View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0342_2D_low_77 (Length: 219)
Name: NF0342_2D_low_77
Description: NF0342_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0342_2D_low_77 |
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Alignment Details
Target: chr7 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 21921873 - 21922073
Alignment:
| Q |
1 |
tagatttaaagattaacttattttgttgattgcaggattggcacaagggtcacgtccaaaattccggtgcgtagcacaatgcacgaatccaccatcatat |
100 |
Q |
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| T |
21921873 |
tagatttaaagattaacttattttgttgattgaaggattggcacaagggtcacgtccaaaattccagtgcgtagcacaatgcacgaatccaccatcatat |
21921972 |
T |
|
| Q |
101 |
tgcaatcagctttgtaaaatcaagggatatggattaggtggtgaatgtatgtttaaaggacctctaaatcaatgttgttgtgttcctaatccccctaaat |
200 |
Q |
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|||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21921973 |
tgcagtcagctttgtaaaaccaagggatatggattaggtggtgaatgtatgtttaaaggacctctaaatcaatgttgttgtgttcctaatccccctaaat |
21922072 |
T |
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| Q |
201 |
t |
201 |
Q |
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| T |
21922073 |
t |
21922073 |
T |
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