgatgttcatc |
37367 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0144; HSP #2
Raw Score: 359; E-Value: 0
Query Start/End: Original strand, 570 - 1092
Target Start/End: Original strand, 34901 - 35423
Alignment:
| Q |
570 |
tcgctcagcatgaacaccactaacttgtgaatcaccccatgacaaatataggtgattcaggtctttcttgccaatcaaattagcttttctagcatcctcc |
669 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| | ||||||||||||| | |||| | ||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
34901 |
tcgctcagcatgaactccactaacttgtgaatcatctcatgacaaatataagcgatttaagtctttcttgccaatcaaatttgcttttctagcatcctcc |
35000 |
T |
|
| Q |
670 |
tcatttgacacattctcaaggcctttgatgtatagcttacctcctaattgtaagttgtgtagctctgctaaaccaaacccagtttttgaatcaactatga |
769 |
Q |
| |
|
|||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||| |
|
|
| T |
35001 |
tcatccgacacattctcaaggccattgatgtatagcttgcctcctaattgtaagttgtgtagctctgctaaaccaaactcagtttctgaaccaactatga |
35100 |
T |
|
| Q |
770 |
aattggtcaatgtttggagactagttaactccccaattttaaaaggagttgatttcaatgatggacaaccttcaataatgagatgtcgaaggtcctgcaa |
869 |
Q |
| |
|
||||||||||||||| | || |||||||||||||||| |||||||||||||| |||||| |||||| || ||| | |||||||||||||| |||||| |
|
|
| T |
35101 |
aattggtcaatgttttcaaacaagttaactccccaattctaaaaggagttgatagcaatgacggacaagttttaatcacgagatgtcgaaggttctgcaa |
35200 |
T |
|
| Q |
870 |
ttttgtgaattgttttggaaaactagataaaaaataacaactttgaagtttaagtgtttgcaatttttgatgtttacaaaaagacgcaggcaaggttgtg |
969 |
Q |
| |
|
||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||| ||||||| ||||||||||| |
|
|
| T |
35201 |
tttggtgaattgtttgggaaaactagataaaaaataacaacgttgaagtttaagtgtttgcaatttttgtagttcacaaacagacgcacgcaaggttgtg |
35300 |
T |
|
| Q |
970 |
atatcacttgcgtaaagaaccaagtacctcaaatgtattaaattattcaatgacgagagttgataagaacttgtatataaagctcggagaggagtgcttg |
1069 |
Q |
| |
|
||||||||| |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
35301 |
atatcacttacgtaaagatccaagtacctcaaatgtattaaattcttcaatgacgagagttgataagaacttgtacataaagctcggagaggagtgcttg |
35400 |
T |
|
| Q |
1070 |
atagcaacgcatctaaattcttg |
1092 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
35401 |
atagcaacgcatctaaattcttg |
35423 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0144; HSP #3
Raw Score: 78; E-Value: 1e-35
Query Start/End: Original strand, 221 - 799
Target Start/End: Complemental strand, 3479 - 2892
Alignment:
| Q |
221 |
aaagttgtggtagcatctccactccttcgacttccaacaccctctctaaatttggtaggtcatgcaaagtcaaatctttcaatgacgtaaaagccttctc |
320 |
Q |
| |
|
||||||||||||||||||| || ||||| ||| ||||| ||||||||| ||||||| | ||| |||||||| ||||| || | |||||| ||| |
|
|
| T |
3479 |
aaagttgtggtagcatctctaccccttcagctttcaacatcctctctaagtttggtaaaccccgcagagtcaaatacttcaacgaaatgaaagccctctt |
3380 |
T |
|
| Q |
321 |
ggtcgcaggttcatacaagtcatcatcaatgtacattagatctcccattccagatataaaaagagtagttaaacatggtaatttaccaaatgaaggaagc |
420 |
Q |
| |
|
|| | || |||||| |||||||||||||||||| ||| ||||| ||||||||||| | ||||||| |||||||| ||||||||||||| || |||||| |
|
|
| T |
3379 |
ggaagaagattcatataagtcatcatcaatgtactttaaatctctcattccagatacataaagagtggttaaacaaggtaatttaccaagtggaggaag- |
3281 |
T |
|
| Q |
421 |
tgcctg-cagtttttacaatcaaagagaataatacgaactagacctttcaaa-atagaagtatttttcatccaatgagaaaaatatgttcccccataacc |
518 |
Q |
| |
|
| ||| ||||||||||| | |||| |||| | ||||| |||| || || |||||||||||| |||||||||| | ||||| | ||||| ||||| | |
|
|
| T |
3280 |
tcactgacagtttttacagttgtagagtataacatcaacta-acctctccaagatagaagtatttctcatccaatggggaaaatgtattcccacataatc |
3182 |
T |
|
| Q |
519 |
atccaccccaacatgcttaagtcctgaatgaggctcaagagcttcaagtactcgctcagcatgaacaccactaacttgtgaatca---------ccccat |
609 |
Q |
| |
|
| |||||||| | |||||| |||| |||| ||||| ||||||||||||||||| ||| | | || | ||| |||| | |||||| |
|
|
| T |
3181 |
cttcaccccaaaacccttaagacctgtgggaggttcaaggacttcaagtactcgctcaacattagtatcaatgcctttggaattagcgtcactaccccat |
3082 |
T |
|
| Q |
610 |
gacaaatataggtgattcaggtctttcttgccaatcaaattagcttttctagcatcctcctcatttgacacattctcaaggcctttgatgtatagcttac |
709 |
Q |
| |
|
|| | |||| | |||||| || || || |||||||||||||||| | |||||||| ||| ||||||||||||||||||||||||||| |||||| | |
|
|
| T |
3081 |
gataggtataagcgattcaactcctttttaccaatcaaattagcttctttagcatcccattcacttgacacattctcaaggcctttgatgtgtagcttgc |
2982 |
T |
|
| Q |
710 |
ctcctaattgtaagttgtgtagctctgctaaaccaaacccagtttttgaatcaactatgaaattggtcaatgtttggagactagttaact |
799 |
Q |
| |
|
||||||||||||||| ||| |||||||||||| ||||| | || ||| | || |||||| || ||||||||| |||| |||||||| |
|
|
| T |
2981 |
ctcctaattgtaagtcacgtaactctgctaaaccgaaccccatcttcgaacccacgatgaaagtgctcaatgtttttagacaagttaact |
2892 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0133 (Bit Score: 600; Significance: 0; HSPs: 7)
Name: scaffold0133
Description:
Target: scaffold0133; HSP #1
Raw Score: 600; E-Value: 0
Query Start/End: Original strand, 105 - 1605
Target Start/End: Original strand, 11215 - 12721
Alignment:
| Q |
105 |
attgttgttaacaatggacttcaataactcttcatttcctcctttagcagaaagtgatttaacagatggaatgggtggcaatgtaagtttgggaacattt |
204 |
Q |
| |
|
|||||||| || ||||||||||||||| ||||||||||||| ||||| ||||||| | | |||||||| || |||||| |||||| || |||| | |
|
|
| T |
11215 |
attgttgtaaaaaatggacttcaataattcttcatttcctcgactagcataaagtgactccatagatggaagggactgcaatgcaagtttagggacatct |
11314 |
T |
|
| Q |
205 |
tttatatcaaagtgaaaaagttgtggtagcatctccactccttcgacttccaacaccctctctaaatttggtaggtcatgcaaagtcaaatctttcaatg |
304 |
Q |
| |
|
||||| | || | ||||| ||| |||||||||| ||||||||||||| ||||||||||||||||||||||| |||| |||||| || | ||||| || |
|
|
| T |
11315 |
gttatagctaacttcaaaagctgttgtagcatctctactccttcgactttcaacaccctctctaaatttggtaagtcagccaaagtaaattttttcagtg |
11414 |
T |
|
| Q |
305 |
acgtaaaagccttctcggtcgcaggttcatacaagtcatcatcaatgtacattagatctcccattccagatataaaaagagtagttaaacatggtaattt |
404 |
Q |
| |
|
|||||||||||||||| |||| |||||||||||| ||||||||||||| ||| ||||| ||||| ||||| | |||| |||||| ||||||||||| |
|
|
| T |
11415 |
acgtaaaagccttctcagtcgtaggttcatacaaactatcatcaatgtactttaaatctctcattctagatacagaaaggaaagttaagcatggtaattt |
11514 |
T |
|
| Q |
405 |
accaaatgaaggaagctgcctgcagtttttacaatcaaagagaataatacgaactagacctttcaaaatagaagtatttttcatccaatgagaaaaatat |
504 |
Q |
| |
|
|||||||| ||||| |||||||||||||||||| ||| |||||||||||| |||||||||||| | ||||||||||||| |||||||||||| ||||| | |
|
|
| T |
11515 |
accaaatggaggaatctgcctgcagtttttacagtcatagagaataatactaactagaccttttagaatagaagtatttctcatccaatgaggaaaatgt |
11614 |
T |
|
| Q |
505 |
gttcccccataaccatccaccccaacatgcttaagtcctgaatgaggctcaagagcttcaagtactcgctcagcatgaacaccactaacttgtgaat--- |
601 |
Q |
| |
|
| |||| |||||| | || ||||| | ||| || ||||||||||||||||||| ||| | |||| |||||||||||| || |||||||||||||| |
|
|
| T |
11615 |
gctcccatataaccctgcaacccaaaactctttagacctgaatgaggctcaagagtttctattacttgctcagcatgaatactactaacttgtgaattag |
11714 |
T |
|
| Q |
602 |
------caccccatgacaaatataggtgattcaggtctttcttgccaatcaaattagcttttctagcatcctcctcatttgacacattctcaaggccttt |
695 |
Q |
| |
|
|||||||||||||||||| | |||| | ||| |||||||||||||||||||||||||| |||||||| ||| | ||||| |||| ||||||||| |
|
|
| T |
11715 |
tataatcaccccatgacaaatataagcgatttaagtccttcttgccaatcaaattagcttttcttgcatcctcttcaatcgacactttctgaaggccttt |
11814 |
T |
|
| Q |
696 |
gatgtatagcttacctcctaattgtaagttgtgtagctctgctaaaccaaacccagtttttgaatcaactatgaaattggtcaatgtttggagactagtt |
795 |
Q |
| |
|
|||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||| |||| |||| |
|
|
| T |
11815 |
aatgtgtagctttcctcctaattgtaagttgtgtagctctgctaaaccaaacccagtttttgaaccaacaatgaaaatggtcaatgttttcagacaagtt |
11914 |
T |
|
| Q |
796 |
aactccccaattttaaaaggagttgatttcaatgatggacaaccttcaataatgagatgtcgaaggtcctgcaattttgtgaattgttttggaaaactag |
895 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||| || ||| ||||||||||||||||||| ||||||||| |||||||| |||||| || |
|
|
| T |
11915 |
aactccccaattttaaaaggagttgatttcaatgaactgcaatttttaatcatgagatgtcgaaggtccttcaattttgtaaattgtttgggaaaatcag |
12014 |
T |
|
| Q |
896 |
ataaaaaataacaactttgaagtttaagtgtttgcaatttttgatgtttacaaaaagacgcaggcaaggttgtgatatcacttgcgtaaagaaccaagta |
995 |
Q |
| |
|
||| | || ||| ||| |||||| |||||||||||||| || || | |||| ||| |||||||||| ||| |||| | |||| ||||||| |
|
|
| T |
12015 |
atagatgatgacatttttcaagttttagtgtttgcaatttctgtagtctgcaaacagaaccaggcaaggtaatgaagtcacaagatgaaagttccaagta |
12114 |
T |
|
| Q |
996 |
cctcaaatgtattaaattattcaatgacgagagttgataagaacttgtatataaagctcggagaggagtgcttgatagcaacgcatctaaattcttgcaa |
1095 |
Q |
| |
|
||||||||| |||||||| |||| |||||| ||| ||| |||||| ||||||||| || | |||| ||||||| ||| |||||| |||||| | |
|
|
| T |
12115 |
cctcaaatgcattaaatttg---atgatgagagtcgatgagactttgtatgtaaagctcgaagcgaagtggttgatagaaacacatctagattctttgag |
12211 |
T |
|
| Q |
1096 |
ggtcgcgtatactcaaggaaagttcgcaaggaatcaactttttggaagggaatcatgtagtcatcttttgatttgttatcacacaggctgaaatggtgaa |
1195 |
Q |
| |
|
||| | |||||||||| || |||||||||||||||| |||||||||||||||||||||||||| | | |||| |||||| | || || | |||||||| |
|
|
| T |
12212 |
ggtggtttatactcaagaaaggttcgcaaggaatcaaatttttggaagggaatcatgtagtcatatctgaattttttatcaaagagacttatatggtgaa |
12311 |
T |
|
| Q |
1196 |
ctctaattggcaagtttgtcaactttgaaacatcacaagagacacattcttctcccataatagactgagctaaatcatggactaaatcatgcattttgaa |
1295 |
Q |
| |
|
||||||||| ||| ||||| || |||||| |||| |||| | |||||| ||||||||||||||| |||||||||||||| ||||||||||||||||| |
|
|
| T |
12312 |
ctctaattgacaaatttgttaaatttgaagcatctgaagaaatacattcatctcccataatagacactgctaaatcatggacaaaatcatgcattttgaa |
12411 |
T |
|
| Q |
1296 |
tataatgttacctgctaaatctgatttgacttcttgaaaaaatgacctttgatataattcattccatacctcattaccaacatgctccatctgcaagttt |
1395 |
Q |
| |
|
||||||||||| | ||||||||||| ||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
12412 |
agtaatgttacctacaaaatctgatttaacttcttcaaataatgacctttggtataattcattccatacctcattaccaacatgctccatctgtaagttt |
12511 |
T |
|
| Q |
1396 |
cctctagatgcaacaagtccattagccatccaaagttgaatgagatcttccttcaccatttcaaaatccttaggaaaaacagcacaaaaagtaaaacatg |
1495 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| || |||||||||||||| ||||||||||||| |
|
|
| T |
12512 |
cctctagatgtaacaagtccattagccatccaaagttgaatgagattttccttcaccatttcataatctttgggaaaaacagcacagaaagtaaaacatg |
12611 |
T |
|
| Q |
1496 |
gcctcaatgacaatttcaagttaaagtagctcagtctcaaagcagacatgacttggttatcatcagctaaattccaaaactcactttccaccacagaaat |
1595 |
Q |
| |
|
||||||||||||||||||||||||| ||||| ||||||||||||||||||| | | | | |||| |||| |||||||||||||||| | |||||||| |
|
|
| T |
12612 |
gcctcaatgacaatttcaagttaaaatagcttagtctcaaagcagacatgataggatcaacctcaggtaaactccaaaactcactttctagtacagaaat |
12711 |
T |
|
| Q |
1596 |
ccattgatgt |
1605 |
Q |
| |
|
|||||||||| |
|
|
| T |
12712 |
ccattgatgt |
12721 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0133; HSP #2
Raw Score: 511; E-Value: 0
Query Start/End: Original strand, 242 - 1605
Target Start/End: Original strand, 16552 - 17927
Alignment:
| Q |
242 |
ctccttcgacttccaacaccctctctaaatttggtaggtcatgcaaagtcaaatctttcaatgacgtaaaagccttctcggtcgcaggttcatacaagtc |
341 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||| ||| |||| ||| | ||| |||||||||||||||||||| |||||||||||||| ||||| |
|
|
| T |
16552 |
ctccttcgacttccaacaccttctctaaatttggtaagtcccacaaaaccaacttttttaatgacgtaaaagccttctcagtcgcaggttcatagaagtc |
16651 |
T |
|
| Q |
342 |
atcatcaatgtacattagatctcccattccagatataaaaagagtagttaaacatggtaatttaccaaatgaaggaagctgcctgcagtttttacaatca |
441 |
Q |
| |
|
||||||||||||| ||| ||||| ||||||||||| | ||||| |||||||| |||||||||||||||||| |||||| ||||||||||||||||| ||| |
|
|
| T |
16652 |
atcatcaatgtactttatatctctcattccagatacataaagattagttaaatatggtaatttaccaaatggaggaagttgcctgcagtttttacagtca |
16751 |
T |
|
| Q |
442 |
aagagaataatacgaactagacctttcaaaatagaagtatttttcatccaatgagaaaaatatgttcccccataaccatccaccccaacatgcttaagtc |
541 |
Q |
| |
|
||||||||||| |||||| ||| || | ||||||||||||| |||||||| ||| ||| | ||||||| ||||| | |||||||| | |||||| | |
|
|
| T |
16752 |
tagagaataatatgaactaaaccatttagaatagaagtatttctcatccaaggaggaaattgtgttcccatataacactgcaccccaaaactcttaagac |
16851 |
T |
|
| Q |
542 |
ctgaatgaggctcaagagcttcaagtactcgctcagcatgaacaccactaacttgtgaat---------caccccatgacaaatataggtgattcaggtc |
632 |
Q |
| |
|
|||||||||| ||||||||||| |||||||||||||||| || ||||| ||||||||||| ||||||| |||||||||| | |||| | ||| |
|
|
| T |
16852 |
ctgaatgaggttcaagagcttctagtactcgctcagcatcaagaccaccaacttgtgaattaggataatcaccccaagacaaatataagcgatttaagtc |
16951 |
T |
|
| Q |
633 |
tttcttgccaatcaaattagcttttctagcatcctcctcatttgacacattctcaaggcctttgatgtatagcttacctcctaattgtaagttgtgtagc |
732 |
Q |
| |
|
|||||||||||||||||||||| | | |||||||| ||||| ||||| |||| |||||||||||||| |||||| |||||||||||||||||||||||| |
|
|
| T |
16952 |
cttcttgccaatcaaattagcttgttttgcatcctcttcattcgacactttctgaaggcctttgatgtgtagcttgcctcctaattgtaagttgtgtagc |
17051 |
T |
|
| Q |
733 |
tctgctaaaccaaacccagtttttgaatcaactatgaaattggtcaatgtttggagactagttaactccccaattttaaaaggagttgatttcaatgatg |
832 |
Q |
| |
|
||| ||||||||||||||||||||||| |||| |||||| |||||||||||| |||| |||||||||||||||| | |||||||| ||| ||||| |
|
|
| T |
17052 |
tctactaaaccaaacccagtttttgaaccaacaatgaaagtggtcaatgttttcagacaagttaactccccaattctgaaaggagtagatgtcaatctcc |
17151 |
T |
|
| Q |
833 |
gacaaccttcaataatgagatgtcgaaggtcctgcaattttgtgaattgttttggaaaactagataaaaaataacaactttgaagtttaagtgtttgcaa |
932 |
Q |
| |
|
| ||| | ||||| ||||||| |||||| ||||||| ||| |||||||| ||||||||||| | || || ||||| || |||||||||||||||||| |
|
|
| T |
17152 |
ggcaagcaataataacaagatgtctaaggtcatgcaattgtgtcaattgtttcggaaaactagaaagaatatcacaaccttcaagtttaagtgtttgcaa |
17251 |
T |
|
| Q |
933 |
tttttgatgtttacaaaaagacgcaggcaaggttgtgatatcacttgcgtaaagaaccaagtacctcaaatgtattaaattattcaatgacgagagttga |
1032 |
Q |
| |
|
||| || || |||||| |||||| ||||||||| | |||||||| |||||| ||||||||| |||||| |||||||| || |||| ||||| ||| |
|
|
| T |
17252 |
tttctgcagtctacaaacagacgcgggcaaggttcttatatcactcatgtaaagttccaagtaccgcaaatgcattaaattctttaatgcagagagatga |
17351 |
T |
|
| Q |
1033 |
taagaacttgtatataaagctcggagaggagtgcttgatagcaacgcatctaaattcttgcaaggtcgcgtatactcaaggaaagttcgcaaggaatcaa |
1132 |
Q |
| |
|
|| ||||| || |||||||||||| |||||| ||| ||||| ||| |||| ||| | ||| || ||||||| || |||||||| || |||| |
|
|
| T |
17352 |
caaaaacttatacgtaaagctcggagtggagtgacagatggcaacacataggaatttttgaagggttcattaaactcaagaaaggttcgcaacgattcaa |
17451 |
T |
|
| Q |
1133 |
ctttttggaagggaatcatgt---agtc-atcttttgatttgttatcacacaggctgaaatggtgaactctaattggcaagtttgtcaactttgaaacat |
1228 |
Q |
| |
|
||||| ||||||||||||| |||| | ||||| ||| |||| | || | ||||||||||||||||| ||| | | ||| ||||||| | |
|
|
| T |
17452 |
tttttttaaagggaatcatgttgcagtcgaacttttc-tttactatctaagcaacttatatggtgaactctaattgacaaatcagccaagcttgaaacct |
17550 |
T |
|
| Q |
1229 |
cacaagagacacattcttctcccataatagactgagctaaatcatggactaaatcatgcattttgaatataatgttacctgctaaatctgatttgacttc |
1328 |
Q |
| |
|
| ||| |||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||| |
|
|
| T |
17551 |
tagaagccacacattcttctccaataatggaatgagctaaatcatggactaaatcatgcattttgaatgtaatgttacctacaaaatctgatttgacttc |
17650 |
T |
|
| Q |
1329 |
ttgaaaaaatgacctttgatataattcattccatacctcattaccaacatgctccatctgcaagtttcctctagatgcaacaagtccattagccatccaa |
1428 |
Q |
| |
|
|||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||| |
|
|
| T |
17651 |
ttgaaagaatgacctttggtttaattcattccatacctcattaccaacatgctccatctgtaagtttcctcttgatgtaacaagtccattagccatccaa |
17750 |
T |
|
| Q |
1429 |
agttgaatgagatcttccttcaccatttcaaaatccttaggaaaaacagcacaaaaagtaaaacatggcctcaatgacaatttcaagttaaagtagctca |
1528 |
Q |
| |
|
| | |||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| ||| ||||||| ||||||||||| | |
|
|
| T |
17751 |
aatggaatgatattttccttcaccatttcaaaatccttaggaaaaacagtacaaaaagtaaaacagggcctcaaggacgatttcaaattaaagtagctta |
17850 |
T |
|
| Q |
1529 |
gtctcaaagcagacatgacttggttatcatcagctaaattccaaaactcactttccaccacagaaatccattgatgt |
1605 |
Q |
| |
|
|||||||||||||||| | ||||||| |||| ||||||||||| |||||||||| ||||||| |||||||||| |
|
|
| T |
17851 |
gtctcaaagcagacattatagggttatcctcagataaattccaaacctcactttcctttacagaaagccattgatgt |
17927 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0133; HSP #3
Raw Score: 391; E-Value: 0
Query Start/End: Original strand, 121 - 1169
Target Start/End: Original strand, 6856 - 7916
Alignment:
| Q |
121 |
gacttcaataactcttcatttcctcctttagcagaaagtgatttaacagatggaatgggtggcaatgtaagtttgggaacattttttatatcaaagtgaa |
220 |
Q |
| |
|
||||||||||| |||||||||||||| ||||||||||||| | ||||||| ||| || || ||||||||||||||| |||||| ||||||| || | | |
|
|
| T |
6856 |
gacttcaataattcttcatttcctccactagcagaaagtgactcaacagatagaagggatgtcaatgtaagtttggggacatttgttatatctaaattta |
6955 |
T |
|
| Q |
221 |
aaagttgtggtagcatctccactccttcgacttccaacaccctctctaaatttggtaggtcatgcaaagtcaaatctttcaatgacgtaaaagccttctc |
320 |
Q |
| |
|
||||||||||||||||||| ||||| || |||||||||||||||||||||||||||| |||||||||| |||| | ||||| |||||||||||| ||||| |
|
|
| T |
6956 |
aaagttgtggtagcatctctactccatcaacttccaacaccctctctaaatttggtaagtcatgcaaactcaattttttcagtgacgtaaaagctttctc |
7055 |
T |
|
| Q |
321 |
ggtcgcaggttcatacaagtcatcatcaatgtacattagatctcccattccagatataaaaagagtagttaaacatggtaatttaccaaatgaaggaagc |
420 |
Q |
| |
|
||| ||||||||||||||||||||||||||||| ||| || || ||||||||||| | | ||| ||||||||||||||||||||||||| | |||||| |
|
|
| T |
7056 |
agtctcaggttcatacaagtcatcatcaatgtactttatatatctcattccagataaatagagaatagttaaacatggtaatttaccaaacggaggaaga |
7155 |
T |
|
| Q |
421 |
tgcctgcagtttttacaatcaaagagaataatacgaactagacctttcaaaatagaagtatttttcatccaatgagaaaaatatgttcccccataaccat |
520 |
Q |
| |
|
||||| || |||||||| | | |||||||||||| ||||| |||||| | |||||||||||||||||||||| || |||| |||||| |||||||||| |
|
|
| T |
7156 |
tgcctacaatttttacagttatagagaataatactaactaaaccttttagaatagaagtatttttcatccaagaaggaaaaattgttccaccataaccat |
7255 |
T |
|
| Q |
521 |
ccaccccaacatgcttaagtcc---tgaatgaggctcaagagcttcaagtactcgctcagcatgaacaccactaacttgtga---------atcacccca |
608 |
Q |
| |
|
|||||||| |||||| ||||| ||||| |||||||||||||| ||||||||||| |||| ||||| | ||||||||| || |||||| |
|
|
| T |
7256 |
tcaccccaaaatgcttcagtccggaggaatggggctcaagagcttccagtactcgctcggcatcaacactgccaacttgtgaattagtatcattacccca |
7355 |
T |
|
| Q |
609 |
tgacaaatataggtgattcaggtctttcttgccaatcaaattagcttttctagcatcctcctcatttgacacattctcaaggcctttgatgtatagctta |
708 |
Q |
| |
|
|||||||||| ||| || ||| ||||||| ||||||||||| || |||||||||||| || || |||||||||||||| | |||||||| |||||| |
|
|
| T |
7356 |
agacaaatataaacgatccaagtccttcttgctaatcaaattagtttctctagcatcctcttcgttcgacacattctcaagacatttgatgtgtagcttg |
7455 |
T |
|
| Q |
709 |
cctcctaattgtaagttgtgtagctctgctaaaccaaacccagtttttgaatcaactatgaaattggtcaatgtttggagactagttaactccccaattt |
808 |
Q |
| |
|
|||||||| |||||||||||||||| |||||||||| |||||||||||||| |||| |||||| | |||||||||| || |||||||||| ||||||| |
|
|
| T |
7456 |
cctcctaactgtaagttgtgtagctgtgctaaaccatacccagtttttgaaccaacaatgaaaatcgtcaatgttttcaggctagttaactgcccaattc |
7555 |
T |
|
| Q |
809 |
taaaaggagttgatttcaatgatggacaaccttcaataatgagatgtcgaaggtcctgcaattttgtgaattgttttggaaaactagataaaaaataaca |
908 |
Q |
| |
|
||||||||| |||| ||||||| | ||| || ||| ||||||||||||||||||| ||||||||| |||||||| ||||||||||||| |||| || |
|
|
| T |
7556 |
taaaaggagctgatatcaatgaatggcaatttttaatcatgagatgtcgaaggtccttcaattttgtaaattgtttgggaaaactagatagcaaatggca |
7655 |
T |
|
| Q |
909 |
actttgaagtttaagtgtttgcaatttttgatgtttacaaaaagacgcaggcaaggttgtgatatcacttgcgtaaagaaccaagtacctcaaatgtatt |
1008 |
Q |
| |
|
|| || |||||| |||||||||||||| || || |||||| |||| |||||||||||||||| | ||| | |||| |||||||||||||||| | | |
|
|
| T |
7656 |
acgttcaagttttagtgtttgcaatttctgcagtctacaaacagacccaggcaaggttgtgatgttactatcataaatttccaagtacctcaaatgcact |
7755 |
T |
|
| Q |
1009 |
aaattattcaatgacgagagttgataagaacttgtatataaagctcggagaggagtgcttgatagcaacgcatctaaattcttgcaaggtcgcgtatact |
1108 |
Q |
| |
|
||| | |||||| | ||||||| || |||| |||| ||| |||| |||| |||||||| || ||| |||||||||||||| | ||| | |||||| |
|
|
| T |
7756 |
aaactcttcaataatgagagttcatttgaacgtgtaagcaaaactcgaagagaggtgcttgacagaaacacatctaaattcttggagggtggtttatact |
7855 |
T |
|
| Q |
1109 |
caaggaaagttcgcaaggaatcaactttttggaagggaatcatgtagtcatcttttgattt |
1169 |
Q |
| |
|
|||| || |||||||||||||||||||||||||||||||| |||| ||||| ||||||||| |
|
|
| T |
7856 |
caagaaaggttcgcaaggaatcaactttttggaagggaattatgtggtcatattttgattt |
7916 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0133; HSP #4
Raw Score: 205; E-Value: 1e-111
Query Start/End: Original strand, 1221 - 1605
Target Start/End: Original strand, 7995 - 8379
Alignment:
| Q |
1221 |
tgaaacatcacaagagacacattcttctcccataatagactgagctaaatcatggactaaatcatgcattttgaatataatgttacctgctaaatctgat |
1320 |
Q |
| |
|
|||||||||| |||| | |||||||| | ||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||||| ||| |
|
|
| T |
7995 |
tgaaacatcataagaaatacattctttttccataatagactgagctaaatcatggataaaatcatgcattcggaatgtaatgttacctgctaaatcagat |
8094 |
T |
|
| Q |
1321 |
ttgacttcttgaaaaaatgacctttgatataattcattccatacctcattaccaacatgctccatctgcaagtttcctctagatgcaacaagtccattag |
1420 |
Q |
| |
|
|| ||||||||||||||||| ||||| | |||| |||||||||||||| |||||| ||||||||||| || ||||||||||||| |||||| ||||||| |
|
|
| T |
8095 |
ttaacttcttgaaaaaatgatctttgccacaattgattccatacctcatcaccaacgtgctccatctgtaaatttcctctagatgtaacaagaccattag |
8194 |
T |
|
| Q |
1421 |
ccatccaaagttgaatgagatcttccttcaccatttcaaaatccttaggaaaaacagcacaaaaagtaaaacatggcctcaatgacaatttcaagttaaa |
1520 |
Q |
| |
|
|||||||||| |||||||||| |||||| |||||||||||| ||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||| |
|
|
| T |
8195 |
ccatccaaagatgaatgagattttccttaaccatttcaaaacccttaggaaaaacagcacagaaagcaaaacatggtctcaatgacaatttcaagttaaa |
8294 |
T |
|
| Q |
1521 |
gtagctcagtctcaaagcagacatgacttggttatcatcagctaaattccaaaactcactttccaccacagaaatccattgatgt |
1605 |
Q |
| |
|
|||||| | ||||||||||||||||| | | | |||| ||||||||||| |||||||||| |||||||||||||||||| |
|
|
| T |
8295 |
gtagcttattctcaaagcagacatgatagaatcaacctcaggcaaattccaaaattcactttccagtacagaaatccattgatgt |
8379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0133; HSP #5
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 16327 - 16386
Alignment:
| Q |
45 |
gagttcaacaggtaattccttgagtttggcaaatttggatatggaaagtgccttaagatt |
104 |
Q |
| |
|
|||||||||||||||||| |||||||||||| |||| ||||| ||||||| ||||||||| |
|
|
| T |
16327 |
gagttcaacaggtaattctttgagtttggcacattttgatatagaaagtgacttaagatt |
16386 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0133; HSP #6
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 104
Target Start/End: Original strand, 6753 - 6815
Alignment:
| Q |
42 |
accgagttcaacaggtaattccttgagtttggcaaatttggatatggaaagtgccttaagatt |
104 |
Q |
| |
|
||||||||||||||||||||||||||| ||||| ||||| ||||| ||||||| ||| ||||| |
|
|
| T |
6753 |
accgagttcaacaggtaattccttgagattggcgaattttgatatagaaagtgacttgagatt |
6815 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0133; HSP #7
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 11095 - 11141
Alignment:
| Q |
24 |
ttctaaggcactcagattaccgagttcaacaggtaattccttgagtt |
70 |
Q |
| |
|
|||||| ||||| ||| ||| |||||||||||||||||||||||||| |
|
|
| T |
11095 |
ttctaatgcactaagagtactgagttcaacaggtaattccttgagtt |
11141 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 486; Significance: 0; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 486; E-Value: 0
Query Start/End: Original strand, 106 - 1605
Target Start/End: Original strand, 13376453 - 13377963
Alignment:
| Q |
106 |
ttgttgttaacaatggacttcaataactcttcatttcctcctttagcagaaagtgatttaacagatggaatgggtggcaatgtaagtttgggaacatttt |
205 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||| || || |||| | | ||||||||||| || | ||||| |||||| || ||| || |
|
|
| T |
13376453 |
ttgttgttaaaaatggacttcaataactcttcatttcctccggtaacaaaaaggaactcaacagatggaagggacgacaatgcaagttttgggacacatt |
13376552 |
T |
|
| Q |
206 |
ttatatcaaagtgaaaaagttgtggtagcatctccactccttcgacttccaacaccctctctaaatttggtaggtcatgcaaagtcaaatctttcaatga |
305 |
Q |
| |
|
|||| ||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| || | | || ||||| | ||||||||| |
|
|
| T |
13376553 |
ctatacttaagaatgaaagttggggtagcatctccactccttcaacttccaacaccctctctaaatttggtaagttacgtaacgtcaattttttcaatga |
13376652 |
T |
|
| Q |
306 |
cgtaaaagccttctcggtcgcaggttcatacaagtcatcatcaatgtacattagatctcccattccagatataaaaagagtagttaaacatggtaattta |
405 |
Q |
| |
|
|| |||||||||||||| ||||||||||| |||||||| ||||||||| ||| || | ||||||||||| ||| |||||||||||||| ||||||||| |
|
|
| T |
13376653 |
cgcaaaagccttctcggatgcaggttcatataagtcatcttcaatgtactttaaattcctcattccagataaaaagagagtagttaaacacggtaattta |
13376752 |
T |
|
| Q |
406 |
ccaaatgaaggaagctgcctgcagtttttacaatcaaagagaataatacgaactagacctttcaaaatagaagtatttttcatccaatgagaaaaatatg |
505 |
Q |
| |
|
|||| || | ||| ||| ||||||||||||||||| |||||||||||| ||||| | ||| | || ||||||||| |||||||| ||| ||||| | |
|
|
| T |
13376753 |
ccaagtggggaaagttgcttgcagtttttacaatcatagagaataatacaaactaagctttttagaaaagaagtattcctcatccaaggaggaaaatgta |
13376852 |
T |
|
| Q |
506 |
ttcccccataaccatccaccccaacatgcttaagtcctgaatgaggctcaagagcttcaagtactcgctcagcatgaacaccactaacttgtgaa----- |
600 |
Q |
| |
|
||||||| ||| | | || ||||| |||||| |||||||| ||||||||||| || || ||||||||||||| ||||| ||||||||||| |
|
|
| T |
13376853 |
ttcccccgtaatccttcatcccaaatctcttaagacctgaatggggctcaagagcctccagcactcgctcagcatcaacacttgtaacttgtgaactagg |
13376952 |
T |
|
| Q |
601 |
----tcaccccatgacaaatataggtgattcaggtctttcttgccaatcaaattagcttttctagcatcctcctcatttgacacattctcaaggcctttg |
696 |
Q |
| |
|
||||||||||||||||||| |||||| | ||||||||| |||||||||||||||| | |||||||| | || ||||||||||||| ||||||| || |
|
|
| T |
13376953 |
ataatcaccccatgacaaatataagtgatttaagtctttctttccaatcaaattagcttctttagcatccccttcgtttgacacattctgaaggcctctg |
13377052 |
T |
|
| Q |
697 |
atgtatagcttacctcctaattgtaagttgtgtagctctgctaaaccaaacccagtttttgaatcaactatgaaattggtcaatgtttggagactagtta |
796 |
Q |
| |
|
|||| ||| || ||||||||||||||||| || ||||| ||||||||||||||| ||| || |||| |||||| |||||||||||| |||| ||||| |
|
|
| T |
13377053 |
atgtgtagttttcctcctaattgtaagttttgcagctcagctaaaccaaacccaatttccgagccaacaatgaaaatggtcaatgttttcagacaagtta |
13377152 |
T |
|
| Q |
797 |
actccccaattttaaaaggagttgatttcaatgatggacaaccttcaataatgagatgtcgaaggtcctgcaattttgtgaattgttttggaaaactaga |
896 |
Q |
| |
|
|||||| ||| |||| ||| ||||| |||||| | ||| ||| |||||| ||||||| |||||| | ||||| ||| |||| ||||||||||||||| |
|
|
| T |
13377153 |
actccctgattctaaatggacttgataccaatgactggcaatctttaataataagatgtctaaggtcttccaattgtgtaaatttttttggaaaactaga |
13377252 |
T |
|
| Q |
897 |
taaaaaataacaactttgaagtttaagtgtttgcaatttttgatgtttacaaaaagacgcaggcaaggttgtgatatcacttgcgtaaagaaccaagtac |
996 |
Q |
| |
|
| | ||| ||||| || |||||| | ||||||||||| || | | |||| |||| |||||||||||||||| | |||| | ||||| |||||||| |
|
|
| T |
13377253 |
aagagaatcacaacgttcaagttttaaggtttgcaatttctgcagcctgcaaacagactcaggcaaggttgtgatcttactttcataaagttccaagtac |
13377352 |
T |
|
| Q |
997 |
ctcaaatgtattaaattattcaatgacgagagttgataagaacttgtatataaagctcggagaggagtgcttgatagcaacgcatctaaattcttgcaag |
1096 |
Q |
| |
|
|||| ||| |||| ||| |||||| ||||||||| ||||||||||| ||||||||||||||||||| ||||| | ||| ||||||| | ||||| | |
|
|
| T |
13377353 |
ctcagatgaattatattcttcaatcctgagagttgaaaagaacttgtacgtaaagctcggagaggagtgattgatggaaacaaatctaaaattttgcagg |
13377452 |
T |
|
| Q |
1097 |
gtcgcgtatactcaaggaaagttcgcaaggaatcaactttttggaagggaatcatgt---agtcatcttttgatttgttatcacacaggctgaaatggtg |
1193 |
Q |
| |
|
|| | | ||||||| || ||||||||||| |||||||||| ||||| |||||| ||||| |||| ||| ||||| | || | |||||| |
|
|
| T |
13377453 |
gtggtttgaactcaagaaaggttcgcaaggattcaactttttcgaaggacgtcatgttgtagtcaaattttcctttagtatcaaagcaacttatatggtg |
13377552 |
T |
|
| Q |
1194 |
aactctaattggcaagtttgtcaactttgaaacatcacaagagacacattcttctcccataatagactgagctaaatcatggactaaatcatgcattttg |
1293 |
Q |
| |
|
| |||||||| ||||| ||||| || |||| ||| ||| ||||||||||||||||| || || ||||||||||||||||||||||||||||||||| |
|
|
| T |
13377553 |
agttctaattgacaagtcagtcaagcttaaaacctcagaagccacacattcttctcccattatggattgagctaaatcatggactaaatcatgcattttg |
13377652 |
T |
|
| Q |
1294 |
aatataatgttacctgctaaatctgatttgacttcttgaaaaaatgacctttgatataattcattccatacctcattaccaacatgctccatctgcaagt |
1393 |
Q |
| |
|
||| | ||||||||| | | ||||||||| ||||||||||||||||| ||||| |||| |||| ||||||||||||||||||||||||| | || |||| |
|
|
| T |
13377653 |
aatgttatgttacctaccacatctgatttaacttcttgaaaaaatgatctttggcataactcatcccatacctcattaccaacatgctccgt-tgtaagt |
13377751 |
T |
|
| Q |
1394 |
ttcctctagatgcaacaagtccattagccatccaaagttgaatgagatcttccttcaccatttcaaaatccttaggaaaaacagcacaaaaagtaaaaca |
1493 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13377752 |
ttcctctagatgtaacaagtccattagccatccaaagtagaatgagattttccttcaccatttcaaaatccttaggaaaaacagcacaaaaagtaaaaca |
13377851 |
T |
|
| Q |
1494 |
tggcctcaatgacaatttcaagttaaagtagctcagtctcaaagcagacatgacttggttatcatcagctaaattccaaaactcactttccaccacagaa |
1593 |
Q |
| |
|
||||||||| ||||||||||| ||||||||||| ||||||||||||||||||| ||||||| |||| ||||||||||| || ||||||| |||||| |
|
|
| T |
13377852 |
tggcctcaaggacaatttcaaattaaagtagcttagtctcaaagcagacatgatagggttatcctcagataaattccaaagcttactttcctttacagaa |
13377951 |
T |
|
| Q |
1594 |
atccattgatgt |
1605 |
Q |
| |
|
| |||||||||| |
|
|
| T |
13377952 |
agccattgatgt |
13377963 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 106
Target Start/End: Original strand, 13376317 - 13376399
Alignment:
| Q |
24 |
ttctaaggcactcagattaccgagttcaacaggtaattccttgagtttggcaaatttggatatggaaagtgccttaagattat |
106 |
Q |
| |
|
|||||||| ||| ||| | ||||||||| ||||||||||||||||||||||||| | |||||| ||||| ||||||||||| |
|
|
| T |
13376317 |
ttctaaggtacttagagtgccgagttcatcaggtaattccttgagtttggcaaagtctgatatgtaaagtaacttaagattat |
13376399 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 430; Significance: 0; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 430; E-Value: 0
Query Start/End: Original strand, 121 - 1065
Target Start/End: Complemental strand, 38941138 - 38940185
Alignment:
| Q |
121 |
gacttcaataactcttcatttcctcctttagcagaaagtgatttaacagatggaatgggtggcaatgtaagtttgggaacattttttatatcaaagtgaa |
220 |
Q |
| |
|
||||||||||| |||||||||||||| ||||| ||| || | ||||||||||| || |||||| ||||||||| |||||| ||||||| || | | |
|
|
| T |
38941138 |
gacttcaataattcttcatttcctccactagcaaaaaacgactcaacagatggaagggactgcaatgcaagtttggggacatttcttatatctaacttta |
38941039 |
T |
|
| Q |
221 |
aaagttgtggtagcatctccactccttcgacttccaacaccctctctaaatttggtaggtcatgcaaagtcaaatctttcaatgacgtaaaagccttctc |
320 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||| | ||| |||||||||||||||||||| |
|
|
| T |
38941038 |
aaagttgtggtagcatctctactccttcgacttccaacaccctctctaaatttggtaagtcacacaaagtcaacttttttaatgacgtaaaagccttctc |
38940939 |
T |
|
| Q |
321 |
ggtcgcaggttcatacaagtcatcatcaatgtacattagatctcccattccagatataaaaagagtagttaaacatggtaatttaccaaatgaaggaagc |
420 |
Q |
| |
|
|||||| ||||||| |||||||||||||||||| ||| ||||| ||||||| ||| ||||||||||| ||||||||||||||||||||||| ||||||| |
|
|
| T |
38940938 |
agtcgcaagttcatataagtcatcatcaatgtactttatatctctcattccaaatacaaaaagagtagataaacatggtaatttaccaaatggaggaagc |
38940839 |
T |
|
| Q |
421 |
tgcctgcagtttttacaatcaaagagaataatacgaactagacctttcaaaatagaagtatttttcatccaatgagaaaaatatgttcccccataaccat |
520 |
Q |
| |
|
||||||||||||||||| ||| |||||||||||| |||||||||||| | ||||||||||||| |||||||||||| ||||| ||||||| |||||| | |
|
|
| T |
38940838 |
tgcctgcagtttttacagtcatagagaataatactaactagaccttttagaatagaagtatttctcatccaatgaggaaaatgtgttcccatataaccct |
38940739 |
T |
|
| Q |
521 |
ccaccccaacatgcttaagtcctgaatgaggctcaagagcttcaagtactcgctcagcatgaacaccactaacttgtg---------aatcaccccatga |
611 |
Q |
| |
|
|| ||||| || ||| || ||||||||||||||||||||||| |||||||||||||||| ||||| |||||| |||| ||||||||||||| |
|
|
| T |
38940738 |
gcaacccaaaattcttcagacctgaatgaggctcaagagcttctagtactcgctcagcatcaacactactaacatgtgaattggtataatcaccccatga |
38940639 |
T |
|
| Q |
612 |
caaatataggtgattcaggtctttcttgccaatcaaattagcttttctagcatcctcctcatttgacacattctcaaggcctttgatgtatagcttacct |
711 |
Q |
| |
|
|||||||| | |||| | ||| |||||||||||||||||||||||||| |||||||| | ||| || || || | |||||||||||| | |||||| ||| |
|
|
| T |
38940638 |
caaatataagcgatttaagtccttcttgccaatcaaattagcttttcttgcatcctctttattcgagactttttgaaggcctttgatatgtagcttgcct |
38940539 |
T |
|
| Q |
712 |
cctaattgtaagttgtgtagctctgctaaaccaaacccagtttttgaatcaactatgaaattggtcaatgtttggagactagttaactccccaattttaa |
811 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||| |||||||| ||| | || |||||||||||||||| ||| |
|
|
| T |
38940538 |
cctaattgtaagttgtgtagctctgctaaaccaaaaccagtttttgaaccaacaatgaaaatggtcaattttttcaaacaagttaactccccaattctaa |
38940439 |
T |
|
| Q |
812 |
aaggagttgatttcaatgatggacaaccttcaataatgagatgtcgaaggtcctgcaattttgtgaattgttttggaaaactagataaaaaataacaact |
911 |
Q |
| |
|
|||||||||||||||||||| ||||| || ||| ||||||||| |||||| ||||| |||||| |||||||| ||||||||||| | | ||| ||||| |
|
|
| T |
38940438 |
aaggagttgatttcaatgatcgacaatttttaatcatgagatgttgaaggttctgcagttttgtcaattgtttgggaaaactagaaagataattacaacc |
38940339 |
T |
|
| Q |
912 |
ttgaagtttaagtgtttgcaatttttgatgtttacaaaaagacgcaggcaaggttgtgatatcacttgcgtaaagaaccaagtacctcaaatgtattaaa |
1011 |
Q |
| |
|
|| |||||| |||||||||||||| | | |||||| |||| |||||||||||||||||||||| | | |||| ||||||||| |||||| |||||| |
|
|
| T |
38940338 |
ttcaagttttagtgtttgcaatttcagcagcctacaaacagacacaggcaaggttgtgatatcactagagaaaagttccaagtaccgcaaatgcattaaa |
38940239 |
T |
|
| Q |
1012 |
ttattcaatgacgagagttgataagaacttgtatataaagctcggagaggagtg |
1065 |
Q |
| |
|
|| ||||||| ||||| ||| |||| |||||| ||||||||||||||||||| |
|
|
| T |
38940238 |
ttcttcaatgcagagagatgacaagaccttgtacgtaaagctcggagaggagtg |
38940185 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 391; E-Value: 0
Query Start/End: Original strand, 105 - 1605
Target Start/End: Complemental strand, 7055067 - 7053555
Alignment:
| Q |
105 |
attgttgttaacaatggacttcaataactcttcatttcctcctttagcagaaagtgatttaacagatggaatgggtggcaatgtaagtttgggaacattt |
204 |
Q |
| |
|
|||||||| || |||||||||||||||||||||||||||||| |||||||||||| | || |||||||| || |||||||| ||||| || |||| | |
|
|
| T |
7055067 |
attgttgtaaaaaatggacttcaataactcttcatttcctccacgagcagaaagtgactcaatagatggaagggacggcaatgtgagtttagggacatct |
7054968 |
T |
|
| Q |
205 |
tttatatcaaagtgaaaaagttgtggtagcatctccactccttcgacttccaacaccctctctaaatttggtaggtcatgcaaagtcaaatctttcaatg |
304 |
Q |
| |
|
||| ||| |||| |||||||| ||| |||||| ||||| || |||||||||||||||||||||||||||| | | ||||||||| | |||||||| |
|
|
| T |
7054967 |
gttagatctaagtctaaaagttggtgtaacatctctactccatcaacttccaacaccctctctaaatttggtaagctacacaaagtcaattttttcaatg |
7054868 |
T |
|
| Q |
305 |
acgtaaaagccttctcggtcgcaggttcatacaagtcatcatcaatgtacattagatctcccattccagatataaaaagagtagttaaacatggtaattt |
404 |
Q |
| |
|
||| |||||||||||| || ||||| ||||||| |||||||||||||||| ||| ||||| ||||||| ||||| ||| ||||||||||||||||||| |
|
|
| T |
7054867 |
acgcaaaagccttctcagttgcagggtcatacatgtcatcatcaatgtactttatatctctcattccaactataacaaggttagttaaacatggtaattt |
7054768 |
T |
|
| Q |
405 |
accaaatgaaggaagctgcctgcagtttttacaatcaaagagaataatacgaactagacctttcaaaatagaagtatttttcatccaatgagaaaaatat |
504 |
Q |
| |
|
|||||||| ||||||| ||||||| ||| ||| || ||||||||||| |||||| ||||| | |||||||||||| |||||||| ||| ||||| | |
|
|
| T |
7054767 |
accaaatgggggaagcttcctgcaggtttcacagccatagagaataatatgaactaagccttttagaatagaagtattgctcatccaacgaggaaaatgt |
7054668 |
T |
|
| Q |
505 |
gttcccccataaccatccaccccaacatgcttaagtcctgaatgaggctcaagagcttcaagtactcgctcagcatgaacaccactaacttgtg------ |
598 |
Q |
| |
|
||||||| |||||| | || |||| | ||| || |||||||| |||||||||||||| ||||||||| || ||| ||| | |||||||||| |
|
|
| T |
7054667 |
gttcccctataaccgtttacaccaaaactcttgagacctgaatggggctcaagagcttctagtactcgcgcaacatcaacgtccctaacttgtgaattag |
7054568 |
T |
|
| Q |
599 |
---aatcaccccatgacaaatataggtgattcaggtctttcttgccaatcaaattagcttttctagcatcctcctcatttgacacattctcaaggccttt |
695 |
Q |
| |
|
|||||||||| || | ||||| | |||| | ||| || ||||||||||||||||||| |||||||||| | || || |||||||||||||||||| | |
|
|
| T |
7054567 |
tataatcaccccacgaaagatataagcgatttaagtccttattgccaatcaaattagcttctctagcatccccgtcgttggacacattctcaaggcctct |
7054468 |
T |
|
| Q |
696 |
gatgtatagcttacctcctaattgtaagttgtgtagctctgctaaaccaaacccagtttttgaatcaactatgaaattggtcaatgtttggagactagtt |
795 |
Q |
| |
|
||||| ||| | |||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||| ||||||||||| |||| |||| |
|
|
| T |
7054467 |
gatgtgaagcatgcctcctaattgtaagttgtgtaactctgctaaaccaaacccagtttttgatccaacaatgaaaacggtcaatgttttcagacaagtt |
7054368 |
T |
|
| Q |
796 |
aactccccaattttaaaaggagttgatttcaatgatggacaaccttcaataatgagatgtcgaaggtcctgcaattttgtgaattgttttggaaaactag |
895 |
Q |
| |
|
|||||||||||| |||| ||||||||| ||||| |||| |||||| | || ||||| ||| || ||||||| || |||||||| || ||| || |
|
|
| T |
7054367 |
aactccccaattctaaagggagttgatactaatgaaaaacaattttcaatcacgatatgtctaagttcttgcaattgcgtcaattgtttggggaaatgag |
7054268 |
T |
|
| Q |
896 |
ataaaaaataacaactttgaagtttaagtgtttgcaatttttgatgtttacaaaaagacgcaggcaaggttgtgatatcacttgcgtaaagaaccaagta |
995 |
Q |
| |
|
| ||| || || || |||||| ||||||||||| || || || |||||| |||| |||||||||||||||| ||| | |||| | | ||| |
|
|
| T |
7054267 |
aaaaataagggcagtctttaagttttagtgtttgcaacttctgcagtctacaaacagacccaggcaaggttgtgatcctactatggcaaagttctaggta |
7054168 |
T |
|
| Q |
996 |
cctcaaatgtattaaattattcaatgacgagagttgataagaacttgtatataaagctcggagaggagtgcttgatagcaacgcatctaaattcttgcaa |
1095 |
Q |
| |
|
||||||||| |||||||| |||| | || ||| | ||||||||||| ||||||||||||| || || | | | ||||| ||||||| || ||| |
|
|
| T |
7054167 |
cctcaaatgcattaaattcctcaaagctgacagtccaaaagaacttgtacgtaaagctcggagaagattgatcggtggcaacacatctaattttttggtg |
7054068 |
T |
|
| Q |
1096 |
ggtcgcgtatactcaaggaaagttcgcaaggaatcaactttttggaagggaatca---tgtagtcatcttttgatttgttatcacacaggctgaaatggt |
1192 |
Q |
| |
|
| | | || ||||||| || ||||||||||| |||| ||| | ||||||||||| |||||||| ||| ||| | || | || | ||||| |
|
|
| T |
7054067 |
gatggtctaaactcaagaaaggttcgcaaggattcaattttattgaagggaatcattttgtagtcaagcttttctttactgtctatgaaacttatatggt |
7053968 |
T |
|
| Q |
1193 |
gaactctaattggcaagtttgtcaactttgaaacatcacaagagacacattcttctcccataatagactgagctaaatcatggactaaatcatgcatttt |
1292 |
Q |
| |
|
|||||||||||| ||| | | ||| ||||||| ||| ||| |||||||||||||||||||| ||||||||||||||||| || |||||||||||||| |
|
|
| T |
7053967 |
gaactctaattgacaaatcggccaagcttgaaacctcagaagccacacattcttctcccataatggactgagctaaatcatgaaccaaatcatgcatttt |
7053868 |
T |
|
| Q |
1293 |
gaatataatgttacctgctaaatctgatttgacttcttgaaaaaatgacctttgatataattcattccatacctcattaccaacatgctccatctgcaag |
1392 |
Q |
| |
|
||| ||||||| ||| ||| ||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||||||| || |
|
|
| T |
7053867 |
aaatgtaatgttccctactatatcagatttaacttcttgaaaaaatgatctttgatataattcattccatacctcattaccaagaagctccatctgtaaa |
7053768 |
T |
|
| Q |
1393 |
tttcctctagatgcaacaagtccattagccatccaaagttgaatgagatcttccttcaccatttcaaaatccttaggaaaaacagcacaaaaagtaaaac |
1492 |
Q |
| |
|
||||||||||||| || ||||||||||||||||||||| |||||||| |||||| || |||||||| || ||||||||||||||||||| ||||| |
|
|
| T |
7053767 |
tttcctctagatgtaagaagtccattagccatccaaagatgaatgaggcattccttatgtatctcaaaatctttgggaaaaacagcacaaaaagaaaaac |
7053668 |
T |
|
| Q |
1493 |
atggcctcaatgacaatttcaagttaaagtagctcagtctcaaagcagacatgacttggttatcatcagctaaattccaaaactcactttccaccacaga |
1592 |
Q |
| |
|
| |||||||||| ||||||||| ||| |||||||||| |||||||||||||||| | | ||||| |||| |||||||||||||| |||||| | ||| |
|
|
| T |
7053667 |
aaggcctcaatggcaatttcaaattatagtagctcagcctcaaagcagacatgattggattatcctcagataaattccaaaacttgctttcctttataga |
7053568 |
T |
|
| Q |
1593 |
aatccattgatgt |
1605 |
Q |
| |
|
|| |||||||||| |
|
|
| T |
7053567 |
aagccattgatgt |
7053555 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 269; E-Value: 1e-149
Query Start/End: Original strand, 1237 - 1605
Target Start/End: Complemental strand, 38940016 - 38939648
Alignment:
| Q |
1237 |
acacattcttctcccataatagactgagctaaatcatggactaaatcatgcattttgaatataatgttacctgctaaatctgatttgacttcttgaaaaa |
1336 |
Q |
| |
|
||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||| |
|
|
| T |
38940016 |
acacattcttctcccattacagactgagctaaatcatggattaaatcatgcattttgaatgtaatgttacctacaaaatctgatttgacttcttgaaaaa |
38939917 |
T |
|
| Q |
1337 |
atgacctttgatataattcattccatacctcattaccaacatgctccatctgcaagtttcctctagatgcaacaagtccattagccatccaaagttgaat |
1436 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||| |
|
|
| T |
38939916 |
atgacctttggtataattcattccatacctcattaccaacatgctccatctgtaagtttcctcttgatgtaacaagtccattagccatccaaagttgaat |
38939817 |
T |
|
| Q |
1437 |
gagatcttccttcaccatttcaaaatccttaggaaaaacagcacaaaaagtaaaacatggcctcaatgacaatttcaagttaaagtagctcagtctcaaa |
1536 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||| ||||||||| |
|
|
| T |
38939816 |
gagattttccttcaccatttcaaaatccttaggaaaaacagcacaaaaattaaaacatggcctcaaggacaatttcaaattaaagtagcttagtctcaaa |
38939717 |
T |
|
| Q |
1537 |
gcagacatgacttggttatcatcagctaaattccaaaactcactttccaccacagaaatccattgatgt |
1605 |
Q |
| |
|
|||||||||| ||||||| |||| ||||||||||| |||||||||| ||||||| |||||||||| |
|
|
| T |
38939716 |
gcagacatgatagggttatcctcagataaattccaaagctcactttcctttacagaaaaccattgatgt |
38939648 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 38943389 - 38943465
Alignment:
| Q |
18 |
aagatgttctaaggcactcagattaccgagttcaacaggtaattccttgagtttggcaaatttggatatggaaagtg |
94 |
Q |
| |
|
|||||||||||||||| | ||| ||| ||||||||||||||||||||||||| ||| || || |||||| |||||| |
|
|
| T |
38943389 |
aagatgttctaaggcagtaagagtactgagttcaacaggtaattccttgagtctggtgaagtttgatatgcaaagtg |
38943465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 7055202 - 7055149
Alignment:
| Q |
24 |
ttctaaggcactcagattaccgagttcaacaggtaattccttgagtttggcaaa |
77 |
Q |
| |
|
|||||| ||||| ||| ||| ||||||||||||||||||||||||||| ||||| |
|
|
| T |
7055202 |
ttctaaagcactaagagtactgagttcaacaggtaattccttgagttttgcaaa |
7055149 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0256 (Bit Score: 370; Significance: 0; HSPs: 3)
Name: scaffold0256
Description:
Target: scaffold0256; HSP #1
Raw Score: 370; E-Value: 0
Query Start/End: Original strand, 105 - 1065
Target Start/End: Original strand, 7520 - 8489
Alignment:
| Q |
105 |
attgttgttaacaatggacttcaataactcttcatttcctcctttagcagaaagtgatttaacagatggaatgggtggcaatgtaagtttgggaacattt |
204 |
Q |
| |
|
|||||||| || || |||||||||||| |||||||||||||| || |||||||||| | |||||||||| || |||||| |||||| || |||| | |
|
|
| T |
7520 |
attgttgtaaaaaaaggacttcaataattcttcatttcctccactaacagaaagtgactccacagatggaagggactgcaatgcaagtttagggacatct |
7619 |
T |
|
| Q |
205 |
tttatatcaaagtgaaaaagttgtggtagcatctccactccttcgacttccaacaccctctctaaatttggtaggtcatgcaaagtcaaatctttcaatg |
304 |
Q |
| |
|
||||||| || | |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| || ||||||||| | |||||||| |
|
|
| T |
7620 |
gttatatctaacttcaaaagttgtggtagcatctctactccttcggcttccaacaccctctctaaatttggtaaatcggacaaagtcaactttttcaatg |
7719 |
T |
|
| Q |
305 |
acgtaaaagccttctcggtcgcaggttcatacaagtcatcatcaatgtacattagatctcccattccagatataaaaagagtagttaaacatggtaattt |
404 |
Q |
| |
|
| |||||||||||||| ||||||||||||| ||||||| |||||||||| ||| |||| ||||||||| | | ||||| |||||||||||||||||| |
|
|
| T |
7720 |
atgtaaaagccttctcagtcgcaggttcatgtaagtcattatcaatgtactttaaatctttcattccagacacataaagataagttaaacatggtaattt |
7819 |
T |
|
| Q |
405 |
accaaatgaaggaagctgcctgcagtttttacaatcaaagagaataatacgaactagacctttcaaaatagaagtatttttcatccaatgagaaaaatat |
504 |
Q |
| |
|
||||||| ||||||||||||| ||||||||| ||| ||||||||||| |||||| |||||| | ||||||||||||| |||||||| ||| ||| | | |
|
|
| T |
7820 |
accaaatagaggaagctgcctgacgtttttacagtcatagagaataatatgaactaaaccttttagaatagaagtatttctcatccaaggaggaaattgt |
7919 |
T |
|
| Q |
505 |
gttcccccataaccatccaccccaacatgcttaagtcctgaatgaggctcaagagcttcaagtactcgctcagcatgaacaccactaacttgtg------ |
598 |
Q |
| |
|
||||| |||||| | |||||||| | |||||| ||||||||||||||||||||||| ||||||||||| |||| ||||| |||||| |||| |
|
|
| T |
7920 |
gttcctgtataaccctgcaccccaaaactcttaagacctgaatgaggctcaagagcttctagtactcgctcggcatcaacactactaacctgtgaattaa |
8019 |
T |
|
| Q |
599 |
---aatcaccccatgacaaatataggtgattcaggtctttcttgccaatcaaattagcttttctagcatcctcctcatttgacacattctcaaggccttt |
695 |
Q |
| |
|
||||||||||||||||||||| | |||| | ||| |||||||||||||||||||||||||| |||||||| ||||||||||| || | ||||| ||| |
|
|
| T |
8020 |
tataatcaccccatgacaaatataagcgatttaagtccttcttgccaatcaaattagcttttcttgcatcctcttcatttgacactttgtgaaggcgttt |
8119 |
T |
|
| Q |
696 |
gatgtatagcttacctcctaattgtaagttgtgtagctctgctaaaccaaacccagtttttgaatcaactatgaaattggtcaatgtttggagactagtt |
795 |
Q |
| |
|
||||| |||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||| |||| |||||| |||||||| ||| | || |||| |
|
|
| T |
8120 |
gatgtgtagcttgcctcctaattgtaagttttgtagctctgctaaaccatacccagtttttgaaccaacaatgaaaatggtcaattttttcaaacaagtt |
8219 |
T |
|
| Q |
796 |
aactccccaattttaaaaggagttgatttcaatgatggacaaccttcaataatgagatgtcgaaggtcctgcaattttgtgaattgttttggaaaactag |
895 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||| ||| || ||| ||||||||| |||||||||| | |||||| ||||||||||||||||||| |
|
|
| T |
8220 |
aactccccaattctaaaaggagttgatttcaatgatatgcaatttttaatcatgagatgttgaaggtcctgtagttttgtcaattgttttggaaaactag |
8319 |
T |
|
| Q |
896 |
ataaaaaataacaactttgaagtttaagtgtttgcaatttttgatgtttacaaaaagacgcaggcaaggttgtgatatcacttgcgtaaagaaccaagta |
995 |
Q |
| |
|
| | | | |||| || ||||||||||||||||||||| || ||||||||| |||||| |||||||||||||||| ||| ||||||| ||||||| |
|
|
| T |
8320 |
aaagatgaagacaatattcaagtttaagtgtttgcaatttctgcagtttacaaacagacgcgggcaaggttgtgatattactatcgtaaagttccaagta |
8419 |
T |
|
| Q |
996 |
cctcaaatgtattaaattattcaatgacgagagttgataagaacttgtatataaagctcggagaggagtg |
1065 |
Q |
| |
|
|| |||||| |||||| | ||||||| ||||| || |||| |||||| |||| |||||||||||||| |
|
|
| T |
8420 |
ccgcaaatgcattaaactcttcaatgcagagagatggcaagaccttgtacgtaaaactcggagaggagtg |
8489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0256; HSP #2
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 1237 - 1605
Target Start/End: Original strand, 8655 - 9023
Alignment:
| Q |
1237 |
acacattcttctcccataatagactgagctaaatcatggactaaatcatgcattttgaatataatgttacctgctaaatctgatttgacttcttgaaaaa |
1336 |
Q |
| |
|
||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||| | ||||| ||||||||||||||||| | |
|
|
| T |
8655 |
acacactcttctcccataacagattgagctaaatcatggactaaatcatgcattttgaaagtaatgttacctacaaaatcggatttgacttcttgaaaga |
8754 |
T |
|
| Q |
1337 |
atgacctttgatataattcattccatacctcattaccaacatgctccatctgcaagtttcctctagatgcaacaagtccattagccatccaaagttgaat |
1436 |
Q |
| |
|
|||||||||| | ||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
8755 |
atgacctttggtttaattcattccatacctcattaccaacatgctccatctgtaaatttcctctagatgtaacaagtccattagccatccaaagttgaat |
8854 |
T |
|
| Q |
1437 |
gagatcttccttcaccatttcaaaatccttaggaaaaacagcacaaaaagtaaaacatggcctcaatgacaatttcaagttaaagtagctcagtctcaaa |
1536 |
Q |
| |
|
||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||| ||||||||| |
|
|
| T |
8855 |
gagattttccttcaccattttaaaatctttaggaaaaacagcacaaaaagtaaaacatggtctcaaggacaatttcaaattaaagtagcttagtctcaaa |
8954 |
T |
|
| Q |
1537 |
gcagacatgacttggttatcatcagctaaattccaaaactcactttccaccacagaaatccattgatgt |
1605 |
Q |
| |
|
|||||||||| | | ||| |||| ||||||||||| |||||||||| ||||| | |||||||||| |
|
|
| T |
8955 |
gcagacatgataggatcatcctcagttaaattccaaagctcactttccttgacagagagccattgatgt |
9023 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0256; HSP #3
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 7415 - 7474
Alignment:
| Q |
45 |
gagttcaacaggtaattccttgagtttggcaaatttggatatggaaagtgccttaagatt |
104 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||| ||||| |||||| ||||||||| |
|
|
| T |
7415 |
gagttcaacaggtaattccatgagtttggcaaatttcgatatacaaagtgacttaagatt |
7474 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 244; Significance: 1e-134; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 244; E-Value: 1e-134
Query Start/End: Original strand, 457 - 1139
Target Start/End: Original strand, 20153158 - 20153846
Alignment:
| Q |
457 |
actagacctttcaaaatagaagtatttttcatccaatgagaaaaatatgttcccccataaccatccaccccaacatgcttaagtcctgaatgaggctcaa |
556 |
Q |
| |
|
||||||||||| | ||||||||||||| |||||||| ||| ||||| ||||||||||||||||| |||||||| ||||||||||| |||||| ||||||| |
|
|
| T |
20153158 |
actagaccttttagaatagaagtatttctcatccaaggaggaaaatctgttcccccataaccattcaccccaaaatgcttaagtcatgaatggggctcaa |
20153257 |
T |
|
| Q |
557 |
gagcttcaagtactcgctcagcatgaacaccactaacttgtgaat---------caccccatgacaaatataggtgattcaggtctttcttgccaatcaa |
647 |
Q |
| |
|
||||||| ||||||||||| | || ||||||| ||||||||||| |||| ||||||||||||| ||| || | ||| | ||||| |||||| |
|
|
| T |
20153258 |
gagcttccagtactcgctcggaatcaacaccatcaacttgtgaattaacataaccacctcatgacaaatataagtgttttatgtcct-cttgctaatcaa |
20153356 |
T |
|
| Q |
648 |
attagcttttctagcatcctcctcatttgacacattctcaaggcctttgatgtatagcttacctcctaattgtaagttgtgtagctctgctaaaccaaac |
747 |
Q |
| |
|
|||| || |||||||| ||| |||||||||||||||| |||| ||||||||||||||| |||||||||||||| |||| ||||||| |||||||| || |
|
|
| T |
20153357 |
attatctcctctagcatactcttcatttgacacattcttgaggcttttgatgtatagctttcctcctaattgtaacttgtttagctcttctaaaccatac |
20153456 |
T |
|
| Q |
748 |
ccagtttttgaatcaactatgaaattggtcaatgtttggagactagttaactccccaattttaaaaggagttgatttcaatgatggacaaccttcaataa |
847 |
Q |
| |
|
| |||||||||| |||| |||||| |||||||||||| |||| |||||||||||||||| ||||||||||| || | |||||| | ||| || ||| | |
|
|
| T |
20153457 |
c-agtttttgaaccaacaatgaaagtggtcaatgttttcagacaagttaactccccaattctaaaaggagttaatatgaatgataggcaatttttaatca |
20153555 |
T |
|
| Q |
848 |
tgagatgtcgaaggtcctgcaattttgtgaattgttttggaaaactagataaaaaataacaactttgaagtttaagtgtttgcaatttttgatgtttaca |
947 |
Q |
| |
|
||||||||||||||||||||||||| || |||||||| || |||||| ||||||||||||| ||| |||||| ||||||||||| || || || |||| |
|
|
| T |
20153556 |
tgagatgtcgaaggtcctgcaatttcgtcaattgtttggggaaactacgtaaaaaataacaattttcaagttttagtgtttgcaacttctgcagtctaca |
20153655 |
T |
|
| Q |
948 |
aaaagacgcaggcaaggttgtgatatcacttgcgtaaagaaccaagtacctcaaatgtattaaattattcaatgacgagagttgataagaacttgtatat |
1047 |
Q |
| |
|
|| | | | |||||||| | |||||||| | ||||| ||||||||||||||||||||||| | |||| || ||||||||| ||| ||||||| | |
|
|
| T |
20153656 |
aacacaatcgtgcaaggtttttatatcactgtcataaagttccaagtacctcaaatgtattaaagtcttcattgttgagagttgaaaaggacttgtacgt |
20153755 |
T |
|
| Q |
1048 |
aaagctcggagaggagtgcttgatagcaacgcatctaaattcttgcaaggtcgcgtatactcaaggaaagttcgcaaggaatcaactttttg |
1139 |
Q |
| |
|
|||||||||||||||||||||||||| ||| ||| |||||||||| | ||| | |||||||||| || || |||||||||||||||||||| |
|
|
| T |
20153756 |
aaagctcggagaggagtgcttgataggaacacat-taaattcttggagggtggtttatactcaagaaaggtccgcaaggaatcaactttttg |
20153846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0511 (Bit Score: 100; Significance: 1e-48; HSPs: 2)
Name: scaffold0511
Description:
Target: scaffold0511; HSP #1
Raw Score: 100; E-Value: 1e-48
Query Start/End: Original strand, 1239 - 1546
Target Start/End: Original strand, 8859 - 9166
Alignment:
| Q |
1239 |
acattcttctcccataatagactgagctaaatcatggactaaatcatgcattttgaatataatgttacctgctaaatctgatttgacttcttgaaaaaat |
1338 |
Q |
| |
|
|||||||||||| |||| ||||||||||||||||| | ||||||||||||||||||| ||| | ||| | ||| | ||| ||||||||||||||| |
|
|
| T |
8859 |
acattcttctcctgtaatggactgagctaaatcatgaattaaatcatgcattttgaatgtaacctcaccctttttatcagtttttacttcttgaaaaaat |
8958 |
T |
|
| Q |
1339 |
gacctttgatataattcattccatacctcattaccaacatgctccatctgcaagtttcctctagatgcaacaagtccattagccatccaaagttgaatga |
1438 |
Q |
| |
|
|| || ||||||||||||||| || || | |||||||||||||| || || ||||| || | | | ||||||||||| |||||| || || | |
|
|
| T |
8959 |
gatctcgcatataattcattccacacttcttgaccaacatgctccacctctaaatttccaacggaagagatgaatccattagccaaccaaagatggatca |
9058 |
T |
|
| Q |
1439 |
gatcttccttcaccatttcaaaatccttaggaaaaacagcacaaaaagtaaaacatggcctcaatgacaatttcaagttaaagtagctcagtctcaaagc |
1538 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||| |||||||| ||||||||||| ||||||||| | |
|
|
| T |
9059 |
gtgcttccttcaccatttcaaaatccttaggaaaaaccgcacaaaaagtaaaacacggcctcagtgataatttcaaattaaagtagctgagtctcaaaac |
9158 |
T |
|
| Q |
1539 |
agacatga |
1546 |
Q |
| |
|
|||||||| |
|
|
| T |
9159 |
agacatga |
9166 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0511; HSP #2
Raw Score: 55; E-Value: 7e-22
Query Start/End: Original strand, 221 - 749
Target Start/End: Original strand, 7823 - 8360
Alignment:
| Q |
221 |
aaagttgtggtagcatctccactccttcgacttccaacaccctctctaaatttggtaggtcatgcaaagtcaaatctttcaatgacgtaaaagccttctc |
320 |
Q |
| |
|
||||||||||||||||||| || ||||| ||| ||||| ||||||||| ||||||| || ||| ||| |||| |||||||| | |||||||||| |
|
|
| T |
7823 |
aaagttgtggtagcatctctacgccttcagctttcaacatcctctctaagtttggtaaaccaagcagagttaaattcttcaatgaaatgaaagccttctt |
7922 |
T |
|
| Q |
321 |
ggtcgcaggttcatacaagtcatcatcaatgtacattagatctcccattccagatataaaaagagtagttaaacatggtaatttaccaaatgaaggaagc |
420 |
Q |
| |
|
| | || || ||| | ||||| |||||||||| ||| ||||| ||||||| ||| | ||||||| |||||||| ||||||||||||| || ||||||| |
|
|
| T |
7923 |
agatgtagatttatatatgtcattatcaatgtactttaaatctctcattccaaatacataaagagtggttaaacaaggtaatttaccaagtggaggaagc |
8022 |
T |
|
| Q |
421 |
tgcctgcagtttttacaatcaaagagaataata-cgaactagacctttcaaaatagaagtatttttcatccaatgagaaaaatatgttcccccataacca |
519 |
Q |
| |
|
|| ||||| ||||| | ||| ||||| ||| | || |||| ||||||||| | |||| |||||||||| | ||||| | ||||| ||||||| |
|
|
| T |
8023 |
cgctgacagttgttacagttgtagaatgtaatatcgaccaag-ccttccaaaatagatgcatttctcatccaatgtggaaaatgtattcccacataaccc |
8121 |
T |
|
| Q |
520 |
tccaccccaacatgcttaagtcctgaatgaggctcaagagcttcaagtactcgctcagcatgaacaccactaacttgtgaatca---------ccccatg |
610 |
Q |
| |
|
|| | ||||| | ||| || || | ||||||||||| |||||||||||| ||||| ||| | | || || | || |||| | ||||||| |
|
|
| T |
8122 |
tcaatcccaaaacccttgagaccagtgtgaggctcaagggcttcaagtacttgctcaacatcagtatcaataccctgcgaattagcgtgactaccccatg |
8221 |
T |
|
| Q |
611 |
acaaatataggtgattcaggtctttcttgccaatcaaattagcttttctagcatcctcctcatttgacacattctcaaggcctttgatgtatagcttacc |
710 |
Q |
| |
|
|||| || | | |||| | || || || |||||||||||||||| | |||||||| ||| | || ||||||||||||||| |||||| |||||| || |
|
|
| T |
8222 |
acaagtacaagcgatttaactcctttttaccaatcaaattagcttctttagcatcccattcactagatacattctcaaggcctctgatgtgtagcttgcc |
8321 |
T |
|
| Q |
711 |
tcctaattgtaagttgtgtagctctgctaaaccaaaccc |
749 |
Q |
| |
|
||||| |||||||| |||| |||||||||||||||||| |
|
|
| T |
8322 |
tcctagttgtaagtcatgtaactctgctaaaccaaaccc |
8360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0230 (Bit Score: 100; Significance: 1e-48; HSPs: 3)
Name: scaffold0230
Description:
Target: scaffold0230; HSP #1
Raw Score: 100; E-Value: 1e-48
Query Start/End: Original strand, 1239 - 1546
Target Start/End: Original strand, 4178 - 4485
Alignment:
| Q |
1239 |
acattcttctcccataatagactgagctaaatcatggactaaatcatgcattttgaatataatgttacctgctaaatctgatttgacttcttgaaaaaat |
1338 |
Q |
| |
|
|||||||||||| |||| ||||||||||||||||| | ||||||||||||||||||| ||| | ||| | ||| | ||| ||||||||||||||| |
|
|
| T |
4178 |
acattcttctcctgtaatggactgagctaaatcatgaattaaatcatgcattttgaatgtaacctcaccctttttatcagtttttacttcttgaaaaaat |
4277 |
T |
|
| Q |
1339 |
gacctttgatataattcattccatacctcattaccaacatgctccatctgcaagtttcctctagatgcaacaagtccattagccatccaaagttgaatga |
1438 |
Q |
| |
|
|| || ||||||||||||||| || |||| |||||||||||||| || || ||||| || | | | ||||||||||| |||||| || || | |
|
|
| T |
4278 |
gatctcgcatataattcattccacacttcatgaccaacatgctccacctctaaatttccaacggaagagatgaatccattagccaaccaaagatggatca |
4377 |
T |
|
| Q |
1439 |
gatcttccttcaccatttcaaaatccttaggaaaaacagcacaaaaagtaaaacatggcctcaatgacaatttcaagttaaagtagctcagtctcaaagc |
1538 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||| ||||| || ||||||||||| ||||||||| | |
|
|
| T |
4378 |
gttcttccttcaccatttcaaaatccttaggaaaaaccgcacaaaaagtaaaacacggcctcagtgataattttaaattaaagtagctgagtctcaaaac |
4477 |
T |
|
| Q |
1539 |
agacatga |
1546 |
Q |
| |
|
| |||||| |
|
|
| T |
4478 |
aaacatga |
4485 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0230; HSP #2
Raw Score: 61; E-Value: 2e-25
Query Start/End: Original strand, 221 - 409
Target Start/End: Original strand, 3142 - 3330
Alignment:
| Q |
221 |
aaagttgtggtagcatctccactccttcgacttccaacaccctctctaaatttggtaggtcatgcaaagtcaaatctttcaatgacgtaaaagccttctc |
320 |
Q |
| |
|
||||||||||||||||||| || ||||| ||| ||||| ||||||||| ||||||| ||||||| ||| |||| |||||||| | |||||| ||| |
|
|
| T |
3142 |
aaagttgtggtagcatctctacgccttcagctttcaacatcctctctaagtttggtaaatcatgcagagttaaattcttcaatgaaatgaaagccctctt |
3241 |
T |
|
| Q |
321 |
ggtcgcaggttcatacaagtcatcatcaatgtacattagatctcccattccagatataaaaagagtagttaaacatggtaatttaccaa |
409 |
Q |
| |
|
|| | || |||||| | |||||||||||||||| ||| ||||| ||||||| ||| | ||||||| |||||||| ||||||||||||| |
|
|
| T |
3242 |
ggatgtagattcatatatgtcatcatcaatgtactttaaatctctcattccatatacataaagagtggttaaacaaggtaatttaccaa |
3330 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0230; HSP #3
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 640 - 749
Target Start/End: Original strand, 3570 - 3679
Alignment:
| Q |
640 |
ccaatcaaattagcttttctagcatcctcctcatttgacacattctcaaggcctttgatgtatagcttacctcctaattgtaagttgtgtagctctgcta |
739 |
Q |
| |
|
|||||||||||||||| | |||||||| ||| | || |||||||||||||||||||||| |||| | ||||||| |||||||| | || |||||||| |
|
|
| T |
3570 |
ccaatcaaattagcttctttagcatcccattcactagatacattctcaaggcctttgatgtgtagcctgcctcctagttgtaagtcatttaactctgcta |
3669 |
T |
|
| Q |
740 |
aaccaaaccc |
749 |
Q |
| |
|
|||||||||| |
|
|
| T |
3670 |
aaccaaaccc |
3679 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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