View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0342_high_7 (Length: 361)

Name: NF0342_high_7
Description: NF0342
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0342_high_7
NF0342_high_7
[»] chr7 (55 HSPs)
chr7 (22-325)||(37217529-37217819)
chr7 (107-257)||(10072130-10072280)
chr7 (109-257)||(18125531-18125679)
chr7 (109-257)||(45886068-45886216)
chr7 (110-257)||(25980228-25980374)
chr7 (109-255)||(16865813-16865959)
chr7 (26-257)||(29292269-29292501)
chr7 (110-257)||(45709156-45709303)
chr7 (104-254)||(18683597-18683747)
chr7 (107-253)||(44986199-44986344)
chr7 (109-257)||(21702321-21702469)
chr7 (109-257)||(30650272-30650420)
chr7 (109-257)||(35074111-35074258)
chr7 (126-257)||(37196308-37196439)
chr7 (118-255)||(3773646-3773783)
chr7 (109-257)||(39316636-39316783)
chr7 (109-210)||(41741752-41741853)
chr7 (110-255)||(43507077-43507221)
chr7 (109-257)||(37578905-37579053)
chr7 (111-243)||(44794331-44794463)
chr7 (117-257)||(7779649-7779791)
chr7 (111-257)||(38152542-38152688)
chr7 (116-257)||(25905270-25905411)
chr7 (109-250)||(46127466-46127607)
chr7 (272-316)||(6467765-6467809)
chr7 (109-252)||(4101120-4101262)
chr7 (126-257)||(17851507-17851638)
chr7 (109-243)||(3156681-3156815)
chr7 (127-257)||(38140111-38140241)
chr7 (107-204)||(17885141-17885238)
chr7 (111-232)||(18826176-18826296)
chr7 (104-257)||(27062582-27062735)
chr7 (114-257)||(5567449-5567592)
chr7 (22-89)||(31345274-31345341)
chr7 (116-211)||(39456289-39456384)
chr7 (107-225)||(17884906-17885024)
chr7 (99-229)||(29855736-29855866)
chr7 (191-257)||(37181916-37181981)
chr7 (107-257)||(44734660-44734810)
chr7 (22-243)||(23533883-23534101)
chr7 (116-229)||(43217930-43218043)
chr7 (109-253)||(27850627-27850770)
chr7 (26-89)||(3773817-3773880)
chr7 (110-177)||(16078735-16078802)
chr7 (274-316)||(1518776-1518818)
chr7 (155-257)||(8265427-8265529)
chr7 (195-257)||(10996236-10996298)
chr7 (155-257)||(42908400-42908502)
chr7 (111-212)||(2632274-2632374)
chr7 (24-81)||(5432255-5432312)
chr7 (274-315)||(36946340-36946381)
chr7 (272-316)||(28230516-28230559)
chr7 (274-318)||(31985563-31985607)
chr7 (155-211)||(45379817-45379873)
chr7 (276-316)||(48706047-48706087)
[»] chr2 (41 HSPs)
chr2 (109-257)||(13830373-13830521)
chr2 (107-257)||(7314951-7315101)
chr2 (110-256)||(37473034-37473180)
chr2 (116-253)||(30846586-30846723)
chr2 (116-257)||(36128418-36128559)
chr2 (109-257)||(10208733-10208881)
chr2 (109-257)||(24414435-24414583)
chr2 (116-257)||(37999123-37999263)
chr2 (126-257)||(9632035-9632166)
chr2 (116-250)||(37106350-37106484)
chr2 (112-253)||(42995423-42995563)
chr2 (118-271)||(6028201-6028358)
chr2 (109-257)||(45256461-45256609)
chr2 (22-257)||(13954323-13954558)
chr2 (22-257)||(14095530-14095765)
chr2 (99-257)||(35248735-35248892)
chr2 (24-89)||(34544592-34544657)
chr2 (109-177)||(45115298-45115366)
chr2 (116-231)||(26755397-26755512)
chr2 (116-254)||(3546781-3546919)
chr2 (22-225)||(29657014-29657214)
chr2 (160-257)||(11009090-11009187)
chr2 (117-212)||(8916247-8916342)
chr2 (22-89)||(34214934-34215001)
chr2 (160-257)||(31942509-31942606)
chr2 (272-316)||(27900675-27900719)
chr2 (22-89)||(31601044-31601112)
chr2 (20-60)||(37786951-37786991)
chr2 (191-259)||(40734982-40735049)
chr2 (155-257)||(10920300-10920402)
chr2 (155-253)||(14331184-14331282)
chr2 (191-257)||(15546331-15546397)
chr2 (274-316)||(34517170-34517212)
chr2 (191-256)||(16227075-16227140)
chr2 (272-317)||(41854941-41854985)
chr2 (116-212)||(12341496-12341592)
chr2 (116-176)||(16105342-16105402)
chr2 (126-254)||(18106399-18106527)
chr2 (272-316)||(33452486-33452529)
chr2 (146-258)||(34544708-34544819)
chr2 (272-316)||(44465770-44465813)
[»] chr6 (35 HSPs)
chr6 (109-257)||(10188377-10188525)
chr6 (109-257)||(2366963-2367111)
chr6 (109-257)||(3484226-3484374)
chr6 (109-257)||(32853481-32853629)
chr6 (99-230)||(29340436-29340567)
chr6 (99-230)||(29342352-29342483)
chr6 (126-257)||(5863692-5863823)
chr6 (126-257)||(27534332-27534463)
chr6 (107-257)||(9442286-9442436)
chr6 (22-257)||(9402180-9402415)
chr6 (126-257)||(12141034-12141165)
chr6 (155-257)||(9458335-9458437)
chr6 (109-217)||(18908548-18908656)
chr6 (118-257)||(24225338-24225476)
chr6 (110-257)||(30815888-30816035)
chr6 (127-257)||(256874-257004)
chr6 (117-210)||(10142828-10142921)
chr6 (100-249)||(20348651-20348800)
chr6 (110-243)||(32052707-32052840)
chr6 (22-89)||(2126900-2126967)
chr6 (146-229)||(20611250-20611333)
chr6 (22-85)||(32959672-32959735)
chr6 (111-256)||(11762084-11762229)
chr6 (166-255)||(14505738-14505827)
chr6 (117-186)||(32959578-32959647)
chr6 (110-177)||(253125-253192)
chr6 (99-258)||(3244987-3245144)
chr6 (116-227)||(14254627-14254738)
chr6 (191-257)||(33061994-33062060)
chr6 (25-74)||(29340571-29340620)
chr6 (25-74)||(29342298-29342347)
chr6 (272-316)||(2539519-2539562)
chr6 (272-316)||(5638930-5638973)
chr6 (272-316)||(10310449-10310493)
chr6 (23-51)||(34179287-34179315)
[»] chr3 (41 HSPs)
chr3 (108-256)||(44252379-44252527)
chr3 (110-257)||(34154053-34154200)
chr3 (116-257)||(7470088-7470228)
chr3 (108-257)||(44107101-44107250)
chr3 (126-257)||(39728319-39728450)
chr3 (116-272)||(34025577-34025737)
chr3 (118-257)||(44638912-44639051)
chr3 (122-257)||(29283972-29284107)
chr3 (110-229)||(4557609-4557728)
chr3 (107-257)||(23580465-23580614)
chr3 (117-251)||(49025325-49025459)
chr3 (109-251)||(52572257-52572394)
chr3 (109-254)||(49579704-49579849)
chr3 (109-212)||(44179009-44179112)
chr3 (109-231)||(17146453-17146575)
chr3 (119-257)||(41937362-41937500)
chr3 (107-256)||(22536145-22536294)
chr3 (116-257)||(23154317-23154458)
chr3 (107-176)||(29842025-29842094)
chr3 (110-257)||(4016338-4016484)
chr3 (109-252)||(19111378-19111521)
chr3 (118-257)||(31127107-31127246)
chr3 (126-257)||(39655583-39655714)
chr3 (160-257)||(6738726-6738823)
chr3 (161-257)||(23547333-23547429)
chr3 (115-243)||(30905133-30905261)
chr3 (272-316)||(45712132-45712176)
chr3 (275-318)||(29035784-29035827)
chr3 (109-178)||(43582296-43582362)
chr3 (23-89)||(30905048-30905114)
chr3 (191-257)||(44162421-44162487)
chr3 (274-320)||(54229941-54229987)
chr3 (116-257)||(48391120-48391261)
chr3 (109-213)||(2487452-2487556)
chr3 (272-316)||(3902854-3902897)
chr3 (284-316)||(5127947-5127979)
chr3 (109-217)||(23329838-23329946)
chr3 (272-316)||(29048410-29048454)
chr3 (272-316)||(30721852-30721896)
chr3 (109-177)||(53631618-53631686)
chr3 (116-248)||(55438990-55439121)
[»] scaffold0014 (1 HSPs)
scaffold0014 (116-275)||(14455-14617)
[»] chr5 (46 HSPs)
chr5 (116-257)||(15889848-15889989)
chr5 (117-257)||(40517444-40517584)
chr5 (116-249)||(5908993-5909126)
chr5 (127-256)||(17853602-17853730)
chr5 (109-255)||(28045291-28045437)
chr5 (109-257)||(20973789-20973937)
chr5 (109-257)||(23045317-23045465)
chr5 (114-257)||(40188025-40188168)
chr5 (107-254)||(13402305-13402452)
chr5 (25-257)||(18452165-18452399)
chr5 (116-257)||(22695212-22695353)
chr5 (107-257)||(3565027-3565170)
chr5 (114-257)||(27900770-27900913)
chr5 (274-318)||(32842017-32842061)
chr5 (154-257)||(1218424-1218527)
chr5 (104-217)||(12774089-12774202)
chr5 (272-320)||(1350354-1350402)
chr5 (272-316)||(13908577-13908621)
chr5 (109-257)||(30996235-30996382)
chr5 (109-177)||(33862486-33862554)
chr5 (26-89)||(8020362-8020425)
chr5 (117-176)||(12834888-12834947)
chr5 (22-89)||(29664715-29664781)
chr5 (24-87)||(35583862-35583925)
chr5 (276-318)||(27212742-27212784)
chr5 (35-88)||(7350699-7350752)
chr5 (104-217)||(12712825-12712938)
chr5 (109-271)||(27088655-27088821)
chr5 (116-212)||(36579562-36579658)
chr5 (109-257)||(38006774-38006922)
chr5 (155-257)||(24207277-24207377)
chr5 (207-257)||(38972502-38972552)
chr5 (274-316)||(40613723-40613765)
chr5 (278-315)||(4028027-4028064)
chr5 (116-253)||(4920473-4920610)
chr5 (22-87)||(6809910-6809974)
chr5 (109-150)||(27303039-27303080)
chr5 (116-177)||(35311534-35311595)
chr5 (99-140)||(39422114-39422155)
chr5 (109-225)||(6093409-6093525)
chr5 (126-273)||(6156231-6156381)
chr5 (117-257)||(12866864-12867004)
chr5 (272-316)||(18514831-18514875)
chr5 (272-316)||(20891643-20891686)
chr5 (272-316)||(38692831-38692874)
chr5 (272-316)||(39524806-39524849)
[»] chr1 (47 HSPs)
chr1 (116-257)||(40087768-40087909)
chr1 (109-257)||(20774269-20774417)
chr1 (109-257)||(24710495-24710643)
chr1 (110-257)||(34610711-34610858)
chr1 (107-231)||(17134610-17134734)
chr1 (107-257)||(17092261-17092411)
chr1 (109-251)||(24237064-24237206)
chr1 (117-257)||(28297570-28297710)
chr1 (22-89)||(25155105-25155172)
chr1 (116-257)||(13390092-13390233)
chr1 (109-257)||(36187525-36187673)
chr1 (22-253)||(8880032-8880261)
chr1 (123-257)||(16903141-16903275)
chr1 (107-257)||(23966495-23966645)
chr1 (107-257)||(45866487-45866637)
chr1 (155-257)||(51421532-51421634)
chr1 (110-271)||(49742225-49742385)
chr1 (22-89)||(14890907-14890973)
chr1 (126-257)||(23493645-23493776)
chr1 (191-271)||(14892325-14892409)
chr1 (22-89)||(14902885-14902951)
chr1 (273-316)||(28866678-28866721)
chr1 (116-211)||(32594579-32594674)
chr1 (22-89)||(48538179-48538246)
chr1 (274-316)||(34006329-34006371)
chr1 (107-176)||(34060321-34060390)
chr1 (155-271)||(35077553-35077670)
chr1 (20-89)||(42729220-42729289)
chr1 (272-316)||(3561383-3561427)
chr1 (272-316)||(26723536-26723580)
chr1 (107-175)||(39616021-39616089)
chr1 (125-212)||(19572814-19572901)
chr1 (114-257)||(38686290-38686433)
chr1 (155-257)||(3628324-3628426)
chr1 (155-257)||(5180688-5180790)
chr1 (274-316)||(6223784-6223826)
chr1 (155-229)||(19892616-19892690)
chr1 (278-316)||(24472875-24472913)
chr1 (282-316)||(25563454-25563488)
chr1 (155-257)||(34673608-34673710)
chr1 (191-257)||(44792642-44792708)
chr1 (107-229)||(50426956-50427077)
chr1 (114-231)||(9983194-9983311)
chr1 (120-177)||(29936134-29936191)
chr1 (192-257)||(41479563-41479628)
chr1 (272-316)||(32817659-32817702)
chr1 (109-257)||(44615779-44615927)
[»] chr8 (38 HSPs)
chr8 (109-257)||(34301457-34301605)
chr8 (104-258)||(15068906-15069060)
chr8 (117-258)||(6388876-6389017)
chr8 (116-273)||(2076146-2076307)
chr8 (109-257)||(32302697-32302845)
chr8 (116-257)||(29109128-29109269)
chr8 (109-257)||(28977417-28977565)
chr8 (110-253)||(33633286-33633429)
chr8 (20-257)||(17084385-17084621)
chr8 (128-257)||(24927586-24927715)
chr8 (117-257)||(4231030-4231170)
chr8 (109-257)||(20399273-20399421)
chr8 (109-253)||(34776103-34776247)
chr8 (112-257)||(11255311-11255456)
chr8 (116-257)||(39445872-39446013)
chr8 (116-230)||(1063173-1063287)
chr8 (155-257)||(17220354-17220456)
chr8 (155-257)||(18151092-18151194)
chr8 (148-257)||(27932072-27932181)
chr8 (155-259)||(29918216-29918320)
chr8 (22-199)||(14687128-14687304)
chr8 (155-256)||(24870372-24870473)
chr8 (109-257)||(17468893-17469041)
chr8 (166-257)||(14185981-14186072)
chr8 (104-226)||(15174171-15174293)
chr8 (155-257)||(27058679-27058781)
chr8 (22-89)||(8545627-8545695)
chr8 (276-316)||(40392607-40392647)
chr8 (118-177)||(36132227-36132286)
chr8 (20-59)||(39379854-39379893)
chr8 (23-89)||(9476283-9476349)
chr8 (155-257)||(31323506-31323610)
chr8 (272-316)||(36317858-36317903)
chr8 (272-316)||(4259683-4259727)
chr8 (107-223)||(4280242-4280358)
chr8 (26-90)||(6388787-6388851)
chr8 (272-316)||(42280939-42280982)
chr8 (272-316)||(44106291-44106334)
[»] chr4 (62 HSPs)
chr4 (109-257)||(47550657-47550805)
chr4 (29-230)||(25265432-25265632)
chr4 (120-257)||(31918875-31919012)
chr4 (109-257)||(6382578-6382726)
chr4 (109-257)||(7608613-7608761)
chr4 (107-257)||(26564474-26564624)
chr4 (126-271)||(44317172-44317318)
chr4 (109-257)||(55826927-55827075)
chr4 (128-257)||(15987552-15987681)
chr4 (100-257)||(36918708-36918865)
chr4 (28-243)||(8844072-8844281)
chr4 (28-243)||(8857036-8857245)
chr4 (109-257)||(37348766-37348914)
chr4 (114-257)||(10286911-10287054)
chr4 (118-257)||(11123180-11123319)
chr4 (26-217)||(37926183-37926373)
chr4 (104-257)||(16216973-16217120)
chr4 (115-212)||(12075999-12076095)
chr4 (113-257)||(30034278-30034423)
chr4 (109-257)||(4766619-4766767)
chr4 (109-257)||(5902918-5903066)
chr4 (109-257)||(11027715-11027863)
chr4 (116-257)||(48459129-48459270)
chr4 (273-317)||(37222037-37222081)
chr4 (110-257)||(1724615-1724762)
chr4 (111-257)||(21423504-21423650)
chr4 (155-257)||(44887549-44887651)
chr4 (99-239)||(19549254-19549394)
chr4 (104-256)||(21544200-21544352)
chr4 (26-198)||(33616398-33616569)
chr4 (99-243)||(40420926-40421070)
chr4 (126-257)||(6482346-6482477)
chr4 (26-89)||(42907636-42907699)
chr4 (134-253)||(43892158-43892277)
chr4 (195-257)||(39772111-39772172)
chr4 (27-177)||(7334467-7334619)
chr4 (26-79)||(17113285-17113338)
chr4 (116-257)||(39046600-39046741)
chr4 (155-271)||(47239735-47239849)
chr4 (272-320)||(3703293-3703341)
chr4 (24-88)||(39085903-39085967)
chr4 (166-257)||(3737440-3737531)
chr4 (102-229)||(4741553-4741679)
chr4 (22-89)||(12075910-12075977)
chr4 (146-217)||(18423252-18423322)
chr4 (22-89)||(25940896-25940963)
chr4 (25-84)||(35304798-35304857)
chr4 (109-176)||(36306446-36306513)
chr4 (274-313)||(41323143-41323182)
chr4 (128-255)||(43309112-43309239)
chr4 (155-257)||(14606280-14606382)
chr4 (22-64)||(36918898-36918940)
chr4 (107-257)||(42774404-42774553)
chr4 (116-257)||(53906587-53906729)
chr4 (283-316)||(7863323-7863356)
chr4 (104-217)||(10574748-10574861)
chr4 (24-57)||(12505802-12505835)
chr4 (272-316)||(19835596-19835639)
chr4 (272-316)||(31582470-31582513)
chr4 (272-316)||(40703740-40703783)
chr4 (272-316)||(46440322-46440365)
chr4 (155-253)||(53910189-53910284)
[»] scaffold0189 (1 HSPs)
scaffold0189 (109-256)||(3896-4043)
[»] scaffold1630 (1 HSPs)
scaffold1630 (135-257)||(1260-1382)
[»] scaffold0519 (1 HSPs)
scaffold0519 (112-257)||(9939-10084)
[»] scaffold0095 (1 HSPs)
scaffold0095 (116-257)||(32834-32975)
[»] scaffold0015 (1 HSPs)
scaffold0015 (104-229)||(56217-56342)
[»] scaffold0036 (1 HSPs)
scaffold0036 (109-257)||(33032-33180)
[»] scaffold0198 (1 HSPs)
scaffold0198 (148-257)||(3678-3787)
[»] scaffold0244 (2 HSPs)
scaffold0244 (22-89)||(4858-4925)
scaffold0244 (101-227)||(4939-5064)
[»] scaffold0022 (1 HSPs)
scaffold0022 (117-212)||(90279-90374)
[»] scaffold0008 (2 HSPs)
scaffold0008 (104-254)||(67366-67516)
scaffold0008 (104-254)||(75209-75359)
[»] scaffold0294 (1 HSPs)
scaffold0294 (109-251)||(14420-14562)
[»] scaffold0097 (1 HSPs)
scaffold0097 (111-177)||(33300-33366)
[»] scaffold0005 (1 HSPs)
scaffold0005 (155-257)||(210996-211098)
[»] scaffold0157 (1 HSPs)
scaffold0157 (24-57)||(14642-14675)
[»] scaffold0007 (1 HSPs)
scaffold0007 (110-151)||(199092-199133)


Alignment Details
Target: chr7 (Bit Score: 151; Significance: 8e-80; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 22 - 325
Target Start/End: Complemental strand, 37217819 - 37217529
Alignment:
Q  22 catcatctctttgctggataatgcattacatcattgtgctcggcactaaaaaatacttttatttttatcnnnnnnnnttatccactacggggatggggat 121  Q
    ||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||         |||||||||||||||||          
T  37217819 catcatctccttgctggataatgcattacaacattgtgctcgggactaaaaaatacttttatttttataaaaaaaaattatccactacggggat------ 37217726  T
Q  122 ggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttggg 221  Q
               ||||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  37217725 -----------acccgaacttgtaggggacgaagatgggattctatttctcatccctgctaggtacggataaggtaacaggtaaatatatgggagttggg 37217637  T
Q  222 tatggggacgagaaaggtaaaatccgt----ccccacccccaatgccatgcctacctaaacaccctttttcaagggaaaaacagttcggtttatataatt 317  Q
    |||||||||||| ||||||||| ||||    |||| ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||     
T  37217636 tatggggacgaggaaggtaaaacccgtccccccccccccccaatgccgtgcctacctaaacacactttttcaagggaaaaacagttcggtttatataatc 37217537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 107 - 257
Target Start/End: Complemental strand, 10072280 - 10072130
Alignment:
Q  107 tacggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaa 206  Q
    ||||||||| ||||||||| |||||||||||||| ||| ||||| || |||||||||| |||||||||||||| | |||| || |||||||||||||||     
T  10072280 tacggggatagggatggggtggggatacccgaacccgtcggggacgaggatgagattcaatttctcatccctgttgggtatgggtagggtaacaggtaag 10072181  T
Q  207 tatatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    |||||| || | ||||||||||| | | ||||||||| |||| ||||||||    
T  10072180 tatatgagaatcgggtatggggatggggaaggtaaaacccgttcccacccc 10072130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 109 - 257
Target Start/End: Original strand, 18125531 - 18125679
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaata 208  Q
    |||||| ||||||||||||||||||||||||| ||| ||||| |  |||||||||| |||||||||||| | ||| || ||||||| ||||  |||| ||    
T  18125531 cggggacggggatggggcggggatacccgaacccgtcggggacggggatgagattcaatttctcatccccgttagatatggataggataacgagtaagta 18125630  T
Q  209 tatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    |||| || | ||||||||| ||  | ||||||||| |||||||||||||    
T  18125631 tatgagaatcgggtatgggaacagggaaggtaaaacccgtccccacccc 18125679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 109 - 257
Target Start/End: Original strand, 45886068 - 45886216
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaata 208  Q
    |||||| || |||||||||||||||||||||| ||| ||||| |  |||||||||| |||||||||||| | | | || || ||||||||||||||| ||    
T  45886068 cggggacggtgatggggcggggatacccgaacccgtcggggacggggatgagattcaatttctcatccccgttggatatgggtagggtaacaggtaagta 45886167  T
Q  209 tatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    |||| || |||||||||| |||| | ||||||||| || || |||||||    
T  45886168 tatgagaattgggtatggagacggggaaggtaaaacccatctccacccc 45886216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 110 - 257
Target Start/End: Original strand, 25980228 - 25980374
Alignment:
Q  110 ggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatat 209  Q
    ||||||||||||||||||||||||||||||| ||| | ||| | ||||||||||| |||||| ||||| | | |||| || ||||||||| ||||| |||    
T  25980228 ggggatggggatggggcggggatacccgaacccgttgaggacggagatgagattcaatttcttatccccgttgggtatgggtagggtaacgggtaagtat 25980327  T
Q  210 atgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    ||| || | |||| |||||||| | ||||||||| || ||||||||||    
T  25980328 atgagaatcgggtttggggacg-ggaaggtaaaacccatccccacccc 25980374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 109 - 255
Target Start/End: Complemental strand, 16865959 - 16865813
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaata 208  Q
    |||||| |||||||||| |||||||||||||| ||| ||||| |  |||| ||||| |||||||||||| | | |||| || ||||||||| ||||| ||    
T  16865959 cggggacggggatggggtggggatacccgaacccgtcggggacggggatgggattcaatttctcatccccgttgggtatgggtagggtaacgggtaagta 16865860  T
Q  209 tatgggagttgggtatggggacgagaaaggtaaaatccgtccccacc 255  Q
    ||||  | | ||||||||||| ||| ||||||||| |||||||||||    
T  16865859 tatgataatcgggtatggggatgaggaaggtaaaacccgtccccacc 16865813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 26 - 257
Target Start/End: Complemental strand, 29292501 - 29292269
Alignment:
Q  26 atctctttgctggataatgcattacatcattgtgctcggcactaaaaaatacttttatttttatcnnnnnnnn--ttatccactacggggatggggatgg 123  Q
    ||||||||| |||||||||||||||| |||| |||||||  |||||||||||||| ||||||||           ||||||||||| |||||||||||||    
T  29292501 atctctttgttggataatgcattacaacattctgctcgggcctaaaaaatacttt-atttttattagaaaaaaaattatccactacagggatggggatgg 29292403  T
Q  124 ggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttgggta 223  Q
    | ||||||||||||| | ||| ||||| || |||||||||| ||||| |||| | | | |||| || ||||||||| | |||  |||||  ||| | |||    
T  29292402 gtcggggatacccgatcccgttggggacgaggatgagattcgatttcacatctccgttgggtatgggtagggtaacggataagcatatgaaagtagagta 29292303  T
Q  224 tggggacgagaaaggtaaaatccgtccccacccc 257  Q
    |||| | | | ||||||||| |||||||||||||    
T  29292302 tgggaatggggaaggtaaaacccgtccccacccc 29292269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 110 - 257
Target Start/End: Original strand, 45709156 - 45709303
Alignment:
Q  110 ggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatat 209  Q
    ||||| || |||||||||| ||||||||||| ||| | ||| |  |||| ||||| |||||||||||| | | |||| ||||||||||||| ||||||||    
T  45709156 ggggacggagatggggcggtgatacccgaacccgtcgaggacggggatgggattcaatttctcatcccagttgggtatggatagggtaacatgtaaatat 45709255  T
Q  210 atgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    ||   | | | |||||||||||  ||||||||||||||||||||||||    
T  45709256 atcataatcgagtatggggacggaaaaggtaaaatccgtccccacccc 45709303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 104 - 254
Target Start/End: Complemental strand, 18683747 - 18683597
Alignment:
Q  104 cactacggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggt 203  Q
    ||||||||||| |||||||||||||| ||||  |||| | | ||||| |  |||||||||| ||||||||| |||  | | || || |||| ||||||||    
T  18683747 cactacggggacggggatggggcgggaatacatgaacccattggggacggggatgagattcaatttctcattccttttggatatgggtaggataacaggt 18683648  T
Q  204 aaatatatgggagttgggtatggggacgagaaaggtaaaatccgtccccac 254  Q
    || ||||||||||| ||| ||||||| |||||||| |||| ||||||||||    
T  18683647 aagtatatgggagtaggggatggggatgagaaaggcaaaacccgtccccac 18683597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 107 - 253
Target Start/End: Original strand, 44986199 - 44986344
Alignment:
Q  107 tacggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaa 206  Q
    ||||||||||||||||||| |||||||||||||| ||| ||||| | ||||||| ||| |||||||||| | | | | ||  | |||||||||||||||     
T  44986199 tacggggatggggatggggtggggatacccgaacccgtcggggacggagatgagcttcaatttctcatctc-gttggatataggtagggtaacaggtaag 44986297  T
Q  207 tatatgggagttgggtatggggacgagaaaggtaaaatccgtcccca 253  Q
    |||||| || | ||||||||||||| | |||||||||  ||||||||    
T  44986298 tatatgagaatcgggtatggggacggggaaggtaaaactcgtcccca 44986344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 109 - 257
Target Start/End: Complemental strand, 21702469 - 21702321
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaata 208  Q
    |||||| ||||||||||||||||||||||||| ||| ||||| |  |||  ||||| |||||||||||| | |  ||| || ||||||| | ||||| ||    
T  21702469 cggggacggggatggggcggggatacccgaacccgtcggggacggggataggattcaatttctcatccccgttgagtatgggtagggtagcgggtaagta 21702370  T
Q  209 tatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    |||| || | ||||||||||| | | ||||||||| |||||||||||||    
T  21702369 tatgagaatcgggtatggggatggggaaggtaaaacccgtccccacccc 21702321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 109 - 257
Target Start/End: Complemental strand, 30650420 - 30650272
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaata 208  Q
    |||||| || |||||||||||||||||||||| ||| ||||| |  |||||||||| |||||||||||| | | | || || ||||||||| ||||| ||    
T  30650420 cggggacggtgatggggcggggatacccgaacccgtcggggacggggatgagattcaatttctcatccccgttggatatgggtagggtaacgggtaagta 30650321  T
Q  209 tatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    |||| || | |||||||| || | | ||||||||| |||||||| ||||    
T  30650320 tatgagaatcgggtatggagatggggaaggtaaaacccgtcccctcccc 30650272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 109 - 257
Target Start/End: Complemental strand, 35074258 - 35074111
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaata 208  Q
    |||||| | ||||||||||||||||||||||| ||| ||||| |  |||| ||||| |||||||||||| | | |||| || ||||||||| ||||| ||    
T  35074258 cggggacgaggatggggcggggatacccgaacccgtcggggacggggatgggattcgatttctcatccccgttgggtatgggtagggtaacgggtaagta 35074159  T
Q  209 tatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    |||| || | |||||| || ||| | ||||||||| |||||||||||||    
T  35074158 tatgagaatcgggtat-ggaacggggaaggtaaaacccgtccccacccc 35074111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 126 - 257
Target Start/End: Original strand, 37196308 - 37196439
Alignment:
Q  126 cggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttgggtatg 225  Q
    ||||||||||||||| ||| | ||| | ||||||||||| |||||||||||| | | |||| || ||||||||| ||||| |||| | || |  ||||||    
T  37196308 cggggatacccgaacccgtcgaggacggagatgagattcaatttctcatccccgttgggtatgggtagggtaacgggtaagtatacgagaatcaggtatg 37196407  T
Q  226 gggacgagaaaggtaaaatccgtccccacccc 257  Q
     ||||| ||||||||||| |||||||||||||    
T  37196408 aggacgggaaaggtaaaacccgtccccacccc 37196439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 118 - 255
Target Start/End: Complemental strand, 3773783 - 3773646
Alignment:
Q  118 ggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagt 217  Q
    |||||||||||  |||||| ||| |||  |||||   |||||||||| ||||||||||||  || | || || || |||||||||||| |||||| ||||    
T  3773783 ggatggggcggaaatacccaaacccgtcagggatagggatgagattcgatttctcatccccactggatatgggtaaggtaacaggtaagtatatgcgagt 3773684  T
Q  218 tgggtatggggacgagaaaggtaaaatccgtccccacc 255  Q
     || |||||||||| ||||||||||| |||||||||||    
T  3773683 aggatatggggacgggaaaggtaaaacccgtccccacc 3773646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 109 - 257
Target Start/End: Complemental strand, 39316783 - 39316636
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatga-agatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaat 207  Q
    |||||| ||||||||||||||||||||||||| ||| ||||| || | ||| ||||| |||||||||||| | | |||| || ||||||||| |||||||    
T  39316783 cggggaaggggatggggcggggatacccgaacccgtcggggacgagaaatg-gattcaatttctcatccc-gttgggtatgggtagggtaacgggtaaat 39316686  T
Q  208 atatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    ||||| || | ||||||||| | | | ||||||||| || ||||||||||    
T  39316685 atatgagaatcgggtatgggaatggggaaggtaaaacccatccccacccc 39316636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 109 - 210
Target Start/End: Original strand, 41741752 - 41741853
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaata 208  Q
    |||||||||||||| ||||||||||||||||  ||| ||||| || |||||||||| |||||||||||||| | | || || |||| |||| ||||||||    
T  41741752 cggggatggggatgaggcggggatacccgaatccgtcggggacgatgatgagattcaatttctcatccctgttggatatgggtaggataacgggtaaata 41741851  T
Q  209 ta 210  Q
    ||    
T  41741852 ta 41741853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 110 - 255
Target Start/End: Complemental strand, 43507221 - 43507077
Alignment:
Q  110 ggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatat 209  Q
    |||||||||||||| | ||||||||||||||  || ||||| |  |||||||||| |||| ||||||| | |  ||| || ||||||||||||||| |||    
T  43507221 ggggatggggatggagtggggatacccgaacctgtcggggacggggatgagattcaatttgtcatccc-gttgagtatgggtagggtaacaggtaagtat 43507123  T
Q  210 atgggagttgggtatggggacgagaaaggtaaaatccgtccccacc 255  Q
    ||| || | ||||||||| ||| | ||||||||| |||||||||||    
T  43507122 atgagaatcgggtatgggaacggggaaggtaaaacccgtccccacc 43507077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 109 - 257
Target Start/End: Complemental strand, 37579053 - 37578905
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaata 208  Q
    |||||| ||||||||||| ||||||||||||| ||| |||||||  |||| | ||| |||||||||||| | | |||| |  ||||||||| ||||| ||    
T  37579053 cggggacggggatggggcagggatacccgaacccgtcggggatggggatgtggttcaatttctcatccccgttgggtatgagtagggtaacgggtaagta 37578954  T
Q  209 tatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    ||||  | | ||||||||||| | | || ||||||||| ||||||||||    
T  37578953 tatgataatcgggtatggggatggggaatgtaaaatccatccccacccc 37578905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 111 - 243
Target Start/End: Original strand, 44794331 - 44794463
Alignment:
Q  111 gggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatata 210  Q
    |||| |||||||||||||||| ||| |||| | | || || |  |||||||||| |||||||||||||| ||| || || ||||||||||||||||||||    
T  44794331 gggacggggatggggcggggacacctgaacccttcggagacggggatgagattcgatttctcatccctgttagatatgggtagggtaacaggtaaatata 44794430  T
Q  211 tgggagttgggtatggggacgagaaaggtaaaa 243  Q
    ||  | || ||||||| |||| |||| ||||||    
T  44794431 tgaaaattaggtatggagacgggaaatgtaaaa 44794463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 117 - 257
Target Start/End: Complemental strand, 7779791 - 7779649
Alignment:
Q  117 gggatggggcggggatacccgaactcgtaggggatgaag--atgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatggg 214  Q
    |||||| ||||||||||||||||| ||| ||||| |  |  ||||||||| |||||||||||| | | | || || ||||||||||| ||| |||| | |    
T  7779791 gggatgtggcggggatacccgaacccgtcggggacggggggatgagattcaatttctcatccccgttggatatgggtagggtaacagataagtatacgag 7779692  T
Q  215 agttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    | | ||||||||||||| | ||||||||| |||||||||||||    
T  7779691 aatcgggtatggggacggggaaggtaaaacccgtccccacccc 7779649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 111 - 257
Target Start/End: Complemental strand, 38152688 - 38152542
Alignment:
Q  111 gggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatata 210  Q
    |||| ||||||||||||||||||||| ||| | | ||||| |  |||| ||||| |||||||||||| | |  ||| || ||||||||| ||||| ||||    
T  38152688 gggacggggatggggcggggatacccaaacccatcggggacggggatgggattcaatttctcatccccgttgagtatgggtagggtaacgggtaagtata 38152589  T
Q  211 tgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    || || | | ||||||| ||| | ||||||||| |||||||||||||    
T  38152588 tgagaatcgagtatgggaacggggaaggtaaaacccgtccccacccc 38152542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 116 - 257
Target Start/End: Complemental strand, 25905411 - 25905270
Alignment:
Q  116 ggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatggga 215  Q
    |||||||||| |||||||||||||  ||| ||||| |  |||||||||| ||||||||||| || | |||| || |||||||||  |||| |||||| ||    
T  25905411 ggggatggggaggggatacccgaatccgtcggggacggggatgagattcaatttctcatccttgttgggtatgggtagggtaacgagtaagtatatgaga 25905312  T
Q  216 gttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
     |  |||||||  ||| | ||||||||| |||||||||||||    
T  25905311 atcaggtatggaaacggggaaggtaaaacccgtccccacccc 25905270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 109 - 250
Target Start/End: Original strand, 46127466 - 46127607
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaata 208  Q
    |||||| |||||||||||||| ||||| |||| | | |||||||  |||||| ||| |||||||||||| | |   |  |||||||||||||||||| ||    
T  46127466 cggggacggggatggggcgggaatacctgaacccatcggggatggggatgaggttcaatttctcatccccgttgaatgtggatagggtaacaggtaagta 46127565  T
Q  209 tatgggagttgggtatggggacgagaaaggtaaaatccgtcc 250  Q
    |||| || |||||||||| || | | || |||||||||||||    
T  46127566 tatgagaattgggtatggagatggggaatgtaaaatccgtcc 46127607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 272 - 316
Target Start/End: Original strand, 6467765 - 6467809
Alignment:
Q  272 cctaaacaccctttttcaagggaaaaacagttcggtttatataat 316  Q
    ||||||||||||||||||||||||||||||||||| |||||||||    
T  6467765 cctaaacaccctttttcaagggaaaaacagttcggattatataat 6467809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 109 - 252
Target Start/End: Complemental strand, 4101262 - 4101120
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaata 208  Q
    ||||||||| ||||||||||| |||||||||| ||| |||||| | |||||||||| |||| ||||||| | | |||| |  ||| ||||  |||||  |    
T  4101262 cggggatggagatggggcgggcatacccgaacccgtcggggat-aggatgagattcgatttttcatccccgttgggtatgagtagagtaatgggtaagga 4101164  T
Q  209 tatgggagttgggtatggggacgagaaaggtaaaatccgtcccc 252  Q
    |||| |||| ||||||||||||| | |||||||||  |||||||    
T  4101163 tatgagagtagggtatggggacggggaaggtaaaactcgtcccc 4101120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 126 - 257
Target Start/End: Complemental strand, 17851638 - 17851507
Alignment:
Q  126 cggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttgggtatg 225  Q
    ||||||||||||||| ||| | |||    |||||||||| |||||||||||| | | |||| || ||||||||| ||||| |||||| || | |||||||    
T  17851638 cggggatacccgaacccgtcgaggacagggatgagattcaatttctcatccccgttgggtatgggtagggtaacgggtaagtatatgagaatcgggtatg 17851539  T
Q  226 gggacgagaaaggtaaaatccgtccccacccc 257  Q
    |||||| | |||||||||   |||||||||||    
T  17851538 gggacggggaaggtaaaacttgtccccacccc 17851507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 109 - 243
Target Start/End: Complemental strand, 3156815 - 3156681
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaata 208  Q
    |||||||||||||| ||||||||||||| ||| ||| || ||||  ||||||| || |||||| ||||| |||   || || |||  |||||||||| ||    
T  3156815 cggggatggggatgaggcggggatacccaaacccgtcggagatggggatgagaatcgatttcttatccccgctgaatatgggtagaataacaggtaagta 3156716  T
Q  209 tatgggagttgggtatggggacgagaaaggtaaaa 243  Q
     ||| |||||||||||||| ||| | |||||||||    
T  3156715 catgagagttgggtatgggaacggggaaggtaaaa 3156681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 127 - 257
Target Start/End: Original strand, 38140111 - 38140241
Alignment:
Q  127 ggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttgggtatgg 226  Q
    |||||||||||||| ||| ||||| |  |||||||||| |||||||||||| | | | || || ||||||||| ||||| |||||| ||   || |||||    
T  38140111 ggggatacccgaacccgtcggggacggggatgagattcaatttctcatccccgttggttatgggtagggtaacgggtaagtatatgagaaccggatatgg 38140210  T
Q  227 ggacgagaaaggtaaaatccgtccccacccc 257  Q
    | ||||| |||||||||  ||||||||||||    
T  38140211 gtacgaggaaggtaaaactcgtccccacccc 38140241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 204
Target Start/End: Complemental strand, 17885238 - 17885141
Alignment:
Q  107 tacggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggta 204  Q
    |||||||||||||||| || |||||||||| ||| ||| ||||| |  |||||||||| |||||||||||| | | |||| || ||||||||| ||||    
T  17885238 tacggggatggggatgaggtggggatacccaaacccgtcggggacggggatgagattcaatttctcatccccgttgggtatgggtagggtaacgggta 17885141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 232
Target Start/End: Original strand, 18826176 - 18826296
Alignment:
Q  111 gggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatata 210  Q
    |||| |||||||||||||| |||||| ||| ||| ||||| |  |||| | ||| |||||||||||| | |||||| || ||||||||| ||||| ||||    
T  18826176 gggacggggatggggcggg-atacccaaacccgtcggggacggggatggggttcaatttctcatccccgttaggtatgggtagggtaacgggtaagtata 18826274  T
Q  211 tgggagttgggtatggggacga 232  Q
    || || | ||||||||||||||    
T  18826275 tgagaatcgggtatggggacga 18826296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 104 - 257
Target Start/End: Original strand, 27062582 - 27062735
Alignment:
Q  104 cactacggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggt 203  Q
    |||| |||||| |||||||||||||  |||||||||| | | ||||| |  ||||||||||||||| ||||||| | | | || || |||| ||||  ||    
T  27062582 cacttcggggacggggatggggcggaaatacccgaacccattggggacggggatgagattctatttgtcatccccgttggatatgggtaggataacgagt 27062681  T
Q  204 aaatatatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    || |||||| |||| ||| | ||||| ||| |||| |||| |||||||||||||    
T  27062682 aagtatatgagagtaggggacggggatgaggaaggcaaaacccgtccccacccc 27062735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 257
Target Start/End: Original strand, 5567449 - 5567592
Alignment:
Q  114 atggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgg 213  Q
    ||||||||||||  ||||| ||||||| ||| ||||| |  |||  |||||||||||||||||| | | | || |  ||||||||||||||| ||||||     
T  5567449 atggggatggggaagggatccccgaacccgtcggggacggggataggattctatttctcatccccgttggatatgagtagggtaacaggtaagtatatga 5567548  T
Q  214 gagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    || | ||||||||||||| |  ||||||||  | ||||||||||    
T  5567549 gaatagggtatggggacgggggaggtaaaactcatccccacccc 5567592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 31345341 - 31345274
Alignment:
Q  22 catcatctctttgctggataatgcattacatcattgtgctcggcactaaaaaatacttttatttttat 89  Q
    ||||||||||||| |  ||||||||||||||||||| |||||  | | ||||||||||||||||||||    
T  31345341 catcatctctttgatatataatgcattacatcattgcgctcgagattgaaaaatacttttatttttat 31345274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 211
Target Start/End: Original strand, 39456289 - 39456384
Alignment:
Q  116 ggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatat 211  Q
    |||||||||| |||||||||| ||| ||| ||||| |  ||||| |||| |||||||||||| | | |||| || ||||||||||||||| |||||    
T  39456289 ggggatggggtggggatacccaaacccgtcggggacggggatgaaattcaatttctcatccccgttgggtaggggtagggtaacaggtaagtatat 39456384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 107 - 225
Target Start/End: Complemental strand, 17885024 - 17884906
Alignment:
Q  107 tacggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaa 206  Q
    |||||||||| ||||| || |||||||||| ||| ||| ||||| |  |||||||||| |||||||||||| | |   || || ||||||||| ||||||    
T  17885024 tacggggatgaggatgaggtggggatacccaaacccgtcggggacggggatgagattcaatttctcatccccgttgaatatgggtagggtaacgggtaaa 17884925  T
Q  207 tatatgggagttgggtatg 225  Q
    |||||| || | |||||||    
T  17884924 tatatgagaatcgggtatg 17884906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 229
Target Start/End: Original strand, 29855736 - 29855866
Alignment:
Q  99 ttatccactacggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaa 198  Q
    ||||||| | ||||||||||| || |||||||||||| |||| |||  ||||||| ||||| |||| | |||| ||||  | | |||| |||||||||||    
T  29855736 ttatccattgcggggatgggggtgaggcggggatacctgaacccgtcagggatgaggatgaaattcgacttctgatcctcgttgggtatggatagggtaa 29855835  T
Q  199 caggtaaatatatgggagttgggtatgggga 229  Q
    ||  ||| ||| |||||||  ||||||||||    
T  29855836 caaataagtatttgggagtatggtatgggga 29855866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 257
Target Start/End: Complemental strand, 37181981 - 37181916
Alignment:
Q  191 tagggtaacaggtaaatatatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    ||||||||||| |||||||||| || | || |||||||||| |||| ||||||||||||||||||||    
T  37181981 tagggtaacagataaatatatgagaatcggatatggggacgggaaa-gtaaaatccgtccccacccc 37181916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 107 - 257
Target Start/End: Original strand, 44734660 - 44734810
Alignment:
Q  107 tacggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaa 206  Q
    |||| |||||||||||| ||||||||||| |||| ||| || || | ||||| ||||| |||||||||||  | | |||| || |||| |||| | |||     
T  44734660 tacgaggatggggatggagcggggatacctgaacccgtcggagacggagatgggattcaatttctcatcctcgttgggtatgggtaggataacggataag 44734759  T
Q  207 tatatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    |||||| || | || ||||| |||| | ||| ||||||||||| |||||||    
T  44734760 tatatgagaatcggatatggagacggggaagataaaatccgtcaccacccc 44734810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 243
Target Start/End: Original strand, 23533883 - 23534101
Alignment:
Q  22 catcatctctttgctggataatgcattacatcattgtgctcggcactaaaaaatacttttatttttatcnnnnnnnnttatccactacggggatggggat 121  Q
    |||||||| ||||||||||||||||||||| |||   ||||| | ||   ||||||||||||||||||          |||| ||| || ||||| ||||    
T  23533883 catcatctatttgctggataatgcattacaacatatcgctcgacgctgctaaatacttttatttttataaaaaaa---tatctactgcgcggatgaggat 23533979  T
Q  122 ggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttggg 221  Q
    | ||| ||||||||||||| ||| || || |  |||||||||| |||||||||||| ||| | || || |||||||||  ||||  |||||| ||| |||    
T  23533980 gaggcagggatacccgaacccgtcggagacggggatgagattcgatttctcatccccgctggatatgggtagggtaacgagtaagaatatggaagtaggg 23534079  T
Q  222 tatggggacgagaaaggtaaaa 243  Q
    |||| ||| |  ||||||||||    
T  23534080 tatgaggatggaaaaggtaaaa 23534101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 116 - 229
Target Start/End: Complemental strand, 43218043 - 43217930
Alignment:
Q  116 ggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatggga 215  Q
    ||||||| |||||| |||||||||| | | ||||| | ||||||||||| |||||||||| | | ||| || || |||||||||| |||| ||||||  |    
T  43218043 ggggatgaggcgggaatacccgaacccattggggacggagatgagattcaatttctcatctccgttagatatgggtagggtaacaagtaagtatatgaaa 43217944  T
Q  216 gttgggtatgggga 229  Q
    || ||| |||||||    
T  43217943 gtaggggatgggga 43217930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 253
Target Start/End: Original strand, 27850627 - 27850770
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaata 208  Q
    |||||| ||||||||||||| ||||||| ||| ||| ||||| |  |||| | ||| |||||||||||| | | |||| ||||| |||||| ||||| |     
T  27850627 cggggacggggatggggcggagatacccaaacccgttggggacggggatggggttcaatttctcatccccgttgggtatggata-ggtaacgggtaagtg 27850725  T
Q  209 tatgggagttgggtatggggacgagaaaggtaaaatccgtcccca 253  Q
    |||| || |||||||||| |||| | || ||||||  ||||||||    
T  27850726 tatgagaattgggtatggagacggggaatgtaaaactcgtcccca 27850770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 3773880 - 3773817
Alignment:
Q  26 atctctttgctggataatgcattacatcattgtgctcggcactaaaaaatacttttatttttat 89  Q
    ||||||||||| |||||||||||||| ||||||||||    ||  |||||||||||||||||||    
T  3773880 atctctttgctagataatgcattacaacattgtgctcaaggctgcaaaatacttttatttttat 3773817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 110 - 177
Target Start/End: Complemental strand, 16078802 - 16078735
Alignment:
Q  110 ggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccc 177  Q
    ||||| || |||||||||||||||||||||| ||| |||||||  |||| | ||| ||||||||||||    
T  16078802 ggggacggagatggggcggggatacccgaacccgtcggggatggggatggggttcaatttctcatccc 16078735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 316
Target Start/End: Original strand, 1518776 - 1518818
Alignment:
Q  274 taaacaccctttttcaagggaaaaacagttcggtttatataat 316  Q
    ||||||||| ||| ||||||||||||||||||| |||||||||    
T  1518776 taaacacccgtttgcaagggaaaaacagttcggattatataat 1518818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 257
Target Start/End: Complemental strand, 8265529 - 8265427
Alignment:
Q  155 gatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttgggtatggggacgagaaaggtaaaatccgtccccac 254  Q
    |||||||||| |||||||||||  |||  ||| || ||||||||||||||| |||||  |||| |||||| || | ||  ||| ||||| ||||||||||    
T  8265529 gatgagattcgatttctcatcctcgctgtgtatgggtagggtaacaggtaagtatataagagtagggtataggaaagaagaagataaaacccgtccccac 8265430  T
Q  255 ccc 257  Q
    |||    
T  8265429 ccc 8265427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 257
Target Start/End: Original strand, 10996236 - 10996298
Alignment:
Q  195 gtaacaggtaaatatatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    ||||||||||| |||||| || | ||||||||||| | | ||||||||| |||||||||||||    
T  10996236 gtaacaggtaagtatatgagaatagggtatggggatggggaaggtaaaacccgtccccacccc 10996298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 257
Target Start/End: Original strand, 42908400 - 42908502
Alignment:
Q  155 gatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttgggtatggggacgagaaaggtaaaatccgtccccac 254  Q
    |||| ||||| ||||||||||||   | |||| || ||||||||| ||||| ||||||| ||| ||| ||||||| | | |||| |||| ||||||||||    
T  42908400 gatgggattcaatttctcatcccctttgggtatgggtagggtaacgggtaagtatatggaagtaggggatggggatggggaaggcaaaacccgtccccac 42908499  T
Q  255 ccc 257  Q
    |||    
T  42908500 ccc 42908502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 212
Target Start/End: Original strand, 2632274 - 2632374
Alignment:
Q  111 gggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatata 210  Q
    |||| |||||||||||||||||||||||||  || || || |  |||||| ||| |||||||||||| | | |||| || ||||||||| ||||| ||||    
T  2632274 gggacggggatggggcggggatacccgaacctgtcggagacggggatgaggttcaatttctcatccccgttgggtatgg-tagggtaacgggtaagtata 2632372  T
Q  211 tg 212  Q
    ||    
T  2632373 tg 2632374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 5432255 - 5432312
Alignment:
Q  24 tcatctctttgctggataatgcattacatcattgtgctcggcactaaaaaatactttt 81  Q
    |||||||||||| ||||||||||||||| ||||| | ||||  || ||||||||||||    
T  5432255 tcatctctttgcaggataatgcattacaacattgagttcggggctgaaaaatactttt 5432312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 315
Target Start/End: Complemental strand, 36946381 - 36946340
Alignment:
Q  274 taaacaccctttttcaagggaaaaacagttcggtttatataa 315  Q
    |||||||| |||||||||||||||||| ||||| ||||||||    
T  36946381 taaacaccttttttcaagggaaaaacaattcggattatataa 36946340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 316
Target Start/End: Complemental strand, 28230559 - 28230516
Alignment:
Q  272 cctaaacaccctttttcaagggaaaaacagttcggtttatataat 316  Q
    ||||||||||||||||||| || |||||||||||| |||||||||    
T  28230559 cctaaacaccctttttcaa-ggtaaaacagttcggattatataat 28230516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 318
Target Start/End: Complemental strand, 31985607 - 31985563
Alignment:
Q  274 taaacaccctttttcaagggaaaaacagttcggtttatataattc 318  Q
    |||||||| |||||||||||  ||||||||||| |||||||||||    
T  31985607 taaacaccatttttcaagggggaaacagttcggattatataattc 31985563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 211
Target Start/End: Complemental strand, 45379873 - 45379817
Alignment:
Q  155 gatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatat 211  Q
    |||||||||| |||||||||||| | ||| || || ||||||||||| |||||||||    
T  45379873 gatgagattcaatttctcatccccgttagatatgggtagggtaacagataaatatat 45379817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 316
Target Start/End: Complemental strand, 48706087 - 48706047
Alignment:
Q  276 aacaccctttttcaagggaaaaacagttcggtttatataat 316  Q
    ||||||||| |||||||| |||||| |||||||||||||||    
T  48706087 aacacccttattcaaggggaaaacaattcggtttatataat 48706047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 7e-31; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 109 - 257
Target Start/End: Complemental strand, 13830521 - 13830373
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaata 208  Q
    |||||||||||||||||||||||||||||||| ||| ||||| |  |||| ||||| |||||||||||| | | |||| || |||||||| |||||| ||    
T  13830521 cggggatggggatggggcggggatacccgaacccgtcggggacggggatgtgattcaatttctcatccccgttgggtatgggtagggtaataggtaagta 13830422  T
Q  209 tatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    |||| || | ||||||||||||| | ||||||||| |||||||||||||    
T  13830421 tatgagaatcgggtatggggacggggaaggtaaaacccgtccccacccc 13830373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 107 - 257
Target Start/End: Original strand, 7314951 - 7315101
Alignment:
Q  107 tacggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaa 206  Q
    |||||||||||| |||||| |||||||||||||| ||| ||||| |  |||| ||||| |||||||||||| ||| | || ||  |||||||| |||||     
T  7314951 tacggggatgggaatggggtggggatacccgaacccgtcggggacggggatgtgattcaatttctcatccccgctggatatgggcagggtaacgggtaag 7315050  T
Q  207 tatatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    |||||| || | ||||||||||||| | ||||||||| |||||||||||||    
T  7315051 tatatgagaatcgggtatggggacggggaaggtaaaacccgtccccacccc 7315101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 110 - 256
Target Start/End: Original strand, 37473034 - 37473180
Alignment:
Q  110 ggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatat 209  Q
    |||||||||||||| | |||||||||||||| ||| |||||||  |||||||||| |||||||||||| | | |||| || ||||||||||||||| |||    
T  37473034 ggggatggggatggagtggggatacccgaacccgtcggggatggggatgagattcaatttctcatccccgttgggtatgggtagggtaacaggtaagtat 37473133  T
Q  210 atgggagttgggtatggggacgagaaaggtaaaatccgtccccaccc 256  Q
    |||  | |  ||||| |||||| | ||||||||| ||| ||||||||    
T  37473134 atgaaaatcaggtatagggacggggaaggtaaaacccgaccccaccc 37473180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 116 - 253
Target Start/End: Complemental strand, 30846723 - 30846586
Alignment:
Q  116 ggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatggga 215  Q
    ||||||||||||||||||||||||| ||| ||||| |  |||| ||||| |||||||||||| | | |||| || ||||||||| | ||| |||||| ||    
T  30846723 ggggatggggcggggatacccgaacccgtcggggacggggatgggattcaatttctcatccccgttgggtatgggtagggtaacggctaagtatatgaga 30846624  T
Q  216 gttgggtatggggacgagaaaggtaaaatccgtcccca 253  Q
     | ||||||||||||| | |||||||||| ||||||||    
T  30846623 atcgggtatggggacggggaaggtaaaattcgtcccca 30846586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 116 - 257
Target Start/End: Original strand, 36128418 - 36128559
Alignment:
Q  116 ggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatggga 215  Q
    |||||||||||||||||||| |||| ||| ||||| |  |||||||||| |||| ||||||| | | |||| || ||||||||| ||||| |||||| ||    
T  36128418 ggggatggggcggggatacctgaacccgtcggggacggggatgagattcaatttttcatccccgttgggtatgggtagggtaacgggtaagtatatgaga 36128517  T
Q  216 gttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
     | || |||||||||| | ||||||||| |||||||||||||    
T  36128518 atcggatatggggacggggaaggtaaaacccgtccccacccc 36128559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 109 - 257
Target Start/End: Original strand, 10208733 - 10208881
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaata 208  Q
    |||||| | ||||||||||||||||||||||| ||| ||||| |  |||||||||| |||||||||||| | | | || || ||||||||| ||||| ||    
T  10208733 cggggaagaggatggggcggggatacccgaacccgtcggggacggggatgagattcaatttctcatccccgttggatatgggtagggtaacgggtaagta 10208832  T
Q  209 tatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    |||| || | ||||||| | ||| | ||||||||| |||||||||||||    
T  10208833 tatgagaatcgggtatgagaacggggaaggtaaaacccgtccccacccc 10208881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 109 - 257
Target Start/End: Original strand, 24414435 - 24414583
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaata 208  Q
    |||||| ||||||||||||||||||||||||| ||| ||||| |  |||| ||||| |||||||||||| | | |||| || ||||||||| ||||| |     
T  24414435 cggggacggggatggggcggggatacccgaacccgtcggggacggggatgggattcaatttctcatccccgttgggtatgggtagggtaacgggtaagtg 24414534  T
Q  209 tatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    |||| || | ||||||| ||||| | |||||||||  ||||||||||||    
T  24414535 tatgagaatagggtatgtggacggggaaggtaaaactcgtccccacccc 24414583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 116 - 257
Target Start/End: Complemental strand, 37999263 - 37999123
Alignment:
Q  116 ggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatggga 215  Q
    ||||||||||||||||||||||||| ||| || || |  |||||||||| |||||||||||| | | | ||||| ||||||||| ||||| |||||| ||    
T  37999263 ggggatggggcggggatacccgaacccgtcggagacggggatgagattcaatttctcatccccgttggatacgggtagggtaacgggtaattatatgaga 37999164  T
Q  216 gttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
     | | ||||||||||| | ||||||||| ||||| |||||||    
T  37999163 atcgagtatggggacggggaaggtaaaa-ccgtctccacccc 37999123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 126 - 257
Target Start/End: Complemental strand, 9632166 - 9632035
Alignment:
Q  126 cggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttgggtatg 225  Q
    ||||||||||||||| ||| ||||| |  |||||||||| |||||||||||| | | |||| || ||||||||| ||||| |||||  || | |||||||    
T  9632166 cggggatacccgaacccgttggggacggggatgagattcaatttctcatccccgttgggtatgggtagggtaacgggtaagtatataagaatcgggtatg 9632067  T
Q  226 gggacgagaaaggtaaaatccgtccccacccc 257  Q
    || ||| | ||||||||| |||||||||||||    
T  9632066 ggaacggggaaggtaaaacccgtccccacccc 9632035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 116 - 250
Target Start/End: Complemental strand, 37106484 - 37106350
Alignment:
Q  116 ggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatggga 215  Q
    |||||||||| |||||||||||||| |||  |||| |  |||||||||| |||||||||||  | | |||| ||||||| |||  | |||||||||| ||    
T  37106484 ggggatggggtggggatacccgaacccgtcagggacggggatgagattcaatttctcatcctcgttgggtatggataggctaatggataaatatatgaga 37106385  T
Q  216 gttgggtatggggacgagaaaggtaaaatccgtcc 250  Q
     | ||||||||||||||| ||||||||| ||||||    
T  37106384 atcgggtatggggacgaggaaggtaaaacccgtcc 37106350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 112 - 253
Target Start/End: Complemental strand, 42995563 - 42995423
Alignment:
Q  112 ggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatat 211  Q
    ||||||||||| |||||| |||||||||| |||  ||||||| |||||||||| || ||||||||||| | |||| || || |||||||| ||||||| |    
T  42995563 ggatggggatgtggcgggaatacccgaacccgttagggatgaggatgagattcaatctctcatccctgttgggtatgggtaaggtaacagataaatattt 42995464  T
Q  212 gggagttgggtatggggacgagaaaggtaaaatccgtcccca 253  Q
    | ||| ||| |||||||| | | ||||||||||  |||||||    
T  42995463 gagag-tggatatggggatggggaaggtaaaattagtcccca 42995423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 118 - 271
Target Start/End: Original strand, 6028201 - 6028358
Alignment:
Q  118 ggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagt 217  Q
    ||||||||||||||||||||||| ||| ||||| |  |||| | ||| |||||||||||||| | | ||  | |||||||||||||||  ||||  || |    
T  6028201 ggatggggcggggatacccgaacccgtcggggacggggatggggttcaatttctcatccctgttggatattggtagggtaacaggtaaggatataagaat 6028300  T
Q  218 tgggtatggggacgagaaaggtaaaatccgtccccac----ccccaatgccatgccta 271  Q
     ||||||||||||| | || |||||| ||||||||||    |||||||||||||||||    
T  6028301 cgggtatggggacggggaatgtaaaacccgtccccaccccgccccaatgccatgccta 6028358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 109 - 257
Target Start/End: Complemental strand, 45256609 - 45256461
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaata 208  Q
    |||||| |||||||||| |||||||||| ||| | | ||||| |  |||||||||| |||||||||||| | ||| ||  | ||||||||| | ||||||    
T  45256609 cggggacggggatggggtggggatacccaaacccatcggggacggggatgagattcaatttctcatccccgttagatataggtagggtaacggataaata 45256510  T
Q  209 tatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    |||| || |||| ||||||||||   || |||||||||||| |||||||    
T  45256509 tatgagaattggatatggggacggagaatgtaaaatccgtctccacccc 45256461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 22 - 257
Target Start/End: Complemental strand, 13954558 - 13954323
Alignment:
Q  22 catcatctctttgctggataatgcattacatcattgtgctcggcactaaaaaatacttttatttttatcnnnnnnnnttatccactacggggatggggat 121  Q
    ||||||||| |||||||||||||||||||| | ||| ||||||  ||  |||  |||||||||||||||         ||||||    || |||||||||    
T  13954558 catcatctcattgctggataatgcattacaactttgcgctcggggctgcaaagaacttttatttttatcaaagaaaaatatccatcgtggagatggggat 13954459  T
Q  122 ggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttggg 221  Q
    |||| ||| | |||||||  |||  |||| | ||||||||||| |||||| ||||| ||| |||| || |||| ||||  |||| |||||| ||||  |     
T  13954458 ggggagggaaaacccgaatccgtcagggacggagatgagattcgatttcttatccccgctgggtatgggtaggataacgagtaagtatatgagagtatga 13954359  T
Q  222 tatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    |||||||||||| ||||||||| || ||||||||||    
T  13954358 tatggggacgaggaaggtaaaacccatccccacccc 13954323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 22 - 257
Target Start/End: Complemental strand, 14095765 - 14095530
Alignment:
Q  22 catcatctctttgctggataatgcattacatcattgtgctcggcactaaaaaatacttttatttttatcnnnnnnnnttatccactacggggatggggat 121  Q
    ||||||||| |||||||||||||||||||| | ||| ||||||  ||  |||  |||||||||||||||         ||||||    || |||||||||    
T  14095765 catcatctcattgctggataatgcattacaactttgcgctcggggctgcaaagaacttttatttttatcaaagaaaaatatccatcgtggagatggggat 14095666  T
Q  122 ggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttggg 221  Q
    |||| ||| | |||||||  |||  |||| | ||||||||||| |||||| ||||| ||| |||| || |||| ||||  |||| |||||| ||||  |     
T  14095665 ggggagggaaaacccgaatccgtcagggacggagatgagattcgatttcttatccccgctgggtatgggtaggataacgagtaagtatatgagagtatga 14095566  T
Q  222 tatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    |||||||||||| ||||||||| || ||||||||||    
T  14095565 tatggggacgaggaaggtaaaacccatccccacccc 14095530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 99 - 257
Target Start/End: Original strand, 35248735 - 35248892
Alignment:
Q  99 ttatccactacggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaa 198  Q
    ||||||| | |||| ||||||||| || ||| ||| || ||| ||| ||||| | ||||||||||| |||||| ||||| | | | || || ||||||||    
T  35248735 ttatccatttcgggaatggggatgaggtgggtatatccaaac-cgtcggggacggagatgagattcgatttcttatccccgttggatatgggtagggtaa 35248833  T
Q  199 caggtaaatatatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
      ||||| ||| |||||||  |||||||||||| | |||||||||||||||||||||||    
T  35248834 tgggtaagtatttgggagtaaggtatggggacggggaaggtaaaatccgtccccacccc 35248892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 24 - 89
Target Start/End: Original strand, 34544592 - 34544657
Alignment:
Q  24 tcatctctttgctggataatgcattacatcattgtgctcggcactaaaaaatacttttatttttat 89  Q
    ||||||||||| |||||||||||||||| ||||| ||||||  || ||||||||||||||||||||    
T  34544592 tcatctctttgttggataatgcattacaacattgcgctcggggctgaaaaatacttttatttttat 34544657  T

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Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 109 - 177
Target Start/End: Complemental strand, 45115366 - 45115298
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccc 177  Q
    |||||||||||||| ||||||||||||||||| ||| |||||||  |||||||||| ||||||| ||||    
T  45115366 cggggatggggatgaggcggggatacccgaacccgtcggggatggggatgagattcaatttctcgtccc 45115298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 231
Target Start/End: Complemental strand, 26755512 - 26755397
Alignment:
Q  116 ggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatggga 215  Q
    |||||||||||||| ||||||||| |  | ||||| |  |||||||||| |||||||||||| | | |||| || ||||||||  ||||| |||||||||    
T  26755512 ggggatggggcgggaatacccgaattgattggggacggggatgagattcaatttctcatccccgttgggtatgggtagggtaatgggtaagtatatggga 26755413  T
Q  216 gttgggtatggggacg 231  Q
    || ||| |||||||||    
T  26755412 gtaggggatggggacg 26755397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 116 - 254
Target Start/End: Complemental strand, 3546919 - 3546781
Alignment:
Q  116 ggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatggga 215  Q
    |||||||| ||||| |||||  ||| | | |||||||  |||||||||| |||||||||||| | ||| || |||||||||||  ||||| |||||| ||    
T  3546919 ggggatggagcgggaataccataacccattggggatggggatgagattcaatttctcatccccgttagctatggatagggtaaggggtaagtatatgaga 3546820  T
Q  216 gttgggtatggggacgagaaaggtaaaatccgtccccac 254  Q
    || ||| ||||||| | | |||| |||| ||||||||||    
T  3546819 gtaggggatggggatggggaaggcaaaacccgtccccac 3546781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 225
Target Start/End: Original strand, 29657014 - 29657214
Alignment:
Q  22 catcatctctttgctggataatgcattacatcattgtgctcggcactaaaaaatacttttatttttatcnnnnnnnn--ttatccactacggggatgggg 119  Q
    |||||||||||| ||||||||||||||||| ||||| ||||||  || |||||||||||  |||||||           |||||||| ||||||     |    
T  29657014 catcatctctttcctggataatgcattacaacattgcgctcggggctgaaaaatactttagtttttattttaaaaaaaattatccacaacgggg-----g 29657108  T
Q  120 atggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttg 219  Q
    |||||||||| |||||||||| ||| ||||  |  |||||||||| |||||||||||| | |||||| ||  |||||||||  ||| |||||| |||| |    
T  29657109 atggggcgggtatacccgaacccgtcgggggcggggatgagattcaatttctcatccccgttaggtatgggcagggtaacaaataagtatatgagagtag 29657208  T
Q  220 ggtatg 225  Q
    ||||||    
T  29657209 ggtatg 29657214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 257
Target Start/End: Original strand, 11009090 - 11009187
Alignment:
Q  160 gattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    ||||| |||||||||||||| | |||| || |||||||||  |||| |||||| || | ||||||||||||| | ||| ||||| |||||||||||||    
T  11009090 gattcaatttctcatccctgttgggtatgggtagggtaacgtgtaagtatatgagaatcgggtatggggacggggaagataaaacccgtccccacccc 11009187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 212
Target Start/End: Original strand, 8916247 - 8916342
Alignment:
Q  117 gggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatg 212  Q
    ||||||| |||||||||||||||| ||| ||||| |  |||||||||| |||||||||||  | | |||| || ||||||||| ||||| ||||||    
T  8916247 gggatggagcggggatacccgaacccgtcggggacggggatgagattcaatttctcatcctcgttgggtatgggtagggtaacgggtaagtatatg 8916342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 89
Target Start/End: Original strand, 34214934 - 34215001
Alignment:
Q  22 catcatctctttgctggataatgcattacatcattgtgctcggcactaaaaaatacttttatttttat 89  Q
    |||||||||||||||||||||||||||||| ||||| | ||   ||| ||||||||||||||| ||||    
T  34214934 catcatctctttgctggataatgcattacaacattgcgttcaagactgaaaaatacttttattattat 34215001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 160 - 257
Target Start/End: Original strand, 31942509 - 31942606
Alignment:
Q  160 gattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    ||||| |||||||||||| | | |||| || ||||||||| ||||| ||||||  | | ||||||||||||| | || |||||| |||||||||||||    
T  31942509 gattcaatttctcatccccgttgggtatgggtagggtaacgggtaagtatatgataatcgggtatggggacggggaatgtaaaacccgtccccacccc 31942606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 316
Target Start/End: Complemental strand, 27900719 - 27900675
Alignment:
Q  272 cctaaacaccctttttcaagggaaaaacagttcggtttatataat 316  Q
    ||||||||||||| |||| |||||||||||||||| |||||||||    
T  27900719 cctaaacacccttcttcaggggaaaaacagttcggattatataat 27900675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 89
Target Start/End: Original strand, 31601044 - 31601112
Alignment:
Q  22 catcatctctttgctggataatgcattacatcattgtgctcggcact-aaaaaatacttttatttttat 89  Q
    ||||||||||||| |||||||||||||||| ||||   |||||  || |||||||||||||||||||||    
T  31601044 catcatctctttgttggataatgcattacaacattacactcggagctaaaaaaatacttttatttttat 31601112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 37786951 - 37786991
Alignment:
Q  20 gacatcatctctttgctggataatgcattacatcattgtgc 60  Q
    |||||||||||||||||| ||||||||||||| ||||||||    
T  37786951 gacatcatctctttgctgaataatgcattacaacattgtgc 37786991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 259
Target Start/End: Original strand, 40734982 - 40735049
Alignment:
Q  191 tagggtaacaggtaaatatatgggagttgggtatggggacgagaaaggtaaaatccgtccccaccccca 259  Q
    |||| |||||| |||||||||| |||   |||||| |||||||||||||||||||| ||||||||||||    
T  40734982 taggataacagataaatatatgagagaatggtatgaggacgagaaaggtaaaatcc-tccccaccccca 40735049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 257
Target Start/End: Complemental strand, 10920402 - 10920300
Alignment:
Q  155 gatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttgggtatggggacgagaaaggtaaaatccgtccccac 254  Q
    |||| ||||| |||||||||||| | | | || || ||||||||||||||| |||||| || | |||||||| || | | ||| ||||| ||||||||||    
T  10920402 gatgggattcaatttctcatccccgttggatatgggtagggtaacaggtaagtatatgagaatagggtatggagatggggaagataaaacccgtccccac 10920303  T
Q  255 ccc 257  Q
    |||    
T  10920302 ccc 10920300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 253
Target Start/End: Complemental strand, 14331282 - 14331184
Alignment:
Q  155 gatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttgggtatggggacgagaaaggtaaaatccgtcccca 253  Q
    |||||||||| |||| |||| || | |||||| || ||| |||||  | |||||||||||||| ||| ||||||| | | |||| ||||||||||||||    
T  14331282 gatgagattcaatttttcattcccgttaggtatgggtagtgtaacgaggaaatatatgggagtaggggatggggatggggaaggcaaaatccgtcccca 14331184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 257
Target Start/End: Complemental strand, 15546397 - 15546331
Alignment:
Q  191 tagggtaacaggtaaatatatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    ||||||||| ||||| |||||| || | ||||||||||| | | ||||||||| |||||||||||||    
T  15546397 tagggtaacgggtaagtatatgagaatagggtatggggatggggaaggtaaaacccgtccccacccc 15546331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 316
Target Start/End: Original strand, 34517170 - 34517212
Alignment:
Q  274 taaacaccctttttcaagggaaaaacagttcggtttatataat 316  Q
    |||||||| ||||||||||||||||||||| || |||||||||    
T  34517170 taaacaccatttttcaagggaaaaacagtttggattatataat 34517212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Original strand, 16227075 - 16227140
Alignment:
Q  191 tagggtaacaggtaaatatatgggagttgggtatggggacgagaaaggtaaaatccgtccccaccc 256  Q
    |||||||||| |||| |||||| || | ||||||||||||| | || |||||| ||||||||||||    
T  16227075 tagggtaacatgtaagtatatgagaatcgggtatggggacggggaatgtaaaacccgtccccaccc 16227140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 317
Target Start/End: Complemental strand, 41854985 - 41854941
Alignment:
Q  272 cctaaacaccctttttcaagggaaaaacagttcggtttatataatt 317  Q
    ||||||||||||||||||| || |||||||||||| ||||||||||    
T  41854985 cctaaacaccctttttcaa-ggtaaaacagttcggattatataatt 41854941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 212
Target Start/End: Complemental strand, 12341592 - 12341496
Alignment:
Q  116 ggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatg 212  Q
    ||||||||||||||||||||| ||| ||| ||||| |  |||||||||  ||||||||| || | | |||| ||  |||||||||| ||| ||||||    
T  12341592 ggggatggggcggggatacccaaacccgtcggggacggggatgagatttaatttctcattcccgttgggtatgggcagggtaacagataagtatatg 12341496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 176
Target Start/End: Complemental strand, 16105402 - 16105342
Alignment:
Q  116 ggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatcc 176  Q
    ||||||||||| ||||||||||||| ||| ||| | |  |||||||||| |||||||||||    
T  16105402 ggggatggggcagggatacccgaacccgtcgggaacggggatgagattcaatttctcatcc 16105342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 254
Target Start/End: Original strand, 18106399 - 18106527
Alignment:
Q  126 cggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttgggtatg 225  Q
    ||||||||||||||  ||| || || |  |||||||||  | |||||||||| | | | || || ||||||||||||||| |||| | || | |||||||    
T  18106399 cggggatacccgaatccgtcggagacggggatgagatttaacttctcatccccgttggatatgggtagggtaacaggtaagtatacgagaatcgggtatg 18106498  T
Q  226 gggacgagaaaggtaaaatccgtccccac 254  Q
    |||||| | ||| ||||| ||||||||||    
T  18106499 gggacggggaagataaaacccgtccccac 18106527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 316
Target Start/End: Complemental strand, 33452529 - 33452486
Alignment:
Q  272 cctaaacaccctttttcaagggaaaaacagttcggtttatataat 316  Q
    ||||||||||||||||||| || |||||||||||| |||||||||    
T  33452529 cctaaacaccctttttcaa-ggtaaaacagttcggattatataat 33452486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 258
Target Start/End: Original strand, 34544708 - 34544819
Alignment:
Q  146 ggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttgggtatggggacgagaaaggtaaaatc 245  Q
    |||||||  |||||||||| ||| |||||||| | |||||| || || || ||||| ||| |||||||||||  |||||| ||||| |  ||||||||      
T  34544708 ggggatggtgatgagattcgattcctcatccccgttaggtatgg-taaggcaacagataagtatatgggagtatggtatgtggacgggggaggtaaaact 34544806  T
Q  246 cgtccccaccccc 258  Q
    |||||||||||||    
T  34544807 cgtccccaccccc 34544819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 316
Target Start/End: Complemental strand, 44465813 - 44465770
Alignment:
Q  272 cctaaacaccctttttcaagggaaaaacagttcggtttatataat 316  Q
    ||||||||||||||||||| || |||||||||||| |||||||||    
T  44465813 cctaaacaccctttttcaa-ggtaaaacagttcggattatataat 44465770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 2e-28; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 109 - 257
Target Start/End: Original strand, 10188377 - 10188525
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaata 208  Q
    |||||| ||||||||||||||||||||||||||||| ||||| |  |||| ||||| |||||||||||| | | |||| || ||||||||||||||| ||    
T  10188377 cggggacggggatggggcggggatacccgaactcgtcggggacggggatgggattcaatttctcatccccgttgggtatgggtagggtaacaggtaagta 10188476  T
Q  209 tatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    |||| || | ||||||||||| | | |||||||||  ||||||||||||    
T  10188477 tatgagaatcgggtatggggatggggaaggtaaaactcgtccccacccc 10188525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 109 - 257
Target Start/End: Complemental strand, 2367111 - 2366963
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaata 208  Q
    |||||| ||||||||||||||||||||||||| ||| ||||| |  |||||||||| |||||||||||| | | |||| |  |||||||||| |||| ||    
T  2367111 cggggacggggatggggcggggatacccgaacccgtcggggacggggatgagattcaatttctcatccccgttgggtatgagtagggtaacatgtaagta 2367012  T
Q  209 tatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    |||| || | || |||||||| ||| ||||||||| |||||||||||||    
T  2367011 tatgagaatcggatatggggatgaggaaggtaaaacccgtccccacccc 2366963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 109 - 257
Target Start/End: Original strand, 3484226 - 3484374
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaata 208  Q
    |||||| ||||||||||||||||||||||||| ||| ||||| |  |||| ||||| |||||||||||| | | |||| || ||||||||| ||||| ||    
T  3484226 cggggacggggatggggcggggatacccgaacccgtcggggacggggatgggattcaatttctcatccccgttgggtatgggtagggtaacgggtaagta 3484325  T
Q  209 tatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    |||| || | |||||| |||||| | ||||||||| |||||||||||||    
T  3484326 tatgagaatcgggtatagggacggggaaggtaaaacccgtccccacccc 3484374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 109 - 257
Target Start/End: Complemental strand, 32853629 - 32853481
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaata 208  Q
    |||||| ||||||||||||||||||||||||| ||| |||||||  |||||||||| |||||||||||| | | |||| || ||||||||| ||||| ||    
T  32853629 cggggacggggatggggcggggatacccgaacccgtcggggatggggatgagattcaatttctcatccccgttgggtatgggtagggtaactggtaagta 32853530  T
Q  209 tatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    ||||  | | ||||||||||| | | ||||||||| ||||| |||||||    
T  32853529 tatgataatcgggtatggggatggggaaggtaaaacccgtctccacccc 32853481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 99 - 230
Target Start/End: Complemental strand, 29340567 - 29340436
Alignment:
Q  99 ttatccactacggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaa 198  Q
    ||||||| | ||| ||| ||||||||||||||| |||||||| ||| ||||| |  |||||||||| |||||||||||  |||||||| |  ||||||||    
T  29340567 ttatccattgcggtgatagggatggggcggggagacccgaacccgtcggggaaggggatgagattcgatttctcatccacgctaggtatgagtagggtaa 29340468  T
Q  199 caggtaaatatatgggagttgggtatggggac 230  Q
    || |||| ||||||||||| ||||||||||||    
T  29340467 caagtaactatatgggagtagggtatggggac 29340436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 99 - 230
Target Start/End: Original strand, 29342352 - 29342483
Alignment:
Q  99 ttatccactacggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaa 198  Q
    ||||||| | ||| ||| ||||||||||||||| |||||||| ||| ||||| |  |||||||||| |||||||||||  |||||||| |  ||||||||    
T  29342352 ttatccattgcggtgatagggatggggcggggagacccgaacccgtcggggaaggggatgagattcgatttctcatccacgctaggtatgagtagggtaa 29342451  T
Q  199 caggtaaatatatgggagttgggtatggggac 230  Q
    || |||| ||||||||||| ||||||||||||    
T  29342452 caagtaactatatgggagtagggtatggggac 29342483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 126 - 257
Target Start/End: Original strand, 5863692 - 5863823
Alignment:
Q  126 cggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttgggtatg 225  Q
    ||||||||||||||| ||| ||||| |  |||||||||| |||||||||||| | | |||| || ||||||||| ||||| |||||| || |  ||||||    
T  5863692 cggggatacccgaacccgtcggggacggggatgagattcaatttctcatccccgttgggtatgggtagggtaacgggtaagtatatgagaatcaggtatg 5863791  T
Q  226 gggacgagaaaggtaaaatccgtccccacccc 257  Q
    |||||| | ||||||||| |||||||||||||    
T  5863792 gggacggggaaggtaaaacccgtccccacccc 5863823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 126 - 257
Target Start/End: Complemental strand, 27534463 - 27534332
Alignment:
Q  126 cggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttgggtatg 225  Q
    ||||||||||||||| ||| ||||| |  |||| ||||| |||||||||||| | | |||| || ||||||||| | ||| |||||| || | |||||||    
T  27534463 cggggatacccgaacccgtcggggacggggatgtgattcaatttctcatccccgttgggtatgggtagggtaacggttaagtatatgagaatcgggtatg 27534364  T
Q  226 gggacgagaaaggtaaaatccgtccccacccc 257  Q
    |||||| | ||||||||| |||||||||||||    
T  27534363 gggacggggaaggtaaaacccgtccccacccc 27534332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 107 - 257
Target Start/End: Complemental strand, 9442436 - 9442286
Alignment:
Q  107 tacggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaa 206  Q
    ||||||||||||||||||| ||| |||||||||| ||| | ||| |   ||||||||| |||||||||||| | | | || || || |||||| |||||     
T  9442436 tacggggatggggatggggtgggtatacccgaacccgtcgaggacgggaatgagattcaatttctcatccccgttggatatgggtaaggtaacgggtaag 9442337  T
Q  207 tatatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    |||||| || | |||||||| |||| | ||||||||| |||||||||||||    
T  9442336 tatatgagaatcgggtatggagacggggaaggtaaaacccgtccccacccc 9442286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 22 - 257
Target Start/End: Complemental strand, 9402415 - 9402180
Alignment:
Q  22 catcatctctttgctggataatgcattacatcattgtgctcggcactaaaaaatacttttatttttatcnnnnnnnnttatccactacggggatggggat 121  Q
    |||||||||||| || |||||||||||||| |||||  || ||   | ||||||||||||||||||||         || | |||||| ||||||  |||    
T  9402415 catcatctctttactagataatgcattacaacattgcacttggggatgaaaaatacttttatttttattagaaaaaattgttcactacagggatgaagat 9402316  T
Q  122 ggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttggg 221  Q
    |||||||| ||||| |||| |   ||||| |  |||||||||| |||||||||| | ||| | || || ||||||||| ||||| ||| | ||||| |||    
T  9402315 ggggcgggtataccagaacccaacggggacggggatgagattcgatttctcatctccgctggatatgggtagggtaacgggtaagtatttaggagtaggg 9402216  T
Q  222 tatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    ||||||||||   ||||||||| || ||||||||||    
T  9402215 tatggggacggagaaggtaaaaaccatccccacccc 9402180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 126 - 257
Target Start/End: Complemental strand, 12141165 - 12141034
Alignment:
Q  126 cggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttgggtatg 225  Q
    ||||||||||| ||| ||| ||||| |  |||||||||| |||||||||||| | | |||| || ||| ||||| ||||| |||||| || | |||||||    
T  12141165 cggggatacccaaacccgtcggggacggcgatgagattcaatttctcatccccgttgggtatgggtagagtaacgggtaagtatatgagaatcgggtatg 12141066  T
Q  226 gggacgagaaaggtaaaatccgtccccacccc 257  Q
    |||||| | |||||||||  ||||||||||||    
T  12141065 gggacggggaaggtaaaactcgtccccacccc 12141034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 257
Target Start/End: Complemental strand, 9458437 - 9458335
Alignment:
Q  155 gatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttgggtatggggacgagaaaggtaaaatccgtccccac 254  Q
    |||||||||| |||||||||||| | | |||| || ||||||||| ||||| ||||||||||| ||| ||||||| | | |||| |||| ||||||||||    
T  9458437 gatgagattcaatttctcatccccgttgggtatgggtagggtaacgggtaagtatatgggagtaggggatggggatggggaaggaaaaacccgtccccac 9458338  T
Q  255 ccc 257  Q
    |||    
T  9458337 ccc 9458335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 109 - 217
Target Start/End: Complemental strand, 18908656 - 18908548
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaata 208  Q
    |||||| |||||||||||||| |||||| ||| | | | |||||  ||||||||||  |||||||||||   |||||| || ||||||||||||||||||    
T  18908656 cggggacggggatggggcgggaatacccaaacccattgaggatggggatgagattcagtttctcatcccccttaggtatggttagggtaacaggtaaata 18908557  T
Q  209 tatgggagt 217  Q
     ||||||||    
T  18908556 catgggagt 18908548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 257
Target Start/End: Complemental strand, 24225476 - 24225338
Alignment:
Q  118 ggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagt 217  Q
    ||||||||||||||||||||||| ||| || || |  |||| ||||| |||||||||| | | | | || || |||||||||  |||| |||||| || |    
T  24225476 ggatggggcggggatacccgaacccgtcggagacggcgatgtgattcaatttctcatcaccgttggatatgggtagggtaacgagtaagtatatgagaat 24225377  T
Q  218 tgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
     ||||||||||||| | ||||||||| |||||||||||||    
T  24225376 cgggtatggggacg-ggaaggtaaaacccgtccccacccc 24225338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 110 - 257
Target Start/End: Complemental strand, 30816035 - 30815888
Alignment:
Q  110 ggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatat 209  Q
    |||||||||||||||| |||||||||||||| ||| | ||| |  |||| | ||| |||||||||||||| | | ||  ||||||||||| ||||| |||    
T  30816035 ggggatggggatggggtggggatacccgaacccgtcgaggacggggatggggttcaatttctcatccctgttggatatagatagggtaacgggtaagtat 30815936  T
Q  210 atgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    ||| || |  ||||||| |||| | || |||||| || ||||||||||    
T  30815935 atgagaatcaggtatggagacggggaatgtaaaacccatccccacccc 30815888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 127 - 257
Target Start/End: Original strand, 256874 - 257004
Alignment:
Q  127 ggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttgggtatgg 226  Q
    |||||||||||||||||| ||||| || |||||||||| |||||||||||  | ||| ||  | ||||||||  ||||| | |||  |||| |||||||     
T  256874 ggggatacccgaactcgttggggacgaggatgagattcaatttctcatcctcgttagatataggtagggtaaatggtaagtgtatatgagtagggtatga 256973  T
Q  227 ggacgagaaaggtaaaatccgtccccacccc 257  Q
    ||||| | ||||| ||| |||||||||||||    
T  256974 ggacggggaaggtgaaacccgtccccacccc 257004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 117 - 210
Target Start/End: Original strand, 10142828 - 10142921
Alignment:
Q  117 gggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatata 210  Q
    |||||||||||||||||||||||| ||| ||||| || |||| ||||| |||||||||||| | |  ||| || ||||||||| ||||| ||||    
T  10142828 gggatggggcggggatacccgaacccgtcggggacgaggatgggattcaatttctcatccccgttgagtatgggtagggtaacgggtaagtata 10142921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 100 - 249
Target Start/End: Complemental strand, 20348800 - 20348651
Alignment:
Q  100 tatccactacggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaac 199  Q
    |||||| ||| ||| || |||||||| |||||||||| ||||||| |||||    | || ||||| |||| ||||| ||||||| || || | |||||||    
T  20348800 tatccattacagggttgaggatggggtggggatacccaaactcgttggggacatgggtgtgattcgatttttcatctctgctagatatgggttgggtaac 20348701  T
Q  200 aggtaaatatatgggagttgggtatggggacgagaaaggtaaaatccgtc 249  Q
    |  ||| |||||  |||| |||||||| |||||| |||||||||||||||    
T  20348700 atttaagtatatatgagtagggtatggagacgaggaaggtaaaatccgtc 20348651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 243
Target Start/End: Complemental strand, 32052840 - 32052707
Alignment:
Q  110 ggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatat 209  Q
    ||||| ||||||| |||||||||||| |||| ||| || || |  |||||||||| |||||||||||| | | | || || ||||||||| ||||| |||    
T  32052840 ggggacggggatgaggcggggataccggaacccgttggagacggggatgagattcaatttctcatccccgttggatatgggtagggtaacgggtaagtat 32052741  T
Q  210 atgggagttgggtatggggacgagaaaggtaaaa 243  Q
    ||| || | ||||||| ||||| | |||||||||    
T  32052740 atgagaatcgggtatgaggacggggaaggtaaaa 32052707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 89
Target Start/End: Original strand, 2126900 - 2126967
Alignment:
Q  22 catcatctctttgctggataatgcattacatcattgtgctcggcactaaaaaatacttttatttttat 89  Q
    ||||||||||||||| |||||||  ||||| ||||| ||||   ||||||||||||||||||||||||    
T  2126900 catcatctctttgctagataatgtgttacaacattgcgctctcgactaaaaaatacttttatttttat 2126967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 229
Target Start/End: Original strand, 20611250 - 20611333
Alignment:
Q  146 ggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttgggtatgggga 229  Q
    |||||||  |||||||||| |||||||||||| | | |||| || || |||||||||||| ||||||||||| ||| |||||||    
T  20611250 ggggatggggatgagattcaatttctcatccccgttgggtatgggtatggtaacaggtaagtatatgggagtaggggatgggga 20611333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 32959735 - 32959672
Alignment:
Q  22 catcatctctttgctggataatgcattacatcattgtgctcggcactaaaaaatacttttattt 85  Q
    |||||| ||||| ||||||||||||||||| |||||  |||||  |||||||||||||||||||    
T  32959735 catcatttctttactggataatgcattacaacattgcactcggggctaaaaaatacttttattt 32959672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 111 - 256
Target Start/End: Complemental strand, 11762229 - 11762084
Alignment:
Q  111 gggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatata 210  Q
    ||||||||||||||||||  |||||||||| ||| |||||||  |||||| ||| |||||||| ||| | | | || |  ||||||||||||||| ||||    
T  11762229 gggatggggatggggcggaaatacccgaacccgtcggggatggcgatgaggttcaatttctcacccccgttggatatgagtagggtaacaggtaagtata 11762130  T
Q  211 tgggagttgggtatggggacgagaaaggtaaaatccgtccccaccc 256  Q
    |  || | | ||||||  ||| | || |||||| ||||||||||||    
T  11762129 taagaatcgtgtatggaaacggggaatgtaaaacccgtccccaccc 11762084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 166 - 255
Target Start/End: Complemental strand, 14505827 - 14505738
Alignment:
Q  166 atttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttgggtatggggacgagaaaggtaaaatccgtccccacc 255  Q
    |||||||||||| | | | || || ||||||||| ||||| |||||| || | ||||||||||||||| || |||||| |||||||||||    
T  14505827 atttctcatccccgttggatatgggtagggtaacgggtaagtatatgagaatcgggtatggggacgaggaatgtaaaacccgtccccacc 14505738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 117 - 186
Target Start/End: Complemental strand, 32959647 - 32959578
Alignment:
Q  117 gggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggta 186  Q
    |||||||||| ||||||||||||| ||| ||||| |  |||||||||| |||||||||||| ||| ||||    
T  32959647 gggatggggcagggatacccgaacccgttggggacggggatgagattcgatttctcatccccgctgggta 32959578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 110 - 177
Target Start/End: Original strand, 253125 - 253192
Alignment:
Q  110 ggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccc 177  Q
    |||||||| |||| |  |||||||||||||||||| ||||| |  |||||||||| ||||||||||||    
T  253125 ggggatggagatgtgaaggggatacccgaactcgtcggggacggggatgagattcaatttctcatccc 253192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 258
Target Start/End: Complemental strand, 3245144 - 3244987
Alignment:
Q  99 ttatccactacggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaa 198  Q
    ||||||||| |||||||| | ||||| || |||||||||||| ||  | |||||  |||||||||| ||||| |||| | | | | || ||||||| |||    
T  3245144 ttatccactgcggggatgag-atgggtcgaggatacccgaacccgc-gaggatggggatgagattcgatttcgcatctccgttggatatggataggataa 3245047  T
Q  199 caggtaaatatatgggagttgggtatggggacgagaaaggtaaaatccgtccccaccccc 258  Q
    || |||| |||||| |||| ||||||||||||| | ||| |||||   ||||||||||||    
T  3245046 caagtaagtatatgagagtagggtatggggacgtggaagataaaacatgtccccaccccc 3244987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 116 - 227
Target Start/End: Complemental strand, 14254738 - 14254627
Alignment:
Q  116 ggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatggga 215  Q
    ||||||| ||| ||||||||||||| ||| ||||| |  |||||||||| ||||||||||| || | | || |  |||||||||| |||| |||||| ||    
T  14254738 ggggatgaggcagggatacccgaacccgtcggggacggggatgagattcaatttctcatccatgttcgatatgagtagggtaacatgtaagtatatgaga 14254639  T
Q  216 gttgggtatggg 227  Q
     | |||||||||    
T  14254638 atcgggtatggg 14254627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 257
Target Start/End: Complemental strand, 33062060 - 33061994
Alignment:
Q  191 tagggtaacaggtaaatatatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    ||||||||| ||||| |||||| || | ||||||||||||||| |||||||||| | |||| |||||    
T  33062060 tagggtaacgggtaagtatatgagaatcgggtatggggacgaggaaggtaaaattcatccctacccc 33061994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 29340620 - 29340571
Alignment:
Q  25 catctctttgctggataatgcattacatcattgtgctcggcactaaaaaa 74  Q
    |||||||||| ||||||||||||||||  |||||||||||  ||||||||    
T  29340620 catctctttgttggataatgcattacaaaattgtgctcggagctaaaaaa 29340571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 29342298 - 29342347
Alignment:
Q  25 catctctttgctggataatgcattacatcattgtgctcggcactaaaaaa 74  Q
    |||||||||| ||||||||||||||||  |||||||||||  ||||||||    
T  29342298 catctctttgttggataatgcattacaaaattgtgctcggagctaaaaaa 29342347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 316
Target Start/End: Original strand, 2539519 - 2539562
Alignment:
Q  272 cctaaacaccctttttcaagggaaaaacagttcggtttatataat 316  Q
    ||||||||||||||||||| || |||||||||||| |||||||||    
T  2539519 cctaaacaccctttttcaa-ggtaaaacagttcggattatataat 2539562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 316
Target Start/End: Original strand, 5638930 - 5638973
Alignment:
Q  272 cctaaacaccctttttcaagggaaaaacagttcggtttatataat 316  Q
    ||||||||||||||||||| || |||||||||||| |||||||||    
T  5638930 cctaaacaccctttttcaa-ggtaaaacagttcggattatataat 5638973  T

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Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 316
Target Start/End: Complemental strand, 10310493 - 10310449
Alignment:
Q  272 cctaaacaccctttttcaagggaaaaacagttcggtttatataat 316  Q
    ||||||||||||| |||| || ||||||||||||| |||||||||    
T  10310493 cctaaacacccttattcagggaaaaaacagttcggattatataat 10310449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 51
Target Start/End: Original strand, 34179287 - 34179315
Alignment:
Q  23 atcatctctttgctggataatgcattaca 51  Q
    |||||||||||||||||||||||||||||    
T  34179287 atcatctctttgctggataatgcattaca 34179315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 2e-28; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 108 - 256
Target Start/End: Complemental strand, 44252527 - 44252379
Alignment:
Q  108 acggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaat 207  Q
    ||||||| ||||||||||||||||||||||||| ||| ||||| |  |||| ||||| |||||||||||| | | |||| || ||||||||| ||||| |    
T  44252527 acggggacggggatggggcggggatacccgaacccgtcggggacggggatgggattcaatttctcatccccgttgggtatgggtagggtaacgggtaagt 44252428  T
Q  208 atatgggagttgggtatggggacgagaaaggtaaaatccgtccccaccc 256  Q
    ||||| || | ||||||||||||| |||||||||||  |||||||||||    
T  44252427 atatgagaatcgggtatggggacgggaaaggtaaaactcgtccccaccc 44252379  T

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Target: chr3; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 110 - 257
Target Start/End: Complemental strand, 34154200 - 34154053
Alignment:
Q  110 ggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatat 209  Q
    ||||||||||||| ||||||||||||||||| ||| ||||| |  |||||||||| |||||||||||| |   |||| || ||||||||| ||||| |||    
T  34154200 ggggatggggatgaggcggggatacccgaacccgtcggggacggggatgagattcaatttctcatccccgtggggtatgggtagggtaacgggtaagtat 34154101  T
Q  210 atgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    ||| || | ||||| ||||||| | ||||||||| |||||||||||||    
T  34154100 atgtgaatcgggtacggggacggggaaggtaaaacccgtccccacccc 34154053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 116 - 257
Target Start/End: Original strand, 7470088 - 7470228
Alignment:
Q  116 ggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatggga 215  Q
    ||||||||||||||||||||| ||| ||| ||||| |  |||||||||| |||||||||||| | | |||| || ||||||||| ||||| |||||| ||    
T  7470088 ggggatggggcggggatacccaaacccgtcggggacggggatgagattcaatttctcatccccgttgggtatgggtagggtaacgggtaagtatatgaga 7470187  T
Q  216 gttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
     | ||||||||||||| | ||||||||| |||||||||||||    
T  7470188 atcgggtatggggacg-ggaaggtaaaacccgtccccacccc 7470228  T

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Target: chr3; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 108 - 257
Target Start/End: Original strand, 44107101 - 44107250
Alignment:
Q  108 acggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaat 207  Q
    ||||||| |||||||||||||| |||||||||| ||| ||||| |  |||||||||| |||||||||||| | | |||| || ||||||||| ||||| |    
T  44107101 acggggacggggatggggcgggaatacccgaacccgtcggggacggggatgagattcaatttctcatccccgttgggtatgggtagggtaacgggtaagt 44107200  T
Q  208 atatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    ||||| || | ||||||| ||||| | |||||||||  ||||||||||||    
T  44107201 atatgagaatcgggtatgaggacggggaaggtaaaactcgtccccacccc 44107250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 126 - 257
Target Start/End: Complemental strand, 39728450 - 39728319
Alignment:
Q  126 cggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttgggtatg 225  Q
    ||||||||||| ||| ||| |||||||  |||||||||| |||||||||||| | | |||| || ||||||||||||||| |||||| || | |||||||    
T  39728450 cggggatacccaaacccgtcggggatggggatgagattcaatttctcatccccgttgggtatgggtagggtaacaggtaagtatatgagaatcgggtatg 39728351  T
Q  226 gggacgagaaaggtaaaatccgtccccacccc 257  Q
    |||||| | |||||||||  ||||||||||||    
T  39728350 gggacggggaaggtaaaactcgtccccacccc 39728319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 116 - 272
Target Start/End: Complemental strand, 34025737 - 34025577
Alignment:
Q  116 ggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatggga 215  Q
    ||||||||||||||||||||||||| ||| ||||| |  | |||||||| |||||||||||| | | | || | |||||||||| ||||| |||||| ||    
T  34025737 ggggatggggcggggatacccgaacccgtcggggacggggctgagattcaatttctcatccccgttggatatgaatagggtaacgggtaagtatatgaga 34025638  T
Q  216 gttgggtatggggacgagaaaggtaaaatccgtccccac----ccccaatgccatgcctac 272  Q
     |  ||||||||||||   ||||||||||||||||||||    ||||| ||||||||||||    
T  34025637 atcaggtatggggacggagaaggtaaaatccgtccccactccgccccattgccatgcctac 34025577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 118 - 257
Target Start/End: Complemental strand, 44639051 - 44638912
Alignment:
Q  118 ggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagt 217  Q
    |||||||||||||||| | |||| ||| ||||| |  |||||||||| ||||||||| || | | |||| || ||||||||| ||||| |||||| || |    
T  44639051 ggatggggcggggatatctgaacccgtcggggacggggatgagattcaatttctcattcccgttgggtatgggtagggtaacgggtaagtatatgagaat 44638952  T
Q  218 tgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
     ||||||||||||| | ||||||||| |||||||||||||    
T  44638951 cgggtatggggacggggaaggtaaaacccgtccccacccc 44638912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 122 - 257
Target Start/End: Complemental strand, 29284107 - 29283972
Alignment:
Q  122 ggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttggg 221  Q
    ||||| ||||||||||||| ||| ||||| |  |||| ||||| |||||||||||| | | |||| |||||||||||| ||||| |||||| || | |||    
T  29284107 ggggcagggatacccgaacccgtcggggacggggatgggattcaatttctcatccccgttgggtatggatagggtaacgggtaagtatatgagaatcggg 29284008  T
Q  222 tatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    |||| |||||   ||||||||| |||||||||||||    
T  29284007 tatgaggacggagaaggtaaaacccgtccccacccc 29283972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 110 - 229
Target Start/End: Original strand, 4557609 - 4557728
Alignment:
Q  110 ggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatat 209  Q
    ||||| ||||||||||||| ||||||| ||| ||| ||||| |  |||||| ||| |||||||||||| |   |||| |||||||||||| |||||||||    
T  4557609 ggggacggggatggggcggagatacccaaacccgtcggggacggggatgaggttcaatttctcatccccgtcgggtatggatagggtaacgggtaaatat 4557708  T
Q  210 atgggagttgggtatgggga 229  Q
    ||| || | |||||||||||    
T  4557709 atgagaatcgggtatgggga 4557728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 107 - 257
Target Start/End: Complemental strand, 23580614 - 23580465
Alignment:
Q  107 tacggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaa 206  Q
    ||||||||||||||||||| |||||||||||||| ||| || || |  ||||| |||| |||||||||||| | |   ||  | ||  |||||||||||     
T  23580614 tacggggatggggatggggtggggatacccgaacccgtcggagacggggatgaaattcaatttctcatccccgttgaatataggtaatgtaacaggtaag 23580515  T
Q  207 tatatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    |||||| || | ||||||||||||| | ||||||||| |||||||||||||    
T  23580514 tatatgagaatcgggtatggggacg-ggaaggtaaaacccgtccccacccc 23580465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 117 - 251
Target Start/End: Complemental strand, 49025459 - 49025325
Alignment:
Q  117 gggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggag 216  Q
    |||||||||||||||||||||||| ||| ||| | |  |||| ||||| |||||||||||| | | | || || ||||||||| ||||| |||||| ||     
T  49025459 gggatggggcggggatacccgaacccgtcgggaacggtgatgtgattcaatttctcatccccgttggatatgggtagggtaacgggtaagtatatgagaa 49025360  T
Q  217 ttgggtatggggacgagaaaggtaaaatccgtccc 251  Q
    | ||||||| ||||| | ||||||||| |||||||    
T  49025359 tcgggtatgaggacggggaaggtaaaacccgtccc 49025325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 109 - 251
Target Start/End: Complemental strand, 52572394 - 52572257
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaata 208  Q
    |||||| ||||||||||||||     |||||| ||| ||||| |  |||| ||||| |||||||||||| | | ||||||| ||||||||| ||||| ||    
T  52572394 cggggacggggatggggcggg-----ccgaacccgtcggggacggggatgggattcaatttctcatccccgttgggtacgggtagggtaacgggtaagta 52572300  T
Q  209 tatgggagttgggtatggggacgagaaaggtaaaatccgtccc 251  Q
    |||| || | ||||||||||||| ||||| ||||| |||||||    
T  52572299 tatgagaatcgggtatggggacgtgaaagataaaacccgtccc 52572257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 109 - 254
Target Start/End: Complemental strand, 49579849 - 49579704
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaata 208  Q
    |||||| |||||||||||| |||||||||||| | | ||||| |  ||||| |||| |||||||||||| | ||| || |  ||||||||| ||||| ||    
T  49579849 cggggacggggatggggcgtggatacccgaacccttcggggacggggatgaaattcaatttctcatccccgttagatatgagtagggtaacgggtaagta 49579750  T
Q  209 tatgggagttgggtatggggacgagaaaggtaaaatccgtccccac 254  Q
     ||| || |  |||||||||||| | ||||||||| ||||||||||    
T  49579749 catgagaatcaggtatggggacggggaaggtaaaacccgtccccac 49579704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 109 - 212
Target Start/End: Complemental strand, 44179112 - 44179009
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaata 208  Q
    |||||| |||||||||||||||||||||||||  || ||||| |  |||||||||| |||||||||||  | | |||| || ||||||||| ||||| ||    
T  44179112 cggggacggggatggggcggggatacccgaacctgtcggggacggggatgagattcaatttctcatccacgttgggtatgggtagggtaacgggtaagta 44179013  T
Q  209 tatg 212  Q
    ||||    
T  44179012 tatg 44179009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 109 - 231
Target Start/End: Original strand, 17146453 - 17146575
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaata 208  Q
    |||||| ||||||||||||||||||||||||| | | ||||| |  |||||||||| |||| ||||| | | |  ||| || ||||||||| ||||| ||    
T  17146453 cggggacggggatggggcggggatacccgaacccatcggggacggggatgagattcaatttgtcatctccgttgagtatgggtagggtaacgggtaagta 17146552  T
Q  209 tatgggagttgggtatggggacg 231  Q
    |||| || | |||||||||||||    
T  17146553 tatgagaatcgggtatggggacg 17146575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 119 - 257
Target Start/End: Original strand, 41937362 - 41937500
Alignment:
Q  119 gatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagtt 218  Q
    |||||||||||||||||||||| ||| | ||| |  |||| | ||| |||||||||| | | | | || |  |||||||||||||||||||||| || |     
T  41937362 gatggggcggggatacccgaacccgtcgaggacggggatggggttcaatttctcatctccgttggatatgagtagggtaacaggtaaatatatgagaatc 41937461  T
Q  219 gggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    |||||||| |||| | || |||||| |||||||||||||    
T  41937462 gggtatggagacggggaatgtaaaacccgtccccacccc 41937500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 256
Target Start/End: Original strand, 22536145 - 22536294
Alignment:
Q  107 tacggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaa 206  Q
    ||||||||||||||||| | |||||||||||||| ||| | ||| |  |||||||||| |||||||||||| | | |||| |  ||||||||||| |||     
T  22536145 tacggggatggggatggagtggggatacccgaacccgtcgaggacggggatgagattcaatttctcatccccgttgggtatgagtagggtaacagataag 22536244  T
Q  207 tatatgggagttgggtatggggacgagaaaggtaaaatccgtccccaccc 256  Q
     ||||| || |  | ||| |||||| | ||||||||| |||||| |||||    
T  22536245 catatgagaatcagatatagggacggggaaggtaaaacccgtccacaccc 22536294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 257
Target Start/End: Original strand, 23154317 - 23154458
Alignment:
Q  116 ggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatggga 215  Q
    |||||||||| |||||||||||||| ||| ||||| || |||||||||  |||||||||||| | |   || || ||||||||| | ||| |||||| ||    
T  23154317 ggggatggggaggggatacccgaacccgtcggggacgaggatgagatttaatttctcatccccgttgaatatgggtagggtaacggataagtatatgaga 23154416  T
Q  216 gttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
     | ||||||  | ||| | ||||||||| |||||||||||||    
T  23154417 atcgggtataagaacggggaaggtaaaacccgtccccacccc 23154458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 176
Target Start/End: Complemental strand, 29842094 - 29842025
Alignment:
Q  107 tacggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatcc 176  Q
    ||||||||| |||||||||||| ||||||||||| ||| ||||| |  |||||||||| |||||||||||    
T  29842094 tacggggatagggatggggcggcgatacccgaacccgtcggggacggggatgagattcaatttctcatcc 29842025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 257
Target Start/End: Original strand, 4016338 - 4016484
Alignment:
Q  110 ggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatat 209  Q
    ||||| ||||||||| ||||||||||| ||||||| || || |  |||||| ||| |||||||||||||| | | || || ||||||||| | |||||||    
T  4016338 ggggacggggatgggacggggatacccaaactcgtcggagaag-ggatgaggttcaatttctcatccctgttggatatgggtagggtaacggataaatat 4016436  T
Q  210 atgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    ||  || |  |||||||||||| | || | |||| |||||||||||||    
T  4016437 ataagaatctggtatggggacggggaatgcaaaacccgtccccacccc 4016484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 109 - 252
Target Start/End: Complemental strand, 19111521 - 19111378
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaata 208  Q
    |||||| |||||||| ||||||| |||| ||| ||| ||||| || |||| | ||| ||||||  |||||| ||  || ||||| ||||||| |||| ||    
T  19111521 cggggacggggatggagcggggaaacccaaacccgttggggacgaggatggggttcaatttcttgtccctgttaaatatggataaggtaacatgtaagta 19111422  T
Q  209 tatgggagttgggtatggggacgagaaaggtaaaatccgtcccc 252  Q
    |||| ||   ||||||||||||||| || |||||| ||||||||    
T  19111421 tatgagaaccgggtatggggacgaggaatgtaaaacccgtcccc 19111378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 257
Target Start/End: Original strand, 31127107 - 31127246
Alignment:
Q  118 ggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagt 217  Q
    ||||||||||||||||||||||| ||| ||||| |  |||| | ||| ||||||||| || | | | || || ||||||||| ||||| |||||| || |    
T  31127107 ggatggggcggggatacccgaacccgtcggggacggggatggggttcaatttctcattcccgttggatatgggtagggtaacgggtaagtatatgagaat 31127206  T
Q  218 tgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
     ||||||||||||| | || ||||||  | ||||||||||    
T  31127207 cgggtatggggacggggaatgtaaaactcatccccacccc 31127246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 257
Target Start/End: Original strand, 39655583 - 39655714
Alignment:
Q  126 cggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttgggtatg 225  Q
    ||||||||||||||| |||  ||||    |||| ||||| |||||||||||||| | |||| || ||||||||  ||||| |||||| || |   |||||    
T  39655583 cggggatacccgaacccgtcagggacagggatgggattcaatttctcatccctgttgggtatgggtagggtaatgggtaagtatatgagaatcatgtatg 39655682  T
Q  226 gggacgagaaaggtaaaatccgtccccacccc 257  Q
    |||||| | ||||||||| |||||||||||||    
T  39655683 gggacggggaaggtaaaaaccgtccccacccc 39655714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 160 - 257
Target Start/End: Original strand, 6738726 - 6738823
Alignment:
Q  160 gattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    ||||| |||||||||||| | | |||| || ||||||||  ||||| |||||| || | ||||||||| ||| | ||||||||| |||||||||||||    
T  6738726 gattcaatttctcatccccgttgggtatgggtagggtaatgggtaagtatatgagaatcgggtatgggaacggggaaggtaaaacccgtccccacccc 6738823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 257
Target Start/End: Original strand, 23547333 - 23547429
Alignment:
Q  161 attctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    |||| |||||||||||| | | |||| || ||||||||| | ||| |||||| || | ||||||||||||| | ||| ||||| |||||||||||||    
T  23547333 attcaatttctcatccccgttgggtatgggtagggtaacggataagtatatgagaatcgggtatggggacggggaagataaaacccgtccccacccc 23547429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 243
Target Start/End: Original strand, 30905133 - 30905261
Alignment:
Q  115 tggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatggg 214  Q
    ||||| |||||||| |||| | |||| |||  |||| || |||||||||| |||||  ||||| | | |||| || |||||||||||||||  ||||||     
T  30905133 tgggggtggggcggagatatctgaacccgtctgggacgaggatgagattcgatttccaatccccgttgggtatgggtagggtaacaggtaagaatatgga 30905232  T
Q  215 agttgggtatggggacgagaaaggtaaaa 243  Q
    ||| ||||||||| ||| | |||||||||    
T  30905233 agtagggtatgggaacggggaaggtaaaa 30905261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 316
Target Start/End: Complemental strand, 45712176 - 45712132
Alignment:
Q  272 cctaaacaccctttttcaagggaaaaacagttcggtttatataat 316  Q
    |||||| |||||| ||||||||||||||||||||| |||||||||    
T  45712176 cctaaaaacccttattcaagggaaaaacagttcggattatataat 45712132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 275 - 318
Target Start/End: Original strand, 29035784 - 29035827
Alignment:
Q  275 aaacaccctttttcaagggaaaaacagttcggtttatataattc 318  Q
    |||||||||| || |||||||||||||||||| |||||||||||    
T  29035784 aaacacccttatttaagggaaaaacagttcggattatataattc 29035827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 109 - 178
Target Start/End: Complemental strand, 43582362 - 43582296
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccct 178  Q
    |||||||||||||| ||||||||||||||||| ||| ||||| |  |||||||   ||||||||||||||    
T  43582362 cggggatggggatgaggcggggatacccgaacccgtcggggacggggatgaga---tatttctcatccct 43582296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 30905048 - 30905114
Alignment:
Q  23 atcatctctttgctggataatgcattacatcattgtgctcggcactaaaaaatacttttatttttat 89  Q
    |||||||||||| || ||||||||||||| ||||| ||||||   | |||||||||||||| |||||    
T  30905048 atcatctctttgttgaataatgcattacaacattgcgctcggggttgaaaaatacttttatatttat 30905114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 257
Target Start/End: Complemental strand, 44162487 - 44162421
Alignment:
Q  191 tagggtaacaggtaaatatatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    ||||||||| ||||| |||||| || | ||||||||||||| | |||||||||  ||||||||||||    
T  44162487 tagggtaacgggtaagtatatgagaatcgggtatggggacggggaaggtaaaactcgtccccacccc 44162421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 320
Target Start/End: Complemental strand, 54229987 - 54229941
Alignment:
Q  274 taaacaccctttttcaagggaaaaacagttcggtttatataattcaa 320  Q
    ||||||||||||||||  || |||||||||||| |||||||||||||    
T  54229987 taaacaccctttttcagaggcaaaacagttcggattatataattcaa 54229941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 257
Target Start/End: Original strand, 48391120 - 48391261
Alignment:
Q  116 ggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatggga 215  Q
    |||||||||| ||||||||||||||  || ||||| |  |||||||||| |||||| ||||  | |  ||| || || |||||||||||| |||||| ||    
T  48391120 ggggatggggtggggatacccgaaccagtcggggacggggatgagattcaatttctaatcctcgttgagtatgggtaaggtaacaggtaagtatatgaga 48391219  T
Q  216 gttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
     | ||  ||||||| | | | ||||||| |||||||||||||    
T  48391220 atcggacatggggatggggagggtaaaacccgtccccacccc 48391261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 109 - 213
Target Start/End: Complemental strand, 2487556 - 2487452
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaata 208  Q
    |||||| ||||||| || ||| |||||||||| | | |||||||  ||||| |||| |||||||||||| | | | || || || |||||||||||| ||    
T  2487556 cggggacggggatgtggtgggaatacccgaacccattggggatggggatgaaattcaatttctcatccccgttggatatgggtaaggtaacaggtaagta 2487457  T
Q  209 tatgg 213  Q
    |||||    
T  2487456 tatgg 2487452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 316
Target Start/End: Complemental strand, 3902897 - 3902854
Alignment:
Q  272 cctaaacaccctttttcaagggaaaaacagttcggtttatataat 316  Q
    ||||||||||||||||||| || |||||||||||| |||||||||    
T  3902897 cctaaacaccctttttcaa-ggtaaaacagttcggattatataat 3902854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 316
Target Start/End: Complemental strand, 5127979 - 5127947
Alignment:
Q  284 ttttcaagggaaaaacagttcggtttatataat 316  Q
    ||||||||||||||||||||| |||||||||||    
T  5127979 ttttcaagggaaaaacagttcagtttatataat 5127947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 109 - 217
Target Start/End: Complemental strand, 23329946 - 23329838
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaata 208  Q
    |||||| ||||||||||| || |||||||||| | | ||||| |  | |||||||| |||||||||||| | | | || ||||||| |||| ||||| ||    
T  23329946 cggggacggggatggggcaggaatacccgaacccattggggaagggggtgagattcaatttctcatccccgttggatatggataggataacgggtaagta 23329847  T
Q  209 tatgggagt 217  Q
    |||| ||||    
T  23329846 tatgagagt 23329838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 316
Target Start/End: Original strand, 29048410 - 29048454
Alignment:
Q  272 cctaaacaccctttttcaagggaaaaacagttcggtttatataat 316  Q
    |||||||| |||||||||||||||||||| ||| | |||||||||    
T  29048410 cctaaacatcctttttcaagggaaaaacaattcagattatataat 29048454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 316
Target Start/End: Complemental strand, 30721896 - 30721852
Alignment:
Q  272 cctaaacaccctttttcaagggaaaaacagttcggtttatataat 316  Q
    |||||||||| |||||||||||||||| ||||| | |||||||||    
T  30721896 cctaaacaccatttttcaagggaaaaatagttcagattatataat 30721852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 109 - 177
Target Start/End: Complemental strand, 53631686 - 53631618
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccc 177  Q
    |||||||| ||||| ||||||||||||||||| ||| || || |  |||||| ||| ||||||||||||    
T  53631686 cggggatgtggatgaggcggggatacccgaacccgttggtgacggggatgaggttcaatttctcatccc 53631618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 248
Target Start/End: Original strand, 55438990 - 55439121
Alignment:
Q  116 ggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatggga 215  Q
    ||||||||||| || |||||||||| ||| | ||||| ||||| | ||| | |||||||||| | | | || || ||||||||| ||||| |||||| ||    
T  55438990 ggggatggggcagg-atacccgaacccgtcgaggatggagatggggttcaacttctcatccccgttggatatgggtagggtaacgggtaagtatatgaga 55439088  T
Q  216 gttgggtatggggacgagaaaggtaaaatccgt 248  Q
     | || |||||||||||| || |||||| ||||    
T  55439089 atcggatatggggacgaggaatgtaaaacccgt 55439121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 116 - 275
Target Start/End: Original strand, 14455 - 14617
Alignment:
Q  116 ggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatggga 215  Q
    ||||||||||||||||||||||||| ||| ||| | | ||||| | ||| |||||||||||||| | |||| || ||||||||||||||| |||||| ||    
T  14455 ggggatggggcggggatacccgaacccgtcggg-acggagatggggttcaatttctcatccctgttgggtatgggtagggtaacaggtaagtatatgaga 14553  T
Q  216 gttgggtatggggacgagaaaggtaaaatccgtccccac----ccccaatgccatgcctaccta 275  Q
     | ||||||||||||| | || |||||||||||||||||    ||||| |||||||||||||||    
T  14554 atcgggtatggggacggggaatgtaaaatccgtccccaccccgccccattgccatgcctaccta 14617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 1e-26; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 116 - 257
Target Start/End: Complemental strand, 15889989 - 15889848
Alignment:
Q  116 ggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatggga 215  Q
    ||||||||||| ||||||||||||| ||| ||||| |  |||||||||| |||||||||||| | |||||| || ||||||||||||||| |||||| ||    
T  15889989 ggggatggggcagggatacccgaacccgtcggggacggggatgagattcaatttctcatccccgttaggtatgggtagggtaacaggtaagtatatgaga 15889890  T
Q  216 gttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
     | || |||||||| | | ||||||||| |||||||||||||    
T  15889889 atcggttatggggatggggaaggtaaaacccgtccccacccc 15889848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 117 - 257
Target Start/End: Complemental strand, 40517584 - 40517444
Alignment:
Q  117 gggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggag 216  Q
    |||||||||||||||||||||||| ||  ||||| |  |||||||||| |||||||||||| | | |||| || ||||||||||||||| |||||| ||     
T  40517584 gggatggggcggggatacccgaacccgccggggacggggatgagattcaatttctcatccccgttgggtatgggtagggtaacaggtaagtatatgagaa 40517485  T
Q  217 ttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    | ||||||||||||| | ||||||||| || ||||||||||    
T  40517484 tcgggtatggggacggggaaggtaaaacccatccccacccc 40517444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 116 - 249
Target Start/End: Original strand, 5908993 - 5909126
Alignment:
Q  116 ggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatggga 215  Q
    |||||||||| |||||||||||||| ||| ||||| |  |||||||||| |||||||||||| | | ||||||| ||||||||| ||||| |||||| ||    
T  5908993 ggggatggggaggggatacccgaacccgtcggggacggggatgagattcaatttctcatccccgttgggtacgggtagggtaacgggtaagtatatgaga 5909092  T
Q  216 gttgggtatggggacgagaaaggtaaaatccgtc 249  Q
     | ||||||||||||| | ||||||||| |||||    
T  5909093 atcgggtatggggacggggaaggtaaaacccgtc 5909126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 127 - 256
Target Start/End: Original strand, 17853602 - 17853730
Alignment:
Q  127 ggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttgggtatgg 226  Q
    |||||||||||||| ||| ||||| |  |||||||||| |||||||||||| | | |||| || ||||||||||||||| |||||| || | ||||||||    
T  17853602 ggggatacccgaacccgtcggggacggggatgagattcaatttctcatccc-gttgggtatgggtagggtaacaggtaagtatatgagaatcgggtatgg 17853700  T
Q  227 ggacgagaaaggtaaaatccgtccccaccc 256  Q
    ||||| | ||||||||| ||||||||||||    
T  17853701 ggacggggaaggtaaaacccgtccccaccc 17853730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 109 - 255
Target Start/End: Complemental strand, 28045437 - 28045291
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaata 208  Q
    |||||||||||||| || |||||||||||||| ||| ||||| ||  |||| |||| |||||||||||| | |  ||| || ||||||||||||||| ||    
T  28045437 cggggatggggatgtggtggggatacccgaacccgtcggggacgagaatgaaattcaatttctcatccccgttgagtatgggtagggtaacaggtaagta 28045338  T
Q  209 tatgggagttgggtatggggacgagaaaggtaaaatccgtccccacc 255  Q
    |||| || | |  |||||||| | ||||||||||| |||||||||||    
T  28045337 tatgagaatcgaatatggggatgggaaaggtaaaacccgtccccacc 28045291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 109 - 257
Target Start/End: Original strand, 20973789 - 20973937
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaata 208  Q
    |||||| ||||||||||| ||||||||||||| ||| ||| | |  |||||||||| |||||||||||| | | | || || ||||||||||||||| ||    
T  20973789 cggggacggggatggggcagggatacccgaacccgtcgggtacggggatgagattcaatttctcatccccgttggatatgggtagggtaacaggtaagta 20973888  T
Q  209 tatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    |||  || |  | |||||||||| | ||||||||| |||||||||||||    
T  20973889 tataagaatcagttatggggacggggaaggtaaaacccgtccccacccc 20973937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 109 - 257
Target Start/End: Original strand, 23045317 - 23045465
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaata 208  Q
    ||||||||||||||||||||| |||||||||| | | ||||| |  |||| ||||| |||||||||||| | | | || || ||||||||| ||||| ||    
T  23045317 cggggatggggatggggcgggaatacccgaacccattggggacggggatgggattcaatttctcatccccgttggatatgggtagggtaacgggtaagta 23045416  T
Q  209 tatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    ||||||||| ||| ||||||| | | |||  |||| |||||||||||||    
T  23045417 tatgggagtaggggatggggatggggaagacaaaacccgtccccacccc 23045465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 114 - 257
Target Start/End: Original strand, 40188025 - 40188168
Alignment:
Q  114 atggggatgggg-cggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatg 212  Q
    |||||||||||| |||| |||||||||| ||| ||| |||  ||||||||||||| | ||||||||||| |||| || ||||||||| ||||||||| ||    
T  40188025 atggggatgggggcgggtatacccgaacccgtcggg-atggggatgagattctatctatcatccctgctgggtatgggtagggtaacgggtaaatatttg 40188123  T
Q  213 ggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    |  || ||||||||||||| | ||||| ||| || ||||||||||    
T  40188124 gacgtagggtatggggacggggaaggtcaaacccatccccacccc 40188168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 107 - 254
Target Start/End: Original strand, 13402305 - 13402452
Alignment:
Q  107 tacggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaa 206  Q
    ||||||||||||||| ||| |||||||||||||| | | ||||| |  |||||||||| |||||||||||| | | ||||  | ||||||||| |||||     
T  13402305 tacggggatggggatagggtggggatacccgaacccatcggggacggggatgagattcaatttctcatccccgttgggtataggtagggtaacgggtaag 13402404  T
Q  207 tatatgggagttgggtatggggacgagaaaggtaaaatccgtccccac 254  Q
    |||||  || |  | |||||||||| ||||||||||||| ||||||||    
T  13402405 tatataagaatcagatatggggacgggaaaggtaaaatctgtccccac 13402452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 25 - 257
Target Start/End: Original strand, 18452165 - 18452399
Alignment:
Q  25 catctctttgctggataatgcattacatcattgtgctcggcactaaaaaatacttttatttttatcnnnnnnnn-ttatccactacggggatggggatgg 123  Q
    ||||| ||||||||||||||||||||| ||||| | ||||  ||||||| |||||||||||||||          |||| || | || ||||||| |||     
T  18452165 catctttttgctggataatgcattacaacattgcgttcggggctaaaaattacttttatttttattaaaagaaaattatacattgcgaggatgggaatgt 18452264  T
Q  124 ggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggataggg-taacaggtaaatatatgggagttgggt 222  Q
    ||||||||| | ||||| | | ||||| |  |||| |||||  ||||||||||||||| |||| || ||||| ||||| |||| |||||| |||| ||||    
T  18452265 ggcggggatgcacgaacccatcggggaaggggatgggattcggtttctcatccctgctgggtatgggtaggggtaacaagtaagtatatgagagtagggt 18452364  T
Q  223 atggggacgagaaaggtaaaatccgtccccacccc 257  Q
    |||||||||||  | |||||| || ||||||||||    
T  18452365 atggggacgaggcatgtaaaacccatccccacccc 18452399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 116 - 257
Target Start/End: Original strand, 22695212 - 22695353
Alignment:
Q  116 ggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatggga 215  Q
    ||||||||||||||||||||||||| ||| ||  | |  |||| ||||| ||||||||||||   | |||| || |||||||||  |||| |||||| ||    
T  22695212 ggggatggggcggggatacccgaacccgtcggaaacggggatgggattcaatttctcatccccattgggtatgggtagggtaacgagtaagtatatgaga 22695311  T
Q  216 gttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
     |||||||| |||||| | ||||||||| |||||||||||||    
T  22695312 attgggtatagggacggggaaggtaaaacccgtccccacccc 22695353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 107 - 257
Target Start/End: Original strand, 3565027 - 3565170
Alignment:
Q  107 tacggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaa 206  Q
    |||||||||||||||| || ||||||| |||||| ||| ||||||||      ||||| |||||||||||| | | | || || ||||||||| |||||     
T  3565027 tacggggatggggatgaggtggggatatccgaacccgtcggggatga------gattcaatttctcatccccgttggatatgggtagggtaacgggtaag 3565120  T
Q  207 tatatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    |||||| || | ||||||||||||| | ||||||||| |||||||||||||    
T  3565121 tatatgagaatcgggtatggggacg-ggaaggtaaaacccgtccccacccc 3565170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 114 - 257
Target Start/End: Original strand, 27900770 - 27900913
Alignment:
Q  114 atggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgg 213  Q
    ||||| |||||||||| |||||||||| ||| ||||| |  |||| ||| | |||||||||||| | | |||| ||  |||| || |||||| ||| |||    
T  27900770 atgggtatggggcgggtatacccgaacccgtcggggacggggatgggatacgatttctcatccccgttgggtatgggcaggggaataggtaagtatgtgg 27900869  T
Q  214 gagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
     ||| |||||||||||||  ||| ||||||||||||||||||||    
T  27900870 aagtagggtatggggacggaaaatgtaaaatccgtccccacccc 27900913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 274 - 318
Target Start/End: Complemental strand, 32842061 - 32842017
Alignment:
Q  274 taaacaccctttttcaagggaaaaacagttcggtttatataattc 318  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  32842061 taaacaccctttttcaagggaaaaacagttcggattatataattc 32842017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 154 - 257
Target Start/End: Complemental strand, 1218527 - 1218424
Alignment:
Q  154 agatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttgggtatggggacgagaaaggtaaaatccgtcccca 253  Q
    ||||||||||| |||||||||||| | | |||| |  || |||||| ||||| |||||| || | ||||||||||||| | ||||||||| |||||||||    
T  1218527 agatgagattcaatttctcatccccgttgggtatgagtaaggtaacgggtaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtcccca 1218428  T
Q  254 cccc 257  Q
    ||||    
T  1218427 cccc 1218424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 104 - 217
Target Start/End: Original strand, 12774089 - 12774202
Alignment:
Q  104 cactacggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggt 203  Q
    ||||||| ||| ||||||| |||||| |||||||||| | | ||||| || |||||||||| |||||| ||||| |   |||| || ||||||||| |||    
T  12774089 cactacgaggacggggatgaggcgggaatacccgaacccattggggacgaggatgagattcaatttcttatccccgtcgggtatgggtagggtaacgggt 12774188  T
Q  204 aaatatatgggagt 217  Q
    || |||||||||||    
T  12774189 aagtatatgggagt 12774202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 272 - 320
Target Start/End: Complemental strand, 1350402 - 1350354
Alignment:
Q  272 cctaaacaccctttttcaagggaaaaacagttcggtttatataattcaa 320  Q
    |||||||| | |||||||||||||||||||||||| |||||||||||||    
T  1350402 cctaaacatcttttttcaagggaaaaacagttcggattatataattcaa 1350354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 272 - 316
Target Start/End: Original strand, 13908577 - 13908621
Alignment:
Q  272 cctaaacaccctttttcaagggaaaaacagttcggtttatataat 316  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||    
T  13908577 cctaaacactctttttcaagggaaaaacagttcggattatataat 13908621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 109 - 257
Target Start/End: Complemental strand, 30996382 - 30996235
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaata 208  Q
    |||||| || |||||||| ||||||||||||  ||| ||||| |  |||||||||| |||||||||||| | |   ||  | || |||||||||||||||    
T  30996382 cggggacggagatggggcagggatacccgaatccgtcggggacggggatgagattcaatttctcatccc-gttgaatataggtaaggtaacaggtaaata 30996284  T
Q  209 tatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    |||| || | ||||||| |||||   ||||||||| |||||||||||||    
T  30996283 tatgagaatcgggtatgaggacggagaaggtaaaacccgtccccacccc 30996235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 109 - 177
Target Start/End: Original strand, 33862486 - 33862554
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccc 177  Q
    |||||| ||||||||||||||||||||||||| ||| ||||| |  |||||| ||| ||||||||||||    
T  33862486 cggggacggggatggggcggggatacccgaacccgtcggggacggggatgaggttcaatttctcatccc 33862554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 8020425 - 8020362
Alignment:
Q  26 atctctttgctggataatgcattacatcattgtgctcggcactaaaaaatacttttatttttat 89  Q
    ||||||||| |||||||||||||||| |||||| ||||   ||||||||||| |||||||||||    
T  8020425 atctctttgttggataatgcattacagcattgtactcgtggctaaaaaatacatttatttttat 8020362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 176
Target Start/End: Original strand, 12834888 - 12834947
Alignment:
Q  117 gggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatcc 176  Q
    |||||||||||||||||||||||| | | ||||| | ||||||||||| |||||||||||    
T  12834888 gggatggggcggggatacccgaacccatcggggacggagatgagattcaatttctcatcc 12834947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 29664781 - 29664715
Alignment:
Q  22 catcatctctttgctggataatgcattacatcattgtgctcggcactaaaaaatacttttatttttat 89  Q
    ||||||||  |||||||||||||||||||| ||||| ||||||   ||||||||||||||||||||||    
T  29664781 catcatcttgttgctggataatgcattacaacattgcgctcgg-ggtaaaaaatacttttatttttat 29664715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 87
Target Start/End: Complemental strand, 35583925 - 35583862
Alignment:
Q  24 tcatctctttgctggataatgcattacatcattgtgctcggcactaaaaaatacttttattttt 87  Q
    ||||||||||| |||||||||||||||| ||||| |||||   || ||||||||||||||||||    
T  35583925 tcatctctttgttggataatgcattacaacattgcgctcgtggctgaaaaatacttttattttt 35583862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 318
Target Start/End: Original strand, 27212742 - 27212784
Alignment:
Q  276 aacaccctttttcaagggaaaaacagttcggtttatataattc 318  Q
    |||||||||||| |||||||||||||||||| |||||||||||    
T  27212742 aacaccctttttgaagggaaaaacagttcggattatataattc 27212784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 7350699 - 7350752
Alignment:
Q  35 ctggataatgcattacatcattgtgctcggcactaaaaaatacttttattttta 88  Q
    ||||||||||||||||| ||||| ||||||  || |||||||||||||||||||    
T  7350699 ctggataatgcattacaacattgcgctcggagctgaaaaatacttttattttta 7350752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 104 - 217
Target Start/End: Original strand, 12712825 - 12712938
Alignment:
Q  104 cactacggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggt 203  Q
    ||||||||||| ||||||| ||| || |||||||||| | | ||||| || |||||||||| |||||| ||||| |   | || || ||||||||| |||    
T  12712825 cactacggggacggggatgaggcaggaatacccgaacccattggggacgaggatgagattcaatttcttatccccgtcggatatgggtagggtaacgggt 12712924  T
Q  204 aaatatatgggagt 217  Q
    || |||||||||||    
T  12712925 aagtatatgggagt 12712938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 109 - 271
Target Start/End: Original strand, 27088655 - 27088821
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaata 208  Q
    |||||||| ||||||||||||||||||| ||   || ||||| |  |||||| ||| ||||| |||||| | | | || || ||||||||| ||||||||    
T  27088655 cggggatgaggatggggcggggatacccaaatcagtcggggacggggatgaggttcaatttcccatccccgttggatatgggtagggtaacgggtaaata 27088754  T
Q  209 tatgggagttgggtatggggacgagaaaggtaaaatccgtcccca----cccccaatgccatgccta 271  Q
    |||   | | ||||||| ||| | | || ||||||||||||||||    ||||||||||||||||||    
T  27088755 tattaaaatcgggtatgaggaaggggaatgtaaaatccgtccccaccctcccccaatgccatgccta 27088821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 212
Target Start/End: Original strand, 36579562 - 36579658
Alignment:
Q  116 ggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatg 212  Q
    |||||||||| ||||||||||||||  ||   ||| | ||||||||||| |||||||||||| | | |||| || |||||||||| |||| ||||||    
T  36579562 ggggatggggtggggatacccgaacctgtttaggacggagatgagattcaatttctcatccccgttgggtatgggtagggtaacatgtaagtatatg 36579658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 257
Target Start/End: Original strand, 38006774 - 38006922
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaata 208  Q
    |||||| ||||||||||||||||||||| ||| | | ||||| |   ||| | ||| |||||||||||| | | |||| || ||||||||| | ||| ||    
T  38006774 cggggacggggatggggcggggatacccaaacccatcggggacgggtatggggttcaatttctcatccccgttgggtatgggtagggtaacggataagta 38006873  T
Q  209 tatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    |||  || | ||||||||| ||| | || |||||| |||||||||||||    
T  38006874 tataagaatcgggtatgggaacggggaatgtaaaacccgtccccacccc 38006922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 155 - 257
Target Start/End: Complemental strand, 24207377 - 24207277
Alignment:
Q  155 gatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttgggtatggggacgagaaaggtaaaatccgtccccac 254  Q
    |||||||||| |||||||||||   ||||||  || |||||||||  |||| |||||| |||| || |||||||| ||| ||||||||| || |||||||    
T  24207377 gatgagattcgatttctcatcc--tctaggtctgggtagggtaacgagtaagtatatgagagtaggatatggggatgaggaaggtaaaacccatccccac 24207280  T
Q  255 ccc 257  Q
    |||    
T  24207279 ccc 24207277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 257
Target Start/End: Complemental strand, 38972552 - 38972502
Alignment:
Q  207 tatatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    ||||||||||| ||||||||||||| | |||||||||  ||||||||||||    
T  38972552 tatatgggagtagggtatggggacggggaaggtaaaactcgtccccacccc 38972502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 316
Target Start/End: Complemental strand, 40613765 - 40613723
Alignment:
Q  274 taaacaccctttttcaagggaaaaacagttcggtttatataat 316  Q
    |||||||| ||||| |||||||||||||||||| |||||||||    
T  40613765 taaacaccattttttaagggaaaaacagttcggattatataat 40613723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 315
Target Start/End: Complemental strand, 4028064 - 4028027
Alignment:
Q  278 caccctttttcaagggaaaaacagttcggtttatataa 315  Q
    ||||||| ||||||||||||||||||||| ||||||||    
T  4028064 cacccttattcaagggaaaaacagttcggattatataa 4028027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 253
Target Start/End: Complemental strand, 4920610 - 4920473
Alignment:
Q  116 ggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatggga 215  Q
    ||||| ||||||||||||||||||| ||| ||||| |  |||| |||||  ||||||||||  | | |||| || ||||||||| ||||| ||||||  |    
T  4920610 ggggacggggcggggatacccgaacccgtcggggacggggatgggattcattttctcatcctcgttgggtatgggtagggtaacgggtaagtatatgata 4920511  T
Q  216 gttgggtatggggacgagaaaggtaaaatccgtcccca 253  Q
     | |||||| ||||   | ||||||||| |||||||||    
T  4920510 atcgggtatagggatagggaaggtaaaacccgtcccca 4920473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 87
Target Start/End: Complemental strand, 6809974 - 6809910
Alignment:
Q  22 catcatctctttgctggataatgcattacatcattgtgctcggcactaaaaaatacttttattttt 87  Q
    |||||||| ||||||||||||||||||||| ||||  ||||||  || |||||||||| |||||||    
T  6809974 catcatct-tttgctggataatgcattacaacattacgctcggagcttaaaaatacttctattttt 6809910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 150
Target Start/End: Original strand, 27303039 - 27303080
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtagggga 150  Q
    ||||||| |||||||||||||||||||||||| ||| |||||    
T  27303039 cggggatagggatggggcggggatacccgaacccgtcgggga 27303080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 177
Target Start/End: Complemental strand, 35311595 - 35311534
Alignment:
Q  116 ggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccc 177  Q
    |||||||||| |||||||||||||  ||| ||||||| ||||| ||||| |||| |||||||    
T  35311595 ggggatggggtggggatacccgaatccgtcggggatggagatgggattcaatttttcatccc 35311534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 140
Target Start/End: Complemental strand, 39422155 - 39422114
Alignment:
Q  99 ttatccactacggggatggggatggggcggggatacccgaac 140  Q
    ||||||| | ||||||||||||||||||| ||||||||||||    
T  39422155 ttatccattgcggggatggggatggggcgcggatacccgaac 39422114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 109 - 225
Target Start/End: Original strand, 6093409 - 6093525
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaata 208  Q
    |||||| ||||||| |||||||||| |||||| ||| ||||| |  |||  ||||| |||||||||||| | | | || || |||||||||| |||| ||    
T  6093409 cggggacggggatgaggcggggatatccgaacccgtcggggacggggataggattcaatttctcatccccgttggatatgggtagggtaacaagtaagta 6093508  T
Q  209 tatgggagttgggtatg 225  Q
    |||| || | |||||||    
T  6093509 tatgagaatcgggtatg 6093525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 273
Target Start/End: Original strand, 6156231 - 6156381
Alignment:
Q  126 cggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttgggtatg 225  Q
    ||||||||||||||| ||| ||||||| |||||  | || |||||||||||  | | | || || ||||||||| ||||| |||||  ||   |||||||    
T  6156231 cggggatacccgaacccgtcggggatggagatggaactcaatttctcatcctcgttggatatgggtagggtaacgggtaagtatataagaaacgggtatg 6156330  T
Q  226 gggacgagaaaggtaaaatccgtccccac---ccccaatgccatgcctacc 273  Q
    |||||| | |||||||||   ||||||||   ||||| |||||||||||||    
T  6156331 gggacggggaaggtaaaacttgtccccacccgccccattgccatgcctacc 6156381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 257
Target Start/End: Original strand, 12866864 - 12867004
Alignment:
Q  117 gggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggag 216  Q
    ||||||||||||||||| |||||| | | |||||   ||||||||||| |||||||||||  | | |||| ||||||| |||| | ||| |||||| ||     
T  12866864 gggatggggcggggatatccgaacccatcggggacagagatgagattcaatttctcatccacgttgggtatggataggataacggataagtatatgagaa 12866963  T
Q  217 ttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    | | |||| || ||| | ||||||||  ||||||| |||||    
T  12866964 tcgagtataggaacggggaaggtaaaccccgtcccaacccc 12867004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 316
Target Start/End: Original strand, 18514831 - 18514875
Alignment:
Q  272 cctaaacaccctttttcaagggaaaaacagttcggtttatataat 316  Q
    ||||||||||||| |||| |||||||||||||| | |||||||||    
T  18514831 cctaaacacccttattcaggggaaaaacagttcagattatataat 18514875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 316
Target Start/End: Original strand, 20891643 - 20891686
Alignment:
Q  272 cctaaacaccctttttcaagggaaaaacagttcggtttatataat 316  Q
    ||||||||||||||||||| || |||||||||||| |||||||||    
T  20891643 cctaaacaccctttttcaa-ggtaaaacagttcggattatataat 20891686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 316
Target Start/End: Complemental strand, 38692874 - 38692831
Alignment:
Q  272 cctaaacaccctttttcaagggaaaaacagttcggtttatataat 316  Q
    ||||||||||||||||||| || |||||||||||| |||||||||    
T  38692874 cctaaacaccctttttcaa-ggtaaaacagttcggattatataat 38692831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 316
Target Start/End: Original strand, 39524806 - 39524849
Alignment:
Q  272 cctaaacaccctttttcaagggaaaaacagttcggtttatataat 316  Q
    ||||||||||||||||||| || |||||||||||| |||||||||    
T  39524806 cctaaacaccctttttcaa-ggtaaaacagttcggattatataat 39524849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 1e-26; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 116 - 257
Target Start/End: Original strand, 40087768 - 40087909
Alignment:
Q  116 ggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatggga 215  Q
    ||||||||||||||||||||||||| ||| ||||| |  |||||||||| ||||||||||||   | |||| || ||||||||| ||||| |||||| ||    
T  40087768 ggggatggggcggggatacccgaacccgtcggggacggggatgagattcaatttctcatccccattgggtatgggtagggtaacgggtaagtatatgaga 40087867  T
Q  216 gttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
     | ||||||||||||| | ||||||||| |||||||||||||    
T  40087868 atcgggtatggggacggggaaggtaaaacccgtccccacccc 40087909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 109 - 257
Target Start/End: Complemental strand, 20774417 - 20774269
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaata 208  Q
    |||||| ||||||||||||||||||||||||| ||| ||||| |  |||| ||||| |||||||||||| | | | || || ||||||||| ||||| ||    
T  20774417 cggggacggggatggggcggggatacccgaacccgtcggggacggggatgggattcaatttctcatccccgttggatatgggtagggtaacgggtaagta 20774318  T
Q  209 tatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    |||| || | ||||||||||||| | ||||||||| |||||||||||||    
T  20774317 tatgagaatcgggtatggggacggggaaggtaaaacccgtccccacccc 20774269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 109 - 257
Target Start/End: Complemental strand, 24710643 - 24710495
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaata 208  Q
    |||||| ||||||||||||||||||||||||| ||| ||||| |  |||||||||| |||||||||||| | |  |||  | ||||||||||||||| ||    
T  24710643 cggggacggggatggggcggggatacccgaacccgtcggggacggggatgagattcaatttctcatccccgttgagtataggtagggtaacaggtaagta 24710544  T
Q  209 tatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    |||| || | |||||||| |||| | ||||||||| |||||||||||||    
T  24710543 tatgagaatcgggtatggagacggggaaggtaaaacccgtccccacccc 24710495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 110 - 257
Target Start/End: Complemental strand, 34610858 - 34610711
Alignment:
Q  110 ggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatat 209  Q
    ||||| ||||||||||| ||||||||||||| ||| ||||| || |||||||||| |||||||||||| | | |||| || |||||||||  |||| |||    
T  34610858 ggggacggggatggggcagggatacccgaacccgtcggggacgaggatgagattcaatttctcatccccgttgggtatgggtagggtaacgagtaagtat 34610759  T
Q  210 atgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    ||| || | ||||||||||||| | ||||||||| || ||||||||||    
T  34610758 atgagaatcgggtatggggacggggaaggtaaaacccatccccacccc 34610711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 107 - 231
Target Start/End: Complemental strand, 17134734 - 17134610
Alignment:
Q  107 tacggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaa 206  Q
    ||||||||||||||||||| ||||||| |||||| ||| ||||| | ||||||||||| |||||||||||||| |  ||| |  ||||||||| |||||     
T  17134734 tacggggatggggatggggtggggatatccgaacccgttggggacggagatgagattcaatttctcatccctgttgagtatgagtagggtaacgggtaag 17134635  T
Q  207 tatatgggagttgggtatggggacg 231  Q
    |||||| || |||||||||||||||    
T  17134634 tatatgagaattgggtatggggacg 17134610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 107 - 257
Target Start/End: Original strand, 17092261 - 17092411
Alignment:
Q  107 tacggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaa 206  Q
    ||||||||||||||||| | |||||||||||||| ||| ||||| |  |||||||||| |||||||||||||| | | || |  ||||||||| |||||     
T  17092261 tacggggatggggatggagtggggatacccgaacccgtcggggacggggatgagattcaatttctcatccctgttggatatgtgtagggtaacgggtaag 17092360  T
Q  207 tatatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
     ||||| || | || |||| ||||||| ||||||||| |||||||||||||    
T  17092361 catatgagaatcggatatgaggacgaggaaggtaaaacccgtccccacccc 17092411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 109 - 251
Target Start/End: Original strand, 24237064 - 24237206
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaata 208  Q
    |||||| || ||||||| |||||||||||||| ||| ||| | || |||||||||| |||||||||||| | | |||| || | |||||||  |||| ||    
T  24237064 cggggacggcgatggggtggggatacccgaacccgtcgggcacgaggatgagattcaatttctcatccccgttgggtatgggtggggtaacgagtaagta 24237163  T
Q  209 tatgggagttgggtatggggacgagaaaggtaaaatccgtccc 251  Q
    |||| || | ||||||||||||||| |||||||||||||||||    
T  24237164 tatgagaatcgggtatggggacgaggaaggtaaaatccgtccc 24237206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 117 - 257
Target Start/End: Complemental strand, 28297710 - 28297570
Alignment:
Q  117 gggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggag 216  Q
    |||||||||||||||||||||||| ||| ||||| |  |||| ||||| ||||||||| || | | |||| || | ||||||| ||||| |||||| ||     
T  28297710 gggatggggcggggatacccgaacccgtcggggacggggatgggattcaatttctcattcccgttgggtatgggtcgggtaacgggtaagtatatgagaa 28297611  T
Q  217 ttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    | ||||||||||||| | ||||||||| |||||||||||||    
T  28297610 tcgggtatggggacggggaaggtaaaacccgtccccacccc 28297570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 22 - 89
Target Start/End: Original strand, 25155105 - 25155172
Alignment:
Q  22 catcatctctttgctggataatgcattacatcattgtgctcggcactaaaaaatacttttatttttat 89  Q
    ||||||||||||| ||| |||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  25155105 catcatctctttgttgggtaatgcattacagcattgtgctcgggactaaaaaatacttttatttttat 25155172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 116 - 257
Target Start/End: Complemental strand, 13390233 - 13390092
Alignment:
Q  116 ggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatggga 215  Q
    |||||||||| |||||||||||||| ||| ||||| |  |||| ||||| |||||||||||| | | | || || ||||||||| | ||| |||||| ||    
T  13390233 ggggatggggtggggatacccgaacccgtcggggacggggatgggattcaatttctcatccccgttggatatgggtagggtaacggttaagtatatgaga 13390134  T
Q  216 gttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
     | ||||||||||||| | ||||||||| |||||||||||||    
T  13390133 atcgggtatggggacggggaaggtaaaacccgtccccacccc 13390092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 109 - 257
Target Start/End: Original strand, 36187525 - 36187673
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaata 208  Q
    |||||| |||||||||| |||||||||||||  | | ||||| |  |||| ||||| |||||||||||| | | |||| || ||||||||| ||||| ||    
T  36187525 cggggacggggatggggtggggatacccgaatccatcggggacggggatgggattcaatttctcatccccgttgggtatgggtagggtaacgggtaagta 36187624  T
Q  209 tatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    || | || | || |||||||||| | ||||||||| |||||||||||||    
T  36187625 tacgagaatcggatatggggacggggaaggtaaaacccgtccccacccc 36187673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 22 - 253
Target Start/End: Complemental strand, 8880261 - 8880032
Alignment:
Q  22 catcatctctttgctggataatgcattacatcattgtgctcggcactaaaaaatacttttatttttatcnnnnnnnnttatccactacggggatggggat 121  Q
    |||| |||||||||||||||||||||||||  ||||  |||||  ||||||| ||||||||| |||||         | ||||||||||||||||  |||    
T  8880261 catcgtctctttgctggataatgcattacaaaattgcactcggggctaaaaattacttttatatttattaaaaaatat-atccactacggggatgatgat 8880163  T
Q  122 ggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttggg 221  Q
    ||||||||||||||||||| | |  || | |  |||||||||| |||||||||||| |||   || || ||||||||   |||| ||||| ||||| |||    
T  8880162 ggggcggggatacccgaacccattaggaacggggatgagattcgatttctcatccc-gctgaatatgggtagggtaatgagtaagtatataggagtaggg 8880064  T
Q  222 tatggggacgagaaaggtaaaatccgtcccca 253  Q
    |||| ||||| | | ||||||| |||||||||    
T  8880063 tatgaggacggggacggtaaaacccgtcccca 8880032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 123 - 257
Target Start/End: Complemental strand, 16903275 - 16903141
Alignment:
Q  123 gggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttgggt 222  Q
    |||||||||||||||||| ||| ||||| |  |||| ||||| |||||||||||| | | | || || ||||||||| | |||||| |||||||| ||||    
T  16903275 gggcggggatacccgaacccgtcggggacggggatgggattcgatttctcatccccgatggatatgggtagggtaacggataaataaatgggagtagggt 16903176  T
Q  223 atggggacgagaaaggtaaaatccgtccccacccc 257  Q
    ||||||| | | ||||||| |  ||||||||||||    
T  16903175 atggggatggggaaggtaatactcgtccccacccc 16903141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 107 - 257
Target Start/End: Complemental strand, 23966645 - 23966495
Alignment:
Q  107 tacggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaa 206  Q
    ||||||||||||||||||| ||||||||| |||| ||| ||||| |  |||| ||||| ||||||||||   | | |||| || ||||||||  |||||     
T  23966645 tacggggatggggatggggtggggataccagaacccgtcggggacggggatgggattcaatttctcatcttcgttgggtatgggtagggtaatgggtaag 23966546  T
Q  207 tatatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    |||||| || | || |||||||||| | |||||||||  ||||||||||||    
T  23966545 tatatgagaatcggttatggggacggggaaggtaaaactcgtccccacccc 23966495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 107 - 257
Target Start/End: Original strand, 45866487 - 45866637
Alignment:
Q  107 tacggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaa 206  Q
    |||||||||||||||| || |||||||||||||  ||| ||||| | ||||||||||| |||||| ||||| | | ||||  | ||| ||||| |||||     
T  45866487 tacggggatggggatgaggtggggatacccgaatccgtcggggacggagatgagattcaatttcttatccccgttgggtataggtagagtaacgggtaag 45866586  T
Q  207 tatatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    |||||| || | | ||||| ||||| | |||||||||  ||||||||||||    
T  45866587 tatatgagaatcgagtatgaggacggggaaggtaaaacacgtccccacccc 45866637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 257
Target Start/End: Complemental strand, 51421634 - 51421532
Alignment:
Q  155 gatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttgggtatggggacgagaaaggtaaaatccgtccccac 254  Q
    |||||||||| |||||||||||| | | | || |  ||||||||| ||||| |||||| || | ||||||||||| ||| ||||||||||||||||||||    
T  51421634 gatgagattcaatttctcatccccgttggatatgagtagggtaacgggtaagtatatgagaatcgggtatggggatgaggaaggtaaaatccgtccccac 51421535  T
Q  255 ccc 257  Q
    |||    
T  51421534 ccc 51421532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 110 - 271
Target Start/End: Original strand, 49742225 - 49742385
Alignment:
Q  110 ggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatat 209  Q
    ||||| ||||||||||||||||||| | ||| |||  |||| |  |||||| ||| |||||||||||| | ||| || |||||||||||| | |||||||    
T  49742225 ggggacggggatggggcggggatacacaaacccgttagggacggggatgaggttcaatttctcatccccgttagatatggatagggtaacggataaatat 49742324  T
Q  210 atgggagttgggtatggggacgagaaaggtaaaatccgtccccacccccaatgccatgccta 271  Q
    ||| || | || |||||| ||| | || | |||| ||||||||| ||||| |||||||||||    
T  49742325 atgagaatcggatatgggaacggggaatgcaaaacccgtcccca-ccccactgccatgccta 49742385  T

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Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 14890973 - 14890907
Alignment:
Q  22 catcatctctttgctggataatgcattacatcattgtgctcggcactaaaaaatacttttatttttat 89  Q
    |||| ||||||||||||||||||||||||| |||||  ||||| ||| ||||||||||||||||||||    
T  14890973 catcgtctctttgctggataatgcattacaacattgcactcgg-actgaaaaatacttttatttttat 14890907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 126 - 257
Target Start/End: Original strand, 23493645 - 23493776
Alignment:
Q  126 cggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttgggtatg 225  Q
    ||||||||||||||| |||  |||| |  |||| ||||| |||||||||||| | |   || || ||||||||| ||||| |||||| || | |||||||    
T  23493645 cggggatacccgaacccgtcagggacggggatgggattcaatttctcatccccgttgaatatgggtagggtaacgggtaagtatatgagaatcgggtatg 23493744  T
Q  226 gggacgagaaaggtaaaatccgtccccacccc 257  Q
    |||||| | ||||||||| |||||||||||||    
T  23493745 gggacggggaaggtaaaacccgtccccacccc 23493776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 271
Target Start/End: Complemental strand, 14892409 - 14892325
Alignment:
Q  191 tagggtaacaggtaaatatatgggagttgggtatggggacgagaaaggtaaaatccgtccccacc----cccaatgccatgccta 271  Q
    ||||||||| ||||| |||||| || | ||||||||||||| | ||||||||| |||||||||||    ||||||||||||||||    
T  14892409 tagggtaacgggtaagtatatgagaatagggtatggggacggggaaggtaaaacccgtccccacccagtcccaatgccatgccta 14892325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 14902951 - 14902885
Alignment:
Q  22 catcatctctttgctggataatgcattacatcattgtgctcggcactaaaaaatacttttatttttat 89  Q
    |||| ||||||||||||||||||||||||  |||||  ||||| ||| ||||||||||||||||||||    
T  14902951 catcgtctctttgctggataatgcattaccacattgcactcgg-actgaaaaatacttttatttttat 14902885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 316
Target Start/End: Complemental strand, 28866721 - 28866678
Alignment:
Q  273 ctaaacaccctttttcaagggaaaaacagttcggtttatataat 316  Q
    ||||||||||||||| |||||||||||||||||| |||||||||    
T  28866721 ctaaacaccctttttaaagggaaaaacagttcggattatataat 28866678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 211
Target Start/End: Complemental strand, 32594674 - 32594579
Alignment:
Q  116 ggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatat 211  Q
    ||||||||||||||||||||||||| | | ||| | |  |||||||||| |||||||||||| | | |||| || ||||||||| ||||| |||||    
T  32594674 ggggatggggcggggatacccgaacccatcgggtacggggatgagattcaatttctcatccccgttgggtatgggtagggtaacgggtaagtatat 32594579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 89
Target Start/End: Original strand, 48538179 - 48538246
Alignment:
Q  22 catcatctctttgctggataatgcattacatcattgtgctcggcactaaaaaatacttttatttttat 89  Q
    |||||||| |||||| ||||||| |||||| |||| ||||||| |||  |||||||||||||||||||    
T  48538179 catcatctatttgctagataatgtattacaacattatgctcgggactgcaaaatacttttatttttat 48538246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 274 - 316
Target Start/End: Original strand, 34006329 - 34006371
Alignment:
Q  274 taaacaccctttttcaagggaaaaacagttcggtttatataat 316  Q
    ||||||||||||||||||||||||||||||| | |||||||||    
T  34006329 taaacaccctttttcaagggaaaaacagttcagattatataat 34006371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 107 - 176
Target Start/End: Original strand, 34060321 - 34060390
Alignment:
Q  107 tacggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatcc 176  Q
    ||||||||||||||||||| |||||||||||||| | |  |||| |  |||||||||| |||||||||||    
T  34060321 tacggggatggggatggggtggggatacccgaacccatcagggacggggatgagattcaatttctcatcc 34060390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 155 - 271
Target Start/End: Original strand, 35077553 - 35077670
Alignment:
Q  155 gatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttgggtatggggacgagaaaggtaaaatccgtccccac 254  Q
    |||||||||| |||||||||| | | | |||| || ||||||||||||||| ||||||||||  ||| ||| ||| | | |||  ||||||||||||| |    
T  35077553 gatgagattcaatttctcatctccgttgggtatgggtagggtaacaggtaagtatatgggagcaggggatgaggatggggaagacaaaatccgtcccccc 35077652  T
Q  255 -ccccaatgccatgccta 271  Q
     ||||| |||||||||||    
T  35077653 gccccattgccatgccta 35077670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 89
Target Start/End: Original strand, 42729220 - 42729289
Alignment:
Q  20 gacatcatctctttgctggataatgcattacatcattgtgctcggcactaaaaaatacttttatttttat 89  Q
    ||||||||||||||  |||||||||||||||| |||||   || | ||| ||||||||||||||||||||    
T  42729220 gacatcatctctttaatggataatgcattacaacattgcattcaggactgaaaaatacttttatttttat 42729289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 316
Target Start/End: Complemental strand, 3561427 - 3561383
Alignment:
Q  272 cctaaacaccctttttcaagggaaaaacagttcggtttatataat 316  Q
    |||||||||||||||||||||||||||| |||||  |||||||||    
T  3561427 cctaaacaccctttttcaagggaaaaacggttcgaattatataat 3561383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 316
Target Start/End: Complemental strand, 26723580 - 26723536
Alignment:
Q  272 cctaaacaccctttttcaagggaaaaacagttcggtttatataat 316  Q
    |||||||||||||||| ||||||||||| |||||| |||||||||    
T  26723580 cctaaacacccttttttaagggaaaaacggttcggattatataat 26723536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 175
Target Start/End: Complemental strand, 39616089 - 39616021
Alignment:
Q  107 tacggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatc 175  Q
    ||||||||||||||||||| ||||||| |||||| ||| ||||| |  |||||||||| ||||| ||||    
T  39616089 tacggggatggggatggggtggggatagccgaacccgtcggggacgtggatgagattcaatttcccatc 39616021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 125 - 212
Target Start/End: Original strand, 19572814 - 19572901
Alignment:
Q  125 gcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatg 212  Q
    |||||||||||| ||| ||| ||||| |  |||||||||| |||||||||||| | | |||| || ||||||||| ||||| ||||||    
T  19572814 gcggggatacccaaacccgtcggggacggggatgagattcaatttctcatccccgttgggtatgggtagggtaacgggtaagtatatg 19572901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 114 - 257
Target Start/End: Complemental strand, 38686433 - 38686290
Alignment:
Q  114 atggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgg 213  Q
    |||||||||| |  |||||||| |||| ||| ||||| |  |||||||||| |||||| ||||| | | | || || ||||||||| | ||||||||||     
T  38686433 atggggatggtgatgggatacctgaacccgtcggggacggggatgagattcaatttctgatccccgttggataagggtagggtaacggataaatatatga 38686334  T
Q  214 gagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    || |  || ||||||| | | ||||| |||||||||||||||||    
T  38686333 gaatcagggatggggatggggaaggtgaaatccgtccccacccc 38686290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 257
Target Start/End: Original strand, 3628324 - 3628426
Alignment:
Q  155 gatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttgggtatggggacgagaaaggtaaaatccgtccccac 254  Q
    |||||||||| |||||| ||||| | | |||| |||||||||||| ||||| |||| | || | | ||||||||||| | ||||||||| |||| || ||    
T  3628324 gatgagattcaatttcttatccccgttgggtatggatagggtaacgggtaagtatacgagaatcgtgtatggggacggggaaggtaaaacccgttcctac 3628423  T
Q  255 ccc 257  Q
    |||    
T  3628424 ccc 3628426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 257
Target Start/End: Complemental strand, 5180790 - 5180688
Alignment:
Q  155 gatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttgggtatggggacgagaaaggtaaaatccgtccccac 254  Q
    |||||||||| |||||||||||| | | | || || ||||||||  ||||| |||||| || | |||||| |||||| | |||||||||  |||||||||    
T  5180790 gatgagattcaatttctcatccccgttggatatgggtagggtaatgggtaagtatatgagaatcgggtatagggacggggaaggtaaaactcgtccccac 5180691  T
Q  255 ccc 257  Q
    |||    
T  5180690 ccc 5180688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 316
Target Start/End: Complemental strand, 6223826 - 6223784
Alignment:
Q  274 taaacaccctttttcaagggaaaaacagttcggtttatataat 316  Q
    |||||| |||||||||||| ||||||||||||| |||||||||    
T  6223826 taaacatcctttttcaaggtaaaaacagttcggattatataat 6223784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 229
Target Start/End: Complemental strand, 19892690 - 19892616
Alignment:
Q  155 gatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttgggtatgggga 229  Q
    |||||||||| |||||||||||| | || ||| || |||||||||| |||| |||||| |||| ||| |||||||    
T  19892690 gatgagattcaatttctcatccccgttatgtatgggtagggtaacaagtaagtatatgagagtaggggatgggga 19892616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 316
Target Start/End: Complemental strand, 24472913 - 24472875
Alignment:
Q  278 caccctttttcaagggaaaaacagttcggtttatataat 316  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  24472913 caccctttttcaagggaaaaacaattcggattatataat 24472875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 25563488 - 25563454
Alignment:
Q  282 ctttttcaagggaaaaacagttcggtttatataat 316  Q
    ||||||||||||||||||||||||| |||||||||    
T  25563488 ctttttcaagggaaaaacagttcggattatataat 25563454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 257
Target Start/End: Original strand, 34673608 - 34673710
Alignment:
Q  155 gatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttgggtatggggacgagaaaggtaaaatccgtccccac 254  Q
    |||||| ||| |||||||||||| | | | || || ||||||||| ||||| |||||| || | || |||||||| ||| || |||||| ||||||||||    
T  34673608 gatgaggttcaatttctcatccccgttggatatgggtagggtaacgggtaagtatatgagaatcggatatggggatgaggaatgtaaaacccgtccccac 34673707  T
Q  255 ccc 257  Q
    |||    
T  34673708 ccc 34673710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 257
Target Start/End: Complemental strand, 44792708 - 44792642
Alignment:
Q  191 tagggtaacaggtaaatatatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    ||||||||| ||||| |||||| || | ||||||||||||| | || |||||| |||||||||||||    
T  44792708 tagggtaacgggtaagtatatgagaatcgggtatggggacggggaatgtaaaacccgtccccacccc 44792642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 107 - 229
Target Start/End: Original strand, 50426956 - 50427077
Alignment:
Q  107 tacggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaa 206  Q
    |||||||||||||||| || |||||||||||||| |||  |||| |  |||||||||| |||||||||||  | |   || || ||||||||| |||||     
T  50426956 tacggggatggggatgaggtggggatacccgaacccgt-cgggacggggatgagattcaatttctcatcctcgttgaatatgggtagggtaacgggtaag 50427054  T
Q  207 tatatgggagttgggtatgggga 229  Q
    |||||| || | |||||||||||    
T  50427055 tatatgagaatcgggtatgggga 50427077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 231
Target Start/End: Original strand, 9983194 - 9983311
Alignment:
Q  114 atggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgg 213  Q
    ||||||||||||| ||||||||||||  ||| ||||| |  |||||| ||  |||| ||||||| ||| | || || ||||||||||||||| ||| ||     
T  9983194 atggggatggggcagggatacccgaatccgtcggggacggggatgaggttaaatttttcatccccgctggatatgggtagggtaacaggtaagtatgtga 9983293  T
Q  214 gagttgggtatggggacg 231  Q
    || | |||||||| ||||    
T  9983294 gaatcgggtatggagacg 9983311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 177
Target Start/End: Complemental strand, 29936191 - 29936134
Alignment:
Q  120 atggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccc 177  Q
    ||||||||||||||||||||| ||| ||||| |  |||| ||||| ||||||||||||    
T  29936191 atggggcggggatacccgaacccgtcggggacggggatgtgattcaatttctcatccc 29936134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 257
Target Start/End: Original strand, 41479563 - 41479628
Alignment:
Q  192 agggtaacaggtaaatatatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    |||||||||| ||| |||||| |||| | ||||||||||||| ||||| ||| || ||||||||||    
T  41479563 agggtaacagataagtatatgagagtagagtatggggacgaggaaggtgaaacccatccccacccc 41479628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 316
Target Start/End: Complemental strand, 32817702 - 32817659
Alignment:
Q  272 cctaaacaccctttttcaagggaaaaacagttcggtttatataat 316  Q
    ||||||||||||||||||| || |||||||||||| |||||||||    
T  32817702 cctaaacaccctttttcaa-ggtaaaacagttcggattatataat 32817659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 109 - 257
Target Start/End: Original strand, 44615779 - 44615927
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaata 208  Q
    |||||| |||||| | | ||| |||||||||| |||  |||| |  |||| | ||| |||||||||||| | ||  || || ||||||||| ||||| ||    
T  44615779 cggggacggggatagagtgggaatacccgaacccgtcagggacggggatggggttcaatttctcatccccgttaaatatgggtagggtaacgggtaagta 44615878  T
Q  209 tatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
     ||| || | ||||||||||||| | || |||||| |||||||||||||    
T  44615879 catgagaatcgggtatggggacggggaatgtaaaacccgtccccacccc 44615927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 61; Significance: 4e-26; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 109 - 257
Target Start/End: Original strand, 34301457 - 34301605
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaata 208  Q
    |||||| ||||||||||||||||||||||||| ||| ||||| |  |||| ||||| |||||||||||| | | |||| || ||||||||||||||| ||    
T  34301457 cggggacggggatggggcggggatacccgaacccgtcggggacggggatgggattcaatttctcatccccgttgggtatgggtagggtaacaggtaagta 34301556  T
Q  209 tatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    ||||  | | ||||||||||| | | ||||||||| |||||||||||||    
T  34301557 tatgataatcgggtatggggatggggaaggtaaaacccgtccccacccc 34301605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 104 - 258
Target Start/End: Original strand, 15068906 - 15069060
Alignment:
Q  104 cactacggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggt 203  Q
    |||||||||||||||||||||||||| |||||||||| | | ||||| |   ||||||||| |||||||||||| | | |||| || |||||||||||||    
T  15068906 cactacggggatggggatggggcgggaatacccgaacccattggggacgggaatgagattcaatttctcatccccgttgggtatgggtagggtaacaggt 15069005  T
Q  204 aaatatatgggagttgggtatggggacgagaaaggtaaaatccgtccccaccccc 258  Q
    || ||||||||||| ||| |||||||   | |||| |||| |||||||| |||||    
T  15069006 aagtatatgggagtaggggatggggattgggaaggcaaaaaccgtcccccccccc 15069060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 117 - 258
Target Start/End: Original strand, 6388876 - 6389017
Alignment:
Q  117 gggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggag 216  Q
    |||||||||| || ||| |||||| ||| ||||| |  |||||||||| |||||||||||| ||| | || || ||||||||||||||| |||||| |||    
T  6388876 gggatggggcaggaatatccgaacccgtcggggacggggatgagattcgatttctcatccccgctggatatgggtagggtaacaggtaagtatatgagag 6388975  T
Q  217 ttgggtatggggacgagaaaggtaaaatccgtccccaccccc 258  Q
    | | ||||||||||| | ||||||||| ||||||||||||||    
T  6388976 tagagtatggggacggggaaggtaaaacccgtccccaccccc 6389017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 116 - 273
Target Start/End: Original strand, 2076146 - 2076307
Alignment:
Q  116 ggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatggga 215  Q
    ||||||||||||| |||| |||||| ||| ||||| |  |||||||||| |||||||||||| | | |||| || ||||||||| ||||| |||||| ||    
T  2076146 ggggatggggcggagataaccgaacccgtcggggacggggatgagattcaatttctcatccccgttgggtatgggtagggtaacgggtaagtatatgaga 2076245  T
Q  216 gttgggtatggggacgagaaaggtaaaatccgtccccac----ccccaatgccatgcctacc 273  Q
     | ||||||||||||| | ||||||||| ||||||||||    ||||| |||||||||||||    
T  2076246 atcgggtatggggacggggaaggtaaaacccgtccccaccgcgccccattgccatgcctacc 2076307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 109 - 257
Target Start/End: Complemental strand, 32302845 - 32302697
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaata 208  Q
    |||||| ||||||||||||||||||||||||| ||| ||| | |  |||| ||||| |||||||||||  | | |||| || ||||||||| ||||| ||    
T  32302845 cggggacggggatggggcggggatacccgaacccgtcgggaacggggatgggattcaatttctcatcctcgttgggtatgggtagggtaacgggtaagta 32302746  T
Q  209 tatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    |||| || | ||||||||||||| | ||||||||| |||||||||||||    
T  32302745 tatgagaatcgggtatggggacggggaaggtaaaacccgtccccacccc 32302697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 116 - 257
Target Start/End: Original strand, 29109128 - 29109269
Alignment:
Q  116 ggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatggga 215  Q
    |||||||||||||||||||| |||| ||| || || |  |||||||||| ||||||||| ||   |||||| || ||||||||| |||||||||||| ||    
T  29109128 ggggatggggcggggataccagaacccgtcggagacggggatgagattcaatttctcatacccattaggtatgggtagggtaacgggtaaatatatgaga 29109227  T
Q  216 gttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
     | | ||||||| ||| | |||||||||||||||||||||||    
T  29109228 atcgagtatgggaacggggaaggtaaaatccgtccccacccc 29109269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 109 - 257
Target Start/End: Original strand, 28977417 - 28977565
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaata 208  Q
    |||||| ||||||||||||||||||||||||| ||| ||||| |  |||| ||||| |||||||||||| | | |||| || ||||||||||||||| ||    
T  28977417 cggggacggggatggggcggggatacccgaacccgttggggacgtggatgtgattcaatttctcatccccgttgggtatgggtagggtaacaggtaagta 28977516  T
Q  209 tatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    |||  || | ||||||||||||  | ||| |||||  ||||||||||||    
T  28977517 tataagaatcgggtatggggacagggaagataaaacacgtccccacccc 28977565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 110 - 253
Target Start/End: Original strand, 33633286 - 33633429
Alignment:
Q  110 ggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatat 209  Q
    |||||||||||||||| ||||||||| |||| ||| |||||    ||||  |||| |||||| ||||| | | |||| || |||||||||| |||| |||    
T  33633286 ggggatggggatggggtggggatacctgaacccgtcggggacagggatgcaattcgatttcttatccccgttgggtatgggtagggtaacatgtaagtat 33633385  T
Q  210 atgggagttgggtatggggacgagaaaggtaaaatccgtcccca 253  Q
     ||||||| ||||||||||||||| ||||||||| |||||||||    
T  33633386 ttgggagtagggtatggggacgaggaaggtaaaacccgtcccca 33633429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 257
Target Start/End: Original strand, 17084385 - 17084621
Alignment:
Q  20 gacatcatctctttgctggataatgcattacatcattgtgctcggcactaaaaaatacttttatttttatcnnnnnnnnttatccactacggggatgggg 119  Q
    |||| ||||| ||| ||||||||||||||||| ||||| |||||   |||||||| ||||||||||||||         ||||| | | ||||||||||     
T  17084385 gacaacatctttttactggataatgcattacaacattgcgctcgtggctaaaaaa-acttttatttttattaaaataaattatcgattgcggggatggga 17084483  T
Q  120 atggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttg 219  Q
    ||| | ||||||||||| ||| ||| | ||| |  ||||| |||| ||||||||||||   | |||| || | |||||||| ||||||| ||| |||| |    
T  17084484 atgagacggggatacccaaacccgtcgaggacggggatgaaattcgatttctcatccccaatgggtatgggttgggtaacatgtaaataaatgagagtag 17084583  T
Q  220 ggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    |||||||||| | | ||||||||| |||||||||||||    
T  17084584 ggtatggggatggggaaggtaaaacccgtccccacccc 17084621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 128 - 257
Target Start/End: Complemental strand, 24927715 - 24927586
Alignment:
Q  128 gggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttgggtatggg 227  Q
    ||||||||||||| ||| ||||| |  |||| ||||| |||||||||||| | | |||| || ||||||||| ||||| |||||| || | |||||||||    
T  24927715 gggatacccgaacccgtcggggacggggatgggattcaatttctcatccccgttgggtatgggtagggtaacgggtaagtatatgagaatcgggtatggg 24927616  T
Q  228 gacgagaaaggtaaaatccgtccccacccc 257  Q
    |||| | ||||||||| |||||||||||||    
T  24927615 gacggggaaggtaaaacccgtccccacccc 24927586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 117 - 257
Target Start/End: Original strand, 4231030 - 4231170
Alignment:
Q  117 gggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggag 216  Q
    |||||||||||||||||||||||| |||  ||||||  |||||||||| |||| | ||||| | | |||| || ||||||||| | ||| |||||| ||     
T  4231030 gggatggggcggggatacccgaacccgtctgggatggggatgagattcaatttattatccccgttgggtatgggtagggtaacggataattatatgagaa 4231129  T
Q  217 ttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    | |||||||||||||   ||||||||| |||||||||||||    
T  4231130 tcgggtatggggacggagaaggtaaaacccgtccccacccc 4231170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 109 - 257
Target Start/End: Complemental strand, 20399421 - 20399273
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaata 208  Q
    |||||| ||||||| ||| |||||| |||||| ||| ||||| |  |||| | ||| |||||||||||||| | |||| || || ||||| |||||| ||    
T  20399421 cggggacggggatgaggcagggataaccgaacccgtcggggacggggatggggttcaatttctcatccctgttgggtatgggtaaggtaataggtaagta 20399322  T
Q  209 tatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    |||| || ||||||||||||||||| || |||||| || ||||||||||    
T  20399321 tatgagaattgggtatggggacgaggaatgtaaaacccttccccacccc 20399273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 109 - 253
Target Start/End: Complemental strand, 34776247 - 34776103
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaata 208  Q
    |||||| ||||||| |||||||||| |||||| ||| ||||| |  |||||||||| |||||||||||| | | | || || |||| |||||||||||||    
T  34776247 cggggacggggatgaggcggggatatccgaacccgttggggacggggatgagattcaatttctcatccccgttggatatgggtaggttaacaggtaaata 34776148  T
Q  209 tatgggagttgggtatggggacgagaaaggtaaaatccgtcccca 253  Q
    |||| || | |||||||| || | | ||||||||| |||||||||    
T  34776147 tatgagaatcgggtatggagatggggaaggtaaaacccgtcccca 34776103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 112 - 257
Target Start/End: Original strand, 11255311 - 11255456
Alignment:
Q  112 ggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatat 211  Q
    |||||||||||||  |||||||||||||| ||| ||||| |  |||||||||| |||||||||||| | |  ||| |||||||||||| | ||| |||||    
T  11255311 ggatggggatgggatggggatacccgaacccgtcggggacggggatgagattcaatttctcatccccgttgagtatggatagggtaacggataagtatat 11255410  T
Q  212 gggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    | || ||  |||||| |||| | |||||||||  ||||||||||||    
T  11255411 gagaattatgtatggagacggggaaggtaaaacacgtccccacccc 11255456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 116 - 257
Target Start/End: Original strand, 39445872 - 39446013
Alignment:
Q  116 ggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatggga 215  Q
    |||||||||| |||||||||||||| ||| ||||| |  |||||||||| |||||||||||    |||||| || ||||||||| ||||| |||||| ||    
T  39445872 ggggatggggtggggatacccgaacccgtcggggacggggatgagattcaatttctcatcctcattaggtatgggtagggtaacgggtaagtatatgaga 39445971  T
Q  216 gttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
     |  ||||||||||||   |||||||||  ||||||||||||    
T  39445972 atcaggtatggggacggagaaggtaaaactcgtccccacccc 39446013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 230
Target Start/End: Complemental strand, 1063287 - 1063173
Alignment:
Q  116 ggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatggga 215  Q
    |||||||||| |||||||||||||| | | |||||||  |||||||||| |||||||||||| | | ||||  | ||||||||| ||||| |||||| ||    
T  1063287 ggggatggggtggggatacccgaacccatcggggatggggatgagattcaatttctcatccccgttgggtataggtagggtaacgggtaagtatatgaga 1063188  T
Q  216 gttgggtatggggac 230  Q
     | ||||||||||||    
T  1063187 atcgggtatggggac 1063173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 257
Target Start/End: Complemental strand, 17220456 - 17220354
Alignment:
Q  155 gatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttgggtatggggacgagaaaggtaaaatccgtccccac 254  Q
    |||| ||||| |||||||||||||| | | || |||||||||||| ||||| |||||| || | |||||||||||||   ||||||||| ||||||||||    
T  17220456 gatgggattcaatttctcatccctgttggatatggatagggtaacgggtaagtatatgagaatcgggtatggggacggagaaggtaaaacccgtccccac 17220357  T
Q  255 ccc 257  Q
    |||    
T  17220356 ccc 17220354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 257
Target Start/End: Complemental strand, 18151194 - 18151092
Alignment:
Q  155 gatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttgggtatggggacgagaaaggtaaaatccgtccccac 254  Q
    |||||| ||| |||||| |||||  |||| || ||||||| |||||||||| |||||| |||| ||||||||||||  | |||||||||| |||||||||    
T  18151194 gatgaggttcgatttctaatccccactagatatggataggctaacaggtaagtatatgagagtagggtatggggacagggaaggtaaaattcgtccccac 18151095  T
Q  255 ccc 257  Q
    |||    
T  18151094 ccc 18151092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 148 - 257
Target Start/End: Complemental strand, 27932181 - 27932072
Alignment:
Q  148 ggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttgggtatggggacgagaaaggtaaaatccg 247  Q
    |||||| |||| ||||| |||||||||||||  | | || || ||||||||| ||||| |||||| || | | ||||||||||||| ||||||||||||     
T  27932181 ggatgaggatgtgattcaatttctcatccctattggatatgggtagggtaacgggtaagtatatgagaatcgcgtatggggacgaggaaggtaaaatcca 27932082  T
Q  248 tccccacccc 257  Q
    ||||||||||    
T  27932081 tccccacccc 27932072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 259
Target Start/End: Complemental strand, 29918320 - 29918216
Alignment:
Q  155 gatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttgggtatggggacgagaaaggtaaaatccgtccccac 254  Q
    |||||||||  |||| ||||||| | |||||| |  |||||||||| |||||| || | |||| ||||||||||||||| || |||||| ||||||||||    
T  29918320 gatgagatttgatttatcatcccagttaggtatgagtagggtaacatgtaaatgtacgagagtagggtatggggacgaggaaagtaaaacccgtccccac 29918221  T
Q  255 cccca 259  Q
    |||||    
T  29918220 cccca 29918216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 199
Target Start/End: Complemental strand, 14687304 - 14687128
Alignment:
Q  22 catcatctctttgctggataatgcattacatcattgtgctcggcactaaaaaatacttttatttttatcnnnnnnnnttatccactacggggatggggat 121  Q
    |||||||||||| ||| ||||||||||||| |||||  |||||  | |||||||||||| | ||||||         |||||||||  |||| |||||||    
T  14687304 catcatctctttactgtataatgcattacaacattgcactcggggcaaaaaaatactttaaattttat-ttaaaaaattatccactgtggggttggggat 14687206  T
Q  122 ggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaac 199  Q
    | |   ||||||||||||| |||  |||| |  |||||||||| ||||||||||||||||  ||| ||||||||||||    
T  14687205 gagatagggatacccgaacccgtcagggacggggatgagattcgatttctcatccctgctgagtatggatagggtaac 14687128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 256
Target Start/End: Original strand, 24870372 - 24870473
Alignment:
Q  155 gatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttgggtatggggacgagaaaggtaaaatccgtccccac 254  Q
    |||||||||| |||||||||||| | | |||| || ||||||||| ||||| |||||| || | ||||||||||| ||| ||| ||||| ||| ||||||    
T  24870372 gatgagattcaatttctcatccccgttgggtatgggtagggtaacgggtaagtatatgagaatcgggtatggggatgaggaagataaaacccgcccccac 24870471  T
Q  255 cc 256  Q
    ||    
T  24870472 cc 24870473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 109 - 257
Target Start/End: Complemental strand, 17469041 - 17468893
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaata 208  Q
    |||||| ||||||||||| ||||||||||||| ||| |||||||| |||||  ||| |||| ||||||| | |   || || ||||||||| | ||| ||    
T  17469041 cggggacggggatggggcagggatacccgaacccgtcggggatgaggatgaagttcaatttatcatccccgttgaatatgggtagggtaacggataagta 17468942  T
Q  209 tatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    |||| || | ||||||||||||| | || ||||||  ||||| ||||||    
T  17468941 tatgagaatcgggtatggggacggggaatgtaaaactcgtcctcacccc 17468893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 257
Target Start/End: Complemental strand, 14186072 - 14185981
Alignment:
Q  166 atttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    |||||||||||| | |||||| |  ||||||||| ||||| |||||| || ||||||||||||||| | || ||||||  ||||||||||||    
T  14186072 atttctcatccccgttaggtatgtgtagggtaacgggtaagtatatgagaattgggtatggggacggggaatgtaaaactcgtccccacccc 14185981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 226
Target Start/End: Original strand, 15174171 - 15174293
Alignment:
Q  104 cactacggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggt 203  Q
    |||| |||||| |||||||||||||| |||||||||| | | ||||| |  ||| |||||| ||||||||||||   |   || || |||||||||||||    
T  15174171 cactgcggggacggggatggggcgggaatacccgaacccattggggacggggataagattcaatttctcatccccattgaatatgggtagggtaacaggt 15174270  T
Q  204 aaatatatgggagttgggtatgg 226  Q
    || ||||||||||| ||| ||||    
T  15174271 aagtatatgggagtcggggatgg 15174293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 257
Target Start/End: Original strand, 27058679 - 27058781
Alignment:
Q  155 gatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttgggtatggggacgagaaaggtaaaatccgtccccac 254  Q
    ||||||||||||||||||| ||| | | | || || ||||||||| ||||| |||||| || | | ||||||||||| |  |||||||| ||||||||||    
T  27058679 gatgagattctatttctcacccccgttggatatgggtagggtaacgggtaagtatatgagaatagagtatggggacgggggaggtaaaacccgtccccac 27058778  T
Q  255 ccc 257  Q
    |||    
T  27058779 ccc 27058781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 89
Target Start/End: Original strand, 8545627 - 8545695
Alignment:
Q  22 catcatctctttgctggataatgcattacatcattgtgctc-ggcactaaaaaatacttttatttttat 89  Q
    ||||||||||||| |||||||||||||||| ||||  |||| ||  || ||||||||||||||||||||    
T  8545627 catcatctctttgttggataatgcattacaacattacgctcgggggctgaaaaatacttttatttttat 8545695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 316
Target Start/End: Original strand, 40392607 - 40392647
Alignment:
Q  276 aacaccctttttcaagggaaaaacagttcggtttatataat 316  Q
    ||||||| ||||||||||||||||||||||| |||||||||    
T  40392607 aacacccgttttcaagggaaaaacagttcggattatataat 40392647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 36132227 - 36132286
Alignment:
Q  118 ggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccc 177  Q
    ||||||||||| |||||||||||  || |||||||  |||||||||| ||||||||||||    
T  36132227 ggatggggcggagatacccgaacctgtcggggatgtggatgagattcaatttctcatccc 36132286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 39379854 - 39379893
Alignment:
Q  20 gacatcatctctttgctggataatgcattacatcattgtg 59  Q
    ||||||||||||||| |||||||||||||||| |||||||    
T  39379854 gacatcatctctttgttggataatgcattacaacattgtg 39379893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 9476283 - 9476349
Alignment:
Q  23 atcatctctttgctggataatgcattacatcattgtgctcggcactaaaaaatacttttatttttat 89  Q
    ||||||||| | ||||||||||||||||| || || |||||| ||| ||||||| | ||||||||||    
T  9476283 atcatctctgtcctggataatgcattacaacactgcgctcgggactgaaaaataatcttatttttat 9476349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 257
Target Start/End: Complemental strand, 31323610 - 31323506
Alignment:
Q  155 gatgagattctatttctcatccctgctaggtacggata--gggtaacaggtaaatatatgggagttgggtatggggacgagaaaggtaaaatccgtcccc 252  Q
    |||| ||||| ||||||||||| || | |||| |||||  ||||||  ||||| |||||| || | ||||||| | ||| | ||||||||||||||||||    
T  31323610 gatgggattcaatttctcatccttgttgggtatggatatagggtaaagggtaagtatatgagaatcgggtatgagaacggggaaggtaaaatccgtcccc 31323511  T
Q  253 acccc 257  Q
    |||||    
T  31323510 acccc 31323506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 316
Target Start/End: Original strand, 36317858 - 36317903
Alignment:
Q  272 cctaaacaccc-tttttcaagggaaaaacagttcggtttatataat 316  Q
    ||||||||||| ||||| |||||||||||||||||| |||||||||    
T  36317858 cctaaacacccattttttaagggaaaaacagttcggattatataat 36317903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 316
Target Start/End: Complemental strand, 4259727 - 4259683
Alignment:
Q  272 cctaaacaccctttttcaagggaaaaacagttcggtttatataat 316  Q
    |||||||||| |||||||||||||||| | ||||| |||||||||    
T  4259727 cctaaacaccatttttcaagggaaaaataattcggattatataat 4259683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 107 - 223
Target Start/End: Original strand, 4280242 - 4280358
Alignment:
Q  107 tacggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaa 206  Q
    ||||| ||||| ||||||||||||||||| |||   ||  ||||||| ||||| ||| ||||| |||||| || | |||| || |||||||||| ||||     
T  4280242 tacggagatggagatggggcggggatacctgaaactgtccgggatgaggatgacattttatttttcatccatgttgggtatgggtagggtaacatgtaag 4280341  T
Q  207 tatatgggagttgggta 223  Q
    ||| ||| ||| |||||    
T  4280342 tatttggaagtagggta 4280358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 90
Target Start/End: Original strand, 6388787 - 6388851
Alignment:
Q  26 atctctttgctggataatgcattacatcattgtgctcggcactaaaaaatacttttatttttatc 90  Q
    |||| ||||||||||||||||||||| ||||| ||||||   |  ||||||||||||||| ||||    
T  6388787 atctttttgctggataatgcattacaacattgcgctcggggatgcaaaatacttttatttctatc 6388851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 316
Target Start/End: Complemental strand, 42280982 - 42280939
Alignment:
Q  272 cctaaacaccctttttcaagggaaaaacagttcggtttatataat 316  Q
    ||||||||||||||||||| || |||||||||||| |||||||||    
T  42280982 cctaaacaccctttttcaa-ggtaaaacagttcggattatataat 42280939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 316
Target Start/End: Original strand, 44106291 - 44106334
Alignment:
Q  272 cctaaacaccctttttcaagggaaaaacagttcggtttatataat 316  Q
    ||||||||||||||||||| || |||||||||||| |||||||||    
T  44106291 cctaaacaccctttttcaa-ggtaaaacagttcggattatataat 44106334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 4e-26; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 109 - 257
Target Start/End: Original strand, 47550657 - 47550805
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaata 208  Q
    |||||| ||||||||||||||||||||||||  ||| |||||  |  ||||||||| |||||||||||| | | |||| |||||||||||| ||||| ||    
T  47550657 cggggacggggatggggcggggatacccgaatccgtcggggacaagaatgagattcaatttctcatccccgttgggtatggatagggtaacgggtaagta 47550756  T
Q  209 tatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    || | || | ||||||||||||| | ||||||||| |||||||||||||    
T  47550757 tacgagaatcgggtatggggacggggaaggtaaaacccgtccccacccc 47550805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 230
Target Start/End: Original strand, 25265432 - 25265632
Alignment:
Q  29 tctttgctggataatgcattacatcattgtgctcggcactaaaaaatacttttatttttatcnnnnnnnnttatccactacggggatggggatggggcgg 128  Q
    ||||||||||||||||||||||| ||||| |||||   |||||||||||||||||||||||          || |||||  ||| |||||||||||||||    
T  25265432 tctttgctggataatgcattacaacattgcgctcgaagctaaaaaatacttttatttttatttaaaaaaaataaccactgtggg-atggggatggggcgg 25265530  T
Q  129 ggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttgggtatgggg 228  Q
    |||||||||||| ||  ||| | |  |||| ||||| |||||||||||| ||| |||| || | ||||||| ||||| ||||||||||| | ||||||||    
T  25265531 ggatacccgaacccgccgggtacggggatgggattccatttctcatccccgctgggtatgggttgggtaactggtaagtatatgggagtagagtatgggg 25265630  T
Q  229 ac 230  Q
    ||    
T  25265631 ac 25265632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 120 - 257
Target Start/End: Original strand, 31918875 - 31919012
Alignment:
Q  120 atggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttg 219  Q
    ||||||||||||||||||||| | | ||||| |  |||| ||||| |||||||||||| | | |||| |||||||||||| ||||| |||||| || | |    
T  31918875 atggggcggggatacccgaacccatcggggacggggatgggattcaatttctcatccccgttgggtatggatagggtaacgggtaagtatatgagaatcg 31918974  T
Q  220 ggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    |||||||||||| | ||||||||| |||||||||||||    
T  31918975 ggtatggggacggggaaggtaaaacccgtccccacccc 31919012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 109 - 257
Target Start/End: Original strand, 6382578 - 6382726
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaata 208  Q
    |||||| ||||||||||||||||||||||||| ||| ||||| |  |||||||||| |||||||||||| | | | || || ||||||||| ||||| ||    
T  6382578 cggggacggggatggggcggggatacccgaacccgttggggacggggatgagattcaatttctcatccccgttggatatgggtagggtaacgggtaagta 6382677  T
Q  209 tatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    |||| || | |||||||||| || | ||||||||| | |||||||||||    
T  6382678 tatgagaatcgggtatgggggcggggaaggtaaaaccggtccccacccc 6382726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 109 - 257
Target Start/End: Complemental strand, 7608761 - 7608613
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaata 208  Q
    |||||| |||||||| |||||||||||||||| | | ||||| |  |||| ||||| |||||||||||| | | | || || ||||||||||||||| ||    
T  7608761 cggggacggggatggtgcggggatacccgaacccctcggggacggggatgggattcaatttctcatccccgttggatatgggtagggtaacaggtaagta 7608662  T
Q  209 tatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    |||| || | ||||||||||||| | ||||||||| |||||||||||||    
T  7608661 tatgagaatcgggtatggggacggggaaggtaaaacccgtccccacccc 7608613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 107 - 257
Target Start/End: Complemental strand, 26564624 - 26564474
Alignment:
Q  107 tacggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaa 206  Q
    |||||||||| |||||||| || ||||||||||| ||| ||||| | ||||||||||| |||||||||||  | | | || || |||||||||||||||     
T  26564624 tacggggatgaggatggggtggagatacccgaacccgttggggacggagatgagattcaatttctcatcctcgttggatatgggtagggtaacaggtaag 26564525  T
Q  207 tatatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    |||||| || |  |||||| ||||| |||| |||||| |||||||||||||    
T  26564524 tatatgagaatcaggtatgaggacgggaaatgtaaaacccgtccccacccc 26564474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 126 - 271
Target Start/End: Complemental strand, 44317318 - 44317172
Alignment:
Q  126 cggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttgggtatg 225  Q
    ||||||||||||||| ||| |||||||  |||| ||||| |||||||||||| | |  ||| || ||||||||||||||| |||||| || | |||||||    
T  44317318 cggggatacccgaacccgtcggggatggggatgggattcaatttctcatccccgttgagtatgggtagggtaacaggtaagtatatgagaatcgggtatg 44317219  T
Q  226 gggacgagaaaggtaaaatccgtccccaccccc-aatgccatgccta 271  Q
    |||||| | ||||||||| |||||||| ||||| | |||||||||||    
T  44317218 gggacggggaaggtaaaacccgtcccccccccctattgccatgccta 44317172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 109 - 257
Target Start/End: Original strand, 55826927 - 55827075
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaata 208  Q
    |||||| |||||||| |||||||||||||||| ||| ||||| |  |||||||||| ||||||||||||   | | || || ||||||||||| ||| ||    
T  55826927 cggggacggggatggagcggggatacccgaacccgtcggggacggggatgagattcaatttctcatccccattggatatgggtagggtaacagataagta 55827026  T
Q  209 tatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    |||| || |  |||||||||||| | ||||||||| |||||||||||||    
T  55827027 tatgagaatccggtatggggacggggaaggtaaaacccgtccccacccc 55827075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 128 - 257
Target Start/End: Original strand, 15987552 - 15987681
Alignment:
Q  128 gggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttgggtatggg 227  Q
    ||||||||||||| ||| ||||| |  |||||||||| |||||||||||| | | | || || ||||||||||||||| |||||| || | | |||||||    
T  15987552 gggatacccgaacccgtcggggacggggatgagattcaatttctcatccccgttggatatgggtagggtaacaggtaagtatatgagaatcgagtatggg 15987651  T
Q  228 gacgagaaaggtaaaatccgtccccacccc 257  Q
    |||||| |||||||||  ||||||||||||    
T  15987652 gacgaggaaggtaaaactcgtccccacccc 15987681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 100 - 257
Target Start/End: Complemental strand, 36918865 - 36918708
Alignment:
Q  100 tatccactacggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaac 199  Q
    |||||| | ||||||||| ||||||||| | |||||||||| ||  |||||  | ||||  |||| |||||||||||| ||| | || ||| ||||||||    
T  36918865 tatccattgcggggatggagatggggcgagaatacccgaacccggcggggacaaggatggaattcaatttctcatccccgctggatatggacagggtaac 36918766  T
Q  200 aggtaaatatatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    |||||| |||||| |||| ||||||||||||| | |||||||||  | ||||||||||    
T  36918765 aggtaagtatatgagagtagggtatggggacggggaaggtaaaactcatccccacccc 36918708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 28 - 243
Target Start/End: Original strand, 8844072 - 8844281
Alignment:
Q  28 ctctttgctggataatgcattacatcattgtgctcggcactaaaaaatacttttatttttatcnnnnnnnnttatccactacggggatggggatggggcg 127  Q
    |||||||||||||||||||||||| ||||| |||||| |||  ||||||||||||| |||||          |||||| | |||||||| ||      ||    
T  8844072 ctctttgctggataatgcattacaacattgcgctcgggactgcaaaatacttttatatttataaaaaaaatatatccattgcggggatgagg------cg 8844165  T
Q  128 gggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttgggtatggg 227  Q
    || |||||||||| |||  |||| |  |||||||||  |||||||||||| ||| | ||||||||||||||| | ||| ||||||||| | |||||||||    
T  8844166 ggaatacccgaacccgtcagggacggggatgagatttgatttctcatccccgctggctacggatagggtaactgataagtatatgggattagggtatggg 8844265  T
Q  228 gacgagaaaggtaaaa 243  Q
    |||| | |||||||||    
T  8844266 gacggggaaggtaaaa 8844281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 28 - 243
Target Start/End: Original strand, 8857036 - 8857245
Alignment:
Q  28 ctctttgctggataatgcattacatcattgtgctcggcactaaaaaatacttttatttttatcnnnnnnnnttatccactacggggatggggatggggcg 127  Q
    |||||||||||||||||||||||| ||||| |||||| |||  ||||||||||||| |||||          |||||| | |||||||| ||      ||    
T  8857036 ctctttgctggataatgcattacaacattgcgctcgggactgcaaaatacttttatatttataaaaaaaatatatccattgcggggatgagg------cg 8857129  T
Q  128 gggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttgggtatggg 227  Q
    || |||||||||| |||  |||| |  |||||||||  |||||||||||| ||| | ||||||||||||||| | ||| ||||||||| | |||||||||    
T  8857130 ggaatacccgaacccgtcagggacggggatgagatttgatttctcatccccgctggctacggatagggtaactgataagtatatgggattagggtatggg 8857229  T
Q  228 gacgagaaaggtaaaa 243  Q
    |||| | |||||||||    
T  8857230 gacggggaaggtaaaa 8857245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 109 - 257
Target Start/End: Complemental strand, 37348914 - 37348766
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaata 208  Q
    |||||| ||||||| ||||||||||||||||| ||| ||||| || |||||  ||| |||||||||||| | | |||| || ||||||||||||||| ||    
T  37348914 cggggacggggatgaggcggggatacccgaacccgtcggggacgaggatgaagttcaatttctcatccccgttgggtatgggtagggtaacaggtaagta 37348815  T
Q  209 tatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    || | || | |||||||||||||   || |||||| ||||||| |||||    
T  37348814 taagagaatcgggtatggggacggagaatgtaaaacccgtccctacccc 37348766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 257
Target Start/End: Complemental strand, 10287054 - 10286911
Alignment:
Q  114 atggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgg 213  Q
    ||||||||||||  |||||  |||||| ||| ||||| |  ||||||||| ||||||||||||| | | |||| |||||||||||| ||||| |||||      
T  10287054 atggggatggggatgggatctccgaacccgtcggggacggggatgagattatatttctcatccccgttgggtatggatagggtaacgggtaagtatatta 10286955  T
Q  214 gagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    || | ||||||||||||| |  |||||||| |||||||||||||    
T  10286954 gaatagggtatggggacgggggaggtaaaacccgtccccacccc 10286911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 118 - 257
Target Start/End: Original strand, 11123180 - 11123319
Alignment:
Q  118 ggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagt 217  Q
    ||||||||||||||||||||||| ||| ||||| |  |||| ||||| |||| ||||| | | | | || || ||||||||||||||| |||||| || |    
T  11123180 ggatggggcggggatacccgaacccgtcggggacggggatgtgattcaatttatcatctccgttggatatgggtagggtaacaggtaagtatatgagaat 11123279  T
Q  218 tgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
     ||||||||| ||| | ||||||||| |||||||||||||    
T  11123280 cgggtatgggaacggggaaggtaaaacccgtccccacccc 11123319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 217
Target Start/End: Complemental strand, 37926373 - 37926183
Alignment:
Q  26 atctctttgctggataatgcattacatcattgtgctcggcactaaaaaatacttttatttttatcnnnnnnnnttatccactacggggatggggatgggg 125  Q
    ||||||||||| |||||||||||||| ||||| |||| | |||||||||||||||||||| | |         ||||||||| || ||||| |||||||     
T  37926373 atctctttgctagataatgcattacaacattgcgctcaggactaaaaaatacttttatttat-tttaaaaaaattatccactgcgaggatgaggatgggt 37926275  T
Q  126 cggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagt 217  Q
    ||||||||||||||| ||| ||  | || ||||| |||| ||||||||||||| || | || || || |||||||| ||| |||||| ||||    
T  37926274 cggggatacccgaacccgtcggaaacgaggatgatattcgatttctcatccctactggatatgggtaaggtaacagataagtatatgagagt 37926183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 104 - 257
Target Start/End: Original strand, 16216973 - 16217120
Alignment:
Q  104 cactacggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggt 203  Q
    ||||||||||| ||||||||||||||||||||||||| ||| |||      |||| ||||| |||||||||||| | | |||| || ||||||||| |||    
T  16216973 cactacggggacggggatggggcggggatacccgaacccgtcggg------gatgggattcaatttctcatccccgttgggtatgggtagggtaacgggt 16217066  T
Q  204 aaatatatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    || |||||| || | || |||||||||| | ||||||||| || ||| ||||||    
T  16217067 aagtatatgagaatcggatatggggacggggaaggtaaaacccttccgcacccc 16217120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 115 - 212
Target Start/End: Original strand, 12075999 - 12076095
Alignment:
Q  115 tggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatg 212  Q
    ||||||||||||||||||||||||||||||  ||||||| |||||||||| |||||||||||| | | ||||  |||||||||| | |||| ||||||    
T  12075999 tggggatggggcggggatacccgaactcgt-cgggatgaggatgagattcaatttctcatccccgttgggtatagatagggtaatatgtaactatatg 12076095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 113 - 257
Target Start/End: Complemental strand, 30034423 - 30034278
Alignment:
Q  113 gatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacag-gtaaatatat 211  Q
    |||||||||||||| ||||||||| ||| ||| || ||||  |||||||||| |||||||||| ||||| | |  |||||| ||||  | |||| ||| |    
T  30034423 gatggggatggggcagggatacccaaacccgtcggtgatggggatgagattcgatttctcatctctgctggatttggatagtgtaatggagtaagtatgt 30034324  T
Q  212 gggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    | |||| ||||||||||||| | ||||||||| |||||||||||||    
T  30034323 gagagtagggtatggggacgtggaaggtaaaacccgtccccacccc 30034278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 109 - 257
Target Start/End: Original strand, 4766619 - 4766767
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaata 208  Q
    |||| ||||||||| |||  |||||||||||| |||   ||| |  |||||||||| |||||||||| | | | |||| |||||||||||||||||| ||    
T  4766619 cgggaatggggatgaggcaaggatacccgaacccgtcaaggacggggatgagattcaatttctcatctccgttgggtatggatagggtaacaggtaagta 4766718  T
Q  209 tatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    |||| || | || |||||||||| | |||||||||  ||||||||||||    
T  4766719 tatgagaatcggatatggggacggggaaggtaaaacacgtccccacccc 4766767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 109 - 257
Target Start/End: Original strand, 5902918 - 5903066
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaata 208  Q
    |||||| || |||||||||||||||||||||| |||  |||| |  |||| ||||| |||||||||||  | | | || || ||||||||| ||||| ||    
T  5902918 cggggacggagatggggcggggatacccgaacccgtcagggacggggatgggattcaatttctcatcctcgttggatatgggtagggtaacgggtaagta 5903017  T
Q  209 tatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    |||| || | ||||||||||| | | ||||||||| |||||||||||||    
T  5903018 tatgagaatcgggtatggggatggggaaggtaaaacccgtccccacccc 5903066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 109 - 257
Target Start/End: Complemental strand, 11027863 - 11027715
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaata 208  Q
    |||||| ||||||| |||||||||||||||||  || ||||| |  |||||||||| |||||||||||| |   |||| || |||||||||  |||| ||    
T  11027863 cggggacggggatgaggcggggatacccgaacctgtcggggacggggatgagattcaatttctcatccccgtagggtatgggtagggtaacgagtaagta 11027764  T
Q  209 tatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    |||| || |  |||||| ||||| | ||||||||| |||||||||||||    
T  11027763 tatgagaatcaggtatgaggacggggaaggtaaaacccgtccccacccc 11027715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 116 - 257
Target Start/End: Complemental strand, 48459270 - 48459129
Alignment:
Q  116 ggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatggga 215  Q
    |||||||||| |||||||||||||| | | ||||| |  |||||||||| |||||||||||| | |  ||| |  ||||||||| ||||| |||||| ||    
T  48459270 ggggatggggtggggatacccgaacccattggggacggggatgagattcaatttctcatccccgttgagtatgagtagggtaacgggtaagtatatgaga 48459171  T
Q  216 gttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
     | ||||||||||| |   ||||||||| |||||||||||||    
T  48459170 atcgggtatggggatggagaaggtaaaacccgtccccacccc 48459129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 273 - 317
Target Start/End: Original strand, 37222037 - 37222081
Alignment:
Q  273 ctaaacaccctttttcaagggaaaaacagttcggtttatataatt 317  Q
    |||||||||||||||||||||||||||||||||| ||||||||||    
T  37222037 ctaaacaccctttttcaagggaaaaacagttcggattatataatt 37222081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 110 - 257
Target Start/End: Original strand, 1724615 - 1724762
Alignment:
Q  110 ggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatat 209  Q
    ||||| ||||||| ||||||||||||| ||| |||  |||| |  |||||| ||| |||||||||||| | | |||| || ||||||||| | |||||||    
T  1724615 ggggacggggatgaggcggggatacccaaacccgtcagggacggggatgaggttcaatttctcatccccgttgggtatgggtagggtaacggataaatat 1724714  T
Q  210 atgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    ||| || | |||||| |||||| | || | |||| |||||||||||||    
T  1724715 atgagaatcgggtattgggacggggaatgcaaaacccgtccccacccc 1724762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 111 - 257
Target Start/End: Complemental strand, 21423650 - 21423504
Alignment:
Q  111 gggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatata 210  Q
    |||| ||||||||||| |||||||||||||   | ||||| |   |||| |||| |||||| ||||||| |  ||| |  ||||||||| ||||| ||||    
T  21423650 gggacggggatggggcagggatacccgaacctatcggggacgggaatgaaattcaatttcttatccctgttgtgtatgagtagggtaacgggtaagtata 21423551  T
Q  211 tgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    || || | |||||||||||||||||| |||||| | |||||||||||    
T  21423550 tgagaatcgggtatggggacgagaaatgtaaaacctgtccccacccc 21423504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 155 - 257
Target Start/End: Complemental strand, 44887651 - 44887549
Alignment:
Q  155 gatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttgggtatggggacgagaaaggtaaaatccgtccccac 254  Q
    |||||||||| ||||||||||||   | | || |||||||||||||||||| |||||| || | ||||||| ||||  | |||||||||||| |||||||    
T  44887651 gatgagattcaatttctcatccccattggatatggatagggtaacaggtaagtatatgagaatcgggtatgaggacagggaaggtaaaatccatccccac 44887552  T
Q  255 ccc 257  Q
    |||    
T  44887551 ccc 44887549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 99 - 239
Target Start/End: Original strand, 19549254 - 19549394
Alignment:
Q  99 ttatccactacggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaa 198  Q
    ||||||| | |||||||  |||||| |||||| ||||||||  ||| ||||| |  |||||||||| ||||||| | || | | |||| || ||||||||    
T  19549254 ttatccattgcggggataaggatggagcggggctacccgaatccgtcggggacggggatgagattcgatttctctttcccgttgggtatgggtagggtaa 19549353  T
Q  199 caggtaaatatatgggagttgggtatggggacgagaaaggt 239  Q
      ||||| ||| || |||| |||||||||||||||||||||    
T  19549354 atggtaagtatttgagagtggggtatggggacgagaaaggt 19549394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 104 - 256
Target Start/End: Complemental strand, 21544352 - 21544200
Alignment:
Q  104 cactacggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggt 203  Q
    |||| |||||| ||||||| || ||| |||||||||||  | ||||| | |||| |||||| |||||||||||| | | |||| || || |||||||| |    
T  21544352 cactgcggggacggggatgtggtgggaatacccgaacttattggggacggagattagattcaatttctcatccccgttgggtatgggtaaggtaacagct 21544253  T
Q  204 aaatatatgggagttgggtatggggacgagaaaggtaaaatccgtccccaccc 256  Q
    || ||||||| ||| ||| |||| || | | |||| |||| ||||||||||||    
T  21544252 aagtatatggaagtaggggatggagatggggaaggcaaaacccgtccccaccc 21544200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 26 - 198
Target Start/End: Original strand, 33616398 - 33616569
Alignment:
Q  26 atctctttgctggataatgcattacatcattgtgctcggcactaaaaaatacttttatttttatcnnnnnnnnttatccactacggggatggggatgggg 125  Q
    |||| |||||| |||||||||||||| ||||||||||||   | |||||||||| |||||||||         |||||  || |||||||||||||| ||    
T  33616398 atctttttgctcgataatgcattacaacattgtgctcggggatgaaaaatacttatatttttat-ttaaaatattatcggctgcggggatggggatgagg 33616496  T
Q  126 cggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaa 198  Q
    |||||||| ||| || ||| ||||| ||  ||| | ||| ||||| |||||||||| |||| || ||||||||    
T  33616497 cggggatatccggacccgtcggggaagagtatgtgtttcgatttcccatccctgctgggtatgggtagggtaa 33616569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 99 - 243
Target Start/End: Original strand, 40420926 - 40421070
Alignment:
Q  99 ttatccactacggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaa 198  Q
    |||||||||||||||||| | ||| |||| |||||| ||||| |||  ||||    |||||| ||| ||||||||||||||||  | | || | ||||||    
T  40420926 ttatccactacggggatgcgtatgaggcgaggatactcgaacccgtcagggacagggatgagtttcgatttctcatccctgctgagaatgggtggggtaa 40421025  T
Q  199 caggtaaatatatgggagttgggtatggggacgagaaaggtaaaa 243  Q
    ||||||| ||||||  ||| |||||||  |||| |||||||||||    
T  40421026 caggtaattatatgaaagtagggtatgaagacgggaaaggtaaaa 40421070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 257
Target Start/End: Original strand, 6482346 - 6482477
Alignment:
Q  126 cggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttgggtatg 225  Q
    ||||||||||||||||||| || || |   ||||| ||| |||||||||||| | | | || || ||||||||| ||||| |||||| || | |||||||    
T  6482346 cggggatacccgaactcgtcggagacgggcatgaggttcaatttctcatccccgttggatatgggtagggtaacgggtaagtatatgagaatcgggtatg 6482445  T
Q  226 gggacgagaaaggtaaaatccgtccccacccc 257  Q
    || ||| | || |||||| |||||||||||||    
T  6482446 ggaacggggaatgtaaaacccgtccccacccc 6482477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 42907699 - 42907636
Alignment:
Q  26 atctctttgctggataatgcattacatcattgtgctcggcactaaaaaatacttttatttttat 89  Q
    |||||||||||| ||||||||||||| ||||  ||||||  |||||||||| ||||||||||||    
T  42907699 atctctttgctgaataatgcattacaacattacgctcggatctaaaaaataattttatttttat 42907636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 134 - 253
Target Start/End: Complemental strand, 43892277 - 43892158
Alignment:
Q  134 cccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttgggtatggggacgag 233  Q
    ||||||| ||| ||||| |  |||||||||| |||||||||||| | | | || || || |||||  ||||| |||||| || |||||||||| |||| |    
T  43892277 cccgaacccgtcggggacggggatgagattcaatttctcatccccgttggatatgggtaaggtaatgggtaagtatatgagaattgggtatggagacggg 43892178  T
Q  234 aaaggtaaaatccgtcccca 253  Q
     |||||||||||||||||||    
T  43892177 gaaggtaaaatccgtcccca 43892158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 257
Target Start/End: Original strand, 39772111 - 39772172
Alignment:
Q  195 gtaacaggtaaatatatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    ||||||||||| |||||| |||| ||||||||||||| |||| |||||||||||| |||||||    
T  39772111 gtaacaggtaagtatatgagagtagggtatggggacgggaaa-gtaaaatccgtctccacccc 39772172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 177
Target Start/End: Original strand, 7334467 - 7334619
Alignment:
Q  27 tctctttgctggataatgcattacatc--attgtgctcggcactaaaaaatacttttatttttatcnnnnnnnnttatccactacggggatggggatggg 124  Q
    |||||||| |||||||||||||||| |  |||||| ||||  |  ||||||||||||||||||||          ||| || ||||||||||| ||||||    
T  7334467 tctctttgttggataatgcattacaacgcattgtgttcggggcagaaaaatacttttatttttatttaaaaaatatattcattacggggatggagatggg 7334566  T
Q  125 gcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccc 177  Q
    || |||| || ||||| ||| |||||   ||||||||||| ||||||||||||    
T  7334567 gctgggagactcgaacccgtcggggacagagatgagattcgatttctcatccc 7334619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 17113285 - 17113338
Alignment:
Q  26 atctctttgctggataatgcattacatcattgtgctcggcactaaaaaatactt 79  Q
    ||||||||| || ||||||||||||| ||||||||||||  |||||||||||||    
T  17113285 atctctttgttgaataatgcattacaacattgtgctcggggctaaaaaatactt 17113338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 116 - 257
Target Start/End: Complemental strand, 39046741 - 39046600
Alignment:
Q  116 ggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatggga 215  Q
    |||||||||| || ||||||||||| ||| ||||| |  |||  ||||| |||||||||||| | | | ||  | |||| ||||  |||| |||||  ||    
T  39046741 ggggatggggtggagatacccgaacccgtcggggacggggatacgattcaatttctcatccccgttggatataggtaggataacgagtaagtatataaga 39046642  T
Q  216 gttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
     | ||||||||||||| ||||||||||| |||||||||||||    
T  39046641 atcgggtatggggacgggaaaggtaaaacccgtccccacccc 39046600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 155 - 271
Target Start/End: Original strand, 47239735 - 47239849
Alignment:
Q  155 gatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttgggtatggggacgagaaaggtaaaatccgtccccac 254  Q
    |||||||||| |||||||||||| | | | || |||||||||||| | |||||||||| || | || |||||||||| | ||||||||  ||  |||| |    
T  47239735 gatgagattcaatttctcatccccgtttgatatggatagggtaacggataaatatatgagaatcggatatggggacggggaaggtaaa--cccccccccc 47239832  T
Q  255 ccccaatgccatgccta 271  Q
    ||||| |||||||||||    
T  47239833 ccccattgccatgccta 47239849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 320
Target Start/End: Complemental strand, 3703341 - 3703293
Alignment:
Q  272 cctaaacaccctttttcaagggaaaaacagttcggtttatataattcaa 320  Q
    |||||||||| |||||||||||||||||||||  | |||||||||||||    
T  3703341 cctaaacaccatttttcaagggaaaaacagttatggttatataattcaa 3703293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 88
Target Start/End: Complemental strand, 39085967 - 39085903
Alignment:
Q  24 tcatctctttgctggataatgcattacatcattgtgctcggcactaaaaaatacttttattttta 88  Q
    ||||||||||| |||||||||||||||| |||||   | || ||| |||||||||||||||||||    
T  39085967 tcatctctttgttggataatgcattacaacattgcaattgggactgaaaaatacttttattttta 39085903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 166 - 257
Target Start/End: Complemental strand, 3737531 - 3737440
Alignment:
Q  166 atttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    |||||||||||  | |||||| || ||||||||| |||||||||||| || |  |||||||||| |   ||||||||| |||||||||||||    
T  3737531 atttctcatcctcgttaggtatgggtagggtaacgggtaaatatatgagaatatggtatggggatggagaaggtaaaacccgtccccacccc 3737440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 102 - 229
Target Start/End: Original strand, 4741553 - 4741679
Alignment:
Q  102 tccactacggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacag 201  Q
    |||||||| | || |||||||||||| ||||||| ||||  || |||||||  |||||||||| |||||||||||||| ||  || || ||||||| |      
T  4741553 tccactacagagagggggatggggcgaggatacctgaaccagtcggggatgg-gatgagattcgatttctcatccctgttaaatatgggtagggtagcta 4741651  T
Q  202 gtaaatatatgggagttgggtatgggga 229  Q
    |||| |||||| |||| |||||| ||||    
T  4741652 gtaagtatatgagagtagggtataggga 4741679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 89
Target Start/End: Original strand, 12075910 - 12075977
Alignment:
Q  22 catcatctctttgctggataatgcattacatcattgtgctcggcactaaaaaatacttttatttttat 89  Q
    ||||||||||||| |||||||||||||||| || || |||||    | ||||||||||||||||||||    
T  12075910 catcatctctttgttggataatgcattacaacaatgcgctcgaggttgaaaaatacttttatttttat 12075977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 217
Target Start/End: Complemental strand, 18423322 - 18423252
Alignment:
Q  146 ggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagt 217  Q
    ||||| || ||||||| || |||||||||||| | |||||| | ||||||||||| ||||||||||||||||    
T  18423322 ggggacgaggatgagaatcaatttctcatccccgttaggtatg-atagggtaacatgtaaatatatgggagt 18423252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 25940963 - 25940896
Alignment:
Q  22 catcatctctttgctggataatgcattacatcattgtgctcggcactaaaaaatacttttatttttat 89  Q
    |||||||| |||  |||||||||||||||| ||||| |||| |  |||||||||||||| ||||||||    
T  25940963 catcatctattttttggataatgcattacaacattgcgctcagggctaaaaaatactttgatttttat 25940896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 25 - 84
Target Start/End: Original strand, 35304798 - 35304857
Alignment:
Q  25 catctctttgctggataatgcattacatcattgtgctcggcactaaaaaatacttttatt 84  Q
    ||||||||| ||||||||||||||||| |||||  || ||  ||||||||||||||||||    
T  35304798 catctctttactggataatgcattacaacattgcacttggggctaaaaaatacttttatt 35304857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 109 - 176
Target Start/End: Complemental strand, 36306513 - 36306446
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatcc 176  Q
    |||||||| |||||||||||| |||||||||| ||| || ||  | |||||||||| |||||||||||    
T  36306513 cggggatgaggatggggcgggtatacccgaacccgtcggagaccaggatgagattcgatttctcatcc 36306446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 41323182 - 41323143
Alignment:
Q  274 taaacaccctttttcaagggaaaaacagttcggtttatat 313  Q
    ||||||||||||||||||||||||||| ||||| ||||||    
T  41323182 taaacaccctttttcaagggaaaaacaattcggattatat 41323143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 128 - 255
Target Start/End: Complemental strand, 43309239 - 43309112
Alignment:
Q  128 gggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttgggtatggg 227  Q
    ||||| ||||||| ||| ||||| | | ||||| ||| |||||||||||||| |  ||| || ||||||||| |||||| ||| | || | ||||||| |    
T  43309239 gggatccccgaacccgtcggggacggatatgaggttcaatttctcatccctgttgagtatgggtagggtaacgggtaaagatacgagattagggtatgag 43309140  T
Q  228 gacgagaaaggtaaaatccgtccccacc 255  Q
    || | | ||||||||| |||||||||||    
T  43309139 gatggggaaggtaaaacccgtccccacc 43309112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 257
Target Start/End: Original strand, 14606280 - 14606382
Alignment:
Q  155 gatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttgggtatggggacgagaaaggtaaaatccgtccccac 254  Q
    |||||||||| |||||||||||| | | ||||  | ||||||||||||||| |||| |||||| ||| ||| ||||| | |||| |||| || ||| |||    
T  14606280 gatgagattcaatttctcatccccgttgggtataggtagggtaacaggtaagtatacgggagtaggggatgaggacgtggaaggcaaaacccatccacac 14606379  T
Q  255 ccc 257  Q
    |||    
T  14606380 ccc 14606382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 64
Target Start/End: Complemental strand, 36918940 - 36918898
Alignment:
Q  22 catcatctctttgctggataatgcattacatcattgtgctcgg 64  Q
    |||||||| ||||||||||||||||||||| ||||| ||||||    
T  36918940 catcatctttttgctggataatgcattacaacattgcgctcgg 36918898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 107 - 257
Target Start/End: Complemental strand, 42774553 - 42774404
Alignment:
Q  107 tacggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaa 206  Q
    |||||||||| ||||| ||  ||||||||||||| ||| ||| | |  |||||||||  ||||||||||||   | |||| || |||| |||||  |||     
T  42774553 tacggggatgaggatgaggttgggatacccgaacccgtcggg-acggggatgagattgaatttctcatccccattgggtatgggtaggataacatataag 42774455  T
Q  207 tatatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    |||||| || |||| |||||||||| | ||||||||| ||||||| |||||    
T  42774454 tatatgagaattggatatggggacgtggaaggtaaaacccgtccctacccc 42774404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 257
Target Start/End: Original strand, 53906587 - 53906729
Alignment:
Q  116 ggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaata-tatggg 214  Q
    |||||||||||| |||||||| ||| | | ||||| |  | || ||||| |||||||||||| | | |||| || ||||||||| ||||| || | || |    
T  53906587 ggggatggggcgcggatacccaaacccatcggggacgggggtgggattcaatttctcatccccgttgggtatgggtagggtaacgggtaagtaatttgcg 53906686  T
Q  215 agttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    | | |||||||| || | ||||||||||| |||||||||||||    
T  53906687 aatcgggtatggagatgggaaaggtaaaacccgtccccacccc 53906729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 316
Target Start/End: Original strand, 7863323 - 7863356
Alignment:
Q  283 tttttcaagggaaaaacagttcggtttatataat 316  Q
    |||||||||||||||||||||||| |||||||||    
T  7863323 tttttcaagggaaaaacagttcggattatataat 7863356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 217
Target Start/End: Original strand, 10574748 - 10574861
Alignment:
Q  104 cactacggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggt 203  Q
    |||| |||||||||||||| || ||| |||||||||  | | ||||| | ||||| ||||| ||||||||| || | | |||| || | ||||||| |||    
T  10574748 cactgcggggatggggatgaggtgggaatacccgaatccattggggacggagatgtgattcaatttctcattcccgttgggtatgggtggggtaacgggt 10574847  T
Q  204 aaatatatgggagt 217  Q
    || |||||||||||    
T  10574848 aagtatatgggagt 10574861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 57
Target Start/End: Original strand, 12505802 - 12505835
Alignment:
Q  24 tcatctctttgctggataatgcattacatcattg 57  Q
    |||||||||||||||||||||||||||| |||||    
T  12505802 tcatctctttgctggataatgcattacaacattg 12505835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 316
Target Start/End: Original strand, 19835596 - 19835639
Alignment:
Q  272 cctaaacaccctttttcaagggaaaaacagttcggtttatataat 316  Q
    ||||||||||||||||||| || |||||||||||| |||||||||    
T  19835596 cctaaacaccctttttcaa-ggtaaaacagttcggattatataat 19835639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 316
Target Start/End: Complemental strand, 31582513 - 31582470
Alignment:
Q  272 cctaaacaccctttttcaagggaaaaacagttcggtttatataat 316  Q
    ||||||||||||||||||| || |||||||||||| |||||||||    
T  31582513 cctaaacaccctttttcaa-ggtaaaacagttcggattatataat 31582470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 316
Target Start/End: Original strand, 40703740 - 40703783
Alignment:
Q  272 cctaaacaccctttttcaagggaaaaacagttcggtttatataat 316  Q
    ||||||||||||||||||| || |||||||||||| |||||||||    
T  40703740 cctaaacaccctttttcaa-ggtaaaacagttcggattatataat 40703783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 316
Target Start/End: Complemental strand, 46440365 - 46440322
Alignment:
Q  272 cctaaacaccctttttcaagggaaaaacagttcggtttatataat 316  Q
    ||||||||||||||||||| || |||||||||||| |||||||||    
T  46440365 cctaaacaccctttttcaa-ggtaaaacagttcggattatataat 46440322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 253
Target Start/End: Original strand, 53910189 - 53910284
Alignment:
Q  155 gatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttgggtatggggacgagaaaggtaaaatccgtcccca 253  Q
    |||||||||| |||||||||||| |||  ||| || ||||||||| |||||  |||||||||  ||   |||| ||| ||||||||||| |||||||||    
T  53910189 gatgagattcgatttctcatccccgctgagtatgggtagggtaacgggtaagcatatgggagcagg---tgggaacgggaaaggtaaaacccgtcccca 53910284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 109 - 256
Target Start/End: Complemental strand, 4043 - 3896
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaata 208  Q
    |||||| ||||||||||||||| ||||||||| | | ||||| |  |||| ||||| |||||||||||| | | |||| || |||||||| | |||||||    
T  4043 cggggacggggatggggcgggggtacccgaacccatcggggacggggatgtgattcaatttctcatccccgttgggtatgggtagggtaataagtaaata 3944  T
Q  209 tatgggagttgggtatggggacgagaaaggtaaaatccgtccccaccc 256  Q
    |||| || | |||||||||||||   ||||||||||||||||||||||    
T  3943 tatgagaatcgggtatggggacggagaaggtaaaatccgtccccaccc 3896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1630 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold1630
Description:

Target: scaffold1630; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 135 - 257
Target Start/End: Complemental strand, 1382 - 1260
Alignment:
Q  135 ccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttgggtatggggacgaga 234  Q
    |||||| ||| ||||||| ||||||||||| |||||||||||| | |||||| |||||||||||||| ||| |||||| || |  |  ||||||||| |     
T  1382 ccgaacccgtcggggatggagatgagattcaatttctcatccccgttaggtatggatagggtaacagataagtatatgagaatcagacatggggacgggg 1283  T
Q  235 aaggtaaaatccgtccccacccc 257  Q
    ||||||||| |||||||||||||    
T  1282 aaggtaaaacccgtccccacccc 1260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 112 - 257
Target Start/End: Complemental strand, 10084 - 9939
Alignment:
Q  112 ggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatat 211  Q
    |||||||||||||  |||||||||||||| ||| ||||| |  |||||||||| |||||||||||| | |  ||| |||||||||||| | ||| |||||    
T  10084 ggatggggatgggatggggatacccgaacccgtcggggacggggatgagattcaatttctcatccccgttgagtatggatagggtaacggataagtatat 9985  T
Q  212 gggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    | || ||  |||||| |||| | |||||||||  ||||||||||||    
T  9984 gagaattatgtatggagacggggaaggtaaaacacgtccccacccc 9939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 116 - 257
Target Start/End: Original strand, 32834 - 32975
Alignment:
Q  116 ggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatggga 215  Q
    |||||||||| |||||||||||||| ||| ||||| |  |||||||||| |||||||||||    |||||| || ||||||||| ||||| |||||| ||    
T  32834 ggggatggggtggggatacccgaacccgtcggggacggggatgagattcaatttctcatcctcattaggtatgggtagggtaacgggtaagtatatgaga 32933  T
Q  216 gttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
     |  ||||||||||||   |||||||||  ||||||||||||    
T  32934 atcaggtatggggacggagaaggtaaaactcgtccccacccc 32975  T

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Target: scaffold0015 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 104 - 229
Target Start/End: Original strand, 56217 - 56342
Alignment:
Q  104 cactacggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggt 203  Q
    |||| |||||| |||||| ||||||| |||||||||| | | ||||||   |||||||||| |||||||||||||| | | || || ||||||||| |||    
T  56217 cactgcggggacggggattgggcgggaatacccgaacccattggggatagggatgagattcaatttctcatccctgttggatatgggtagggtaacgggt 56316  T
Q  204 aaatatatgggagttgggtatgggga 229  Q
    || ||||||||||| ||| |||||||    
T  56317 aagtatatgggagtaggggatgggga 56342  T

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Target: scaffold0036 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 109 - 257
Target Start/End: Complemental strand, 33180 - 33032
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaata 208  Q
    |||||||||||||| || |||||||||||||  ||| ||||| |  |||||||||| ||||||||| || | | |||| || ||||||||| ||||| ||    
T  33180 cggggatggggatgtggtggggatacccgaatccgtcggggacggggatgagattcaatttctcattcccgttgggtatgggtagggtaacgggtaagta 33081  T
Q  209 tatgggagttgggtatggggacgagaaaggtaaaatccgtccccacccc 257  Q
    |||| || |  |||||||||||| | || |||||| | |||||||||||    
T  33080 tatgagaatcaggtatggggacggggaatgtaaaacctgtccccacccc 33032  T

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Target: scaffold0198 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 148 - 257
Target Start/End: Original strand, 3678 - 3787
Alignment:
Q  148 ggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttgggtatggggacgagaaaggtaaaatccg 247  Q
    ||||| |||| |||||| |||||||||||  | | |||| |||||||||||| |||||| || || ||||  |||||||||||| | ||||||||| |||    
T  3678 ggatggagataagattcaatttctcatcctcgttgggtatggatagggtaacgggtaaaaatgtgagagtatggtatggggacggggaaggtaaaacccg 3777  T
Q  248 tccccacccc 257  Q
    ||||||||||    
T  3778 tccccacccc 3787  T

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Target: scaffold0244 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 89
Target Start/End: Original strand, 4858 - 4925
Alignment:
Q  22 catcatctctttgctggataatgcattacatcattgtgctcggcactaaaaaatacttttatttttat 89  Q
    |||||||||||||||||||||||||||||| ||||  |||||  | | ||||||||||||||||||||    
T  4858 catcatctctttgctggataatgcattacaacatttcgctcgaaattgaaaaatacttttatttttat 4925  T

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Target: scaffold0244; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 227
Target Start/End: Original strand, 4939 - 5064
Alignment:
Q  101 atccactacggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaaca 200  Q
    ||||||| |||||||||| ||||| ||||||||||||||  ||| |||||   ||||||  ||| || ||||||||| | |||||| |  |||||||||     
T  4939 atccactgcggggatggg-atgggacggggatacccgaatccgtcggggactgagatgaatttcgatctctcatccccgttaggtatgagtagggtaacg 5037  T
Q  201 ggtaaatatatgggagttgggtatggg 227  Q
     |||| |||||| |||| |||||||||    
T  5038 agtaagtatatgagagtagggtatggg 5064  T

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Target: scaffold0022 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 212
Target Start/End: Complemental strand, 90374 - 90279
Alignment:
Q  117 gggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatg 212  Q
    ||||||||||| |||||||| ||| ||| ||||| |  |||||| ||| |||||||||||||| | |||| |||||||||||| ||||| ||||||    
T  90374 gggatggggcgaggatacccaaacccgtcggggacggggatgaggttcaatttctcatccctgttgggtatggatagggtaacgggtaagtatatg 90279  T

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Target: scaffold0008 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 104 - 254
Target Start/End: Complemental strand, 67516 - 67366
Alignment:
Q  104 cactacggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggt 203  Q
    |||| |||||| ||||||| ||||||  ||||||||| | | ||| |||  |||||||||| ||||||||||||   |   || || |||||||||||||    
T  67516 cactgcggggacggggatgaggcgggtttacccgaacccattgggaatggggatgagattcaatttctcatccccattgaatatgggtagggtaacaggt 67417  T
Q  204 aaatatatgggagttgggtatggggacgagaaaggtaaaatccgtccccac 254  Q
    |||||||||| ||| ||| ||||||||| | |||| |||| || |||||||    
T  67416 aaatatatggcagtaggggatggggacggggaaggcaaaagccatccccac 67366  T

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Target: scaffold0008; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 104 - 254
Target Start/End: Complemental strand, 75359 - 75209
Alignment:
Q  104 cactacggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggt 203  Q
    |||| |||||| ||||||| ||||||  ||||||||| | | ||| |||  |||||||||| ||||||||||||   |   || || |||||||||||||    
T  75359 cactgcggggacggggatgaggcgggtttacccgaacccattgggaatggggatgagattcaatttctcatccccattgaatatgggtagggtaacaggt 75260  T
Q  204 aaatatatgggagttgggtatggggacgagaaaggtaaaatccgtccccac 254  Q
    |||||||||| ||| ||| ||||||||| | |||| |||| || |||||||    
T  75259 aaatatatggcagtaggggatggggacggggaaggcaaaagccatccccac 75209  T

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Target: scaffold0294 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 251
Target Start/End: Complemental strand, 14562 - 14420
Alignment:
Q  109 cggggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaata 208  Q
    |||||| ||||||||||  ||||||| | ||| | | | ||||| ||||| | ||| |||||||||||| | |   || || |||||||||| |||| ||    
T  14562 cggggacggggatggggtagggatactcaaacccatcgaggatggagatggggttcaatttctcatccccgttgaatatgggtagggtaacaagtaagta 14463  T
Q  209 tatgggagttgggtatggggacgagaaaggtaaaatccgtccc 251  Q
    |||| || ||| ||||||||||||| || ||||||||||||||    
T  14462 tatgagaattgagtatggggacgaggaatgtaaaatccgtccc 14420  T

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Target: scaffold0097 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 177
Target Start/End: Complemental strand, 33366 - 33300
Alignment:
Q  111 gggatggggatggggcggggatacccgaactcgtaggggatgaagatgagattctatttctcatccc 177  Q
    |||| |||||||| |||||||||||||||| ||| ||||| | ||||||| ||| ||||||||||||    
T  33366 gggacggggatggagcggggatacccgaacccgtcggggacggagatgaggttcaatttctcatccc 33300  T

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Target: scaffold0005 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 257
Target Start/End: Complemental strand, 211098 - 210996
Alignment:
Q  155 gatgagattctatttctcatccctgctaggtacggatagggtaacaggtaaatatatgggagttgggtatggggacgagaaaggtaaaatccgtccccac 254  Q
    |||||||||| |||||||||||| | | ||||  | ||||||||||||||| |||| |||||| ||| ||| ||||| | |||| |||| || ||| |||    
T  211098 gatgagattcaatttctcatccccgttgggtataggtagggtaacaggtaagtatacgggagtaggggatgaggacgtggaaggcaaaacccatccacac 210999  T
Q  255 ccc 257  Q
    |||    
T  210998 ccc 210996  T

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Target: scaffold0157 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 57
Target Start/End: Complemental strand, 14675 - 14642
Alignment:
Q  24 tcatctctttgctggataatgcattacatcattg 57  Q
    |||||||||||||||||||||||||||| |||||    
T  14675 tcatctctttgctggataatgcattacaacattg 14642  T

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Target: scaffold0007 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 151
Target Start/End: Original strand, 199092 - 199133
Alignment:
Q  110 ggggatggggatggggcggggatacccgaactcgtaggggat 151  Q
    |||||||||||| |||||||||||||||||| ||||| ||||    
T  199092 ggggatggggatagggcggggatacccgaacccgtagaggat 199133  T

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