View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0342_high_16 (Length: 250)
Name: NF0342_high_16
Description: NF0342
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF0342_high_16 |
 |  |
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[»] scaffold0069 (1 HSPs) |
 |  |  |
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[»] scaffold0002 (1 HSPs) |
 |  |  |
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[»] scaffold2142 (1 HSPs) |
 |  |  |
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[»] scaffold0502 (1 HSPs) |
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[»] scaffold0041 (1 HSPs) |
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[»] scaffold0154 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 184; Significance: 1e-99; HSPs: 24)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 32127383 - 32127144
Alignment:
Q |
1 |
aaggcatgcatgcataaaagttacattgaaatggttataaatattagcacataaccatgggcggttctagcgtatggcgaccccgggcggtcgcccggtc |
100 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
T |
32127383 |
aaggcatgcatgcataaaagttacattgaaatggttataaatatttgcacataaccatgggcggttctagcgtatggcgaccccgggcggtcgcccgggc |
32127284 |
T |
 |
Q |
101 |
tcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnnnnnnnnnnnnttgggcaatctgaaaattgtcacacgcaaata |
200 |
Q |
|
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |
|
|
T |
32127283 |
tcgatcaataatttttgcacattaaactcgacccaaaagctcattaacacatttacaaaaagaaaaatttaggcaatctgaaaattgtcacacgcaaata |
32127184 |
T |
 |
Q |
201 |
tatcttggaattttatttagcacactattgacgggttcat |
240 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||| |
|
|
T |
32127183 |
gatcttggaattttatttagcacactattgacgggttcat |
32127144 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 56 - 240
Target Start/End: Original strand, 42439966 - 42440150
Alignment:
Q |
56 |
catgggcggttctagcgtatggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacattta |
155 |
Q |
|
|
|||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||| |||||||||| |||||||||||||| |
|
|
T |
42439966 |
catgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactaaacccaaaagcccattaacacattta |
42440065 |
T |
 |
Q |
156 |
cnnnnnnnnnnnnttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcat |
240 |
Q |
|
|
| |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||| |
|
|
T |
42440066 |
caaaaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttgcaattttatttagcacactattgacggattcat |
42440150 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 56 - 240
Target Start/End: Original strand, 35962695 - 35962879
Alignment:
Q |
56 |
catgggcggttctagcgtatggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacattta |
155 |
Q |
|
|
|||||||||||||| |||||||||||||| |||||||| |||| ||||||| ||||||||||||||||| ||| ||||||||||| ||||||||||||| |
|
|
T |
35962695 |
catgggcggttctaccgtatggcgaccccaggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcttattaacacattta |
35962794 |
T |
 |
Q |
156 |
cnnnnnnnnnnnnttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcat |
240 |
Q |
|
|
| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| |
|
|
T |
35962795 |
caaaaagaaaattttgggcaatctgaaaattgtcacacacaaataggtcttggaattttatttagcacactattgacgggttcat |
35962879 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 56 - 243
Target Start/End: Complemental strand, 41251821 - 41251634
Alignment:
Q |
56 |
catgggcggttctagcgtatggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacattta |
155 |
Q |
|
|
|||||||||||||| ||| | | |||||||||||||||||||| ||||||| ||||||||||||||||| ||| |||||||||| |||||||||||||| |
|
|
T |
41251821 |
catgggcggttctaccgtgtagtgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta |
41251722 |
T |
 |
Q |
156 |
cnnnnnnnnnnnnttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
| |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| | |||||||| |
|
|
T |
41251721 |
caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctc |
41251634 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 55 - 240
Target Start/End: Original strand, 16405579 - 16405764
Alignment:
Q |
55 |
ccatgggcggttctagcgtatggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacattt |
154 |
Q |
|
|
||||||||||||||| | ||||| ||||| |||||||||||||| ||| ||| ||||||||||||| ||| ||| |||||||||||||||||||||||| |
|
|
T |
16405579 |
ccatgggcggttctaccatatggtgaccctgggcggtcgcccgggctcaatcgataatttttgcacgttagactcaacccaaaagctcattaacacattt |
16405678 |
T |
 |
Q |
155 |
acnnnnnnnnnnnnttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcat |
240 |
Q |
|
|
| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
T |
16405679 |
ataaaaagaaaaatttggacaatctgaaaattgtcacacgcaaataagtcttggaattttatttagcacactattgacgggttcat |
16405764 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 51 - 243
Target Start/End: Complemental strand, 6403996 - 6403804
Alignment:
Q |
51 |
ataaccatgggcggttctagcgtatggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacac |
150 |
Q |
|
|
||||||||||||||||| | ||| | |||||||||||||||||||||| ||||||| ||||||||||||||||| ||| ||| ||||| |||||||||| |
|
|
T |
6403996 |
ataaccatgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagttcattaacac |
6403897 |
T |
 |
Q |
151 |
atttacnnnnnnnnnnnnttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
||||| |||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||| | |||||||| |
|
|
T |
6403896 |
atttataaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc |
6403804 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 60 - 243
Target Start/End: Complemental strand, 31581805 - 31581622
Alignment:
Q |
60 |
ggcggttctagcgtatggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnnn |
159 |
Q |
|
|
|||||||||| ||||||||||| ||||||||||||| | ||||| | ||| |||||||| |||| ||| ||||||||| ||||||||||||||| |
|
|
T |
31581805 |
ggcggttctactgtatggcgaccacgggcggtcgcccaggctcgagcgatactttttgcatattagactcatcccaaaagcccattaacacatttacaaa |
31581706 |
T |
 |
Q |
160 |
nnnnnnnnnttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
31581705 |
aagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc |
31581622 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 56 - 243
Target Start/End: Complemental strand, 17445226 - 17445041
Alignment:
Q |
56 |
catgggcggttctagcgtatggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacattta |
155 |
Q |
|
|
|||||||||||||| ||| |||||||| |||||||||||||| ||||||| ||||||||||||| || ||| |||||||||| |||||||||||||| |
|
|
T |
17445226 |
catgggcggttctaccgtgtggcgacctcgggcggtcgcccgagctcgatcgataatttttgcac--tagactcaacccaaaagcccattaacacattta |
17445129 |
T |
 |
Q |
156 |
cnnnnnnnnnnnnttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
| |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| | |||||||| |
|
|
T |
17445128 |
caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctc |
17445041 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 56 - 240
Target Start/End: Original strand, 18981597 - 18981780
Alignment:
Q |
56 |
catgggcggttctagcgtatggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacattta |
155 |
Q |
|
|
|||||||||||||| ||||||||||||| ||||||||| |||| |||||| ||||||||||||||||| ||| ||||||||| |||||| ||||||| |
|
|
T |
18981597 |
catgggcggttctaccgtatggcgaccc-gggcggtcgtccgggctcgattgataatttttgcacattagactcaacccaaaagtccattaaaacattta |
18981695 |
T |
 |
Q |
156 |
cnnnnnnnnnnnnttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcat |
240 |
Q |
|
|
| ||||||||| | |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| |
|
|
T |
18981696 |
caaaaagaaaaatttgggcaatttaaaaattgtcacacgcaaataggtcttggaattttatttagcacactgttgacgggttcat |
18981780 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 76 - 243
Target Start/End: Complemental strand, 44084770 - 44084603
Alignment:
Q |
76 |
ggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnnnnnnnnnnnnttgggca |
175 |
Q |
|
|
||||||||||||| ||||||||| ||||||| |||||||||||||||||||| | ||||||| ||||||||||| |||| ||||||| |
|
|
T |
44084770 |
ggcgaccccgggcagtcgcccgggctcgatcgataatttttgcacattaaacccaatccaaaagttcattaacacacttacaaaaagaaaaatttgggca |
44084671 |
T |
 |
Q |
176 |
atctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
||||||||||| ||| ||||||||| ||| |||||||||||||||||||||||||||||||||||| |
|
|
T |
44084670 |
atctgaaaattctcatacgcaaataggtctcagaattttatttagcacactattgacgggttcatctc |
44084603 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 56 - 213
Target Start/End: Complemental strand, 2958287 - 2958131
Alignment:
Q |
56 |
catgggcggttctagcgtatggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacattta |
155 |
Q |
|
|
|||||||||||||| ||||||||||||||||||||||| |||| ||||||| |||| |||||||||||| ||| |||||||||| |||||||||||||| |
|
|
T |
2958287 |
catgggcggttctaccgtatggcgaccccgggcggtcgtccgggctcgatcgataa-ttttgcacattagactcaacccaaaagcccattaacacattta |
2958189 |
T |
 |
Q |
156 |
cnnnnnnnnnnnnttgggcaatctgaaaattgtcacacgcaaatatatcttggaattt |
213 |
Q |
|
|
| ||||| |||||||||||||||||||||||||| ||||||||||| |
|
|
T |
2958188 |
caaagagaaaaatttgggtaatctgaaaattgtcacacgcaaataggtcttggaattt |
2958131 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 76 - 243
Target Start/End: Original strand, 45418583 - 45418750
Alignment:
Q |
76 |
ggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnnnnnnnnnnnnttgggca |
175 |
Q |
|
|
||||||||||||||||||||||| ||||||| ||||||||||| ||||| | |||||||||| ||||||||| |||| ||||||| |
|
|
T |
45418583 |
ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagatccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggca |
45418682 |
T |
 |
Q |
176 |
atctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |
|
|
T |
45418683 |
atctgaaaattctcacacgcaaataggtctctgaattttatttagcacactattgacgggttcatctc |
45418750 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 82 - 242
Target Start/End: Original strand, 771005 - 771165
Alignment:
Q |
82 |
cccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnnnnnnnnnnnnttgggcaatctga |
181 |
Q |
|
|
||||||||||||||||| ||||||| |||| |||||||||||| || ||| |||||| |||||||||| |||| ||||||||||||| |
|
|
T |
771005 |
cccgggcggtcgcccgggctcgatcgataacttttgcacattagacccaaccaaaaagcccattaacacacttacaaaaagaaaaatttgggcaatctga |
771104 |
T |
 |
Q |
182 |
aaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatct |
242 |
Q |
|
|
||||| ||||||||||||| ||| |||| ||||||||||||| ||||||||||||||||| |
|
|
T |
771105 |
aaattctcacacgcaaataggtctcggaactttatttagcacattattgacgggttcatct |
771165 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 76 - 242
Target Start/End: Original strand, 8147351 - 8147518
Alignment:
Q |
76 |
ggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnnnnnnnnnnnnttgggca |
175 |
Q |
|
|
||||||||||||||||||||||| ||||||| ||||| ||||||||||| || || |||||| ||||||||| |||| ||||||| |
|
|
T |
8147351 |
ggcgaccccgggcggtcgcccgggctcgatcgataatctttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgggca |
8147450 |
T |
 |
Q |
176 |
atctgaaaa-ttgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatct |
242 |
Q |
|
|
||||||||| || ||||||||||||| |||| ||||||||||||| |||||||||||||||||||||| |
|
|
T |
8147451 |
atctgaaaaattctcacacgcaaatagatctcggaattttatttaacacactattgacgggttcatct |
8147518 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 173 - 243
Target Start/End: Complemental strand, 12756907 - 12756837
Alignment:
Q |
173 |
gcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
|||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |
|
|
T |
12756907 |
gcaatctgaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc |
12756837 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 173 - 240
Target Start/End: Original strand, 2285959 - 2286026
Alignment:
Q |
173 |
gcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcat |
240 |
Q |
|
|
|||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||| |
|
|
T |
2285959 |
gcaatctgaaaattgtcacacgcaaataggttttggaattttatttagcacactattgacgtgttcat |
2286026 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 85 - 151
Target Start/End: Complemental strand, 7072710 - 7072644
Alignment:
Q |
85 |
gggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacaca |
151 |
Q |
|
|
|||||||||||||| ||||||| ||||||||| |||||||||| |||||||||| |||||||||| |
|
|
T |
7072710 |
gggcggtcgcccgggctcgatcgataatttttttacattaaactcaacccaaaagcccattaacaca |
7072644 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 78 - 240
Target Start/End: Complemental strand, 8059498 - 8059336
Alignment:
Q |
78 |
cgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnnnnnnnnnnnnttgggcaat |
177 |
Q |
|
|
||||||||| || |||||| | ||| ||| ||||||||||||||||| | | |||||||||| ||||||||| |||| |||| |||| |
|
|
T |
8059498 |
cgaccccggccgatcgcccaggctcaatcgataatttttgcacattagagtcaacccaaaagccaattaacacacttacaaaaagaaaaatttggccaat |
8059399 |
T |
 |
Q |
178 |
ctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcat |
240 |
Q |
|
|
|||||||| |||||| ||||| ||| ||||||||||||||||||| |||||||||||||| |
|
|
T |
8059398 |
ttgaaaattctcacacacaaatcggtctcggaattttatttagcacacaattgacgggttcat |
8059336 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 151
Target Start/End: Original strand, 34905973 - 34906024
Alignment:
Q |
100 |
ctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacaca |
151 |
Q |
|
|
||||||| |||||||||||||||||| | | |||||||||| |||||||||| |
|
|
T |
34905973 |
ctcgatcgataatttttgcacattaagcctaacccaaaagcccattaacaca |
34906024 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 243
Target Start/End: Original strand, 26238080 - 26238110
Alignment:
Q |
213 |
ttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
||||||||||||||||||||||||||||||| |
|
|
T |
26238080 |
ttatttagcacactattgacgggttcatctc |
26238110 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 156
Target Start/End: Complemental strand, 4555354 - 4555298
Alignment:
Q |
100 |
ctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttac |
156 |
Q |
|
|
||||||| ||||||||||||||| |||| |||||||||||| |||||||| |||| |
|
|
T |
4555354 |
ctcgatcgataatttttgcacatcaaacccaacccaaaagctcgttaacacacttac |
4555298 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 243
Target Start/End: Complemental strand, 26162773 - 26162702
Alignment:
Q |
169 |
ttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
||||||||||| |||||| ||| || |||||| ||| ||| |||||||||||| |||||||||||||||||| |
|
|
T |
26162773 |
ttgggcaatctaaaaattctcaaacacaaataggtctcgga---ttatttagcacattattgacgggttcatctc |
26162702 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 124
Target Start/End: Original strand, 26237957 - 26238004
Alignment:
Q |
76 |
ggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacatta |
124 |
Q |
|
|
||||||||||||||||||||||| ||||||| || ||||||||| |||| |
|
|
T |
26237957 |
ggcgaccccgggcggtcgcccgggctcgatcgat-atttttgcaaatta |
26238004 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 106
Target Start/End: Original strand, 34523214 - 34523270
Alignment:
Q |
50 |
cataaccatgggcggttctagcgtatggcgaccccgggcggtcgcccggtctcgatc |
106 |
Q |
|
|
|||||||| |||||||| || || ||||||||||||||||||||||| ||||||| |
|
|
T |
34523214 |
cataaccaggggcggttttaccgcccggcgaccccgggcggtcgcccgggctcgatc |
34523270 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 112; Significance: 1e-56; HSPs: 37)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 56 - 243
Target Start/End: Original strand, 25930688 - 25930875
Alignment:
Q |
56 |
catgggcggttctagcgtatggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacattta |
155 |
Q |
|
|
|||||||||||||| ||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| |||||||||||||| |
|
|
T |
25930688 |
catgggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatctataatttttgcacattaaactcaacccaaaagcccattaacacattta |
25930787 |
T |
 |
Q |
156 |
cnnnnnnnnnnnnttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
25930788 |
caaaaagaaaaatttgggcaatttgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc |
25930875 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 60 - 243
Target Start/End: Complemental strand, 36382528 - 36382346
Alignment:
Q |
60 |
ggcggttctagcgtatggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnnn |
159 |
Q |
|
|
|||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||| ||||| ||||||||||||||| |
|
|
T |
36382528 |
ggcggttctaccgtatggcgaccccgggcggtcgcccgggctcgatccataatttttgcacattaaactcaaccaaaaagtccattaacacatttac-aa |
36382430 |
T |
 |
Q |
160 |
nnnnnnnnnttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
|||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
36382429 |
aagaaaaatttggacaatctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc |
36382346 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 56 - 240
Target Start/End: Complemental strand, 29319892 - 29319708
Alignment:
Q |
56 |
catgggcggttctagcgtatggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacattta |
155 |
Q |
|
|
|||||||||||||| ||||||| |||||| |||||||| || | ||||||| ||||||||||||||||| ||| |||||||| | |||||||||||||| |
|
|
T |
29319892 |
catgggcggttctaccgtatggtgacccctggcggtcgtccaggctcgatcgataatttttgcacattagactcaacccaaaatcccattaacacattta |
29319793 |
T |
 |
Q |
156 |
cnnnnnnnnnnnnttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcat |
240 |
Q |
|
|
| ||| ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| |
|
|
T |
29319792 |
caaaaagaaaaatttgagcaatctgaaaattgtcacacacaaataagtcttggaattttatttagcacactattgacgggttcat |
29319708 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 56 - 243
Target Start/End: Original strand, 20129290 - 20129477
Alignment:
Q |
56 |
catgggcggttctagcgtatggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacattta |
155 |
Q |
|
|
|||||||||||| | ||| | |||||||||||||||||||||| ||||||| ||||||||||||||||| ||| |||||||||| |||||||||||||| |
|
|
T |
20129290 |
catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta |
20129389 |
T |
 |
Q |
156 |
cnnnnnnnnnnnnttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
| |||||||||||||||||||||||||| ||||| |||| ||||||||||| ||||||||||||| | |||||||| |
|
|
T |
20129390 |
caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttagaattttatttggcacactattgacagtttcatctc |
20129477 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 76 - 243
Target Start/End: Complemental strand, 30216909 - 30216742
Alignment:
Q |
76 |
ggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnnnnnnnnnnnnttgggca |
175 |
Q |
|
|
||||||||||||||||||||||| ||||||| ||||||||||||||||| || ||||||||||| ||||||||| |||| ||||||| |
|
|
T |
30216909 |
ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacccaaaagctaattaacacacttacaaaaagaaaaatttgggca |
30216810 |
T |
 |
Q |
176 |
atctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
||||||||||| ||||| ||||||| |||| ||||||||||||||||||||||||||||||||||||| |
|
|
T |
30216809 |
atctgaaaattctcacatgcaaatagatctcggaattttatttagcacactattgacgggttcatctc |
30216742 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 59 - 240
Target Start/End: Original strand, 40528996 - 40529179
Alignment:
Q |
59 |
gggcggttctagcgtatggcgaccccgggcg--gtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttac |
156 |
Q |
|
|
||||||||||| ||||||||||||| ||||| |||| |||| ||||||| ||||||||||||||||||||| ||| |||| ||||||||||||||||| |
|
|
T |
40528996 |
gggcggttctaccgtatggcgaccctgggcgaggtcgtccggactcgatcgataatttttgcacattaaactcaacctaaaaactcattaacacatttac |
40529095 |
T |
 |
Q |
157 |
nnnnnnnnnnnnttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcat |
240 |
Q |
|
|
|||| |||| |||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
T |
40529096 |
aaaaagaaaaatttggacaatttgaaaattgtcacatgcaaataggtcttggaattttatttagcacactattgacgggttcat |
40529179 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 56 - 243
Target Start/End: Original strand, 47500753 - 47500940
Alignment:
Q |
56 |
catgggcggttctagcgtatggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacattta |
155 |
Q |
|
|
|||||||||||| | ||| | |||||||||||||||||||||| ||||||| ||||||||||||||||| ||| ||| ||||||||||||||||||||| |
|
|
T |
47500753 |
catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacattta |
47500852 |
T |
 |
Q |
156 |
cnnnnnnnnnnnnttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
||||||||| |||||||||||||||| ||||| |||||||||||||||| ||||||||||||| | |||||||| |
|
|
T |
47500853 |
tgaaaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc |
47500940 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 53 - 243
Target Start/End: Original strand, 13012165 - 13012355
Alignment:
Q |
53 |
aaccatgggcggttctagcgtatggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacat |
152 |
Q |
|
|
||||||||||||||| | ||| | |||||||||||||||||||||| ||||||| ||||||||||||||||| | | ||| |||||||||||||||||| |
|
|
T |
13012165 |
aaccatgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagattcaaccaaaaagctcattaacacat |
13012264 |
T |
 |
Q |
153 |
ttacnnnnnnnnnnnnttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
||| ||||||||| |||||||||||||||| ||||| |||||||||||||||| ||||||||||||| | |||||||| |
|
|
T |
13012265 |
ttataaaaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc |
13012355 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 53 - 243
Target Start/End: Complemental strand, 43143774 - 43143584
Alignment:
Q |
53 |
aaccatgggcggttctagcgtatggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacat |
152 |
Q |
|
|
|||||||||||||| | ||| | ||||||||||||||||||||| ||||||| ||||||||||||||||| ||| |||||||||| ||||||||| |
|
|
T |
43143774 |
aaccatgggcggtttcaccgtccgacgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacac |
43143675 |
T |
 |
Q |
153 |
ttacnnnnnnnnnnnnttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
|||| |||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||| ||||| ||||||||||| |
|
|
T |
43143674 |
ttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc |
43143584 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 56 - 243
Target Start/End: Complemental strand, 26439466 - 26439279
Alignment:
Q |
56 |
catgggcggttctagcgtatggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacattta |
155 |
Q |
|
|
|||||||||||| | ||| | |||||||||||||||||||||| |||| || ||||||||||||||||| ||| |||||||||| |||||||||||||| |
|
|
T |
26439466 |
catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacattta |
26439367 |
T |
 |
Q |
156 |
cnnnnnnnnnnnnttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
|||||||||||||||||||||||||| ||||| ||||| |||||||||| |||||||||||| | |||||||| |
|
|
T |
26439366 |
taaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgacagtttcatctc |
26439279 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 56 - 243
Target Start/End: Complemental strand, 34407471 - 34407284
Alignment:
Q |
56 |
catgggcggttctagcgtatggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacattta |
155 |
Q |
|
|
|||||||||||| | ||| | |||||||||||||||||||||| |||| || ||||||||||||||||| ||| |||||||||| |||||||||||||| |
|
|
T |
34407471 |
catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacattta |
34407372 |
T |
 |
Q |
156 |
cnnnnnnnnnnnnttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
|||||||||||||||||||||||||| ||||| ||||| |||||||||| |||||||||||| | |||||||| |
|
|
T |
34407371 |
taaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgacagtttcatctc |
34407284 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 59 - 243
Target Start/End: Complemental strand, 17511417 - 17511233
Alignment:
Q |
59 |
gggcggttctagcgtatggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnn |
158 |
Q |
|
|
||||||||||| ||||||||||||| || ||||||||| | ||||||| ||||||||||||||||| ||| |||||||||| ||||||||||||||| |
|
|
T |
17511417 |
gggcggttctaccgtatggcgaccctgg-cggtcgcccagactcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaa |
17511319 |
T |
 |
Q |
159 |
nnnnnnnnnnttgggcaatctgaaaattgtcacacgcaaatatatcttgg-aattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
||||||||| |||||||||| ||||||||||| |||||| |||||||||||||||| |||||| |||||||||| |
|
|
T |
17511318 |
aaagaaaaatttgggcaatttgaaaattgttacacgcaaataggtcttggaaattttatttagcacattattgatcggttcatctc |
17511233 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 79 - 243
Target Start/End: Complemental strand, 3293060 - 3292896
Alignment:
Q |
79 |
gaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnnnnnnnnnnnnttgggcaatc |
178 |
Q |
|
|
|||||||||||||||||||| ||||||| ||||||||||| ||||| || |||||||||| ||||||||| |||| |||||||||| |
|
|
T |
3293060 |
gaccccgggcggtcgcccgggctcgatcgataatttttgcccattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatc |
3292961 |
T |
 |
Q |
179 |
tgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
|||||||| ||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||| |
|
|
T |
3292960 |
tgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc |
3292896 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 76 - 241
Target Start/End: Complemental strand, 50205244 - 50205079
Alignment:
Q |
76 |
ggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnnnnnnnnnnnnttgggca |
175 |
Q |
|
|
||||| |||||||||||||||| ||||||| ||||||||||||||||| | |||||||||| ||||||||| |||| |||| || |
|
|
T |
50205244 |
ggcgatcccgggcggtcgcccgagctcgatcgataatttttgcacattagatccaacccaaaagccaattaacacacttacaaaaagaaaaaattggaca |
50205145 |
T |
 |
Q |
176 |
atctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatc |
241 |
Q |
|
|
||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
T |
50205144 |
atctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatc |
50205079 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 76 - 243
Target Start/End: Complemental strand, 6690402 - 6690235
Alignment:
Q |
76 |
ggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnnnnnnnnnnnnttgggca |
175 |
Q |
|
|
||||||||||||||||||||||| ||||||| ||||||||||| ||||| || |||||||||| ||||||||| |||| ||||||| |
|
|
T |
6690402 |
ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggca |
6690303 |
T |
 |
Q |
176 |
atctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
| ||||||||| ||||||||||||| ||| | |||||||||||||||||||||||||||||| |||| |
|
|
T |
6690302 |
aactgaaaattctcacacgcaaataggtctcgaaattttatttagcacactattgacgggttcgtctc |
6690235 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 56 - 243
Target Start/End: Original strand, 43355884 - 43356071
Alignment:
Q |
56 |
catgggcggttctagcgtatggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacattta |
155 |
Q |
|
|
|||||||||||| | ||| | |||||||| ||| ||||||||| |||| || ||||||||||||||||| ||| |||||||||| |||||||||||||| |
|
|
T |
43355884 |
catgggcggttccaccgtgtagcgaccccaggcagtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacattta |
43355983 |
T |
 |
Q |
156 |
cnnnnnnnnnnnnttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
|||||||||||||||||||||||||| ||||| ||||| |||||||||| |||||||||||| | |||||||| |
|
|
T |
43355984 |
taaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgacagtttcatctc |
43356071 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 169 - 243
Target Start/End: Original strand, 6235613 - 6235687
Alignment:
Q |
169 |
ttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
6235613 |
ttgggcaatttgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc |
6235687 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 78 - 243
Target Start/End: Original strand, 48989330 - 48989495
Alignment:
Q |
78 |
cgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnnnnnnnnnnnnttgggcaat |
177 |
Q |
|
|
|||| |||||||||| |||| |||||| |||||||||||||||||||| || |||||| |||||||||| |||| ||||||||| |
|
|
T |
48989330 |
cgactccgggcggtcaaccgggttcgatcgataatttttgcacattaaacccaactcaaaagtccattaacacacttacaaaaagaaaaatttgggcaat |
48989429 |
T |
 |
Q |
178 |
ctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
||||||||| ||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||| |
|
|
T |
48989430 |
ctgaaaattctcatacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc |
48989495 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 77 - 231
Target Start/End: Complemental strand, 42333942 - 42333788
Alignment:
Q |
77 |
gcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnnnnnnnnnnnnttgggcaa |
176 |
Q |
|
|
|||| |||||||||||| |||| ||| ||| ||||||||||||||||| ||| |||||||||| ||||||||| |||| |||||||| |
|
|
T |
42333942 |
gcgatcccgggcggtcgtccgggctcaatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaa |
42333843 |
T |
 |
Q |
177 |
tctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattga |
231 |
Q |
|
|
|||||||||| ||||||||||||| ||| ||||||||||||||||||| ||||| |
|
|
T |
42333842 |
tctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga |
42333788 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 76 - 243
Target Start/End: Complemental strand, 10353051 - 10352884
Alignment:
Q |
76 |
ggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnnnnnnnnnnnnttgggca |
175 |
Q |
|
|
||||||||| ||||||||||||| ||| ||| ||||||||||||||||| || ||| ||||| ||||||||||||||| ||||||| |
|
|
T |
10353051 |
ggcgacccctggcggtcgcccgggctcaatcgataatttttgcacattagacccaaccaaaaagtccattaacacatttacaaaaggaaaaatttgggca |
10352952 |
T |
 |
Q |
176 |
atctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
||||||||||| | ||||||||||| ||| ||||||||||||||||||| | || ||| |||||||| |
|
|
T |
10352951 |
atctgaaaattcttacacgcaaataggtctcggaattttatttagcacaccagtgtcggattcatctc |
10352884 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 169 - 243
Target Start/End: Original strand, 44156744 - 44156818
Alignment:
Q |
169 |
ttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
|||| ||||||||||||| || |||||||||| ||| ||||||||||||||||||||||||||||||||||||| |
|
|
T |
44156744 |
ttggacaatctgaaaattctctcacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc |
44156818 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 82 - 243
Target Start/End: Complemental strand, 29996144 - 29995983
Alignment:
Q |
82 |
cccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnnnnnnnnnnnnttgggcaatctga |
181 |
Q |
|
|
||||| |||||| |||| ||||||| |||||||||| |||||| ||| ||| ||||| ||||||||||||||| ||||||||||||| |
|
|
T |
29996144 |
cccggacggtcgtccggactcgatcgataatttttgtacattagactcaaccaaaaagtccattaacacatttacgaaaagaaaaatttgggcaatctga |
29996045 |
T |
 |
Q |
182 |
aaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
||||| | |||||||||| ||| ||||||||||| |||||||||||||||| |||||||| |
|
|
T |
29996044 |
aaattcttgcacgcaaatagttctcggaattttattaagcacactattgacggattcatctc |
29995983 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 169 - 243
Target Start/End: Complemental strand, 28877324 - 28877250
Alignment:
Q |
169 |
ttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
||||| ||||| |||||| ||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||| |
|
|
T |
28877324 |
ttgggaaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgatgggttcatctc |
28877250 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 169 - 243
Target Start/End: Original strand, 35546046 - 35546120
Alignment:
Q |
169 |
ttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
|||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||| ||||||||||| |
|
|
T |
35546046 |
ttgggcaatctgaaaattctcacacgcaaatgggtctctgaattttatttagcacactattgatgggttcatctc |
35546120 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 243
Target Start/End: Complemental strand, 30077797 - 30077631
Alignment:
Q |
77 |
gcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnnnnnnnnnnnnttgggcaa |
176 |
Q |
|
|
|||||| ||||||||||||| | ||| ||| |||| |||||||||||| || ||| ||||| |||||||||||||||| |||| ||| |
|
|
T |
30077797 |
gcgacctcgggcggtcgcccaggctcaatcgataaattttgcacattagacccaaccaaaaagttcattaacacatttacaaaaagaaaaatttggacaa |
30077698 |
T |
 |
Q |
177 |
tctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
|||||||||| | |||| |||||| ||||| ||||||||||||||||||| || ||| |||||||| |
|
|
T |
30077697 |
tctgaaaatttttacacacaaataggtcttgaaattttatttagcacactagtgccggattcatctc |
30077631 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 156
Target Start/End: Original strand, 45194178 - 45194256
Alignment:
Q |
78 |
cgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttac |
156 |
Q |
|
|
||||||| |||| | |||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||| |||| |
|
|
T |
45194178 |
cgaccccaggcgattgcccggactcgatcaataatttttgcacattaaactcaacccaaaagtccattaacacacttac |
45194256 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 243
Target Start/End: Original strand, 1817810 - 1817884
Alignment:
Q |
169 |
ttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
||||||||||| |||||| | ||||||||||| ||| ||||||||||||| |||||||||| ||| |||||||| |
|
|
T |
1817810 |
ttgggcaatctaaaaattcttacacgcaaataggtctcggaattttatttaacacactattgtcggattcatctc |
1817884 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 231
Target Start/End: Complemental strand, 13392955 - 13392893
Alignment:
Q |
169 |
ttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattga |
231 |
Q |
|
|
||||||||||| |||||| ||||||||||||| ||| | ||||||||||||||||||||||| |
|
|
T |
13392955 |
ttgggcaatctaaaaattctcacacgcaaataggtctcgaaattttatttagcacactattga |
13392893 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 231
Target Start/End: Complemental strand, 13396094 - 13396032
Alignment:
Q |
169 |
ttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattga |
231 |
Q |
|
|
||||||||||| |||||| ||||||||||||| ||| | ||||||||||||||||||||||| |
|
|
T |
13396094 |
ttgggcaatctaaaaattctcacacgcaaataggtctcgaaattttatttagcacactattga |
13396032 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 76 - 243
Target Start/End: Original strand, 26448053 - 26448219
Alignment:
Q |
76 |
ggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnnnnnnnnnnnnttgggca |
175 |
Q |
|
|
|||||| ||| ||| ||| |||| ||||||| ||||||||||||||||||| | ||||||||| |||||||||| |||| ||||||| |
|
|
T |
26448053 |
ggcgactccgtgcgatcgtccggactcgatcgataatttttgcacattaaatctaacccaaaagtccattaacacacttacaaaaaaaaaat-ttgggca |
26448151 |
T |
 |
Q |
176 |
atctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
||||||||||| ||| || |||||| | | |||||||||||||||||||||||| ||| || ||||| |
|
|
T |
26448152 |
atctgaaaattctcatacacaaataggtttcggaattttatttagcacactattggcggatttatctc |
26448219 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 51 - 156
Target Start/End: Original strand, 27363336 - 27363441
Alignment:
Q |
51 |
ataaccatgggcggttctagcgtatggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacac |
150 |
Q |
|
|
||||||| |||||||| || |||||||||||| ||||||||||||||| ||||||| | |||||||| |||| | |||||||||| ||||||||| |
|
|
T |
27363336 |
ataaccaggggcggttttaccgtatggcgacctcgggcggtcgcccgggctcgatcgaatttttttgcatattaggcccaacccaaaagcccattaacac |
27363435 |
T |
 |
Q |
151 |
atttac |
156 |
Q |
|
|
| |||| |
|
|
T |
27363436 |
acttac |
27363441 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 124
Target Start/End: Original strand, 30109958 - 30110004
Alignment:
Q |
78 |
cgaccccgggcggtcgcccggtctcgatcaataatttttgcacatta |
124 |
Q |
|
|
||||||||| ||||||||||| ||||||| ||||||||||||||||| |
|
|
T |
30109958 |
cgaccccggacggtcgcccggactcgatcgataatttttgcacatta |
30110004 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 209 - 243
Target Start/End: Original strand, 30110108 - 30110142
Alignment:
Q |
209 |
aattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
||||||||||||||||||||||||||||||||||| |
|
|
T |
30110108 |
aattttatttagcacactattgacgggttcatctc |
30110142 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 209 - 243
Target Start/End: Original strand, 48130111 - 48130145
Alignment:
Q |
209 |
aattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
||||||||||||||||||||||||||||||||||| |
|
|
T |
48130111 |
aattttatttagcacactattgacgggttcatctc |
48130145 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 156
Target Start/End: Original strand, 48129978 - 48130046
Alignment:
Q |
88 |
cggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttac |
156 |
Q |
|
|
|||||| |||| ||||||| |||||||||||| |||| || ||||||||||||||||||||| |||| |
|
|
T |
48129978 |
cggtcgaccgggctcgatcgataatttttgcatattagacccaacccaaaagctcattaacacacttac |
48130046 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 117
Target Start/End: Original strand, 7769306 - 7769369
Alignment:
Q |
54 |
accatgggcggttctagcgtatggcgaccccgggcggtcgcccggtctcgatcaataatttttg |
117 |
Q |
|
|
||||||||||||| | ||| ||||||||| ||||||||||||| ||||||| |||||||||| |
|
|
T |
7769306 |
accatgggcggtttcaccgtccggcgaccccaggcggtcgcccgggctcgatcgataatttttg |
7769369 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 113
Target Start/End: Complemental strand, 49908819 - 49908782
Alignment:
Q |
76 |
ggcgaccccgggcggtcgcccggtctcgatcaataatt |
113 |
Q |
|
|
||||||||||||||||||||||| ||||||| |||||| |
|
|
T |
49908819 |
ggcgaccccgggcggtcgcccgggctcgatcgataatt |
49908782 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 105; Significance: 1e-52; HSPs: 18)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 56 - 240
Target Start/End: Original strand, 5555467 - 5555651
Alignment:
Q |
56 |
catgggcggttctagcgtatggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacattta |
155 |
Q |
|
|
|||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||| |||||||||| ||||||| |||||| |
|
|
T |
5555467 |
catgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacgcattta |
5555566 |
T |
 |
Q |
156 |
cnnnnnnnnnnnnttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcat |
240 |
Q |
|
|
| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| |
|
|
T |
5555567 |
caaaaagaaaaatttgggcaatctgaaaattgtcacacacaaataggtcttggaattttatttagcacactattgacgggttcat |
5555651 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 55 - 240
Target Start/End: Complemental strand, 3114284 - 3114099
Alignment:
Q |
55 |
ccatgggcggttctagcgtatggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacattt |
154 |
Q |
|
|
||||||||||||||| ||||||| |||||||| ||||||||||| ||||||| ||||||||||||||||| ||| |||||||||| ||||||||||||| |
|
|
T |
3114284 |
ccatgggcggttctaccgtatggtgaccccggacggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattt |
3114185 |
T |
 |
Q |
155 |
acnnnnnnnnnnnnttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcat |
240 |
Q |
|
|
|| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| |
|
|
T |
3114184 |
acaaaaagaaaaatttgggcaatctgaaaattgtcacacacaaataggtcttggaattttatttagcacactattgacgggttcat |
3114099 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 60 - 243
Target Start/End: Original strand, 8394109 - 8394292
Alignment:
Q |
60 |
ggcggttctagcgtatggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnnn |
159 |
Q |
|
|
|||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||| ||||| ||||||||||||||| |
|
|
T |
8394109 |
ggcggttctaccgtatggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaa |
8394208 |
T |
 |
Q |
160 |
nnnnnnnnnttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
|||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||| |
|
|
T |
8394209 |
aggaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacgggtttatctc |
8394292 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 60 - 243
Target Start/End: Original strand, 36630800 - 36630983
Alignment:
Q |
60 |
ggcggttctagcgtatggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnnn |
159 |
Q |
|
|
|||||||||| |||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||| ||| ||||| ||||||||||||||| |
|
|
T |
36630800 |
ggcggttctaccgtatggcgaccccggacggtcgcccgggctcgatcgataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaa |
36630899 |
T |
 |
Q |
160 |
nnnnnnnnnttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
|||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |
|
|
T |
36630900 |
aagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttggaattttagttagcacactattgacgggttcatctc |
36630983 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 56 - 241
Target Start/End: Complemental strand, 14777294 - 14777109
Alignment:
Q |
56 |
catgggcggttctagcgtatggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacattta |
155 |
Q |
|
|
|||||||||||||| ||| | |||| ||||||||||||||||| ||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||| |
|
|
T |
14777294 |
catgggcggttctaccgtgtagcgatcccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagctcattaacacattta |
14777195 |
T |
 |
Q |
156 |
cnnnnnnnnnnnnttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatc |
241 |
Q |
|
|
| |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| | |||||| |
|
|
T |
14777194 |
caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatc |
14777109 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 76 - 243
Target Start/End: Complemental strand, 34389223 - 34389056
Alignment:
Q |
76 |
ggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnnnnnnnnnnnnttgggca |
175 |
Q |
|
|
||||||||||||||||||||||| ||||||| ||||||||||||||||| || ||||||||||| ||||||||| |||| ||||||| |
|
|
T |
34389223 |
ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacccaaaagctaattaacacacttacaaaaagaaaaatttgggca |
34389124 |
T |
 |
Q |
176 |
atctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
||||||||||| ||||||||||||| ||| |||||||||||||||||| ||| |||||||||||||| |
|
|
T |
34389123 |
atctgaaaattctcacacgcaaataggtctcggaattttatttagcacattatcgacgggttcatctc |
34389056 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 76 - 243
Target Start/End: Complemental strand, 37002311 - 37002144
Alignment:
Q |
76 |
ggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnnnnnnnnnnnnttgggca |
175 |
Q |
|
|
|||||||||||||||||| ||||||||||| ||||||||||||||||| || | ||||||| ||||||||| |||| ||||||| |
|
|
T |
37002311 |
ggcgaccccgggcggtcgttcggtctcgatcgataatttttgcacattagacccaatccaaaagtcaattaacacacttacaaaaagaaaaatttgggca |
37002212 |
T |
 |
Q |
176 |
atctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
37002211 |
atctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc |
37002144 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 85 - 243
Target Start/End: Original strand, 35090177 - 35090335
Alignment:
Q |
85 |
gggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnnnnnnnnnnnnttgggcaatctgaaaa |
184 |
Q |
|
|
|||||||||||||| ||||||||||||||||||||||||| || |||||||||| ||||||||| |||| ||||| |||||||||| |
|
|
T |
35090177 |
gggcggtcgcccgggctcgatcaataatttttgcacattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggtaatctgaaaa |
35090276 |
T |
 |
Q |
185 |
ttgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
|| ||||||||||||| ||| |||||||||||||||||||||||||||| |||||||| |
|
|
T |
35090277 |
ttctcacacgcaaataggtctcggaattttatttagcacactattgacggattcatctc |
35090335 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 76 - 243
Target Start/End: Original strand, 33685564 - 33685731
Alignment:
Q |
76 |
ggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnnnnnnnnnnnnttgggca |
175 |
Q |
|
|
||||||||| ||| ||||| ||| ||||||| |||||||||||||||||||| |||||||||| |||||||||| |||| ||||||| |
|
|
T |
33685564 |
ggcgaccccaggcagtcgctcgggctcgatcgataatttttgcacattaaacccaacccaaaagcccattaacacacttacaaaaagaaaaatttgggca |
33685663 |
T |
 |
Q |
176 |
atctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
||||||||||| ||| |||||||||| ||| ||||||||||||||||||||||||||||| ||||| |
|
|
T |
33685664 |
atctgaaaattctcatacgcaaatatgtctcataattttatttagcacactattgacgggtttatctc |
33685731 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 76 - 241
Target Start/End: Complemental strand, 8867898 - 8867733
Alignment:
Q |
76 |
ggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnnnnnnnnnnnnttgggca |
175 |
Q |
|
|
||||||||||||||||||||||| ||||||| |||||||||||| |||| || | |||||||| ||||| |||||||| ||||||| |
|
|
T |
8867898 |
ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcatattagacccaatccaaaagccaattaatacatttacaaaaagaaaaatttgggca |
8867799 |
T |
 |
Q |
176 |
atctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatc |
241 |
Q |
|
|
||| ||||||| ||||||||||||| ||| |||||||||||||||||||||||||||| |||||| |
|
|
T |
8867798 |
atcggaaaattttcacacgcaaataggtctcggaattttatttagcacactattgacggattcatc |
8867733 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 95 - 243
Target Start/End: Complemental strand, 40920151 - 40920003
Alignment:
Q |
95 |
ccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnnnnnnnnnnnnttgggcaatctgaaaattgtcacacg |
194 |
Q |
|
|
|||| ||||||| ||||||||||||||||| | || |||||||||| |||||||||||||| |||| ||||||||||||| ||||| | |
|
|
T |
40920151 |
ccgggctcgatcgataatttttgcacattagatttaacccaaaagccaattaacacatttacaaaaagaaaaatttggacaatctgaaaattctcacatg |
40920052 |
T |
 |
Q |
195 |
caaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
|||||| ||| ||||||||||||||||||||||||||||||||||||| |
|
|
T |
40920051 |
caaataggtctcggaattttatttagcacactattgacgggttcatctc |
40920003 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 169 - 243
Target Start/End: Original strand, 26624839 - 26624913
Alignment:
Q |
169 |
ttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
|||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |
|
|
T |
26624839 |
ttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc |
26624913 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 169 - 243
Target Start/End: Original strand, 36658274 - 36658348
Alignment:
Q |
169 |
ttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
|||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |
|
|
T |
36658274 |
ttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc |
36658348 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 169 - 242
Target Start/End: Complemental strand, 38638310 - 38638237
Alignment:
Q |
169 |
ttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatct |
242 |
Q |
|
|
|||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |
|
|
T |
38638310 |
ttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatct |
38638237 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 83 - 243
Target Start/End: Complemental strand, 43184628 - 43184468
Alignment:
Q |
83 |
ccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnnnnnnnnnnnnttgggcaatctgaa |
182 |
Q |
|
|
|||||||||||| ||| ||||||| ||||||||| | ||| | |||| |||||||||| ||||||| | |||| |||||||||||||| |
|
|
T |
43184628 |
ccgggcggtcgctcgggctcgatcgataatttttacgcatcagacttaacccaaaagccaattaacatacttacaaaaagaaaaatttgggcaatctgaa |
43184529 |
T |
 |
Q |
183 |
aattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
|||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |
|
|
T |
43184528 |
aattctcacacgcaaataggtctctgaattttatttagcacactattgacgggttcatctc |
43184468 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 169 - 243
Target Start/End: Original strand, 7002818 - 7002892
Alignment:
Q |
169 |
ttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
|||| |||||| |||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||||| |
|
|
T |
7002818 |
ttggacaatctaaaaattctcacacgcaaataggtcacggaattttatttagcacactattgacgggttcatctc |
7002892 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 169 - 243
Target Start/End: Original strand, 7048689 - 7048763
Alignment:
Q |
169 |
ttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
|||| |||||| |||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||||| |
|
|
T |
7048689 |
ttggacaatctaaaaattctcacacgcaaataggtcacggaattttatttagcacactattgacgggttcatctc |
7048763 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 243
Target Start/End: Complemental strand, 10868490 - 10868456
Alignment:
Q |
209 |
aattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
|||||||||||||||||| |||||||||||||||| |
|
|
T |
10868490 |
aattttatttagcacacttttgacgggttcatctc |
10868456 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 102; Significance: 9e-51; HSPs: 20)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 59 - 240
Target Start/End: Original strand, 10033910 - 10034091
Alignment:
Q |
59 |
gggcggttctagcgtatggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnn |
158 |
Q |
|
|
||||||||||| |||||||||||||||| || |||||||| ||||||| ||||||||||||||||| ||| |||||||||| ||||||||||||||| |
|
|
T |
10033910 |
gggcggttctaccgtatggcgaccccggacgatcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaa |
10034009 |
T |
 |
Q |
159 |
nnnnnnnnnnttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcat |
240 |
Q |
|
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
T |
10034010 |
aaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcat |
10034091 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 59 - 243
Target Start/End: Original strand, 13817960 - 13818144
Alignment:
Q |
59 |
gggcggttctagcgtatggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnn |
158 |
Q |
|
|
||||||||||| |||||||||||||||||||||||| ||| ||||||| ||||||||||||||||| ||| |||||||||| ||||||||||||||| |
|
|
T |
13817960 |
gggcggttctaccgtatggcgaccccgggcggtcgctcgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaa |
13818059 |
T |
 |
Q |
159 |
nnnnnnnnnnttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
|||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||||| |
|
|
T |
13818060 |
aaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttggaaatttatttagcacactattgacgggctcatctc |
13818144 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 55 - 240
Target Start/End: Complemental strand, 39657694 - 39657509
Alignment:
Q |
55 |
ccatgggcggttctagcgtatggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacattt |
154 |
Q |
|
|
||||||||||||||| |||||||||||| | |||||| ||| |||||| ||||||||||||||||| ||| |||||||||||||||||||||||| |
|
|
T |
39657694 |
ccatgggcggttctactatatggcgaccccagacggtcgttcgggctcgattgataatttttgcacattagactcaacccaaaagctcattaacacattt |
39657595 |
T |
 |
Q |
155 |
acnnnnnnnnnnnnttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcat |
240 |
Q |
|
|
|| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
T |
39657594 |
acaaaaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcat |
39657509 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 55 - 243
Target Start/End: Complemental strand, 36293809 - 36293621
Alignment:
Q |
55 |
ccatgggcggttctagcgtatggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacattt |
154 |
Q |
|
|
||||||||||||||| ||| ||||||||||| ||||||| |||| ||||||| |||||||||| |||||| ||| |||||||||| ||||||||||||| |
|
|
T |
36293809 |
ccatgggcggttctaccgtgtggcgaccccgagcggtcgtccggactcgatcgataatttttgtacattagactcaacccaaaagcccattaacacattt |
36293710 |
T |
 |
Q |
155 |
acnnnnnnnnnnnnttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
|| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| || | |||||||| |
|
|
T |
36293709 |
acaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactatttacagtttcatctc |
36293621 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 56 - 243
Target Start/End: Original strand, 39434676 - 39434863
Alignment:
Q |
56 |
catgggcggttctagcgtatggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacattta |
155 |
Q |
|
|
|||||||||||||| ||| ||||||||| |||||||||||||| ||||||| ||||||||| ||||||| ||| |||||||||| |||||||||||||| |
|
|
T |
39434676 |
catgggcggttctaccgtgtggcgaccctgggcggtcgcccgggctcgatcgataattttttcacattagactcaacccaaaagcccattaacacattta |
39434775 |
T |
 |
Q |
156 |
cnnnnnnnnnnnnttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
| |||||||||||||||||||||||| | ||||| |||| ||||||||||||||||||||||||| | |||||||| |
|
|
T |
39434776 |
caaaatgaaaaatttgggcaatctgaaaattgtcacatgtaaataggtctttgaattttatttagcacactattgacagtttcatctc |
39434863 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 60 - 242
Target Start/End: Complemental strand, 1776559 - 1776377
Alignment:
Q |
60 |
ggcggttctagcgtatggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnnn |
159 |
Q |
|
|
|||||||||| |||||| ||||||||||||||||||||| ||||||| |||||||||| |||||||| | ||| ||||| ||||||||||||||| |
|
|
T |
1776559 |
ggcggttctaccgtatgacgaccccgggcggtcgcccgggctcgatcgataatttttgtacattaaagtcaaccaaaaagtccattaacacatttacaaa |
1776460 |
T |
 |
Q |
160 |
nnnnnnnnnttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatct |
242 |
Q |
|
|
||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||| |
|
|
T |
1776459 |
aagaaaaatttgggcaatttgaaaattgtcacacgcaaataggtcttggaattttatttagcacactatcgacaggttcatct |
1776377 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 56 - 227
Target Start/End: Complemental strand, 3155818 - 3155647
Alignment:
Q |
56 |
catgggcggttctagcgtatggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacattta |
155 |
Q |
|
|
|||||||||||||| |||||||||| ||||||||||||| ||| |||||||||||||||||||||||| ||| ||| ||||| |||||||||||||| |
|
|
T |
3155818 |
catgggcggttctatcgtatggcgatcccgggcggtcgctcgggctcgatcaataatttttgcacattcgactcaacctaaaagtccattaacacattta |
3155719 |
T |
 |
Q |
156 |
cnnnnnnnnnnnnttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacacta |
227 |
Q |
|
|
|||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
T |
3155718 |
taaaaagaaaaatttggacaatctgaaaattgtcacacgcaaatagatcttggaattttatttagcacacta |
3155647 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 56 - 243
Target Start/End: Complemental strand, 26283505 - 26283318
Alignment:
Q |
56 |
catgggcggttctagcgtatggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacattta |
155 |
Q |
|
|
|||||||||||| | ||| | |||||| ||||||||||||||| ||||||| ||||||||||||||||| ||| ||| ||||| ||||||||||||||| |
|
|
T |
26283505 |
catgggcggttccaccgtgtagcgacctcgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagttcattaacacattta |
26283406 |
T |
 |
Q |
156 |
cnnnnnnnnnnnnttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
|||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||| | |||||||| |
|
|
T |
26283405 |
taaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc |
26283318 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 76 - 243
Target Start/End: Complemental strand, 12279027 - 12278860
Alignment:
Q |
76 |
ggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnnnnnnnnnnnnttgggca |
175 |
Q |
|
|
||||| ||||||||||||||||| ||||||| ||||||||||||||||| || ||||||| || ||||||||| |||| ||||||| |
|
|
T |
12279027 |
ggcgatcccgggcggtcgcccggactcgatcgataatttttgcacattagacccaacccaaaggccaattaacacacttacaaaaagaaaaatttgggca |
12278928 |
T |
 |
Q |
176 |
atctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||| |||||||||| |
|
|
T |
12278927 |
atctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacaggttcatctc |
12278860 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 76 - 243
Target Start/End: Complemental strand, 17332718 - 17332551
Alignment:
Q |
76 |
ggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnnnnnnnnnnnnttgggca |
175 |
Q |
|
|
|||||||||||||| |||||||| ||||||| |||||||||||| |||| || |||||||||| ||||||||| |||| ||||||| |
|
|
T |
17332718 |
ggcgaccccgggcgttcgcccgggctcgatcgataatttttgcatattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggca |
17332619 |
T |
 |
Q |
176 |
atctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||| |||||||| |
|
|
T |
17332618 |
atctgaaaattttcacacgcaaataggtctcggaattttatttagcacactattgacggattcatctc |
17332551 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 76 - 243
Target Start/End: Original strand, 31680367 - 31680534
Alignment:
Q |
76 |
ggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnnnnnnnnnnnnttgggca |
175 |
Q |
|
|
||||||||||||||||||||||| ||||||| ||||||||| | ||||| || |||||||||| ||||||||| |||| ||||||| |
|
|
T |
31680367 |
ggcgaccccgggcggtcgcccgggctcgatcgataatttttccgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggca |
31680466 |
T |
 |
Q |
176 |
atctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
||||||||||| ||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||| |
|
|
T |
31680467 |
atctgaaaattctcacatgcaaataggtctcggaattttatttagcacactattgacgggttcatctc |
31680534 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 94 - 243
Target Start/End: Original strand, 16155015 - 16155164
Alignment:
Q |
94 |
cccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnnnnnnnnnnnnttgggcaatctgaaaattgtcacac |
193 |
Q |
|
|
||||| ||||||| ||||||||||||||||| ||| |||||||||| |||||||||||||| || |||||||||||||||||||||| |
|
|
T |
16155015 |
cccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttataaaaagaaaaatttaggcaatctgaaaattgtcacac |
16155114 |
T |
 |
Q |
194 |
gcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
||||||| |||||||||||||||||||||||||||||| | |||||||| |
|
|
T |
16155115 |
gcaaataggtcttggaattttatttagcacactattgacagattcatctc |
16155164 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 108 - 240
Target Start/End: Complemental strand, 16334011 - 16333879
Alignment:
Q |
108 |
ataatttttgcacattaaacttgacccaaaagctcattaacacatttacnnnnnnnnnnnnttgggcaatctgaaaattgtcacacgcaaatatatcttg |
207 |
Q |
|
|
||||||||||||||||| | | |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||||| |
|
|
T |
16334011 |
ataatttttgcacattagattcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttg |
16333912 |
T |
 |
Q |
208 |
gaattttatttagcacactattgacgggttcat |
240 |
Q |
|
|
||||||||||||||||||||||||||| ||||| |
|
|
T |
16333911 |
gaattttatttagcacactattgacggattcat |
16333879 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 76 - 243
Target Start/End: Original strand, 37254641 - 37254808
Alignment:
Q |
76 |
ggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnnnnnnnnnnnnttgggca |
175 |
Q |
|
|
||||||||| ||||||||||| | ||||||| ||||||||||||||||| || ||||||||| ||||||||| |||| ||||||| |
|
|
T |
37254641 |
ggcgaccccaggcggtcgcccaggctcgatcgataatttttgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggca |
37254740 |
T |
 |
Q |
176 |
atctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
||||||||||| ||||||||||||| ||| |||||||||||||||||| |||||||||||||||||| |
|
|
T |
37254741 |
atctgaaaattctcacacgcaaataggtctcggaattttatttagcacattattgacgggttcatctc |
37254808 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 90 - 243
Target Start/End: Original strand, 33430335 - 33430488
Alignment:
Q |
90 |
gtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnnnnnnnnnnnnttgggcaatctgaaaattgtc |
189 |
Q |
|
|
||||||||| ||||||| ||||||||||| ||||| || |||||||||| ||||||||| |||| |||||||||||||||||| || |
|
|
T |
33430335 |
gtcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctc |
33430434 |
T |
 |
Q |
190 |
acacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |
|
|
T |
33430435 |
acacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc |
33430488 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 76 - 243
Target Start/End: Complemental strand, 31501883 - 31501716
Alignment:
Q |
76 |
ggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnnnnnnnnnnnnttgggca |
175 |
Q |
|
|
|||||||||||||| | |||||| ||||||| ||||||||||||||||| || |||||||||| ||||||||| |||| ||||||| |
|
|
T |
31501883 |
ggcgaccccgggcgattgcccgggctcgatcgataatttttgcacattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggca |
31501784 |
T |
 |
Q |
176 |
atctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
||||||||||| || |||||||||| ||| | ||||||||||||||||||||||| | ||||||||| |
|
|
T |
31501783 |
atctgaaaattctcgcacgcaaataggtctcgaaattttatttagcacactattgatgagttcatctc |
31501716 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 78 - 243
Target Start/End: Original strand, 36291373 - 36291538
Alignment:
Q |
78 |
cgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnnnnnnnnnnnnttgggcaat |
177 |
Q |
|
|
|||| ||||||||||| |||| |||||||||||||||||||||||| | | ||| ||||| |||||||||||||||| ||||||||| |
|
|
T |
36291373 |
cgactccgggcggtcgtccgggttcgatcaataatttttgcacattagatctaacctaaaagttcattaacacatttacaaaaagaaaaatttgggcaat |
36291472 |
T |
 |
Q |
178 |
ctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
|| |||||| | |||| |||||| ||| |||||||||||| ||||||||||||||||||||||| |
|
|
T |
36291473 |
ctcaaaattattacacacaaataggtctcagaattttatttaacacactattgacgggttcatctc |
36291538 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 71 - 243
Target Start/End: Original strand, 19985934 - 19986106
Alignment:
Q |
71 |
cgtatggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnnnnnnnnnnnntt |
170 |
Q |
|
|
|||||| ||||| |||||||||| ||| ||||||| ||||||||||||||||| | | ||||||||| ||||| ||||||||| || |
|
|
T |
19985934 |
cgtatgacgacctcgggcggtcgtccgagctcgatcgataatttttgcacattagattcaacccaaaagtccattagcacatttacaaaaagaaaaattt |
19986033 |
T |
 |
Q |
171 |
gggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
||| ||||| |||||| ||||||||||||| ||||| ||||||||||| |||||||||||| |||||||||| |
|
|
T |
19986034 |
gggtaatctaaaaattatcacacgcaaataggtcttgaaattttatttaacacactattgacaggttcatctc |
19986106 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 95 - 243
Target Start/End: Original strand, 43068896 - 43069044
Alignment:
Q |
95 |
ccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnnnnnnnnnnnnttgggcaatctgaaaattgtcacacg |
194 |
Q |
|
|
|||| ||||||||||||||||| ||||||| || ||||||||| ||||||||||||||| |||||||||||||||||| | ||| | |
|
|
T |
43068896 |
ccgggctcgatcaataattttttcacattagacccaacccaaaagtccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattcttacatg |
43068995 |
T |
 |
Q |
195 |
caaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
||||| ||| |||||||||||||||||||||||| ||| |||||||| |
|
|
T |
43068996 |
taaataagtctcggaattttatttagcacactattgccggattcatctc |
43069044 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 112
Target Start/End: Original strand, 14316641 - 14316694
Alignment:
Q |
59 |
gggcggttctagcgtatggcgaccccgggcggtcgcccggtctcgatcaataat |
112 |
Q |
|
|
||||||||||| |||||||||| | ||||||||||||| | ||||||| ||||| |
|
|
T |
14316641 |
gggcggttctaccgtatggcgatctcgggcggtcgcccaggctcgatcgataat |
14316694 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 101; Significance: 4e-50; HSPs: 9)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 56 - 240
Target Start/End: Complemental strand, 34948945 - 34948761
Alignment:
Q |
56 |
catgggcggttctagcgtatggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacattta |
155 |
Q |
|
|
|||||||||||||| |||||||||||||| ||||||||||| | ||||||| ||||||||||||||||| ||| |||||||||| |||||||||||||| |
|
|
T |
34948945 |
catgggcggttctaccgtatggcgaccccaggcggtcgcccaggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta |
34948846 |
T |
 |
Q |
156 |
cnnnnnnnnnnnnttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcat |
240 |
Q |
|
|
| ||||||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||| |
|
|
T |
34948845 |
caaaaagaaaaatttgggcaatctgaaaattgtcacacacaaatagatcttgaaattttatttagcacactattgacgggttcat |
34948761 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 56 - 240
Target Start/End: Original strand, 13837801 - 13837985
Alignment:
Q |
56 |
catgggcggttctagcgtatggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacattta |
155 |
Q |
|
|
|||||||||||||| ||||||||||||||||||| |||| ||| |||||| |||||||||| |||||| ||| |||||||||| ||| |||||||||| |
|
|
T |
13837801 |
catgggcggttctaccgtatggcgaccccgggcgatcgctcgggttcgatcgataatttttgtacattagactcaacccaaaagcacatcaacacattta |
13837900 |
T |
 |
Q |
156 |
cnnnnnnnnnnnnttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcat |
240 |
Q |
|
|
| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
T |
13837901 |
caaaaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcat |
13837985 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 56 - 243
Target Start/End: Original strand, 398597 - 398784
Alignment:
Q |
56 |
catgggcggttctagcgtatggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacattta |
155 |
Q |
|
|
|||||||||||| | ||| | |||||||||||||||||||||| ||||||| ||||||||||||||||| ||| ||| ||||||||||||||||||||| |
|
|
T |
398597 |
catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacattta |
398696 |
T |
 |
Q |
156 |
cnnnnnnnnnnnnttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
||||||||| |||||||||||||||| ||||| |||||||||||||||| ||||||||||||| | |||||||| |
|
|
T |
398697 |
taaaaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc |
398784 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 76 - 243
Target Start/End: Original strand, 18339106 - 18339273
Alignment:
Q |
76 |
ggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnnnnnnnnnnnnttgggca |
175 |
Q |
|
|
||||||||||||||||||||||| ||||||||||||||||||||||||| || | | |||||| ||||||||| |||| ||||||| |
|
|
T |
18339106 |
ggcgaccccgggcggtcgcccgggctcgatcaataatttttgcacattagacccaatctaaaagccaattaacacacttacaaaaagaaaattttgggca |
18339205 |
T |
 |
Q |
176 |
atctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
||||||||||| ||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||| |
|
|
T |
18339206 |
atctgaaaattctcacatgcaaataggtctcggaattttatttagcacactattgacgggttcatctc |
18339273 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 76 - 243
Target Start/End: Original strand, 28996730 - 28996897
Alignment:
Q |
76 |
ggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnnnnnnnnnnnnttgggca |
175 |
Q |
|
|
|||||||||||||||||||||| ||||||| ||||||||||| ||||| || ||| ||||| ||||||||| |||| ||||||| |
|
|
T |
28996730 |
ggcgaccccgggcggtcgcccgagctcgatcgataatttttgcgcattagacccaacctaaaagtcaattaacacacttacaaaaagaaaaatttgggca |
28996829 |
T |
 |
Q |
176 |
atctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |
|
|
T |
28996830 |
atctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc |
28996897 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 82 - 243
Target Start/End: Original strand, 29743289 - 29743450
Alignment:
Q |
82 |
cccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnnnnnnnnnnnnttgggcaatctga |
181 |
Q |
|
|
|||||||||| |||||| ||| ||| ||||||||||||||||| || ||| ||||| |||||||||||||||| ||||||||||||| |
|
|
T |
29743289 |
cccgggcggttgcccgggctcaatcgataatttttgcacattagacccaaccaaaaagttcattaacacatttacagaaagaaaaatttgggcaatctga |
29743388 |
T |
 |
Q |
182 |
aaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
||||| | ||||||||||| ||| ||||||||||||||||||||| || ||| |||||||| |
|
|
T |
29743389 |
aaattcttacacgcaaataggtctcggaattttatttagcacactagtgccggattcatctc |
29743450 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 156
Target Start/End: Complemental strand, 31028531 - 31028451
Alignment:
Q |
76 |
ggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttac |
156 |
Q |
|
|
|||||||||| ||||| |||||| ||||||| ||||||||||||||||| | ||| |||||||||||||||||||||| |
|
|
T |
31028531 |
ggcgaccccgagcggttgcccggactcgatcgataatttttgcacattagatccaacctaaaagctcattaacacatttac |
31028451 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 243
Target Start/End: Complemental strand, 33229410 - 33229336
Alignment:
Q |
169 |
ttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
|||||||||||||||||| | ||||| ||||| ||| || ||||||||||||||||||||| ||| |||||||| |
|
|
T |
33229410 |
ttgggcaatctgaaaattcttacacgtaaataagtctcgggattttatttagcacactattgccggattcatctc |
33229336 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 112
Target Start/End: Original strand, 13647017 - 13647053
Alignment:
Q |
76 |
ggcgaccccgggcggtcgcccggtctcgatcaataat |
112 |
Q |
|
|
||||||||||||||||||||||| ||||||| ||||| |
|
|
T |
13647017 |
ggcgaccccgggcggtcgcccgggctcgatcgataat |
13647053 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 97; Significance: 9e-48; HSPs: 13)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 59 - 243
Target Start/End: Complemental strand, 29728570 - 29728386
Alignment:
Q |
59 |
gggcggttctagcgtatggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnn |
158 |
Q |
|
|
||||||||||| |||||||||||||||| |||||||||| ||||||| |||| |||||||||||| ||| |||||||||||||||||||||||||| |
|
|
T |
29728570 |
gggcggttctaccgtatggcgaccccggacggtcgcccgtgctcgatcgataaattttgcacattagactcaacccaaaagctcattaacacatttacaa |
29728471 |
T |
 |
Q |
159 |
nnnnnnnnnnttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
|||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||| |
|
|
T |
29728470 |
aaagaaaaatttgggcaatctgaaaattgtgacacgcaaataggtcttcgaattttatttagcacactattgacgggttcatctc |
29728386 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 60 - 240
Target Start/End: Original strand, 15838270 - 15838449
Alignment:
Q |
60 |
ggcggttctagcgtatggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnnn |
159 |
Q |
|
|
|||||||||| |||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||| ||| ||||| ||||||||||||||| |
|
|
T |
15838270 |
ggcggttctaccgtatggcgaccccgggcggtcacccgggctcgattgataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaa |
15838369 |
T |
 |
Q |
160 |
nnnnnnnnnttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcat |
240 |
Q |
|
|
|||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
T |
15838370 |
agaaaaat-ttgggcaatctgaaaattttcacacgcaaataggtcttggaattttatttagcacactattgacgggttcat |
15838449 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 53 - 243
Target Start/End: Complemental strand, 3648984 - 3648794
Alignment:
Q |
53 |
aaccatgggcggttctagcgtatggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacat |
152 |
Q |
|
|
||||| ||||||||||| |||||||||| || || | ||||||||| ||||||| ||||||||| ||||||| ||| |||||||||| ||||||||||| |
|
|
T |
3648984 |
aaccaggggcggttctaccgtatggcgatccgggacagtcgcccgggctcgatcgataattttttcacattagactcaacccaaaagcccattaacacat |
3648885 |
T |
 |
Q |
153 |
ttacnnnnnnnnnnnnttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
|||| ||||||||||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||| |
|
|
T |
3648884 |
ttacaaaaagaaaattttgggcaatctgaaaattgtcacacgcaagtaggttttggaattttatttagcacactattgacgggttcatctc |
3648794 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 80 - 243
Target Start/End: Complemental strand, 16788188 - 16788025
Alignment:
Q |
80 |
accccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnnnnnnnnnnnnttgggcaatct |
179 |
Q |
|
|
||||||||||||||||||| ||||||| ||||||||||||||||| ||| |||||||||| ||||||||| |||| ||||||||||| |
|
|
T |
16788188 |
accccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatct |
16788089 |
T |
 |
Q |
180 |
gaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
|||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
16788088 |
taaaactctcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc |
16788025 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 56 - 243
Target Start/End: Original strand, 39914495 - 39914681
Alignment:
Q |
56 |
catgggcggttctagcgtatggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacattta |
155 |
Q |
|
|
||||| |||||| | ||| | |||||||||||||||||||||| ||||||| ||||||||||||||||| ||| ||| ||||||||||||||||||||| |
|
|
T |
39914495 |
catggacggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacattta |
39914594 |
T |
 |
Q |
156 |
cnnnnnnnnnnnnttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
||||||||| |||||||||||||| | ||||| |||||||||||||||| ||||||||||||| | |||||||| |
|
|
T |
39914595 |
-taaaaaaaaaatttgggcaatttgaaaattgtcacaagtaaataggtcttggaattttatttggcacactattgacagtttcatctc |
39914681 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 75 - 243
Target Start/End: Complemental strand, 34136993 - 34136825
Alignment:
Q |
75 |
tggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnnnnnnnnnnnnttgggc |
174 |
Q |
|
|
||||||||||| |||||||||||| ||||||| ||||||||||||||||| ||| ||||||||| ||||||||| |||| |||||| |
|
|
T |
34136993 |
tggcgaccccgagcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggc |
34136894 |
T |
 |
Q |
175 |
aatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
|||||||||||| ||||||||||||| ||| | ||||||||||||||||| ||||| ||||||||||| |
|
|
T |
34136893 |
aatctgaaaattctcacacgcaaataggtctcgaaattttatttagcacacaattgatgggttcatctc |
34136825 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 76 - 243
Target Start/End: Original strand, 4404008 - 4404175
Alignment:
Q |
76 |
ggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnnnnnnnnnnnnttgggca |
175 |
Q |
|
|
||||||||| ||||||||||||| ||||||| ||||||||||||||||| ||| |||||||||| ||||||| | |||| ||||||| |
|
|
T |
4404008 |
ggcgaccccaggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacatacttacaaaaagaaaaatttgggca |
4404107 |
T |
 |
Q |
176 |
atctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
|||| |||||| ||||||||||||| ||| ||||||||||||||||||| ||||| ||||||||||| |
|
|
T |
4404108 |
atctaaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc |
4404175 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 76 - 243
Target Start/End: Original strand, 23402108 - 23402275
Alignment:
Q |
76 |
ggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnnnnnnnnnnnnttgggca |
175 |
Q |
|
|
||||||||||||||||||||||| ||||||| ||||| |||||| |||| || |||||||||| ||||||||| |||| ||||||| |
|
|
T |
23402108 |
ggcgaccccgggcggtcgcccgggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggca |
23402207 |
T |
 |
Q |
176 |
atctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
||||||||||| ||||||||||||| ||| | ||||||||||| |||||||||||| |||||||||| |
|
|
T |
23402208 |
atctgaaaattctcacacgcaaataggtctcgaaattttatttaacacactattgactggttcatctc |
23402275 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 76 - 243
Target Start/End: Original strand, 36408551 - 36408718
Alignment:
Q |
76 |
ggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnnnnnnnnnnnnttgggca |
175 |
Q |
|
|
||||||| ||||||||||||||| ||||||| ||||||||||||||||| | ||||||||| ||||||||||||||| || |||| |
|
|
T |
36408551 |
ggcgacctcgggcggtcgcccgggctcgatcgataatttttgcacattagatccaacccaaaagtccattaacacatttacaaaaagaaaatttttggca |
36408650 |
T |
 |
Q |
176 |
atctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
|| |||||||| | |||||| |||| ||| |||||||||||| |||||||||| ||| |||||||| |
|
|
T |
36408651 |
atttgaaaattcttacacgctaataggtctcagaattttatttaacacactattgccggattcatctc |
36408718 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 243
Target Start/End: Original strand, 42231030 - 42231104
Alignment:
Q |
169 |
ttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
||||||||| |||||||| ||| | ||||||| ||| ||||||||||||||||||||||||||| |||||||| |
|
|
T |
42231030 |
ttgggcaatttgaaaattctcatatgcaaataggtctcagaattttatttagcacactattgacggattcatctc |
42231104 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 169 - 230
Target Start/End: Original strand, 9877313 - 9877374
Alignment:
Q |
169 |
ttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattg |
230 |
Q |
|
|
|||||||||||||||||| ||||| ||||||| ||| | |||||||||||||||||||||| |
|
|
T |
9877313 |
ttgggcaatctgaaaattctcacatgcaaataggtctcgaaattttatttagcacactattg |
9877374 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 151
Target Start/End: Complemental strand, 2729363 - 2729288
Alignment:
Q |
76 |
ggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacaca |
151 |
Q |
|
|
||||||||||||||| ||||||| ||||||| ||||||||| ||||||||| | |||||||| |||||||||| |
|
|
T |
2729363 |
ggcgaccccgggcggacgcccgggctcgatcgataatttttacacattaaatccaatccaaaagcccattaacaca |
2729288 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 209 - 243
Target Start/End: Complemental strand, 40470509 - 40470475
Alignment:
Q |
209 |
aattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
||||||||||||||||||||||||||||||||||| |
|
|
T |
40470509 |
aattttatttagcacactattgacgggttcatctc |
40470475 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 93; Significance: 2e-45; HSPs: 12)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 56 - 240
Target Start/End: Original strand, 7433425 - 7433609
Alignment:
Q |
56 |
catgggcggttctagcgtatggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacattta |
155 |
Q |
|
|
|||||||||||||| |||||||| |||||||||||||||||| ||||||| ||||||||||||||||| ||| |||||||||| |||||||||||||| |
|
|
T |
7433425 |
catgggcggttctaccgtatggcaaccccgggcggtcgcccgagctcgatctataatttttgcacattagactcaacccaaaagcccattaacacattta |
7433524 |
T |
 |
Q |
156 |
cnnnnnnnnnnnnttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcat |
240 |
Q |
|
|
| ||||||||||| ||||||||||||| |||||| ||||| |||||||||||||||||||||||||||||||| |
|
|
T |
7433525 |
caaaaagaaaattttgggcaatctaaaaattgtcacacacaaataggtcttgaaattttatttagcacactattgacgggttcat |
7433609 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 59 - 243
Target Start/End: Complemental strand, 42311125 - 42310941
Alignment:
Q |
59 |
gggcggttctagcgtatggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnn |
158 |
Q |
|
|
||||||||||| |||||||||||||| | || |||||||| ||||||| ||||||||||||||||| ||| |||||||||| | ||||||||||||| |
|
|
T |
42311125 |
gggcggttctaccgtatggcgaccccagacgatcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccgttaacacatttacaa |
42311026 |
T |
 |
Q |
159 |
nnnnnnnnnnttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
|||||||||||||||||||||||||||||||| ||||| |||||||||||| || ||||||||||||||||||| |
|
|
T |
42311025 |
aaagaaaaatttgggcaatctgaaaattgtcacacgcaaataagtcttgaaattttatttagtacgctattgacgggttcatctc |
42310941 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 56 - 243
Target Start/End: Original strand, 26144235 - 26144422
Alignment:
Q |
56 |
catgggcggttctagcgtatggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacattta |
155 |
Q |
|
|
|||||||||||| | ||| | |||||||||||||||||||||| ||||||| ||||||||||||||||| ||| ||| ||||||||||||||||||||| |
|
|
T |
26144235 |
catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacattta |
26144334 |
T |
 |
Q |
156 |
cnnnnnnnnnnnnttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
||||||||| |||||||||||||||| ||||| |||||||||||||||| ||||||||||||| | |||||||| |
|
|
T |
26144335 |
taaaaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc |
26144422 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 63 - 243
Target Start/End: Complemental strand, 32982236 - 32982056
Alignment:
Q |
63 |
ggttctagcgtatggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnnnnnn |
162 |
Q |
|
|
||||||| |||||||||||||||||||||||| ||| | ||||| ||||||||||||||||| || ||| |||||| |||||||| |||||| |
|
|
T |
32982236 |
ggttctaccgtatggcgaccccgggcggtcgcgcgggcccgatcgataatttttgcacattagacccaacctaaaagcccattaacatatttacaaaaag |
32982137 |
T |
 |
Q |
163 |
nnnnnnttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
|||| |||||||||||||||||||| |||||| ||||||||||||||||||||| |||||||| | |||||||| |
|
|
T |
32982136 |
aaaaatttggacaatctgaaaattgtcacacacaaataggtcttggaattttatttagcactctattgacagattcatctc |
32982056 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 80 - 243
Target Start/End: Original strand, 3828988 - 3829150
Alignment:
Q |
80 |
accccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnnnnnnnnnnnnttgggcaatct |
179 |
Q |
|
|
||||||| ||||||| ||| |||||| |||||||||||||||||||| ||||||||| ||||||||||| |||| ||||||||||| |
|
|
T |
3828988 |
accccggacggtcgctcgggttcgatcgataatttttgcacattaaacccaacccaaaagttcattaacacacttacaaaaagaaaaatttgggcaatct |
3829087 |
T |
 |
Q |
180 |
gaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
||||||| ||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||| |
|
|
T |
3829088 |
gaaaattttcatacgcaaataggtct-ggaattttatttagcacactattgacgggttcatctc |
3829150 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 76 - 242
Target Start/End: Original strand, 17445313 - 17445479
Alignment:
Q |
76 |
ggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnnnnnnnnnnnnttgggca |
175 |
Q |
|
|
||||||||| |||||||||||| || ||||||||||||||| |||||| | ||||||||| ||||||||| |||| ||||||| |
|
|
T |
17445313 |
ggcgaccccatgcggtcgcccgggctggatcaataatttttgtacattagatccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggca |
17445412 |
T |
 |
Q |
176 |
atctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatct |
242 |
Q |
|
|
||||||||||| ||||||||||||| ||| |||||||||||||||||| ||||||||||||||||| |
|
|
T |
17445413 |
atctgaaaattctcacacgcaaataggtctcggaattttatttagcacattattgacgggttcatct |
17445479 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 76 - 243
Target Start/End: Original strand, 35907552 - 35907719
Alignment:
Q |
76 |
ggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnnnnnnnnnnnnttgggca |
175 |
Q |
|
|
||||||| ||||||||||||||| || |||| ||||||||||||||||| || |||||||||| |||| ||| |||| ||||| | |
|
|
T |
35907552 |
ggcgacctcgggcggtcgcccgggcttgatcgataatttttgcacattagacccaacccaaaagccaattagtacacttacaaaaagaaaattttgggta |
35907651 |
T |
 |
Q |
176 |
atctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
||||||||||| ||||||||||||| ||| |||||||||||||||||| |||||||| ||||||||| |
|
|
T |
35907652 |
atctgaaaattctcacacgcaaataggtctcggaattttatttagcacattattgacgagttcatctc |
35907719 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 169 - 243
Target Start/End: Complemental strand, 321451 - 321377
Alignment:
Q |
169 |
ttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
|||||||||||||||||| ||| | ||||||| ||| ||||||||||||| |||| |||||||||||||||||| |
|
|
T |
321451 |
ttgggcaatctgaaaattctcatatgcaaataggtctcggaattttatttaacacattattgacgggttcatctc |
321377 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 156
Target Start/End: Original strand, 23313218 - 23313319
Alignment:
Q |
56 |
catgggcggttctagcgtatggcgaccccgggcggtcgcccggtctcgatcaataattt-ttgcacattaaacttgacccaaaagctcattaacacattt |
154 |
Q |
|
|
|||||||||||||| |||||||||| | |||||||| |||||| |||||| || |||| |||||||||| ||| || ||||| |||||||||||||| |
|
|
T |
23313218 |
catgggcggttctaccgtatggcgatctcgggcggttgcccgggctcgattgatgatttgttgcacattagactcaacataaaagttcattaacacattt |
23313317 |
T |
 |
Q |
155 |
ac |
156 |
Q |
|
|
|| |
|
|
T |
23313318 |
ac |
23313319 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 209 - 243
Target Start/End: Original strand, 33489839 - 33489873
Alignment:
Q |
209 |
aattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
||||||||||||||||||||||||||||||||||| |
|
|
T |
33489839 |
aattttatttagcacactattgacgggttcatctc |
33489873 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 209 - 243
Target Start/End: Complemental strand, 41972290 - 41972256
Alignment:
Q |
209 |
aattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
||||||||||||||||||||||||||||||||||| |
|
|
T |
41972290 |
aattttatttagcacactattgacgggttcatctc |
41972256 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 124
Target Start/End: Complemental strand, 41972440 - 41972394
Alignment:
Q |
77 |
gcgaccccgggcggtcgcccggtctcgatcaataatttttgcacatta |
124 |
Q |
|
|
||||||||||||||||||| || ||||||| ||||||||||||||||| |
|
|
T |
41972440 |
gcgaccccgggcggtcgcctgg-ctcgatcgataatttttgcacatta |
41972394 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 92; Significance: 8e-45; HSPs: 19)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 60 - 243
Target Start/End: Complemental strand, 34084305 - 34084122
Alignment:
Q |
60 |
ggcggttctagcgtatggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnnn |
159 |
Q |
|
|
|||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| | ||| ||||| ||||||||||||||| |
|
|
T |
34084305 |
ggcggttctaccgtatggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattaaattcaaccaaaaagtccattaacacatttacaaa |
34084206 |
T |
 |
Q |
160 |
nnnnnnnnnttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |
|
|
T |
34084205 |
aagaaaaatttgggcaatatgaaaattatcacacgcaaataggtcttggaattttatttagcacactattgatgggttcatctc |
34084122 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 56 - 243
Target Start/End: Complemental strand, 22968631 - 22968444
Alignment:
Q |
56 |
catgggcggttctagcgtatggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacattta |
155 |
Q |
|
|
|||||||||||||| ||| | ||||||||||||||||| |||| ||||||| ||||||||||||||||| |||| |||||||||| |||||||||||||| |
|
|
T |
22968631 |
catgggcggttctaccgtgtagcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagacttaacccaaaagcccattaacacattta |
22968532 |
T |
 |
Q |
156 |
cnnnnnnnnnnnnttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
| ||||||||||| |||||||||||||| ||||| ||||| |||||||||||||||||||||||| | |||||||| |
|
|
T |
22968531 |
caaaaagaaaaatttgggcaatctaaaaattgtcacacgtaaataggtcttgaaattttatttagcacactattgacagtttcatctc |
22968444 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 56 - 242
Target Start/End: Complemental strand, 6269613 - 6269427
Alignment:
Q |
56 |
catgggcggttctagcgtatggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacattta |
155 |
Q |
|
|
|||||||||||||| ||| | |||| |||||||||||| |||| ||||||| ||||||||||||||||| ||| |||||||||| |||||||||||||| |
|
|
T |
6269613 |
catgggcggttctaccgtgtagcgatcccgggcggtcgtccggactcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta |
6269514 |
T |
 |
Q |
156 |
cnnnnnnnnnnnnttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatct |
242 |
Q |
|
|
| |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| | ||||||| |
|
|
T |
6269513 |
caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatct |
6269427 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 56 - 243
Target Start/End: Original strand, 19390126 - 19390313
Alignment:
Q |
56 |
catgggcggttctagcgtatggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacattta |
155 |
Q |
|
|
|||||| ||||||| ||| ||||||||||||||||||| |||| |||||| ||||||||||||||||| ||| ||| ||||| ||||||||||||| |
|
|
T |
19390126 |
catgggaggttctaccgtgtggcgaccccgggcggtcgtccgggttcgatcgataatttttgcacattagactcaacctaaaagtctattaacacattta |
19390225 |
T |
 |
Q |
156 |
cnnnnnnnnnnnnttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
| |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| | |||||||| |
|
|
T |
19390226 |
caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctc |
19390313 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 59 - 243
Target Start/End: Complemental strand, 40081922 - 40081741
Alignment:
Q |
59 |
gggcggttctagcgtatggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnn |
158 |
Q |
|
|
||||||||||| ||||||||||| | || |||||||||| ||||||| |||||||||| |||||| ||| ||| |||||||||||||||||||||| |
|
|
T |
40081922 |
gggcggttctaccgtatggcgactctgga-ggtcgcccgggctcgatcgataatttttgaacattagactcaacc-aaaagctcattaacacatttacaa |
40081825 |
T |
 |
Q |
159 |
nnnnnnnnnnttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
||||||||| |||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||| |
|
|
T |
40081824 |
aaagaaaaatttgggcaatttgaaaattgtcacacgcaaatagatcttgg-attttttttagcacactattgacgggttcatctc |
40081741 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 56 - 243
Target Start/End: Original strand, 39771770 - 39771957
Alignment:
Q |
56 |
catgggcggttctagcgtatggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacattta |
155 |
Q |
|
|
|||||||||||| | ||| | |||||||||||||||||||||| |||| || ||||||||||||||||| ||| |||||||||| |||||||||||||| |
|
|
T |
39771770 |
catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacattta |
39771869 |
T |
 |
Q |
156 |
cnnnnnnnnnnnnttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
|||||||||||||||||||||||||| ||||| ||||| |||||||||| |||||||||||| | |||||||| |
|
|
T |
39771870 |
taaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgacagtttcatctc |
39771957 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 76 - 243
Target Start/End: Original strand, 45182981 - 45183148
Alignment:
Q |
76 |
ggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnnnnnnnnnnnnttgggca |
175 |
Q |
|
|
||||||||||||||||||||||| ||||||| ||||||||||| ||||| || |||||||||| ||||||||| |||| ||||||| |
|
|
T |
45182981 |
ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggca |
45183080 |
T |
 |
Q |
176 |
atctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
||||||||||| |||||| |||||| ||| ||||||||||||||||||||||||||||||||||||| |
|
|
T |
45183081 |
atctgaaaattctcacacacaaataggtctcggaattttatttagcacactattgacgggttcatctc |
45183148 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 54 - 243
Target Start/End: Complemental strand, 11018401 - 11018212
Alignment:
Q |
54 |
accatgggcggttctagcgtatggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatt |
153 |
Q |
|
|
||||||||||||| | ||| |||||| |||||||||||||| | ||||||| ||||||||||||||||| ||| |||||||||| ||||||||| | |
|
|
T |
11018401 |
accatgggcggtttcaccgtccggcgactccgggcggtcgcccaggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacact |
11018302 |
T |
 |
Q |
154 |
tacnnnnnnnnnnnnttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
||| |||||||||||||||||| ||||||||||||| ||| |||||||||||||||||| ||||||||||||||||| |
|
|
T |
11018301 |
tacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcagaattttatttagcacacaattgacgggttcatctc |
11018212 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 75 - 243
Target Start/End: Original strand, 27935177 - 27935345
Alignment:
Q |
75 |
tggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnnnnnnnnnnnnttgggc |
174 |
Q |
|
|
|||| |||| |||| ||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||| |||| |||||| |
|
|
T |
27935177 |
tggcaaccctgggcagtcgcccgggctcgatcgataatttttgcacattaaacccaacccaaaagctcattaacacacttacaaaaagaaaaatttgggc |
27935276 |
T |
 |
Q |
175 |
aatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
|||||||||||| ||| ||| ||||| ||| |||||||||||||||| |||||||||||||||||||| |
|
|
T |
27935277 |
aatctgaaaattctcatacgaaaataggtctcggaattttatttagcatactattgacgggttcatctc |
27935345 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 76 - 243
Target Start/End: Complemental strand, 6931061 - 6930894
Alignment:
Q |
76 |
ggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnnnnnnnnnnnnttgggca |
175 |
Q |
|
|
||||||||||| ||||||||||| ||||||| ||||||||||| ||||| | |||||||||| |||||||||||||| || |||| |
|
|
T |
6931061 |
ggcgaccccggacggtcgcccgggctcgatcgataatttttgcgcattagatccaacccaaaagccaattaacacatttacaaaaagaaaaatttaggca |
6930962 |
T |
 |
Q |
176 |
atctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||| |
|
|
T |
6930961 |
atctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc |
6930894 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 76 - 243
Target Start/End: Original strand, 33040953 - 33041120
Alignment:
Q |
76 |
ggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnnnnnnnnnnnnttgggca |
175 |
Q |
|
|
||||||||||||||||||| ||| |||||| |||||||||||| |||| || ||||||||||| ||||||||| |||| ||| || |
|
|
T |
33040953 |
ggcgaccccgggcggtcgctcgggctcgattgataatttttgcatattagacccaacccaaaagctaattaacacacttacaaaaagaaaaatttgaaca |
33041052 |
T |
 |
Q |
176 |
atctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
|| |||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |
|
|
T |
33041053 |
atttgaaaattttcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc |
33041120 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 76 - 243
Target Start/End: Original strand, 45335875 - 45336041
Alignment:
Q |
76 |
ggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnnnnnnnnnnnnttgggca |
175 |
Q |
|
|
||||||| ||||||||||||||| ||| ||| ||||||||| ||||||| || ||| ||||| |||||||||||||||| |||||| |
|
|
T |
45335875 |
ggcgacctcgggcggtcgcccggactcaatcgataatttttacacattagacccaaccaaaaag-tcattaacacatttacaaaaagaaaaatctgggca |
45335973 |
T |
 |
Q |
176 |
atctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
||||||||||| | ||||||||||| ||||||||||||||||||||||||| || ||| |||||||| |
|
|
T |
45335974 |
atctgaaaattcttacacgcaaataggtcttggaattttatttagcacactagtgccggattcatctc |
45336041 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 56 - 243
Target Start/End: Complemental strand, 6503756 - 6503569
Alignment:
Q |
56 |
catgggcggttctagcgtatggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacattta |
155 |
Q |
|
|
||||||||||| | ||| ||||||||||||||||||||||| ||||||| || ||||||||| |||| ||| |||||||||| |||| |||| ||| |
|
|
T |
6503756 |
catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgattatttttgcaaattagactcaacccaaaagccaattagcacactta |
6503657 |
T |
 |
Q |
156 |
cnnnnnnnnnnnnttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
| || |||||||||||||| ||||| ||||||| ||| ||| ||||||||||||||| ||||| ||||||||||| |
|
|
T |
6503656 |
caaaaagaaaaatttaagcaatctgaaaattctcacaggcaaataggtctcggatttttatttagcacacaattgatgggttcatctc |
6503569 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 169 - 243
Target Start/End: Original strand, 35514355 - 35514429
Alignment:
Q |
169 |
ttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
|||| |||| |||||||| |||| |||||||| ||| |||||||||||| |||||||||||||||||||||||| |
|
|
T |
35514355 |
ttggacaatatgaaaattctcactcgcaaataggtctaggaattttattttgcacactattgacgggttcatctc |
35514429 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 128
Target Start/End: Original strand, 22922141 - 22922209
Alignment:
Q |
60 |
ggcggttctagcgtatggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaact |
128 |
Q |
|
|
|||||||| | |||||||||| ||||||||||||| ||| ||||||| || |||||||||||||||||| |
|
|
T |
22922141 |
ggcggttccaccgtatggcgatcccgggcggtcgctcgggctcgatcgatcatttttgcacattaaact |
22922209 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 22922214 - 22922262
Alignment:
Q |
195 |
caaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
|||||| |||||||||||||||||| ||||||||||||||||||||||| |
|
|
T |
22922214 |
caaatagatcttggaattttatttaacacactattgacgggttcatctc |
22922262 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 76 - 227
Target Start/End: Complemental strand, 19565668 - 19565517
Alignment:
Q |
76 |
ggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnnnnnnnnnnnnttgggca |
175 |
Q |
|
|
||||| ||||||||||||||||| || ||| ||||||||||||||||| || ||| |||| ||||||||||||||| |||| || |
|
|
T |
19565668 |
ggcgatcccgggcggtcgcccgggttcaatcgataatttttgcacattagacccaaccaaaaaatccattaacacatttacaaaaagaaaaatttggaca |
19565569 |
T |
 |
Q |
176 |
atctgaaaattgtcacacgcaaatatatcttggaattttatttagcacacta |
227 |
Q |
|
|
||||||||||| | ||||||||||| ||| ||||||||||||||||||||| |
|
|
T |
19565568 |
atctgaaaattcttacacgcaaataggtctcggaattttatttagcacacta |
19565517 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 209 - 243
Target Start/End: Original strand, 5135421 - 5135455
Alignment:
Q |
209 |
aattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
||||||||||||||||||||||||||||||||||| |
|
|
T |
5135421 |
aattttatttagcacactattgacgggttcatctc |
5135455 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 124
Target Start/End: Original strand, 5354709 - 5354757
Alignment:
Q |
76 |
ggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacatta |
124 |
Q |
|
|
||||||||||||||||||||||| ||||||| ||||||| ||||||| |
|
|
T |
5354709 |
ggcgaccccgggcggtcgcccgggctcgatccttaattttctcacatta |
5354757 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0069 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0069
Description:
Target: scaffold0069; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 54 - 243
Target Start/End: Original strand, 17820 - 18009
Alignment:
Q |
54 |
accatgggcggttctagcgtatggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatt |
153 |
Q |
|
|
|||||||||||||||| ||| ||||||||||| ||| ||| |||| ||||||| ||||||||||||||||| ||| |||||||||| |||||||||||| |
|
|
T |
17820 |
accatgggcggttctaccgtgtggcgaccccgagcgatcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatt |
17919 |
T |
 |
Q |
154 |
tacnnnnnnnnnnnnttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
||| |||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||| | |||||||| |
|
|
T |
17920 |
tacaaaaagaaaaatttgggcaatctgaaaattgtcacatgtaaataggtcttgaaattttatttagcacactattgacagtttcatctc |
18009 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 56 - 243
Target Start/End: Complemental strand, 480644 - 480457
Alignment:
Q |
56 |
catgggcggttctagcgtatggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacattta |
155 |
Q |
|
|
|||||||||||| | ||| | |||||||||||||||||||||| ||||||| ||||||||||||||||| ||| ||| ||||||||||||||||||||| |
|
|
T |
480644 |
catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacattta |
480545 |
T |
 |
Q |
156 |
cnnnnnnnnnnnnttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
||||||||| |||||||||||||||| ||||| |||||||||||||||| ||||||||||||| | |||||||| |
|
|
T |
480544 |
taaaaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc |
480457 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold2142 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold2142
Description:
Target: scaffold2142; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 53 - 243
Target Start/End: Original strand, 499 - 689
Alignment:
Q |
53 |
aaccatgggcggttctagcgtatggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacat |
152 |
Q |
|
|
||||||||||||||| | ||| | |||| ||||||||||||||||| ||||||| ||||||||||||||||| ||| ||| |||||||||||||||||| |
|
|
T |
499 |
aaccatgggcggttccaccgtgtagcgatcccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacat |
598 |
T |
 |
Q |
153 |
ttacnnnnnnnnnnnnttgggcaatctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
||| ||||||||| |||||||||||||||| ||||| |||||||||||||||| ||||||||||||| | |||||||| |
|
|
T |
599 |
ttataaaaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc |
689 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0502 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0502
Description:
Target: scaffold0502; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 76 - 243
Target Start/End: Original strand, 5230 - 5397
Alignment:
Q |
76 |
ggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnnnnnnnnnnnnttgggca |
175 |
Q |
|
|
||||||||||||||||||||||| ||||||||||||||||||||||||| || | | |||||| ||||||||| |||| ||||||| |
|
|
T |
5230 |
ggcgaccccgggcggtcgcccgggctcgatcaataatttttgcacattagacccaatctaaaagccaattaacacacttacaaaaagaaaattttgggca |
5329 |
T |
 |
Q |
176 |
atctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
||||||||||| ||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||| |
|
|
T |
5330 |
atctgaaaattctcacatgcaaataggtctcggaattttatttagcacactattgacgggttcatctc |
5397 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0041 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0041
Description:
Target: scaffold0041; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 95 - 243
Target Start/End: Original strand, 52944 - 53092
Alignment:
Q |
95 |
ccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnnnnnnnnnnnnttgggcaatctgaaaattgtcacacg |
194 |
Q |
|
|
|||| ||||||| ||||||||||||||||| | || |||||||||| |||||||||||||| |||| ||||||||||||| ||||| | |
|
|
T |
52944 |
ccgggctcgatcgataatttttgcacattagatttaacccaaaagccaattaacacatttacaaaaagaaaaatttggacaatctgaaaattctcacatg |
53043 |
T |
 |
Q |
195 |
caaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
|||||| ||| ||||||||||||||||||||||||||||||||||||| |
|
|
T |
53044 |
caaataggtctcggaattttatttagcacactattgacgggttcatctc |
53092 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0154 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0154
Description:
Target: scaffold0154; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 76 - 243
Target Start/End: Original strand, 31480 - 31647
Alignment:
Q |
76 |
ggcgaccccgggcggtcgcccggtctcgatcaataatttttgcacattaaacttgacccaaaagctcattaacacatttacnnnnnnnnnnnnttgggca |
175 |
Q |
|
|
||||||||| | ||||||||||| ||||||| |||||||||||||| || || |||||||||| |||||||||| |||| |||| || |
|
|
T |
31480 |
ggcgaccccagacggtcgcccgggctcgatcgataatttttgcacactagacccaacccaaaagcccattaacacacttacaaaaagaaaaatttggaca |
31579 |
T |
 |
Q |
176 |
atctgaaaattgtcacacgcaaatatatcttggaattttatttagcacactattgacgggttcatctc |
243 |
Q |
|
|
||||||||||| |||| |||||||| ||| | |||||||||| ||||||||||||| |||||||||| |
|
|
T |
31580 |
atctgaaaattctcactcgcaaataggtctagtaattttattttgcacactattgacaggttcatctc |
31647 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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