View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0342_2D_low_65 (Length: 258)

Name: NF0342_2D_low_65
Description: NF0342_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0342_2D_low_65
NF0342_2D_low_65
[»] chr7 (4 HSPs)
chr7 (1-252)||(42129467-42129725)
chr7 (101-213)||(35339028-35339141)
chr7 (101-213)||(7578536-7578649)
chr7 (162-213)||(14719450-14719501)
[»] chr3 (8 HSPs)
chr3 (101-198)||(21587194-21587291)
chr3 (101-213)||(44122060-44122172)
chr3 (101-213)||(20458822-20458933)
chr3 (101-191)||(44126790-44126880)
chr3 (118-213)||(7642305-7642399)
chr3 (101-213)||(20463187-20463299)
chr3 (110-195)||(13639621-13639706)
chr3 (127-213)||(20459094-20459180)
[»] chr2 (6 HSPs)
chr2 (101-213)||(19912279-19912391)
chr2 (101-194)||(25232016-25232109)
chr2 (101-193)||(45276370-45276462)
chr2 (101-164)||(21289665-21289728)
chr2 (101-191)||(21294963-21295053)
chr2 (101-194)||(25225711-25225804)
[»] chr1 (8 HSPs)
chr1 (101-213)||(11444092-11444204)
chr1 (101-199)||(18640560-18640657)
chr1 (101-194)||(29547773-29547866)
chr1 (101-209)||(11441723-11441831)
chr1 (116-201)||(32808790-32808874)
chr1 (101-212)||(28201705-28201817)
chr1 (105-200)||(18643264-18643359)
chr1 (101-194)||(29530118-29530211)
[»] chr4 (10 HSPs)
chr4 (101-213)||(12746603-12746715)
chr4 (101-210)||(18902125-18902234)
chr4 (103-200)||(26654453-26654550)
chr4 (101-213)||(27360193-27360305)
chr4 (101-201)||(52311291-52311392)
chr4 (101-211)||(51700336-51700446)
chr4 (101-210)||(56341853-56341962)
chr4 (101-197)||(7895112-7895208)
chr4 (101-210)||(17365674-17365784)
chr4 (59-92)||(52311179-52311212)
[»] chr6 (1 HSPs)
chr6 (101-194)||(19441200-19441293)
[»] chr5 (13 HSPs)
chr5 (101-198)||(24213350-24213447)
chr5 (101-201)||(31109059-31109159)
chr5 (116-213)||(29948490-29948587)
chr5 (101-238)||(29681704-29681841)
chr5 (101-213)||(16633334-16633446)
chr5 (101-193)||(24228343-24228435)
chr5 (121-213)||(35105030-35105122)
chr5 (121-213)||(40786632-40786726)
chr5 (101-193)||(17627200-17627292)
chr5 (101-149)||(39888298-39888346)
chr5 (162-213)||(17604690-17604741)
chr5 (101-201)||(35074183-35074284)
chr5 (171-213)||(21575047-21575089)
[»] chr8 (3 HSPs)
chr8 (101-210)||(29185597-29185706)
chr8 (115-240)||(28621713-28621835)
chr8 (101-144)||(12145704-12145748)
[»] scaffold0062 (2 HSPs)
scaffold0062 (101-191)||(19856-19946)
scaffold0062 (101-191)||(30024-30114)
[»] scaffold0481 (1 HSPs)
scaffold0481 (101-146)||(1039-1084)
[»] scaffold0066 (1 HSPs)
scaffold0066 (101-157)||(11669-11724)


Alignment Details
Target: chr7 (Bit Score: 208; Significance: 1e-114; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 42129725 - 42129467
Alignment:
Q  1 atatatcatgacaactaagactagacgatcaaacatatctttctaaaacgttgtttgcgttataaaataaattaaaaacacaagatcaaa------gatg 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||      ||||    
T  42129725 atatatcatgacaactaagactagacgatcaaacatatctttctaaaacgttgtttacgttataaaataaattaaaaacacaagatcaaataagaagatg 42129626  T
Q  95 attttgtttataggacacaaatgagcaagtgaatgatcaaagaaattaaggatcattaaccatatattcactaataggggttataggaaggtggaagatt 194  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42129625 attttgtttatagcacacaaatgagcaagtgaatgatcaaagaaattaaggatcattaaccatatattcactaataggggttataggaaggtggaagatt 42129526  T
Q  195 aaggatgagcatccactaatactatgtttattattcataacactccttga-tgtccatc 252  Q
    ||||||||||||||| | ||||||||||||||||||||||||| |||||| ||||||||    
T  42129525 aaggatgagcatccattgatactatgtttattattcataacaccccttgagtgtccatc 42129467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 35339028 - 35339141
Alignment:
Q  101 tttataggacacaa-atgagcaagtgaatgatcaaagaaattaaggatcattaaccatatattcactaataggggttataggaaggtggaagattaagga 199  Q
    ||||||||| |||| ||||||| |||||  ||||||| ||||||||| ||||||||||  ||||||| || || ||||||||||||||||||| ||| ||    
T  35339028 tttataggatacaatatgagcatgtgaaatatcaaagtaattaaggaccattaaccatccattcacttatgggagttataggaaggtggaagactaatga 35339127  T
Q  200 tgagcatccactaa 213  Q
    ||  ||||||||||    
T  35339128 tggacatccactaa 35339141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 7578649 - 7578536
Alignment:
Q  101 tttataggacacaa-atgagcaagtgaatgatcaaagaaattaaggatcattaaccatatattcactaataggggttataggaaggtggaagattaagga 199  Q
    ||||||||| |||| || ||||||||||||||||||| ||||||||| || | |||||  ||||||| || ||  |||| ||||||||||||| ||||||    
T  7578649 tttataggatacaatataagcaagtgaatgatcaaagtaattaaggaccactgaccatccattcacttatgggacttatgggaaggtggaagactaagga 7578550  T
Q  200 tgagcatccactaa 213  Q
    ||  ||||||||||    
T  7578549 tggacatccactaa 7578536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 213
Target Start/End: Original strand, 14719450 - 14719501
Alignment:
Q  162 tcactaataggggttataggaaggtggaagattaaggatgagcatccactaa 213  Q
    |||||||| |||||||||||||||||||||| |||||| |  ||||||||||    
T  14719450 tcactaatgggggttataggaaggtggaagactaaggacggacatccactaa 14719501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 5e-34; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 101 - 198
Target Start/End: Original strand, 21587194 - 21587291
Alignment:
Q  101 tttataggacacaaatgagcaagtgaatgatcaaagaaattaaggatcattaaccatatattcactaataggggttataggaaggtggaagattaagg 198  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||  ||||||||| ||||||||||||||||||||||||||||    
T  21587194 tttataggacacaaatgagcaagtgaatgatcaaagcagttaaggatcactaaccatactttcactaatgggggttataggaaggtggaagattaagg 21587291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 44122060 - 44122172
Alignment:
Q  101 tttataggacacaaatgagcaagtgaatgatcaaagaaattaaggatcattaaccatatattcactaataggggttataggaaggtggaagattaaggat 200  Q
    ||||||||||||||||||||| ||||||||||||||  |||||||| |||||| |||| |||||||||||  ||||||||||||||||||||||||||||    
T  44122060 tttataggacacaaatgagcaggtgaatgatcaaagtcattaaggaccattaagcatacattcactaatattggttataggaaggtggaagattaaggat 44122159  T
Q  201 gagcatccactaa 213  Q
    |  ||||||||||    
T  44122160 ggacatccactaa 44122172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 20458822 - 20458933
Alignment:
Q  101 tttataggacacaaatgagcaagtgaatgatcaaagaaattaaggatcattaaccatatattcactaataggggttataggaaggtggaagattaaggat 200  Q
    |||||||| ||||||||||||||||||||||||||  | |||||| ||| |||||| | |||||||||| ||||||||||||||||||||||||||||||    
T  20458822 tttataggtcacaaatgagcaagtgaatgatcaaaacatttaaggttcactaaccaaacattcactaat-ggggttataggaaggtggaagattaaggat 20458920  T
Q  201 gagcatccactaa 213  Q
    |  ||||||||||    
T  20458921 ggacatccactaa 20458933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 101 - 191
Target Start/End: Original strand, 44126790 - 44126880
Alignment:
Q  101 tttataggacacaaatgagcaagtgaatgatcaaagaaattaaggatcattaaccatatattcactaataggggttataggaaggtggaag 191  Q
    ||||||||||||||||||||||||||||||||||||  |||||||| |||||| |||| ||||||| |||| ||| |||||||||||||||    
T  44126790 tttataggacacaaatgagcaagtgaatgatcaaagtcattaaggaccattaaacatacattcactgatagtggtaataggaaggtggaag 44126880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 118 - 213
Target Start/End: Complemental strand, 7642399 - 7642305
Alignment:
Q  118 agcaagtgaatgatcaaagaaattaaggatcattaaccatatattcactaataggggttataggaaggtggaagattaaggatgagcatccactaa 213  Q
    ||||||| ||||||||||| ||||||||| || |||||||| |||||||||| |||||||||||||||||||||||||| ||||  ||||||||||    
T  7642399 agcaagtaaatgatcaaagtaattaaggaccactaaccataaattcactaat-ggggttataggaaggtggaagattaaagatggacatccactaa 7642305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 20463187 - 20463299
Alignment:
Q  101 tttataggacacaaatgagcaagtgaatgatcaaagaaattaaggatcattaaccatatattcactaataggggttataggaaggtggaagattaaggat 200  Q
    |||||||  |||||||||||||||||||||||| || | ||||||  || |||||||| |||||||||||||| ||||||||||| |||||| |||| ||    
T  20463187 tttatagatcacaaatgagcaagtgaatgatcacagcatttaaggtccactaaccatacattcactaatagggattataggaaggaggaagactaagaat 20463286  T
Q  201 gagcatccactaa 213  Q
    |  ||||||||||    
T  20463287 ggacatccactaa 20463299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 110 - 195
Target Start/End: Complemental strand, 13639706 - 13639621
Alignment:
Q  110 cacaaatgagcaagtgaatgatcaaagaaattaaggatcattaaccatatattcactaataggggttataggaaggtggaagatta 195  Q
    ||||||||||||||||||||||||||  ||||||||| || |||||||| ||| |||||    |||||||||||||||||||||||    
T  13639706 cacaaatgagcaagtgaatgatcaaaccaattaaggaccactaaccatacatttactaacgaaggttataggaaggtggaagatta 13639621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 20459180 - 20459094
Alignment:
Q  127 atgatcaaagaaattaaggatcattaaccatatattcactaataggggttataggaaggtggaagattaaggatgagcatccactaa 213  Q
    |||||||||| | ||||||  || |||||||  |||||||||  ||| ||| |||||||||||||| ||||||||| || |||||||    
T  20459180 atgatcaaagcatttaaggtccactaaccatgcattcactaacggggattacaggaaggtggaagactaaggatgaacagccactaa 20459094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 2e-33; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 19912391 - 19912279
Alignment:
Q  101 tttataggacacaaatgagcaagtgaatgatcaaagaaattaaggatcattaaccatatattcactaataggggttataggaaggtggaagattaaggat 200  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||  | |||||||| ||||| ||||||||||||||||||||||||||||||||| |    
T  19912391 tttataggacacaaatgagcaagtgagtgatcaaagcaattaaggactactaaccatacattcaataataggggttataggaaggtggaagattaagggt 19912292  T
Q  201 gagcatccactaa 213  Q
    |  ||||||||||    
T  19912291 ggacatccactaa 19912279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 101 - 194
Target Start/End: Complemental strand, 25232109 - 25232016
Alignment:
Q  101 tttataggacacaaatgagcaagtgaatgatcaaagaaattaaggatcattaaccatatattcactaataggggttataggaaggtggaagatt 194  Q
    ||||| |||||||||||||||||||||||||||||  ||||||||| || |||||||| ||| |||||| || |||||||||||||||||||||    
T  25232109 tttatgggacacaaatgagcaagtgaatgatcaaaccaattaaggaccactaaccatacatttactaatgggagttataggaaggtggaagatt 25232016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 193
Target Start/End: Complemental strand, 45276462 - 45276370
Alignment:
Q  101 tttataggacacaaatgagcaagtgaatgatcaaagaaattaaggatcattaaccatatattcactaataggggttataggaaggtggaagat 193  Q
    ||||||||||||||||||| ||||||||| |||||   |||||||| || |||||||| ||||||||| | ||||||||||||||||||||||    
T  45276462 tttataggacacaaatgagtaagtgaatggtcaaaactattaaggaccactaaccatacattcactaacatgggttataggaaggtggaagat 45276370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 101 - 164
Target Start/End: Original strand, 21289665 - 21289728
Alignment:
Q  101 tttataggacacaaatgagcaagtgaatgatcaaagaaattaaggatcattaaccatatattca 164  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| |||||    
T  21289665 tttataggacacaaatgagcaagtgaatgatcaaagtaattaaggatcattaagcatacattca 21289728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 101 - 191
Target Start/End: Original strand, 21294963 - 21295053
Alignment:
Q  101 tttataggacacaaatgagcaagtgaatgatcaaagaaattaaggatcattaaccatatattcactaataggggttataggaaggtggaag 191  Q
    ||||||||| ||||||||||||||||||||||||||  |||||||| ||||||  ||| |||||||||||| ||| ||| |||||||||||    
T  21294963 tttataggatacaaatgagcaagtgaatgatcaaagtcattaaggaccattaaatatacattcactaatagtggtgataagaaggtggaag 21295053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 101 - 194
Target Start/End: Complemental strand, 25225804 - 25225711
Alignment:
Q  101 tttataggacacaaatgagcaagtgaatgatcaaagaaattaaggatcattaaccatatattcactaataggggttataggaaggtggaagatt 194  Q
    |||||||||||||||||| ||| ||||||||||||  ||||||| |||| |||||||| ||| ||||||  | |||||| ||||||||||||||    
T  25225804 tttataggacacaaatgaacaaatgaatgatcaaaccaattaagaatcactaaccatacatttactaatgagagttatatgaaggtggaagatt 25225711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 73; Significance: 2e-33; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 11444092 - 11444204
Alignment:
Q  101 tttataggacacaaatgagcaagtgaatgatcaaagaaattaaggatcattaaccatatattcactaataggggttataggaaggtggaagattaaggat 200  Q
    ||||||||||||||||||||||||||||||||||||  |||||| | |||||| |||| |||||||||||  ||||||||||||||||||||||||||||    
T  11444092 tttataggacacaaatgagcaagtgaatgatcaaagtcattaagaaccattaagcatacattcactaataatggttataggaaggtggaagattaaggat 11444191  T
Q  201 gagcatccactaa 213  Q
    |  ||||||||||    
T  11444192 ggacatccactaa 11444204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 101 - 199
Target Start/End: Original strand, 18640560 - 18640657
Alignment:
Q  101 tttataggacacaaatgagcaagtgaatgatcaaagaaattaaggatcattaaccatatattcactaataggggttataggaaggtggaagattaagga 199  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| || |||||||| |||||||||| | |||||||||||||||||||||||||||    
T  18640560 tttataggacacaaatgagcaagtgaatgatcaaagcaattaaggaccactaaccatacattcactaat-gaggttataggaaggtggaagattaagga 18640657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 101 - 194
Target Start/End: Complemental strand, 29547866 - 29547773
Alignment:
Q  101 tttataggacacaaatgagcaagtgaatgatcaaagaaattaaggatcattaaccatatattcactaataggggttataggaaggtggaagatt 194  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||| || |||||||  ||| |||||| ||| ||||||||||||||||||||    
T  29547866 tttataggacataaatgagcaagtgaatgatcaaacaaattaaggaccactaaccatgcatttactaatggggattataggaaggtggaagatt 29547773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 101 - 209
Target Start/End: Original strand, 11441723 - 11441831
Alignment:
Q  101 tttataggacacaaatgagcaagtgaatgatcaaagaaattaaggatcattaaccatatattcactaataggggttataggaaggtggaagattaaggat 200  Q
    |||||||||||||||| |||||||||| ||||||||  |||||||| |||||| |||| |||||| || || ||||| | ||||||||||||||||||||    
T  11441723 tttataggacacaaataagcaagtgaaagatcaaagtcattaaggaccattaaacatacattcaccaaaagtggttacacgaaggtggaagattaaggat 11441822  T
Q  201 gagcatcca 209  Q
    | |||||||    
T  11441823 gggcatcca 11441831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 116 - 201
Target Start/End: Complemental strand, 32808874 - 32808790
Alignment:
Q  116 tgagcaagtgaatgatcaaagaaattaaggatcattaaccatatattcactaataggggttataggaaggtggaagattaaggatg 201  Q
    |||||||||||||  |||||  ||||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  32808874 tgagcaagtgaatattcaaatcaattaaggaccactaaccatatattcactaat-ggggttataggaaggtggaagattaaggatg 32808790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 212
Target Start/End: Original strand, 28201705 - 28201817
Alignment:
Q  101 tttataggacacaaatgagcaagtgaatgatcaaagaaattaaggatcattaaccatatattcactaatag-gggttataggaaggtggaagattaagga 199  Q
    ||||||||||| |||||| ||||||||| ||||||| |||||| ||  | |||||||| |||||||||| | |||||||||||||||||||||| |||||    
T  28201705 tttataggacataaatgaacaagtgaattatcaaagcaattaaagactactaaccatacattcactaatggagggttataggaaggtggaagataaagga 28201804  T
Q  200 tgagcatccacta 212  Q
    ||  |||||||||    
T  28201805 tggacatccacta 28201817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 105 - 200
Target Start/End: Original strand, 18643264 - 18643359
Alignment:
Q  105 taggacacaaatgagcaagtgaatgatcaaagaaattaaggatcattaaccatatattcactaataggggttataggaaggtggaagattaaggat 200  Q
    |||||||||||||||||| ||||||||||||| ||||||||| || |||||||| | |||||||| ||| |||||| ||||||  |||||||||||    
T  18643264 taggacacaaatgagcaaatgaatgatcaaagcaattaaggaccactaaccatacagtcactaatggggattatagaaaggtgatagattaaggat 18643359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 101 - 194
Target Start/End: Complemental strand, 29530211 - 29530118
Alignment:
Q  101 tttataggacacaaatgagcaagtgaatgatcaaagaaattaaggatcattaaccatatattcactaataggggttataggaaggtggaagatt 194  Q
    |||||| ||||||||||||||||||||||||||||  ||||||||| || |||||||  ||| ||| || ||| ||| ||||| ||||||||||    
T  29530211 tttatatgacacaaatgagcaagtgaatgatcaaaccaattaaggaccactaaccatgcatttactgatggggtttacaggaaagtggaagatt 29530118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 5e-31; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 12746603 - 12746715
Alignment:
Q  101 tttataggacacaaatgagcaagtgaatgatcaaagaaattaaggatcattaaccatatattcactaataggggttataggaaggtggaagattaaggat 200  Q
    |||||||||| |||||||||||||||||||||||||  |||||||| ||||||  ||| |||||||||||| |||||||||||||||||||||| |||||    
T  12746603 tttataggacgcaaatgagcaagtgaatgatcaaagtcattaaggaccattaagtatacattcactaatagtggttataggaaggtggaagattgaggat 12746702  T
Q  201 gagcatccactaa 213  Q
    |  ||||||||||    
T  12746703 ggacatccactaa 12746715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 101 - 210
Target Start/End: Original strand, 18902125 - 18902234
Alignment:
Q  101 tttataggacacaaatgagcaagtgaatgatcaaagaaattaaggatcattaaccatatattcactaataggggttataggaaggtggaagattaaggat 200  Q
    ||||||||||||||||||||||||||| |||||||  ||||||||| |||||| |||  |||||||||| | ||||||||||||||| ||||||||||||    
T  18902125 tttataggacacaaatgagcaagtgaaagatcaaaacaattaaggaccattaagcatccattcactaatggaggttataggaaggtgaaagattaaggat 18902224  T
Q  201 gagcatccac 210  Q
    || |||||||    
T  18902225 gaacatccac 18902234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 103 - 200
Target Start/End: Complemental strand, 26654550 - 26654453
Alignment:
Q  103 tataggacacaaatgagcaagtgaatgatcaaagaaattaaggatcattaaccatatattcactaataggggttataggaaggtggaagattaaggat 200  Q
    ||||||||||||||||| |||||||| ||||||| ||||||||| || |||||||| |||||| ||    ||||||||||||||||||||||||||||    
T  26654550 tataggacacaaatgagtaagtgaataatcaaagcaattaaggaccactaaccatacattcaccaacgatggttataggaaggtggaagattaaggat 26654453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 27360305 - 27360193
Alignment:
Q  101 tttataggacacaa-atgagcaagtgaatgatcaaagaaattaaggatcattaaccatatattcactaataggggttataggaaggtggaagattaagga 199  Q
    ||||||||| |||| |||| ||||||||||||||||| ||||||||| || ||||||| |||||| | || || ||||||||||||||||||| ||  ||    
T  27360305 tttataggatacaatatgaacaagtgaatgatcaaagtaattaaggaccactaaccatctattcatttat-ggagttataggaaggtggaagactactga 27360207  T
Q  200 tgagcatccactaa 213  Q
    ||| ||||||||||    
T  27360206 tgaacatccactaa 27360193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 101 - 201
Target Start/End: Original strand, 52311291 - 52311392
Alignment:
Q  101 tttataggacacaa-atgagcaagtgaatgatcaaagaaattaaggatcattaaccatatattcactaataggggttataggaaggtggaagattaagga 199  Q
    |||||||||||||| ||||  |||||| ||||||||||||||||||  || |||| ||  | |||| |||||||||||||||||||||||||| || |||    
T  52311291 tttataggacacaagatgactaagtgagtgatcaaagaaattaaggtccactaactattcactcaccaataggggttataggaaggtggaagactaggga 52311390  T
Q  200 tg 201  Q
    ||    
T  52311391 tg 52311392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 101 - 211
Target Start/End: Original strand, 51700336 - 51700446
Alignment:
Q  101 tttataggacacaaatgagcaagtgaatgatcaaagaaattaaggatcattaaccatatattcactaataggggttataggaaggtggaagattaaggat 200  Q
    |||||| || ||||||||||| |||||||||||||  ||||||| | |  ||| |||| ||||||||||  | ||||||| ||||| |||||||||||||    
T  51700336 tttatatgatacaaatgagcatgtgaatgatcaaaataattaagaaccgataatcatacattcactaatgagagttatagaaaggtagaagattaaggat 51700435  T
Q  201 gagcatccact 211  Q
    |  ||||||||    
T  51700436 ggacatccact 51700446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 210
Target Start/End: Original strand, 56341853 - 56341962
Alignment:
Q  101 tttataggacacaaatgagcaagtgaatgatcaaagaaattaaggatcattaaccatatattcactaataggggttataggaaggtggaagattaaggat 200  Q
    |||||| |||| ||||||||||||||||||| |||  ||||||  | || |||||||  | |||||||||  | |||||||||||||||||| ||| |||    
T  56341853 tttataagacataaatgagcaagtgaatgatgaaaacaattaaccaccactaaccatccactcactaataaagattataggaaggtggaagactaaagat 56341952  T
Q  201 gagcatccac 210  Q
    || |||||||    
T  56341953 gaacatccac 56341962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 101 - 197
Target Start/End: Complemental strand, 7895208 - 7895112
Alignment:
Q  101 tttataggacacaaatgagcaagtgaatgatcaaagaaattaaggatcattaaccatatattcactaataggggttataggaaggtggaagattaag 197  Q
    ||||||| |||||||| ||||| | |||| |||||  ||||||||| || |||||||||||||||||||   |||| ||| || |||||||||||||    
T  7895208 tttatagaacacaaataagcaaataaatgttcaaaataattaaggaccactaaccatatattcactaatgaaggttgtagaaaagtggaagattaag 7895112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 101 - 210
Target Start/End: Complemental strand, 17365784 - 17365674
Alignment:
Q  101 tttataggacacaa-atgagcaagtgaatgatcaaagaaattaaggatcattaaccatatattcactaataggggttataggaaggtggaagattaagga 199  Q
    |||||||||||||| ||||| |||||| ||||||||||||||||||  || |||| ||  | ||||||||   ||||||| |||  ||||||| ||||||    
T  17365784 tttataggacacaagatgagtaagtgagtgatcaaagaaattaaggtccactaactattcactcactaatgaaggttataagaaaatggaagactaagga 17365685  T
Q  200 tgagcatccac 210  Q
    ||| |||||||    
T  17365684 tgaacatccac 17365674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 92
Target Start/End: Original strand, 52311179 - 52311212
Alignment:
Q  59 gttataaaataaattaaaaacacaagatcaaaga 92  Q
    ||||||||||||| ||||||||||||||||||||    
T  52311179 gttataaaataaactaaaaacacaagatcaaaga 52311212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 101 - 194
Target Start/End: Original strand, 19441200 - 19441293
Alignment:
Q  101 tttataggacacaaatgagcaagtgaatgatcaaagaaattaaggatcattaaccatatattcactaataggggttataggaaggtggaagatt 194  Q
    |||||||||||||||||||||||||||||||||||  | ||||||| || |||||||| ||| || ||| ||||||||||||||||||||||||    
T  19441200 tttataggacacaaatgagcaagtgaatgatcaaaccatttaaggaccactaaccatagatttaccaatgggggttataggaaggtggaagatt 19441293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 2e-24; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 101 - 198
Target Start/End: Original strand, 24213350 - 24213447
Alignment:
Q  101 tttataggacacaaatgagcaagtgaatgatcaaagaaattaaggatcattaaccatatattcactaataggggttataggaaggtggaagattaagg 198  Q
    |||||||||||||||||||||||||||||||||||  |||||| || || |||||||| ||| |||||| | ||||||| ||||||||||||||||||    
T  24213350 tttataggacacaaatgagcaagtgaatgatcaaaccaattaaagaccaataaccatacatttactaatggaggttataagaaggtggaagattaagg 24213447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 201
Target Start/End: Original strand, 31109059 - 31109159
Alignment:
Q  101 tttataggacacaaatgagcaagtgaatgatcaaagaaattaaggatcattaaccatatattcactaataggggttataggaaggtggaagattaaggat 200  Q
    |||||| ||||||||||||||||||||||||| |||  ||||| || |||||| |||| ||||||||||||  |||||||||| |||| |||||||||||    
T  31109059 tttatatgacacaaatgagcaagtgaatgatcgaagtcattaaagaccattaaacatacattcactaatagaagttataggaatgtgggagattaaggat 31109158  T
Q  201 g 201  Q
    |    
T  31109159 g 31109159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 116 - 213
Target Start/End: Original strand, 29948490 - 29948587
Alignment:
Q  116 tgagcaagtgaatgatcaaagaaattaaggatcattaaccatatattcactaataggggttataggaaggtggaagattaaggatgagcatccactaa 213  Q
    ||||||||||||||||||||| ||||||||| || |||||||   |||||| |||||  ||||||||| |||||||||||||||||  ||||||||||    
T  29948490 tgagcaagtgaatgatcaaagtaattaaggaccagtaaccatcccttcacttataggacttataggaatgtggaagattaaggatggacatccactaa 29948587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 101 - 238
Target Start/End: Original strand, 29681704 - 29681841
Alignment:
Q  101 tttataggacacaaatgagcaagtgaatgatcaaagaaattaaggatcattaaccatatat------tcactaataggggttataggaaggtggaagatt 194  Q
    |||||||||||||||||| |||||| |||||||||  |||| |||| || |||||||| ||      |||||||| | |||||||| |||||||||||||    
T  29681704 tttataggacacaaatgaacaagtggatgatcaaaacaattgaggaccactaaccatacatatacattcactaatggaggttatagaaaggtggaagatt 29681803  T
Q  195 aaggatgagcatccactaatactatgtttattattcataacact 238  Q
    || ||||| ||||||||||      |||||||||||||||||||    
T  29681804 aaagatgaacatccactaa------gtttattattcataacact 29681841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 16633334 - 16633446
Alignment:
Q  101 tttataggacacaaat-gagcaagtgaatgatcaaagaaattaaggatcattaaccatatattcactaataggggttataggaaggtggaagattaagga 199  Q
    |||||||||||||| | ||| |||||||||||||||| ||||||||  || |||| ||  | || ||||| |||||||||||||||||||||| ||||||    
T  16633334 tttataggacacaagttgagtaagtgaatgatcaaagtaattaaggtccactaactattcactcgctaat-ggggttataggaaggtggaagactaagga 16633432  T
Q  200 tgagcatccactaa 213  Q
    ||  ||||||||||    
T  16633433 tggacatccactaa 16633446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 193
Target Start/End: Original strand, 24228343 - 24228435
Alignment:
Q  101 tttataggacacaaatgagcaagtgaatgatcaaagaaattaaggatcattaaccatatattcactaataggggttataggaaggtggaagat 193  Q
    ||||||||| |||| ||||||||||||||||||||  |||||| || || |||||||| ||  | ||||  ||||||||||||||||||||||    
T  24228343 tttataggatacaattgagcaagtgaatgatcaaaccaattaaagaccaataaccatacatatattaatgagggttataggaaggtggaagat 24228435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 213
Target Start/End: Complemental strand, 35105122 - 35105030
Alignment:
Q  121 aagtgaatgatcaaagaaattaaggatcattaaccatatattcactaataggggttataggaaggtggaagattaaggatgagcatccactaa 213  Q
    |||||||||||||||| |||||||||||| |||||||  ||||||| || || ||||| | |||||| |||| ||||||||  ||||||||||    
T  35105122 aagtgaatgatcaaagtaattaaggatcactaaccatccattcacttatgggagttattgcaaggtgtaagactaaggatggacatccactaa 35105030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 121 - 213
Target Start/End: Complemental strand, 40786726 - 40786632
Alignment:
Q  121 aagtgaatgatcaaagaaattaaggatcatta--accatatattcactaataggggttataggaaggtggaagattaaggatgagcatccactaa 213  Q
    |||||||||||||||  ||||||||| || ||  |||||| ||| |||||| ||||||||||||||||||||||  ||| |||| ||||||||||    
T  40786726 aagtgaatgatcaaatcaattaaggaccactataaccatacatttactaatgggggttataggaaggtggaagaccaagaatgaacatccactaa 40786632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 101 - 193
Target Start/End: Complemental strand, 17627292 - 17627200
Alignment:
Q  101 tttataggacacaaatgagcaagtgaatgatcaaagaaattaaggatcattaaccatatattcactaataggggttataggaaggtggaagat 193  Q
    ||||| |||||||||||||||| | ||||||||||  | ||||||| || |||||||||||||||| ||   | ||||||||||||| |||||    
T  17627292 tttattggacacaaatgagcaaataaatgatcaaaatatttaaggaccactaaccatatattcacttattaagtttataggaaggtgaaagat 17627200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 101 - 149
Target Start/End: Original strand, 39888298 - 39888346
Alignment:
Q  101 tttataggacacaaatgagcaagtgaatgatcaaagaaattaaggatca 149  Q
    |||||||||||||||||| ||||||||||| ||||| ||||||||||||    
T  39888298 tttataggacacaaatgatcaagtgaatgaacaaagcaattaaggatca 39888346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 213
Target Start/End: Complemental strand, 17604741 - 17604690
Alignment:
Q  162 tcactaataggggttataggaaggtggaagattaaggatgagcatccactaa 213  Q
    |||||||| |||||||||||||||||||||| ||||||||  ||||||||||    
T  17604741 tcactaatgggggttataggaaggtggaagactaaggatggacatccactaa 17604690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 101 - 201
Target Start/End: Original strand, 35074183 - 35074284
Alignment:
Q  101 tttataggacacaaatgagcaagtgaatgatcaaagaaattaaggatcattaaccatatattcactaataggggttataggaaggtggaaga-ttaagga 199  Q
    |||| |||| |||||||||||| | ||||||||||| ||||||||| || ||| |||| |||||||| |  |  ||||||||||||| |||| |||||||    
T  35074183 tttacaggatacaaatgagcaaattaatgatcaaagcaattaaggaccactaatcatacattcactagtgagaattataggaaggtgaaagacttaagga 35074282  T
Q  200 tg 201  Q
    ||    
T  35074283 tg 35074284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 213
Target Start/End: Original strand, 21575047 - 21575089
Alignment:
Q  171 ggggttataggaaggtggaagattaaggatgagcatccactaa 213  Q
    |||||||||||||||||||||| ||||||||  ||||||||||    
T  21575047 ggggttataggaaggtggaagactaaggatggacatccactaa 21575089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 4e-22; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 101 - 210
Target Start/End: Original strand, 29185597 - 29185706
Alignment:
Q  101 tttataggacacaaatgagcaagtgaatgatcaaagaaattaaggatcattaaccatatattcactaataggggttataggaaggtggaagattaaggat 200  Q
    |||||||||||||||||||||| || |||||||||  ||||||||| ||  ||||||||||| |||||| ||| ||||||||||||||||||| ||| ||    
T  29185597 tttataggacacaaatgagcaaatggatgatcaaacgaattaaggaccacaaaccatatatttactaatggggattataggaaggtggaagatcaagaat 29185696  T
Q  201 gagcatccac 210  Q
    |  |||||||    
T  29185697 ggacatccac 29185706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 240
Target Start/End: Complemental strand, 28621835 - 28621713
Alignment:
Q  115 atgagcaagtgaatgatcaaagaaattaaggatcattaaccatatattcactaataggggttataggaaggtggaagattaaggatgagcatccactaat 214  Q
    ||||||||||||||||| |||| ||||||||| || |||||||  ||||||| ||  | |||||| ||||||||||   ||| ||||  |||||||||||    
T  28621835 atgagcaagtgaatgattaaagtaattaaggaccactaaccatccattcacttatgtgagttata-gaaggtggaaagctaatgatggacatccactaat 28621737  T
Q  215 actatgtttattattcataacactcc 240  Q
      ||  | ||||||||||||||||||    
T  28621736 --taattatattattcataacactcc 28621713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 144
Target Start/End: Original strand, 12145704 - 12145748
Alignment:
Q  101 tttataggacacaaa-tgagcaagtgaatgatcaaagaaattaag 144  Q
    ||||||||||||||| ||||||||||| ||||||||| |||||||    
T  12145704 tttataggacacaaaatgagcaagtgagtgatcaaagtaattaag 12145748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 101 - 191
Target Start/End: Complemental strand, 19946 - 19856
Alignment:
Q  101 tttataggacacaaatgagcaagtgaatgatcaaagaaattaaggatcattaaccatatattcactaataggggttataggaaggtggaag 191  Q
    |||||| ||||||||||| |||||||||||||||||  ||||||||  |||||  ||| |||||||||||| |||||||||||| ||||||    
T  19946 tttatatgacacaaatgaacaagtgaatgatcaaagtcattaaggactattaagtatacattcactaatagtggttataggaagatggaag 19856  T

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Target: scaffold0062; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 101 - 191
Target Start/End: Complemental strand, 30114 - 30024
Alignment:
Q  101 tttataggacacaaatgagcaagtgaatgatcaaagaaattaaggatcattaaccatatattcactaataggggttataggaaggtggaag 191  Q
    |||||| ||||||||||| |||||||||||||||||  ||||||||  |||||  ||| |||||||||||| |||||||||||| ||||||    
T  30114 tttatatgacacaaatgaacaagtgaatgatcaaagtcattaaggactattaagtatacattcactaatagtggttataggaagatggaag 30024  T

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Target: scaffold0481 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 101 - 146
Target Start/End: Complemental strand, 1084 - 1039
Alignment:
Q  101 tttataggacacaaatgagcaagtgaatgatcaaagaaattaagga 146  Q
    |||||||||||||||||||||| |||| || ||||| |||||||||    
T  1084 tttataggacacaaatgagcaaatgaacgagcaaagcaattaagga 1039  T

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Target: scaffold0066 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 157
Target Start/End: Complemental strand, 11724 - 11669
Alignment:
Q  101 tttataggacacaaatgagcaagtgaatgatcaaagaaattaaggatcattaaccat 157  Q
    ||||||||||| |||||||||||||||||||||||  ||||||| | || |||||||    
T  11724 tttataggaca-aaatgagcaagtgaatgatcaaacgaattaagcaacactaaccat 11669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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