View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0343_high_10 (Length: 278)

Name: NF0343_high_10
Description: NF0343
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0343_high_10
NF0343_high_10
[»] chr7 (28 HSPs)
chr7 (3-201)||(15168032-15168230)
chr7 (2-201)||(18873217-18873416)
chr7 (7-201)||(10895795-10895989)
chr7 (2-201)||(14422841-14423040)
chr7 (2-198)||(12709843-12710038)
chr7 (2-198)||(13122914-13123109)
chr7 (2-201)||(13743566-13743764)
chr7 (3-181)||(16009454-16009631)
chr7 (2-194)||(12590643-12590832)
chr7 (2-116)||(13007374-13007487)
chr7 (5-171)||(16677180-16677348)
chr7 (5-171)||(17651416-17651584)
chr7 (3-58)||(11382871-11382926)
chr7 (3-58)||(11389348-11389403)
chr7 (1-58)||(20311050-20311107)
chr7 (1-58)||(21230958-21231015)
chr7 (3-66)||(13679485-13679548)
chr7 (1-57)||(2971254-2971310)
chr7 (1-57)||(20906460-20906516)
chr7 (3-57)||(11311059-11311113)
chr7 (1-57)||(29181108-29181164)
chr7 (3-59)||(46625961-46626017)
chr7 (1-55)||(31155396-31155450)
chr7 (1-54)||(16091078-16091131)
chr7 (2-38)||(831633-831669)
chr7 (2-38)||(1196813-1196849)
chr7 (1-57)||(14319628-14319684)
chr7 (2-38)||(34958578-34958614)
[»] chr3 (26 HSPs)
chr3 (3-201)||(14762758-14762956)
chr3 (5-201)||(20247791-20247987)
chr3 (5-201)||(38310802-38310998)
chr3 (5-196)||(24192817-24193009)
chr3 (3-181)||(9534205-9534382)
chr3 (1-181)||(23370504-23370684)
chr3 (1-116)||(24933827-24933941)
chr3 (2-84)||(41455097-41455178)
chr3 (2-142)||(16801467-16801606)
chr3 (5-181)||(55499104-55499281)
chr3 (3-64)||(18929239-18929300)
chr3 (3-67)||(17240513-17240577)
chr3 (1-57)||(13302239-13302295)
chr3 (1-57)||(13323786-13323842)
chr3 (1-57)||(12033443-12033499)
chr3 (1-57)||(13312895-13312951)
chr3 (1-57)||(17131732-17131788)
chr3 (1-57)||(51301589-51301645)
chr3 (1-116)||(10389442-10389557)
chr3 (1-116)||(10414531-10414646)
chr3 (1-116)||(10421201-10421316)
chr3 (1-57)||(14865846-14865902)
chr3 (1-37)||(23392818-23392854)
chr3 (5-59)||(16801027-16801081)
chr3 (1-38)||(2247648-2247685)
chr3 (1-37)||(52212430-52212466)
[»] scaffold0029 (3 HSPs)
scaffold0029 (2-201)||(111738-111938)
scaffold0029 (1-57)||(91201-91257)
scaffold0029 (1-57)||(96927-96983)
[»] scaffold0026 (2 HSPs)
scaffold0026 (2-201)||(11850-12049)
scaffold0026 (1-181)||(111563-111742)
[»] chr5 (16 HSPs)
chr5 (2-201)||(22750998-22751197)
chr5 (2-181)||(38144536-38144714)
chr5 (3-181)||(28370055-28370232)
chr5 (3-181)||(19512263-19512441)
chr5 (2-116)||(23528573-23528686)
chr5 (3-67)||(18407944-18408008)
chr5 (1-58)||(22438746-22438803)
chr5 (3-67)||(23111200-23111264)
chr5 (1-57)||(19236900-19236956)
chr5 (1-55)||(22461158-22461212)
chr5 (1-55)||(22467782-22467836)
chr5 (1-57)||(20781744-20781800)
chr5 (1-31)||(17021912-17021942)
chr5 (1-57)||(20772969-20773025)
chr5 (1-37)||(21663141-21663177)
chr5 (1-37)||(22356902-22356938)
[»] chr6 (31 HSPs)
chr6 (3-201)||(23057795-23057993)
chr6 (2-201)||(29614146-29614345)
chr6 (3-181)||(23839075-23839253)
chr6 (2-199)||(18800296-18800493)
chr6 (1-181)||(10986179-10986359)
chr6 (3-201)||(4477714-4477912)
chr6 (2-135)||(930095-930227)
chr6 (2-116)||(12168305-12168418)
chr6 (2-116)||(19287214-19287327)
chr6 (2-116)||(19785869-19785982)
chr6 (2-116)||(19878398-19878511)
chr6 (2-116)||(19884174-19884287)
chr6 (1-85)||(34639985-34640069)
chr6 (1-85)||(34646659-34646743)
chr6 (5-201)||(21565214-21565410)
chr6 (1-116)||(25469703-25469816)
chr6 (1-58)||(24512842-24512899)
chr6 (3-55)||(9187498-9187550)
chr6 (3-59)||(25348486-25348542)
chr6 (5-59)||(25598643-25598697)
chr6 (3-59)||(25397172-25397228)
chr6 (1-67)||(31252413-31252479)
chr6 (3-59)||(19471335-19471391)
chr6 (1-91)||(11288667-11288758)
chr6 (5-59)||(2286769-2286823)
chr6 (1-55)||(15458492-15458546)
chr6 (1-55)||(15465087-15465141)
chr6 (3-37)||(18659450-18659484)
chr6 (3-37)||(24441673-24441707)
chr6 (1-30)||(28288508-28288537)
chr6 (1-37)||(29847278-29847314)
[»] scaffold1773 (1 HSPs)
scaffold1773 (2-201)||(1036-1233)
[»] scaffold0006 (1 HSPs)
scaffold0006 (2-201)||(50037-50234)
[»] chr4 (16 HSPs)
chr4 (2-201)||(8045832-8046030)
chr4 (2-201)||(11847964-11848169)
chr4 (1-116)||(53483646-53483761)
chr4 (1-58)||(15408139-15408196)
chr4 (3-59)||(8834895-8834951)
chr4 (3-59)||(13888641-13888697)
chr4 (5-57)||(14486661-14486713)
chr4 (3-59)||(15245215-15245271)
chr4 (8-59)||(22724691-22724742)
chr4 (3-59)||(15308120-15308176)
chr4 (1-57)||(16146829-16146885)
chr4 (1-57)||(27906266-27906322)
chr4 (1-59)||(14912081-14912139)
chr4 (3-33)||(15069781-15069811)
chr4 (3-33)||(15076381-15076411)
chr4 (2-38)||(15747556-15747592)
[»] scaffold0025 (1 HSPs)
scaffold0025 (5-201)||(14398-14595)
[»] scaffold0924 (1 HSPs)
scaffold0924 (2-201)||(750-949)
[»] chr8 (14 HSPs)
chr8 (1-181)||(44477500-44477679)
chr8 (1-181)||(44492658-44492837)
chr8 (2-182)||(23866490-23866670)
chr8 (5-181)||(8727735-8727911)
chr8 (4-116)||(17054533-17054644)
chr8 (3-67)||(23482053-23482117)
chr8 (3-59)||(18614271-18614327)
chr8 (94-181)||(27940946-27941032)
chr8 (3-59)||(39364919-39364975)
chr8 (3-57)||(29643386-29643440)
chr8 (1-58)||(14056562-14056619)
chr8 (1-58)||(25111976-25112033)
chr8 (1-57)||(24320669-24320725)
chr8 (3-59)||(21931696-21931752)
[»] chr2 (18 HSPs)
chr2 (3-181)||(6483595-6483772)
chr2 (3-181)||(6487062-6487239)
chr2 (3-201)||(19661454-19661651)
chr2 (2-171)||(26583715-26583882)
chr2 (5-181)||(23878885-23879060)
chr2 (5-201)||(23089057-23089253)
chr2 (3-181)||(23101463-23101641)
chr2 (1-116)||(5706022-5706137)
chr2 (3-67)||(23265133-23265197)
chr2 (3-67)||(23280201-23280265)
chr2 (3-64)||(21908353-21908414)
chr2 (1-57)||(10577-10633)
chr2 (3-59)||(24661576-24661632)
chr2 (1-57)||(25180928-25180984)
chr2 (1-106)||(26885133-26885238)
chr2 (1-55)||(23168297-23168351)
chr2 (1-55)||(23579554-23579608)
chr2 (1-57)||(27207718-27207774)
[»] scaffold0247 (1 HSPs)
scaffold0247 (2-180)||(11219-11397)
[»] chr1 (16 HSPs)
chr1 (3-181)||(20437024-20437202)
chr1 (2-116)||(41111977-41112090)
chr1 (3-67)||(32651563-32651627)
chr1 (3-67)||(18712790-18712854)
chr1 (3-58)||(19663517-19663572)
chr1 (3-59)||(20805320-20805376)
chr1 (3-58)||(11158093-11158148)
chr1 (5-59)||(10811785-10811839)
chr1 (1-57)||(20851131-20851187)
chr1 (1-57)||(20857758-20857814)
chr1 (1-57)||(21706276-21706332)
chr1 (1-57)||(21710818-21710874)
chr1 (3-33)||(24476350-24476380)
chr1 (3-33)||(25091418-25091448)
chr1 (4-37)||(18271338-18271371)
chr1 (4-37)||(18275992-18276025)
[»] scaffold0117 (2 HSPs)
scaffold0117 (2-201)||(1897-2095)
scaffold0117 (2-201)||(8574-8772)
[»] scaffold0058 (1 HSPs)
scaffold0058 (2-201)||(149-346)
[»] scaffold0553 (1 HSPs)
scaffold0553 (1-181)||(10194-10374)
[»] scaffold0544 (1 HSPs)
scaffold0544 (1-181)||(1524-1704)
[»] scaffold0090 (1 HSPs)
scaffold0090 (2-200)||(18026-18225)
[»] scaffold0154 (1 HSPs)
scaffold0154 (2-142)||(30772-30913)
[»] scaffold0796 (2 HSPs)
scaffold0796 (2-116)||(1732-1845)
scaffold0796 (2-116)||(5755-5868)
[»] scaffold0476 (1 HSPs)
scaffold0476 (5-199)||(3295-3490)
[»] scaffold0456 (4 HSPs)
scaffold0456 (2-85)||(904-987)
scaffold0456 (2-85)||(8049-8132)
scaffold0456 (148-201)||(846-899)
scaffold0456 (148-201)||(7991-8044)
[»] scaffold0077 (1 HSPs)
scaffold0077 (5-181)||(3624-3800)
[»] scaffold0129 (1 HSPs)
scaffold0129 (1-114)||(45273-45386)
[»] scaffold0222 (1 HSPs)
scaffold0222 (3-67)||(16811-16875)
[»] scaffold0004 (2 HSPs)
scaffold0004 (3-67)||(116887-116951)
scaffold0004 (4-37)||(60441-60474)
[»] scaffold0310 (1 HSPs)
scaffold0310 (1-58)||(17643-17700)
[»] scaffold0107 (1 HSPs)
scaffold0107 (1-58)||(40530-40587)
[»] scaffold0019 (1 HSPs)
scaffold0019 (1-58)||(135473-135530)
[»] scaffold0461 (1 HSPs)
scaffold0461 (3-67)||(8-72)
[»] scaffold0146 (1 HSPs)
scaffold0146 (3-67)||(13623-13687)
[»] scaffold0020 (1 HSPs)
scaffold0020 (3-67)||(101928-101992)
[»] scaffold0235 (1 HSPs)
scaffold0235 (4-56)||(22594-22646)
[»] scaffold0124 (2 HSPs)
scaffold0124 (3-58)||(34276-34331)
scaffold0124 (1-59)||(35437-35495)
[»] scaffold0138 (1 HSPs)
scaffold0138 (3-59)||(12296-12352)
[»] scaffold0317 (1 HSPs)
scaffold0317 (3-66)||(1378-1441)
[»] scaffold0139 (1 HSPs)
scaffold0139 (3-58)||(14997-15052)
[»] scaffold0348 (1 HSPs)
scaffold0348 (1-57)||(9336-9392)
[»] scaffold0127 (1 HSPs)
scaffold0127 (1-57)||(10239-10295)
[»] scaffold0023 (2 HSPs)
scaffold0023 (1-57)||(135438-135494)
scaffold0023 (1-37)||(163352-163388)
[»] scaffold0001 (1 HSPs)
scaffold0001 (1-57)||(493027-493082)
[»] scaffold0815 (1 HSPs)
scaffold0815 (3-54)||(1453-1504)
[»] scaffold0634 (1 HSPs)
scaffold0634 (162-201)||(3519-3558)
[»] scaffold0096 (1 HSPs)
scaffold0096 (4-59)||(39508-39563)
[»] scaffold1318 (1 HSPs)
scaffold1318 (3-57)||(1913-1967)
[»] scaffold0609 (1 HSPs)
scaffold0609 (1-67)||(5856-5922)
[»] scaffold0335 (1 HSPs)
scaffold0335 (3-59)||(2628-2684)
[»] scaffold0261 (1 HSPs)
scaffold0261 (1-57)||(23568-23624)
[»] scaffold0053 (1 HSPs)
scaffold0053 (1-57)||(79489-79545)
[»] scaffold2054 (1 HSPs)
scaffold2054 (2-91)||(680-770)
[»] scaffold0249 (1 HSPs)
scaffold0249 (1-55)||(13893-13947)
[»] scaffold0481 (1 HSPs)
scaffold0481 (4-49)||(676-721)
[»] scaffold0962 (1 HSPs)
scaffold0962 (1-37)||(614-650)
[»] scaffold0600 (1 HSPs)
scaffold0600 (3-59)||(732-788)
[»] scaffold0453 (1 HSPs)
scaffold0453 (1-57)||(10549-10605)
[»] scaffold0422 (1 HSPs)
scaffold0422 (1-53)||(3962-4014)
[»] scaffold0181 (1 HSPs)
scaffold0181 (1-37)||(25519-25555)
[»] scaffold0180 (1 HSPs)
scaffold0180 (3-52)||(11630-11681)
[»] scaffold0131 (1 HSPs)
scaffold0131 (1-57)||(997-1053)
[»] scaffold0072 (1 HSPs)
scaffold0072 (1-57)||(49969-50025)
[»] scaffold0034 (1 HSPs)
scaffold0034 (5-57)||(73285-73337)
[»] scaffold0031 (2 HSPs)
scaffold0031 (3-59)||(121902-121958)
scaffold0031 (3-59)||(132778-132834)
[»] scaffold0028 (1 HSPs)
scaffold0028 (3-55)||(69749-69801)


Alignment Details
Target: chr7 (Bit Score: 171; Significance: 7e-92; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 3 - 201
Target Start/End: Complemental strand, 15168230 - 15168032
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggttt 102  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  15168230 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 15168131  T
Q  103 aatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 201  Q
     ||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15168130 gatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 15168032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 2 - 201
Target Start/End: Complemental strand, 18873416 - 18873217
Alignment:
Q  2 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtt 101  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  18873416 ctaaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 18873317  T
Q  102 taatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 201  Q
    | ||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18873316 tgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 18873217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 7 - 201
Target Start/End: Original strand, 10895795 - 10895989
Alignment:
Q  7 gtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagtttt-ggaaaataaattgagggttagggtttaat 105  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||| |||||||| |||||||||||| ||    
T  10895795 gtaagggtgagactatctctcaataatcataatctataatttttgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtttgat 10895894  T
Q  106 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 201  Q
    ||||||||||| |||||| ||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10895895 gatgattctgaggggaat-gggtattgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 10895989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 2 - 201
Target Start/End: Complemental strand, 14423040 - 14422841
Alignment:
Q  2 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttagggt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||    
T  14423040 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggt 14422941  T
Q  101 ttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcat 200  Q
    || ||||||||||||| ||||| |||||| ||||| |||||||||  ||||||| ||||||| |||||||||||||||||| | ||| || |||||||||    
T  14422940 ttgatgatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatattgttgttgtgatcat 14422842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 2 - 198
Target Start/End: Original strand, 12709843 - 12710038
Alignment:
Q  2 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtt 101  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  12709843 ctaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttagggtt 12709941  T
Q  102 taatgatgattctgaagggaattgggtaatgatcgtgttaattc-ccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatc 198  Q
    | ||||||||| ||||| ||| |||||||||||| |||||||||   |||||||||||||||||||||  |||||||||| |||||| ||||||||||    
T  12709942 tgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatc-ttgttgttgctgtgatc 12710038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 2 - 198
Target Start/End: Original strand, 13122914 - 13123109
Alignment:
Q  2 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtt 101  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  13122914 ctaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttagggtt 13123012  T
Q  102 taatgatgattctgaagggaattgggtaatgatcgtgttaattc-ccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatc 198  Q
    | ||||||||| ||||| ||| |||||||||||| |||||||||   |||||||||||||||||||||  |||||||||| |||||| ||||||||||    
T  13123013 tgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatc-ttgttgttgctgtgatc 13123109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 2 - 201
Target Start/End: Complemental strand, 13743764 - 13743566
Alignment:
Q  2 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtt 101  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  13743764 ctaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttagggtt 13743666  T
Q  102 taatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 201  Q
    | ||||||||| ||||| ||| |||||||||||| ||||||||  |||||| |||  |||||||| |||| ||||||||| ||||  |||||||||||||    
T  13743665 tgatgatgattatgaagagaaatgggtaatgatcatgttaattttcttgtattatgctgttcagattgaagacttaatctatgttattgctgtgatcata 13743566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 3 - 181
Target Start/End: Complemental strand, 16009631 - 16009454
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggttt 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||| |||||| |||||    
T  16009631 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatggttttggaagataaattgtgggttaaggttt 16009532  T
Q  103 aatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 181  Q
     ||||||||||||| ||||| |||||| ||||| |||||||||  ||||||| ||||||| ||||||||||||||||||    
T  16009531 gatgatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatct 16009454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 2 - 194
Target Start/End: Original strand, 12590643 - 12590832
Alignment:
Q  2 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtt 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||  |||||||||    
T  12590643 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataatatgaaagttagggtt 12590741  T
Q  102 taatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgt 194  Q
    | ||||||||||||| ||  | || |||| |||  ||||| ||  |||| ||| ||||||| ||||||||| |||||||  ||||| ||||||    
T  12590742 tgatgatgattctgatgg--aatgagtaaagatgatgttagttttcttggaatttaatgttaagaatgaaagcttaatccatgttgttgctgt 12590832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 2 - 116
Target Start/End: Complemental strand, 13007487 - 13007374
Alignment:
Q  2 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtt 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||  |||||||||    
T  13007487 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttagggtt 13007389  T
Q  102 taatgatgattctga 116  Q
    | |||||||||||||    
T  13007388 tgatgatgattctga 13007374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 5 - 171
Target Start/End: Complemental strand, 16677348 - 16677180
Alignment:
Q  5 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaat-aaattgagggttagggttt 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||| || ||||| |||||||||||||    
T  16677348 aggtaagggtgagactatctctcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaaattaagggttagggttt 16677249  T
Q  103 aatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaa 171  Q
     ||||||||| ||| | | || | ||||||||| |||||| |   ||||||  | ||||||||||||||    
T  16677248 gatgatgattttgaggaggatggtgtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaa 16677180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 5 - 171
Target Start/End: Complemental strand, 17651584 - 17651416
Alignment:
Q  5 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaat-aaattgagggttagggttt 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||| || ||||| |||||||||||||    
T  17651584 aggtaagggtgagactatctctcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaaattaagggttagggttt 17651485  T
Q  103 aatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaa 171  Q
     ||||||||| ||| | | || | ||||||||| |||||| |   ||||||  | ||||||||||||||    
T  17651484 gatgatgattttgaggaggatggtgtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaa 17651416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 11382871 - 11382926
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 58  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11382871 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattg 11382926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 11389348 - 11389403
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 58  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11389348 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattg 11389403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 20311050 - 20311107
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 58  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  20311050 tctaaggtaagggtgagactatctctcaataatcataacgtataatttctgaaaattg 20311107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 21230958 - 21231015
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 58  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  21230958 tctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 21231015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 13679548 - 13679485
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaatt 66  Q
    |||||||||||||||||||||| ||||| ||||| || |||||||| |||||||||| ||||||    
T  13679548 taaggtaagggtgagactatctttcaatgatcatgatatataatttttgaaaattgatctaatt 13679485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 2971310 - 2971254
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 57  Q
    ||||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  2971310 tctaaggtaagggtgggattatctttcaatagtcataatttataatttctgaaaatt 2971254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 20906460 - 20906516
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 57  Q
    ||||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  20906460 tctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20906516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 11311113 - 11311059
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 57  Q
    ||||||||||||||||||||||||||||||| ||| | || ||||||| ||||||    
T  11311113 taaggtaagggtgagactatctctcaataataatagtgtagaatttctaaaaatt 11311059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 29181108 - 29181164
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 57  Q
    ||||||||||||||| || ||||| |||||| ||||||| | |||||||||||||||    
T  29181108 tctaaggtaagggtgggattatctttcaatagtcataatatgtaatttctgaaaatt 29181164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 46626017 - 46625961
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 59  Q
    |||| |||||||||||||| |||||||| || ||||| ||||||||| |||||||||    
T  46626017 taagataagggtgagactaactctcaatgattataatatataatttcggaaaattga 46625961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 31155450 - 31155396
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 55  Q
    ||||||||||||||| || ||||| ||||| || ||||| |||||||||||||||    
T  31155450 tctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaa 31155396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 16091131 - 16091078
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 54  Q
    ||||||||||||||| || ||||| |||||| ||||||| | ||||||||||||    
T  16091131 tctaaggtaagggtgggattatctttcaatagtcataatatgtaatttctgaaa 16091078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 831633 - 831669
Alignment:
Q  2 ctaaggtaagggtgagactatctctcaataatcataa 38  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  831633 ctaaggtaagggtgagactaactctcaataattataa 831669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 1196813 - 1196849
Alignment:
Q  2 ctaaggtaagggtgagactatctctcaataatcataa 38  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  1196813 ctaaggtaagggtgagactaactctcaataattataa 1196849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 14319628 - 14319684
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 57  Q
    ||||||||||||||| || ||||| ||||| ||  |||| |||||||||||||||||    
T  14319628 tctaaggtaagggtgggattatctttcaatgattttaatgtataatttctgaaaatt 14319684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 34958614 - 34958578
Alignment:
Q  2 ctaaggtaagggtgagactatctctcaataatcataa 38  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  34958614 ctaaggtaagggtgagactaactctcaataattataa 34958578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 171; Significance: 7e-92; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 3 - 201
Target Start/End: Original strand, 14762758 - 14762956
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggttt 102  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  14762758 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 14762857  T
Q  103 aatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 201  Q
     ||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14762858 gatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 14762956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 5 - 201
Target Start/End: Original strand, 20247791 - 20247987
Alignment:
Q  5 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaa 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |    
T  20247791 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttga 20247890  T
Q  105 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 201  Q
    |||||||||||||||||| |||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20247891 tgatgattctgaagggaaatgggtaatgatcatgttaattttcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 20247987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 5 - 201
Target Start/End: Original strand, 38310802 - 38310998
Alignment:
Q  5 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaa 104  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||| |    
T  38310802 aggtaagggtgagactatctctcgataatcataatctataatttctgaatattgacctaattgcatagttttggaagataaattgagggttagggtttga 38310901  T
Q  105 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 201  Q
    |||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38310902 tgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 38310998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 5 - 196
Target Start/End: Complemental strand, 24193009 - 24192817
Alignment:
Q  5 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagtttt-ggaaaataaattgagggttagggttta 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||     
T  24193009 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttg 24192910  T
Q  104 atgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 196  Q
    ||||||||||||||||||| |||||||||||| |||||||||  ||||||| | |||||||||||||||||||||||| || || ||||||||    
T  24192909 atgatgattctgaagggaaatgggtaatgatcatgttaattctgttgtaatgtgatgttcagaatgaaaacttaatctatgctgttgctgtga 24192817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 3 - 181
Target Start/End: Complemental strand, 9534382 - 9534205
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggttt 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  9534382 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 9534283  T
Q  103 aatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 181  Q
     |||||||||||||  |||| |||||| ||||| |||||||||  ||||||| ||||||| ||||||||||||||||||    
T  9534282 gatgatgattctgagtggaa-tgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatct 9534205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 23370504 - 23370684
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttaggg 99  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||| |||||||||    
T  23370504 tctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttaggg 23370603  T
Q  100 tttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 181  Q
    ||| ||||||||||||| ||||| |||||| ||||| |||||||||  ||||||| ||||||| ||||||||||||||||||    
T  23370604 tttgatgatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatct 23370684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 24933827 - 24933941
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||   |||||||    
T  24933827 tctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataatatgaaaattagggt 24933925  T
Q  101 ttaatgatgattctga 116  Q
    || |||||||||||||    
T  24933926 ttgatgatgattctga 24933941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 41455097 - 41455178
Alignment:
Q  2 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaata 84  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||    
T  41455097 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaata 41455178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 142
Target Start/End: Original strand, 16801467 - 16801606
Alignment:
Q  2 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaat-aaattgagggttagggt 100  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||||| ||| ||| || ||||||| ||||||||     
T  16801467 ctaaggtaagggtgagactatctctcaataatcat-atatataatttctgaaaattgacctgattgcttagcttttgaagataaaattgaaggttaggg- 16801564  T
Q  101 ttaatgatgattctgaagggaattgggtaatgatcgtgttaa 142  Q
    || ||||||||| ||| | |||| | ||||||||| ||||||    
T  16801565 ttgatgatgattttgaggagaatggtgtaatgatcatgttaa 16801606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 5 - 181
Target Start/End: Original strand, 55499104 - 55499281
Alignment:
Q  5 aggtaagggtgagactatctctcaataatc-ataatctataatttctg-aaaattgacctaattgcttagttttggaaaataaattgagggttagggttt 102  Q
    |||||||||||||||||||||||| ||||  ||||| | ||||||| | ||||||||||||| ||||||   |||   |  |||||||||||||||||||    
T  55499104 aggtaagggtgagactatctctcattaatagataatatgtaatttcgggaaaattgacctaactgcttaaccttgaggataaaattgagggttagggttt 55499203  T
Q  103 aatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 181  Q
     ||||||||||||| ||||| |||||||||||| ||||||||   ||||||| | |||||| |||||||| ||||||||    
T  55499204 gatgatgattctgaggggaa-tgggtaatgatcatgttaattatgttgtaatgtgatgttcggaatgaaatcttaatct 55499281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 18929300 - 18929239
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaa 64  Q
    |||||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||    
T  18929300 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatctaa 18929239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 17240513 - 17240577
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 67  Q
    |||||||||||||||||||||||||||||||| ||||  |||||||||||||||||| |||||||    
T  17240513 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 17240577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 13302239 - 13302295
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 57  Q
    |||||||||||||||||| ||||| |||||||||||||| | |||||||||||||||    
T  13302239 tctaaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 13302295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 13323786 - 13323842
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 57  Q
    |||||||||||||||||| ||||| |||||||||||||| | |||||||||||||||    
T  13323786 tctaaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 13323842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 12033443 - 12033499
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 57  Q
    ||||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  12033443 tctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 12033499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 13312895 - 13312951
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 57  Q
    |||||||||||||||||| ||||| |||||||||||||| | |||||| ||||||||    
T  13312895 tctaaggtaagggtgagattatctttcaataatcataatatgtaatttttgaaaatt 13312951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 17131788 - 17131732
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 57  Q
    ||||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  17131788 tctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 17131732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 51301645 - 51301589
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 57  Q
    |||||||||||||||||| |||||  ||||||||||||| | |||||||||||||||    
T  51301645 tctaaggtaagggtgagattatcttccaataatcataatatgtaatttctgaaaatt 51301589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 10389442 - 10389557
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggt 100  Q
    ||||||||||||||| || ||||| ||||| || ||||| ||||||||||||||| | | |||||||  |||||||  | |||||  |||   |||||||    
T  10389442 tctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggt 10389541  T
Q  101 ttaatgatgattctga 116  Q
    || |||||||||||||    
T  10389542 ttgatgatgattctga 10389557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 10414531 - 10414646
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggt 100  Q
    ||||||||||||||| || ||||| ||||| || ||||| ||||||||||||||| | | |||||||  |||||||  | |||||  |||   |||||||    
T  10414531 tctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggt 10414630  T
Q  101 ttaatgatgattctga 116  Q
    || |||||||||||||    
T  10414631 ttgatgatgattctga 10414646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 10421201 - 10421316
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggt 100  Q
    ||||||||||||||| || ||||| ||||| || ||||| ||||||||||||||| | | |||||||  |||||||  | |||||  |||   |||||||    
T  10421201 tctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggt 10421300  T
Q  101 ttaatgatgattctga 116  Q
    || |||||||||||||    
T  10421301 ttgatgatgattctga 10421316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 14865902 - 14865846
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 57  Q
    ||||||||||||||| || ||||| |||||| ||||||| | |||||||||||||||    
T  14865902 tctaaggtaagggtgggattatctttcaatagtcataatatgtaatttctgaaaatt 14865846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 23392818 - 23392854
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcata 37  Q
    ||||||||||||||||||||| |||||||||||||||    
T  23392818 tctaaggtaagggtgagactaactctcaataatcata 23392854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 16801081 - 16801027
Alignment:
Q  5 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 59  Q
    ||||||||||||||||| |||||||| ||  |||| ||||| |||||||||||||    
T  16801081 aggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattga 16801027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 2247648 - 2247685
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataa 38  Q
    ||||||||||||||||||||| ||||||||||| ||||    
T  2247648 tctaaggtaagggtgagactaactctcaataattataa 2247685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 52212430 - 52212466
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcata 37  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  52212430 tctaaggtaagggtgaggctaactctcaataatcata 52212466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 169; Significance: 1e-90; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 2 - 201
Target Start/End: Complemental strand, 111938 - 111738
Alignment:
Q  2 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa-ttgacctaattgcttagttttggaaaataaattgagggttagggt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||||    
T  111938 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaaattgacctaattgcatagttttggaagataaattgagggttagggt 111839  T
Q  101 ttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcat 200  Q
    || ||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  111838 ttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcat 111739  T
Q  201 a 201  Q
    |    
T  111738 a 111738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 91201 - 91257
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 57  Q
    ||||||||||||||| ||  |||| |||||||| ||||| ||| |||||||||||||    
T  91201 tctaaggtaagggtgggatcatctttcaataatgataatatatgatttctgaaaatt 91257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 96927 - 96983
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 57  Q
    ||||||||||||||| ||  |||| |||||||| ||||| ||| |||||||||||||    
T  96927 tctaaggtaagggtgggatcatctttcaataatgataatatatgatttctgaaaatt 96983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 168; Significance: 4e-90; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 2 - 201
Target Start/End: Original strand, 11850 - 12049
Alignment:
Q  2 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtt 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  11850 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagagttagggtt 11949  T
Q  102 taatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 201  Q
    | ||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  11950 tgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatcttcagaatgaaaacttaatctttgttgttgctgtgatcata 12049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 111742 - 111563
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  111742 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggt 111643  T
Q  101 ttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 181  Q
    || ||||||||||||| ||||| |||||| ||||| |||||||||  ||||||| ||||||| ||||||||||||||||||    
T  111642 ttgatgatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatct 111563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 168; Significance: 4e-90; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 2 - 201
Target Start/End: Complemental strand, 22751197 - 22750998
Alignment:
Q  2 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtt 101  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  22751197 ctaaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 22751098  T
Q  102 taatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 201  Q
    | ||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22751097 tgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 22750998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 2 - 181
Target Start/End: Original strand, 38144536 - 38144714
Alignment:
Q  2 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtt 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  38144536 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtt 38144635  T
Q  102 taatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 181  Q
    | ||||||||||||| ||||| |||||| ||||| |||||||||  ||||||| ||||||| ||||||||||||||||||    
T  38144636 tgatgatgattctgaggggaa-tgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 38144714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 3 - 181
Target Start/End: Original strand, 28370055 - 28370232
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggttt 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  28370055 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 28370154  T
Q  103 aatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 181  Q
     ||||||||| ||| ||||| |||||| ||||| |||||||||  ||||||  ||||||| ||||||||||||||||||    
T  28370155 gatgatgattttgaggggaa-tgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatct 28370232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 3 - 181
Target Start/End: Complemental strand, 19512441 - 19512263
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttagggtt 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||    
T  19512441 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtt 19512342  T
Q  102 taatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 181  Q
    | ||||||||| ||| ||||| |||||| ||||| |||||||||  ||||||  ||||||| ||||||||||||||||||    
T  19512341 tgatgatgattttgaggggaa-tgggtattgatcatgttaattctattgtaacgtaatgtttagaatgaaaacttaatct 19512263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 2 - 116
Target Start/End: Complemental strand, 23528686 - 23528573
Alignment:
Q  2 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtt 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||  |||||||||    
T  23528686 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttagggtt 23528588  T
Q  102 taatgatgattctga 116  Q
    | |||||||||||||    
T  23528587 tgatgatgattctga 23528573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 18407944 - 18408008
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 67  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  18407944 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattgatctaattg 18408008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 22438746 - 22438803
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 58  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  22438746 tctaaggtaagggtgagactatctctcaataatcataatgtataatttctgaaaattg 22438803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 23111200 - 23111264
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 67  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  23111200 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23111264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 19236956 - 19236900
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 57  Q
    ||||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  19236956 tctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 19236900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 22461212 - 22461158
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 55  Q
    ||||||||||||||| || ||||| |||||| ||||||| |||||||||||||||    
T  22461212 tctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 22461158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 22467836 - 22467782
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 55  Q
    ||||||||||||||| || ||||| |||||| ||||||| |||||||||||||||    
T  22467836 tctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 22467782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 20781800 - 20781744
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 57  Q
    ||||||||||||||| || ||||| |||||||| ||||| ||| |||||||||||||    
T  20781800 tctaaggtaagggtgggattatctttcaataattataatatatgatttctgaaaatt 20781744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 17021912 - 17021942
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaata 31  Q
    |||||||||||||||||||||||||||||||    
T  17021912 tctaaggtaagggtgagactatctctcaata 17021942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 20773025 - 20772969
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 57  Q
    ||||||||||||||| || ||||| |||||| | ||||| ||| |||||||||||||    
T  20773025 tctaaggtaagggtgggattatctttcaatagttataatatatgatttctgaaaatt 20772969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 21663141 - 21663177
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcata 37  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  21663141 tctaaggtaagggtgaggctaactctcaataatcata 21663177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 22356902 - 22356938
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcata 37  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  22356902 tctaaggtaagggtgaggctaactctcaataatcata 22356938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 167; Significance: 2e-89; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 3 - 201
Target Start/End: Complemental strand, 23057993 - 23057795
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggttt 102  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  23057993 taaggtaagggtgagactatctctcgataatcataatctataattcctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 23057894  T
Q  103 aatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 201  Q
     ||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23057893 gatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 23057795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 2 - 201
Target Start/End: Original strand, 29614146 - 29614345
Alignment:
Q  2 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttgg-aaaataaattgagggttagggt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || |||||| ||||||||||||||||||||||    
T  29614146 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctagttgcataattttggaaaaataaattgagggttagggt 29614245  T
Q  101 ttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcat 200  Q
    || ||||||||| ||||||||| |||||||||||| ||||||||| ||||| ||  |||||| |||||||||||||||||||||||| ||||||||||||    
T  29614246 ttgatgatgattatgaagggaaatgggtaatgatcatgttaattctcttgt-attgaatgtttagaatgaaaacttaatctttgttgttgctgtgatcat 29614344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 3 - 181
Target Start/End: Complemental strand, 23839253 - 23839075
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagt-tttggaaaataaattgagggttagggtt 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||    
T  23839253 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtgtttggaagataaattgagggttagggtt 23839154  T
Q  102 taatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 181  Q
    | ||||||||||| ||||| | |||||| ||||| |||||||||  ||||||| ||||||||||||||||||||||||||    
T  23839153 tgatgatgattct-aaggggaatgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatct 23839075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 2 - 199
Target Start/End: Complemental strand, 18800493 - 18800296
Alignment:
Q  2 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaata-aattgagggttagggt 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  18800493 ctaatgtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaatagaattgagggttagggt 18800394  T
Q  101 ttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatca 199  Q
    || |||||||||||| |||||| || ||||||||| |||||||||  ||||||| | ||||||| ||||||| |||||||| | ||| || ||||||||    
T  18800393 ttgatgatgattctggagggaa-tgagtaatgatcatgttaattctgttgtaatgtgatgttcaaaatgaaatcttaatctatattgttgttgtgatca 18800296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 10986179 - 10986359
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttaggg 99  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||| ||||||||||||||||||    
T  10986179 tctaaggtaagggtgagactatctttcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaattgagggttaggg 10986278  T
Q  100 tttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 181  Q
    ||| ||||||||||||| ||||| |||||| ||||| |||||||||  ||||||| ||||||||||||||||||||||||||    
T  10986279 tttgatgatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatct 10986359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 3 - 201
Target Start/End: Complemental strand, 4477912 - 4477714
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttagggtt 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||| |||||||||||    
T  4477912 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtt 4477813  T
Q  102 taatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 201  Q
    | ||||||||||||| ||||| |||||| ||||| || ||||||  ||||||| ||||||| |||||||||||||||||| | ||| || ||||||||||    
T  4477812 tgatgatgattctgaggggaa-tgggtattgatcatgctaattctgttgtaatgtaatgtttagaatgaaaacttaatctatattgttgttgtgatcata 4477714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 2 - 135
Target Start/End: Original strand, 930095 - 930227
Alignment:
Q  2 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtt 101  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  |||||||| |||||||||||||||||||||||    
T  930095 ctaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgtatagttttgaaaaataaattgagggttagggtt 930194  T
Q  102 taatgatgattctgaagggaattgggtaatgatc 135  Q
    | |||||| |||||||||||| ||||||||||||    
T  930195 tgatgatgtttctgaagggaa-tgggtaatgatc 930227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 2 - 116
Target Start/End: Complemental strand, 12168418 - 12168305
Alignment:
Q  2 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtt 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||  |||||||||    
T  12168418 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttagggtt 12168320  T
Q  102 taatgatgattctga 116  Q
    | |||||||||||||    
T  12168319 tgatgatgattctga 12168305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 2 - 116
Target Start/End: Complemental strand, 19287327 - 19287214
Alignment:
Q  2 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtt 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||  |||||||||    
T  19287327 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttagggtt 19287229  T
Q  102 taatgatgattctga 116  Q
    | |||||||||||||    
T  19287228 tgatgatgattctga 19287214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 2 - 116
Target Start/End: Original strand, 19785869 - 19785982
Alignment:
Q  2 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtt 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||  ||||||||||||||||| |||  |||||||||    
T  19785869 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctagttgaatagttttggaaaataaaatgaaagttagggtt 19785967  T
Q  102 taatgatgattctga 116  Q
    | |||||||||||||    
T  19785968 tgatgatgattctga 19785982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 2 - 116
Target Start/End: Complemental strand, 19878511 - 19878398
Alignment:
Q  2 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtt 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||  |||||||||    
T  19878511 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttagggtt 19878413  T
Q  102 taatgatgattctga 116  Q
    | |||||||||||||    
T  19878412 tgatgatgattctga 19878398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 116
Target Start/End: Complemental strand, 19884287 - 19884174
Alignment:
Q  2 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtt 101  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||  |||||||||    
T  19884287 ctaaggttagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttagggtt 19884189  T
Q  102 taatgatgattctga 116  Q
    | |||||||||||||    
T  19884188 tgatgatgattctga 19884174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 34639985 - 34640069
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataa 85  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  34639985 tctaaggtaagggtgagactatctctcaataatcttaatctataatttctgaaaattgacctaattgaatagttttggaaaataa 34640069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 34646659 - 34646743
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataa 85  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  || |||||||||||||    
T  34646659 tctaaggtaagggtgagactatctctcaataatcttaatctataatttctgaaaattgacctaattgaataattttggaaaataa 34646743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 201
Target Start/End: Original strand, 21565214 - 21565410
Alignment:
Q  5 aggtaagggtgagactatctctcaataatc-ataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggttta 103  Q
    |||||||||||||||||||||||| ||||  ||||| | ||||||| |||||||||||||||||||||   |||   |  |||||||||||||||||||     
T  21565214 aggtaagggtgagactatctctcattaatagataatatttaatttcggaaaattgacctaattgcttaaccttgaggataaaattgagggttagggtttg 21565313  T
Q  104 atgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 201  Q
    ||||||||||| ||||| | |||||||||||| ||||||||   ||||||| | | |||| |||||||| |||||||| |  || |||||||||||||    
T  21565314 atgatgattct-aaggggaatgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctatactgttgctgtgatcata 21565410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 25469703 - 25469816
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||  | ||||||||||||||  |||   |||||||    
T  25469703 tctaaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggttttggaaaataatatgaaaattagggt 25469800  T
Q  101 ttaatgatgattctga 116  Q
    || ||||| |||||||    
T  25469801 ttgatgataattctga 25469816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 24512842 - 24512899
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 58  Q
    |||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||    
T  24512842 tctaaggtgagggtgagactatctctcaataatcatagtatataatttctgaaaattg 24512899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 9187550 - 9187498
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 55  Q
    |||||||||||||||||||||||||||||||| ||||  ||||||||||||||    
T  9187550 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaa 9187498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 25348542 - 25348486
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 59  Q
    ||||||||||||||||||||||||||||||| ||| | || ||||||||||||||||    
T  25348542 taaggtaagggtgagactatctctcaataataatagtatagaatttctgaaaattga 25348486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 25598697 - 25598643
Alignment:
Q  5 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 59  Q
    ||||||||||||||||| |||||||| |||||||| |||| ||||||||||||||    
T  25598697 aggtaagggtgagactaactctcaatgatcataatatatattttctgaaaattga 25598643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 25397228 - 25397172
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 59  Q
    ||||||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  25397228 taaggtaagggtgaggctaactctcgatgatcataatatataatttctgaaaattga 25397172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 31252479 - 31252413
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 67  Q
    |||||||||||||||||| ||||| | ||| || ||||| ||||||||||||||||| | |||||||    
T  31252479 tctaaggtaagggtgagattatcttttaatgattataatatataatttctgaaaattaatctaattg 31252413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 19471335 - 19471391
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 59  Q
    ||||||||||||||| ||| ||||| || |||||||| ||||||||||| |||||||    
T  19471335 taaggtaagggtgaggctacctctcgatgatcataatatataatttctggaaattga 19471391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 11288667 - 11288758
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaaattgacctaattgcttagttttggaaaataaattgag 91  Q
    ||||||||||||||| || ||||| ||||| ||| |||| ||||||||||| |||||| ||||||  |  ||||| | ||||||||||||||    
T  11288667 tctaaggtaagggtgggattatctttcaatgatcttaatatataatttctgaaaaattaacctaaaagaatagttcttgaaaataaattgag 11288758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 2286769 - 2286823
Alignment:
Q  5 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 59  Q
    ||||||||||||||||| |||||||| ||  |||| ||||| |||||||||||||    
T  2286769 aggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattga 2286823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 15458546 - 15458492
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 55  Q
    ||||||||||||||| || ||||| ||||| || ||||| |||||||||||||||    
T  15458546 tctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaa 15458492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 15465141 - 15465087
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 55  Q
    ||||||||||||||| || ||||| ||||| || ||||| |||||||||||||||    
T  15465141 tctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaa 15465087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 37
Target Start/End: Complemental strand, 18659484 - 18659450
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcata 37  Q
    ||||||||||||||||||| |||||||||||||||    
T  18659484 taaggtaagggtgagactaactctcaataatcata 18659450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 37
Target Start/End: Complemental strand, 24441707 - 24441673
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcata 37  Q
    ||||||||||||||||||| |||||||||||||||    
T  24441707 taaggtaagggtgagactaactctcaataatcata 24441673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 28288508 - 28288537
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaat 30  Q
    ||||||||||||||||||||||||||||||    
T  28288508 tctaaggtaagggtgagactatctctcaat 28288537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 29847278 - 29847314
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcata 37  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  29847278 tctaaggtaagggtgaggctaactctcaataatcata 29847314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 148; Significance: 4e-78; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 2 - 201
Target Start/End: Complemental strand, 1233 - 1036
Alignment:
Q  2 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtt 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  1233 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttagggtt 1135  T
Q  102 taatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 201  Q
    | |||| |||| ||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  1134 tgatgaggattatgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatc-ttgttgttgctgtgatcata 1036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 148; Significance: 4e-78; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 2 - 201
Target Start/End: Complemental strand, 50234 - 50037
Alignment:
Q  2 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtt 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  50234 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttagggtt 50136  T
Q  102 taatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 201  Q
    | |||| |||| ||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  50135 tgatgaggattatgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatc-ttgttgttgctgtgatcata 50037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 140; Significance: 2e-73; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 2 - 201
Target Start/End: Original strand, 8045832 - 8046030
Alignment:
Q  2 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtt 101  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  8045832 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttagggtt 8045930  T
Q  102 taatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 201  Q
    | | ||  ||||||||||||| ||||||| |||  ||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  8045931 tgacgagaattctgaagggaaatgggtaaagataatgttaattctcttgtaatataatgttcagaatgaaaacttaatccttgttgttgctgtgatcata 8046030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 2 - 201
Target Start/End: Complemental strand, 11848169 - 11847964
Alignment:
Q  2 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaa------ttgagggtt 95  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || |||||||| ||||| ||      |||||||||    
T  11848169 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaatcaattgagggtt 11848070  T
Q  96 agggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtg 195  Q
    ||||||| |||| |||||||||| | | |||||||||||| ||||||| |  || ||||||||||||||||||||||||||||||||||||| |||||||    
T  11848069 agggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatccttttataatataatgttcagaatgaaaacttaatctttgttgttgctgtg 11847970  T
Q  196 atcata 201  Q
    ||||||    
T  11847969 atcata 11847964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 53483761 - 53483646
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaat-tgagggttaggg 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||  ||||||| |||||  ||| |||   ||||||    
T  53483761 tctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaattaggg 53483663  T
Q  100 tttaatgatgattctga 116  Q
    ||| |||||||||||||    
T  53483662 tttgatgatgattctga 53483646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 15408196 - 15408139
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 58  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  15408196 tctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 15408139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 8834951 - 8834895
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 59  Q
    ||||||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  8834951 taaggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 8834895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 13888697 - 13888641
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 59  Q
    ||||||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  13888697 taaggtaagggtgaggctaactctcaatgatcataatgtataatttctgaaaattga 13888641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 14486713 - 14486661
Alignment:
Q  5 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 57  Q
    |||||||||||||||||||  ||||| |||||||| |||||||||||||||||    
T  14486713 aggtaagggtgagactatccttcaatgatcataatatataatttctgaaaatt 14486661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 15245271 - 15245215
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 59  Q
    ||||||||||||||| ||| |||||||| ||| |||| |||||||||||||||||||    
T  15245271 taaggtaagggtgaggctaactctcaatgatcgtaatatataatttctgaaaattga 15245215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 59
Target Start/End: Original strand, 22724691 - 22724742
Alignment:
Q  8 taagggtgagactatctctcaataatcataatctataatttctgaaaattga 59  Q
    |||||||||||||||||||||||||| ||| | || ||||||||||||||||    
T  22724691 taagggtgagactatctctcaataataatagtatagaatttctgaaaattga 22724742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 15308176 - 15308120
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 59  Q
    |||| |||||||||| ||| |||||||| ||| |||| |||||||||||||||||||    
T  15308176 taagttaagggtgaggctaactctcaatgatcgtaatatataatttctgaaaattga 15308120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 16146829 - 16146885
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 57  Q
    ||||||||||||||| || ||||| |||||| ||||||| | |||||||||||||||    
T  16146829 tctaaggtaagggtgggattatctttcaatagtcataatatgtaatttctgaaaatt 16146885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 27906322 - 27906266
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 57  Q
    |||||| |||||||| || ||||| ||||| |||||||| |||||||||||||||||    
T  27906322 tctaagataagggtgggattatctttcaatgatcataatgtataatttctgaaaatt 27906266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 14912139 - 14912081
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 59  Q
    |||||||||||||| |||||| |||||||| ||  |||| ||||| |||||||||||||    
T  14912139 tctaaggtaagggttagactaactctcaatgattgtaatatataacttctgaaaattga 14912081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 33
Target Start/End: Complemental strand, 15069811 - 15069781
Alignment:
Q  3 taaggtaagggtgagactatctctcaataat 33  Q
    |||||||||||||||||||||||||||||||    
T  15069811 taaggtaagggtgagactatctctcaataat 15069781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 33
Target Start/End: Complemental strand, 15076411 - 15076381
Alignment:
Q  3 taaggtaagggtgagactatctctcaataat 33  Q
    |||||||||||||||||||||||||||||||    
T  15076411 taaggtaagggtgagactatctctcaataat 15076381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 15747556 - 15747592
Alignment:
Q  2 ctaaggtaagggtgagactatctctcaataatcataa 38  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  15747556 ctaaggtaagggtgagactaactctcaataattataa 15747592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 5 - 201
Target Start/End: Original strand, 14398 - 14595
Alignment:
Q  5 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagtttt-ggaaaataaattgagggttagggttta 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||     
T  14398 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttg 14497  T
Q  104 atgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 201  Q
    ||||||||||||||||||| |||||||||||| |||||||||  ||||||| | |||||| ||||||||||||||||| || || |||||||||||||    
T  14498 atgatgattctgaagggaaatgggtaatgatcatgttaattctgttgtaatgtgatgttccgaatgaaaacttaatctatgctgttgctgtgatcata 14595  T

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Target: scaffold0924 (Bit Score: 133; Significance: 3e-69; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 2 - 201
Target Start/End: Original strand, 750 - 949
Alignment:
Q  2 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttagggt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  750 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaaaataaattgagggttagggt 849  T
Q  101 ttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcat 200  Q
    || |||| |||| ||||||||| |||||||||||| || |||| | ||||||||||||||||||| || ||||||||||| |||||| || |||||||||    
T  850 ttgatgaggattatgaagggaaatgggtaatgatcatgataatactcttgtaatataatgttcaggataaaaacttaatc-ttgttgttgatgtgatcat 948  T

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Target: chr8 (Bit Score: 129; Significance: 8e-67; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 44477679 - 44477500
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  44477679 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggt 44477580  T
Q  101 ttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 181  Q
    || ||||||||| ||| ||||| |||||| ||||| |||||||||  ||||||  ||||||| ||||||||||||||||||    
T  44477579 ttgatgatgattttgaggggaa-tgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatct 44477500  T

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Target: chr8; HSP #2
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 44492837 - 44492658
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  44492837 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggt 44492738  T
Q  101 ttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 181  Q
    || ||||||||| ||| ||||| |||||| ||||| |||||||||  ||||||  ||||||| ||||||||||||||||||    
T  44492737 ttgatgatgattttgaggggaa-tgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatct 44492658  T

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Target: chr8; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 2 - 182
Target Start/End: Complemental strand, 23866670 - 23866490
Alignment:
Q  2 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtt 101  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  23866670 ctaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttagggtt 23866572  T
Q  102 taatgatgattctgaagggaattgggtaatgatcgtgttaattc-ccttgtaatataatgttcagaatgaaaacttaatctt 182  Q
    | ||||||||| ||||| ||| |||||||||||| |||||||||   |||||||||||||||||||||  ||||||||||||    
T  23866571 tgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatctt 23866490  T

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Target: chr8; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 5 - 181
Target Start/End: Original strand, 8727735 - 8727911
Alignment:
Q  5 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttagggttta 103  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||     
T  8727735 aggtaagggtgagattatccctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttg 8727834  T
Q  104 atgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 181  Q
    | ||||||||||| ||| | |||||| ||||| |||||||||  ||||||| ||||||||||||||||||||||||||    
T  8727835 acgatgattctgaggggta-tgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatct 8727911  T

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Target: chr8; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 116
Target Start/End: Complemental strand, 17054644 - 17054533
Alignment:
Q  4 aaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggttta 103  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||  ||||||||||||||||  |||  ||||||||||     
T  17054644 aaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataagatgaaagttagggtttg 17054546  T
Q  104 atgatgattctga 116  Q
    |||||||||||||    
T  17054545 atgatgattctga 17054533  T

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Target: chr8; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 23482053 - 23482117
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 67  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  23482053 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23482117  T

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Target: chr8; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 18614327 - 18614271
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 59  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  18614327 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattga 18614271  T

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Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 94 - 181
Target Start/End: Original strand, 27940946 - 27941032
Alignment:
Q  94 ttagggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 181  Q
    ||||||||| ||||||||||||| |||||| ||||| ||||| |||||||||  ||||||| |||||||||||||||||| |||||||    
T  27940946 ttagggtttgatgatgattctgaggggaat-gggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaatttaatct 27941032  T

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Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 39364975 - 39364919
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 59  Q
    ||||||||||||||||||||||||||||||| ||| | || ||||||||||||||||    
T  39364975 taaggtaagggtgagactatctctcaataataatagtatagaatttctgaaaattga 39364919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 29643386 - 29643440
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 57  Q
    |||||||||||||||| ||||| |||||||||||||| | |||||||||||||||    
T  29643386 taaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 29643440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 14056562 - 14056619
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 58  Q
    ||||||||||||||||||||||||||||||||| ||| | | ||| ||||||||||||    
T  14056562 tctaaggtaagggtgagactatctctcaataataatagtatgtaaattctgaaaattg 14056619  T

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Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 25112033 - 25111976
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 58  Q
    ||||||||||||||||||||||||||||||||| ||| | | ||| ||||||||||||    
T  25112033 tctaaggtaagggtgagactatctctcaataataatagtatgtaaattctgaaaattg 25111976  T

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Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 24320669 - 24320725
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 57  Q
    ||||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  24320669 tctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 24320725  T

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Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 21931752 - 21931696
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 59  Q
    ||||||||||||||| ||| |||||||| || ||||| ||||| |||||||||||||    
T  21931752 taaggtaagggtgaggctaactctcaatgattataatatataacttctgaaaattga 21931696  T

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Target: chr2 (Bit Score: 127; Significance: 1e-65; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 3 - 181
Target Start/End: Complemental strand, 6483772 - 6483595
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggttt 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  6483772 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 6483673  T
Q  103 aatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 181  Q
     ||||||||| ||| ||||| |||||| ||||| |||||||||  ||||||  ||||||| ||||||||||||||||||    
T  6483672 gatgatgattttgaggggaa-tgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatct 6483595  T

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Target: chr2; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 3 - 181
Target Start/End: Complemental strand, 6487239 - 6487062
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggttt 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  6487239 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 6487140  T
Q  103 aatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 181  Q
     ||||||||| ||| ||||| |||||| ||||| |||||||||  ||||||  ||||||| ||||||||||||||||||    
T  6487139 gatgatgattttgaggggaa-tgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatct 6487062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 3 - 201
Target Start/End: Original strand, 19661454 - 19661651
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggttt 102  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  19661454 taaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 19661553  T
Q  103 aatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 201  Q
     ||||||||||||| ||||| |||||| ||||| |||||||||  ||||||| ||||||| |||||||||||||||||| | ||| || ||||||||||    
T  19661554 gatgatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatattgttgttgtgatcata 19661651  T

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Target: chr2; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 2 - 171
Target Start/End: Complemental strand, 26583882 - 26583715
Alignment:
Q  2 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtt 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |    
T  26583882 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttagggct 26583784  T
Q  102 taatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaa 171  Q
    | ||||||||||||| |||||  ||||||||||| |||||| |   ||||||  | ||||||||||||||    
T  26583783 tgatgatgattctgaggggaa-agggtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaa 26583715  T

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Target: chr2; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 181
Target Start/End: Complemental strand, 23879060 - 23878885
Alignment:
Q  5 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaa 104  Q
    |||||||||||||||||||||||| |||| || || |||||||||  ||||||||||||||||||||   |||   | |||||||||||||||||||       
T  23879060 aggtaagggtgagactatctctcattaataattatatataatttcgaaaaattgacctaattgcttaaccttgaggattaaattgagggttagggttgt- 23878962  T
Q  105 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 181  Q
    |||||||||||| |||||| ||||||||||| ||||||||   ||||||| | ||||||||||||||| ||||||||    
T  23878961 tgatgattctgaggggaatggggtaatgatcatgttaattatgttgtaatgtgatgttcagaatgaaatcttaatct 23878885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 201
Target Start/End: Original strand, 23089057 - 23089253
Alignment:
Q  5 aggtaagggtgagactatctctcaataatc-ataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggttta 103  Q
    |||||||||||||||||||||||| ||||  ||||| | ||||||| |||||||||||||||||||||   |||   |  |||||||||||||||||||     
T  23089057 aggtaagggtgagactatctctcattaatagataatatttaatttcggaaaattgacctaattgcttaaccttgaggataaaattgagggttagggtttg 23089156  T
Q  104 atgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 201  Q
    ||||||||||| ||||| | |||||||||||| ||||||||   ||||||| | | |||| |||||||| |||||||| |  || |||||||||||||    
T  23089157 atgatgattct-aaggggaatgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctatactgttgctgtgatcata 23089253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 3 - 181
Target Start/End: Original strand, 23101463 - 23101641
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatc-ataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtt 101  Q
    |||||||||||||||||||||||||| ||||  ||||| | ||||||| ||||||||||||||||| |||   |||   |  ||||||||||||||||||    
T  23101463 taaggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgtttaaccttgaggataaaattgagggttagggtt 23101562  T
Q  102 taatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 181  Q
    | ||||||||||||| ||||| |||||||||||| ||||||||   ||||||| | | |||| |||||||| ||||||||    
T  23101563 tgatgatgattctgaggggaa-tgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatct 23101641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 5706022 - 5706137
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaat-tgagggttaggg 99  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||  ||||||| |||||  ||| |||   ||||||    
T  5706022 tctaaggtaagggtgagactatctctcattaatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaattaggg 5706120  T
Q  100 tttaatgatgattctga 116  Q
    ||| |||||||||||||    
T  5706121 tttgatgatgattctga 5706137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 23265197 - 23265133
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 67  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  23265197 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23265133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 23280265 - 23280201
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 67  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  23280265 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23280201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 21908414 - 21908353
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaa 64  Q
    |||||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||    
T  21908414 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatctaa 21908353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 10633 - 10577
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 57  Q
    ||||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  10633 tctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 10577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 24661632 - 24661576
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 59  Q
    ||||||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  24661632 taaggtaagggtgaggctaactctcgatgatcataatatataatttctgaaaattga 24661576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 25180928 - 25180984
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 57  Q
    ||||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  25180928 tctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 25180984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 26885238 - 26885133
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagtt-ttggaaaataaattgagggttaggg 99  Q
    ||||||||||||||| || ||||| ||||||||| |||| ||||||||||||||||| | ||||| |  ||||| ||||| || ||||||||  ||||||    
T  26885238 tctaaggtaagggtgggattatctttcaataatc-taatgtataatttctgaaaattaatctaatggaatagttcttggagaaaaaattgagaattaggg 26885140  T
Q  100 tttaatg 106  Q
    | |||||    
T  26885139 tataatg 26885133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 23168297 - 23168351
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 55  Q
    ||||||||||||||| || ||||| ||| | |||||||| |||||||||||||||    
T  23168297 tctaaggtaagggtgggattatctttcattgatcataatgtataatttctgaaaa 23168351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 23579554 - 23579608
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 55  Q
    ||||||||||||||| || ||||| ||| | |||||||| |||||||||||||||    
T  23579554 tctaaggtaagggtgggattatctttcattgatcataatgtataatttctgaaaa 23579608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 27207718 - 27207774
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 57  Q
    ||||||||||||||| || ||||| ||||| ||  |||| |||||||||||||||||    
T  27207718 tctaaggtaagggtgggattatctttcaatgattttaatgtataatttctgaaaatt 27207774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 124; Significance: 8e-64; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 2 - 180
Target Start/End: Complemental strand, 11397 - 11219
Alignment:
Q  2 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaata-aattgagggttagggt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  11397 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaatagaattgagggttagggt 11298  T
Q  101 ttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatc 180  Q
    || |||||||||||| |||||| || ||||||||| |||||||||  ||||||| | ||||||| ||||||| |||||||    
T  11297 ttgatgatgattctggagggaa-tgagtaatgatcatgttaattctgttgtaatgtgatgttcaaaatgaaatcttaatc 11219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 124; Significance: 8e-64; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 3 - 181
Target Start/End: Original strand, 20437024 - 20437202
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttagggtt 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||    
T  20437024 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtt 20437123  T
Q  102 taatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 181  Q
    | ||||||||||||| ||||| |||||| ||||| ||||||||   ||||||| ||||||||||||||||||||||||||    
T  20437124 tgatgatgattctgaggggaa-tgggtattgatcatgttaattatgttgtaatgtaatgttcagaatgaaaacttaatct 20437202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 116
Target Start/End: Complemental strand, 41112090 - 41111977
Alignment:
Q  2 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtt 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||| |||||||  |||  |||||||||    
T  41112090 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttgaaaaataagatgaaagttagggtt 41111992  T
Q  102 taatgatgattctga 116  Q
    | |||||||||||||    
T  41111991 tgatgatgattctga 41111977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 32651627 - 32651563
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 67  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  32651627 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 32651563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 18712854 - 18712790
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 67  Q
    ||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  18712854 taaggtatgggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 18712790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 19663517 - 19663572
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 58  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  19663517 taaggtaagggtgagactatctctcgataatcatagtatataatttctgaaaattg 19663572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 20805376 - 20805320
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 59  Q
    ||||||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  20805376 taaggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 20805320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 11158148 - 11158093
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 58  Q
    ||||||||||||||||||| |||||||| ||| |||| ||||||||||||||||||    
T  11158148 taaggtaagggtgagactaactctcaatgatcttaatatataatttctgaaaattg 11158093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 10811785 - 10811839
Alignment:
Q  5 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 59  Q
    ||||||||||||||||||||||||||||| ||| | || ||||||||||||||||    
T  10811785 aggtaagggtgagactatctctcaataataatagtgtagaatttctgaaaattga 10811839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 20851131 - 20851187
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 57  Q
    ||||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  20851131 tctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20851187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 20857758 - 20857814
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 57  Q
    ||||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  20857758 tctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20857814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 21706332 - 21706276
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 57  Q
    ||||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  21706332 tctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 21706276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 21710874 - 21710818
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 57  Q
    ||||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  21710874 tctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 21710818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 33
Target Start/End: Complemental strand, 24476380 - 24476350
Alignment:
Q  3 taaggtaagggtgagactatctctcaataat 33  Q
    |||||||||||||||||||||||||||||||    
T  24476380 taaggtaagggtgagactatctctcaataat 24476350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 33
Target Start/End: Original strand, 25091418 - 25091448
Alignment:
Q  3 taaggtaagggtgagactatctctcaataat 33  Q
    |||||||||||||||||||||||||||||||    
T  25091418 taaggtaagggtgagactatctctcaataat 25091448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 18271371 - 18271338
Alignment:
Q  4 aaggtaagggtgagactatctctcaataatcata 37  Q
    |||||||||||||||||| |||||||||||||||    
T  18271371 aaggtaagggtgagactaactctcaataatcata 18271338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 18276025 - 18275992
Alignment:
Q  4 aaggtaagggtgagactatctctcaataatcata 37  Q
    |||||||||||||||||| |||||||||||||||    
T  18276025 aaggtaagggtgagactaactctcaataatcata 18275992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 122; Significance: 1e-62; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 2 - 201
Target Start/End: Original strand, 1897 - 2095
Alignment:
Q  2 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaaattgacctaattgcttagttttggaaaataaattgagggttagggt 100  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||| ||||||||||||||    
T  1897 ctaaggtaagggtgagactatatctcaataatcataatctataatttctgaaaaattgacctaattgtatagttttggaaaataatttgagggttagggt 1996  T
Q  101 ttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcat 200  Q
    || ||||||||| ||| ||  | |||||||||||  ||||||||| |||||||| ||||||||| ||||||||||||||| |||||| ||||||||||||    
T  1997 ttgatgatgattttgatgg--aatgggtaatgattatgttaattctcttgtaatttaatgttcataatgaaaacttaatccttgttgttgctgtgatcat 2094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 2 - 201
Target Start/End: Original strand, 8574 - 8772
Alignment:
Q  2 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaaattgacctaattgcttagttttggaaaataaattgagggttagggt 100  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||| ||||||||||||||    
T  8574 ctaaggtaagggtgagactatatctcaataatcataatctataatttctgaaaaattgacctaattgtatagttttggaaaataatttgagggttagggt 8673  T
Q  101 ttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcat 200  Q
    || ||||||||| ||| ||  | |||||||||||  ||||||||| |||||||| ||||||||| ||||||||||||||| |||||| ||||||||||||    
T  8674 ttgatgatgattatgatgg--aatgggtaatgattatgttaattctcttgtaatttaatgttcaaaatgaaaacttaatccttgttgttgctgtgatcat 8771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 2 - 201
Target Start/End: Complemental strand, 346 - 149
Alignment:
Q  2 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtt 101  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  346 ctaaggtaagggtgagactatctctcaataaccataatctataatttctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttagggtt 248  T
Q  102 taatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 201  Q
    | ||||||||||||| ||||| |||||||||||| ||||||||  |||||| |||  |||||||| |||| ||||||||| ||||  || ||||||||||    
T  247 tgatgatgattctgaggggaa-tgggtaatgatcatgttaattttcttgtattatggtgttcagattgaagacttaatctatgttattgatgtgatcata 149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 10194 - 10374
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttaggg 99  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||| |||||||||    
T  10194 tctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttaggg 10293  T
Q  100 tttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 181  Q
    ||| ||||||||||||| ||||| |||||| ||||| |||||||||  ||||||| ||||||| ||||||||||||||||||    
T  10294 tttgatgatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatct 10374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 1524 - 1704
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttaggg 99  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||| |||||||||    
T  1524 tctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttaggg 1623  T
Q  100 tttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 181  Q
    ||| ||||||||||||| ||||| |||||| ||||| |||||||||  ||||||| ||||||| ||||||||||||||||||    
T  1624 tttgatgatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatct 1704  T

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Target: scaffold0090 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 2 - 200
Target Start/End: Complemental strand, 18225 - 18026
Alignment:
Q  2 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttagggt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||| |||    
T  18225 ctaaggtaagggtgagactatctctcaataatcataatctataatttttgaaaattgacctaattgcttagctttaggaaaataaattgagggttaaggt 18126  T
Q  101 ttaatgatgattctgaagggaattgggtaatgatcgtgttaattc-ccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatca 199  Q
    |||||||||||||| | ||||| | ||||||| || |||||||||   ||||||| | |||| |||||||||||||||| || ||||| |||||||||||    
T  18125 ttaatgatgattctaacgggaaat-ggtaatggtcatgttaattctgtttgtaatgtgatgtccagaatgaaaacttaacctatgttgttgctgtgatca 18027  T

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Target: scaffold0154 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 2 - 142
Target Start/End: Complemental strand, 30913 - 30772
Alignment:
Q  2 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaat-aaattgagggttagggt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  | ||||||||| |||||||    
T  30913 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaggtaaaattgaggattagggt 30814  T
Q  101 ttaatgatgattctgaagggaattgggtaatgatcgtgttaa 142  Q
    || ||||||||| ||| |||||| | |||| |||| ||||||    
T  30813 ttgatgatgattttgaggggaatggtgtaacgatcatgttaa 30772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 116
Target Start/End: Original strand, 1732 - 1845
Alignment:
Q  2 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtt 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||  ||||||||||||||||  |||  |||||||||    
T  1732 ctaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatgaaagttagggtt 1830  T
Q  102 taatgatgattctga 116  Q
    | |||||||||||||    
T  1831 tgatgatgattctga 1845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 116
Target Start/End: Original strand, 5755 - 5868
Alignment:
Q  2 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtt 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||  ||||||||||||||||  |||  |||||||||    
T  5755 ctaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatgaaagttagggtt 5853  T
Q  102 taatgatgattctga 116  Q
    | |||||||||||||    
T  5854 tgatgatgattctga 5868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 199
Target Start/End: Original strand, 3295 - 3490
Alignment:
Q  5 aggtaagggtgagactatctctcaataatc-ataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggttta 103  Q
    |||||||||||||||||||||||| ||||  ||||| | ||||||| |||||||||||||||||||||   ||||  |  |||||||||||||||||||     
T  3295 aggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgcttaaccttggggataaaattgagggttagggtttg 3394  T
Q  104 atgatgattctgaagggaattgggtaatg-atcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatca 199  Q
    ||||||||||||| ||||| ||||||||| ||| ||||||||   ||||||| | ||||||||||||||| |||||||| |  || |||||||||||    
T  3395 atgatgattctgaggggaa-tgggtaatgaatcatgttaattttgttgtaatgtgatgttcagaatgaaatcttaatctatactgttgctgtgatca 3490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 68; Significance: 2e-30; HSPs: 4)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 85
Target Start/End: Complemental strand, 987 - 904
Alignment:
Q  2 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataa 85  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||| ||||    
T  987 ctaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgcatagtcttggaagataa 904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 85
Target Start/End: Complemental strand, 8132 - 8049
Alignment:
Q  2 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataa 85  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||| ||||    
T  8132 ctaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgcatagtcttggaagataa 8049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 201
Target Start/End: Complemental strand, 899 - 846
Alignment:
Q  148 ttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 201  Q
    ||||||| | |||||||||||||||||||||||| ||||| |||||||||||||    
T  899 ttgtaatgtgatgttcagaatgaaaacttaatctgtgttgttgctgtgatcata 846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 201
Target Start/End: Complemental strand, 8044 - 7991
Alignment:
Q  148 ttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 201  Q
    ||||||| | |||||||||||||||||||||||| ||||| |||||||||||||    
T  8044 ttgtaatgtgatgttcagaatgaaaacttaatctgtgttgttgctgtgatcata 7991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 181
Target Start/End: Original strand, 3624 - 3800
Alignment:
Q  5 aggtaagggtgagactatctctcaataatc-ataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggttta 103  Q
    |||||||||||||||||||||||| ||||  ||||| | ||||||| |||||||||||||||||||||   |||   |  |||||||||||||||||||     
T  3624 aggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgcttaaccttgaggataaaattgagggttagggtttg 3723  T
Q  104 atgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 181  Q
    ||||||||||||| ||| | |||||||||||| ||||||||   ||||||| | |||||| |||||||| ||||||||    
T  3724 atgatgattctgaggggga-tgggtaatgatcatgttaattatgttgtaatgtgatgttcggaatgaaatcttaatct 3800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 45273 - 45386
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaat-tgagggttaggg 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||  ||||||| |||||  ||| |||   ||||||    
T  45273 tctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaattaggg 45371  T
Q  100 tttaatgatgattct 114  Q
    ||| |||||||||||    
T  45372 tttgatgatgattct 45386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 16875 - 16811
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 67  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  16875 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 16811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 116951 - 116887
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 67  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  116951 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 116887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 60474 - 60441
Alignment:
Q  4 aaggtaagggtgagactatctctcaataatcata 37  Q
    |||||||||||||||||| |||||||||||||||    
T  60474 aaggtaagggtgagactaactctcaataatcata 60441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 17700 - 17643
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 58  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  17700 tctaaggtaagggtgagactatctctcaataaccataatgtataatttctgaaaattg 17643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 40530 - 40587
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 58  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  40530 tctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 40587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 135530 - 135473
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 58  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  135530 tctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 135473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 8 - 72
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 67  Q
    |||||||||||||||||||||||||||||||| ||||  |||||||||||||||||| |||||||    
T  8 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 72  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 13687 - 13623
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 67  Q
    |||||||||||||||||||||||||||||||| ||||  |||||||||||||||||| |||||||    
T  13687 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 13623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 101928 - 101992
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 67  Q
    ||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||| |||||||    
T  101928 taaggtaagggtgagactatctctcaataatcatagtatataattcctgaaaattgatctaattg 101992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 22594 - 22646
Alignment:
Q  4 aaggtaagggtgagactatctctcaataatcataatctataatttctgaaaat 56  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  22594 aaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaat 22646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 34276 - 34331
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 58  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  34276 taaggtaagggtgagactatctctcgataatcatagtatataatttctgaaaattg 34331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 35437 - 35495
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 59  Q
    |||||||||||||| |||||| |||||||| ||  |||| ||||| |||||||||||||    
T  35437 tctaaggtaagggtaagactaactctcaatgattgtaatgtataacttctgaaaattga 35495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 12352 - 12296
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 59  Q
    ||||||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  12352 taaggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 12296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 1441 - 1378
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaatt 66  Q
    |||||||||||||||||||||| ||||| ||||| || |||||||| |||||||||| ||||||    
T  1441 taaggtaagggtgagactatctttcaatgatcatgatatataatttttgaaaattgatctaatt 1378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 14997 - 15052
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 58  Q
    ||||||||||||||||||| |||||||| ||| |||| ||||||||||||||||||    
T  14997 taaggtaagggtgagactaactctcaatgatcttaatatataatttctgaaaattg 15052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 9392 - 9336
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 57  Q
    ||||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  9392 tctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 9336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 10295 - 10239
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 57  Q
    |||||||||||||||||| |||||  ||||||||||||| | |||||||||||||||    
T  10295 tctaaggtaagggtgagattatcttccaataatcataatatgtaatttctgaaaatt 10239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 135494 - 135438
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 57  Q
    ||||||||||| |||||| ||||| |||||| ||||||| |||||||||||||||||    
T  135494 tctaaggtaagcgtgagattatctttcaatagtcataatatataatttctgaaaatt 135438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 163388 - 163352
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcata 37  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  163388 tctaaggtaagggtgaggctaactctcaataatcata 163352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 493027 - 493082
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 57  Q
    |||||||||||||||||| ||||| ||||||||| |||| |||||||||||||||||    
T  493027 tctaaggtaagggtgagattatctttcaataatc-taatgtataatttctgaaaatt 493082  T

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Target: scaffold0815 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 1504 - 1453
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 54  Q
    ||||||||||||||||||| |||||||| ||| |||| ||||||||||||||    
T  1504 taaggtaagggtgagactaactctcaatgatcttaatgtataatttctgaaa 1453  T

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Target: scaffold0634 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 201
Target Start/End: Complemental strand, 3558 - 3519
Alignment:
Q  162 tcagaatgaaaacttaatctttgttgctgctgtgatcata 201  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  3558 tcagaatgaaaacttaatctttgttgttgctgtgatcata 3519  T

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Target: scaffold0096 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 39508 - 39563
Alignment:
Q  4 aaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 59  Q
    |||||||||||||| ||| |||||||| |||||||| ||||||||| |||||||||    
T  39508 aaggtaagggtgaggctaactctcaatgatcataatatataatttcagaaaattga 39563  T

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Target: scaffold1318 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 1913 - 1967
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 57  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  1913 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 1967  T

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Target: scaffold0609 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 5856 - 5922
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 67  Q
    ||||||||||||||| || ||||| ||||| || ||||| ||||||||||||||||| | |||||||    
T  5856 tctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaattaatctaattg 5922  T

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Target: scaffold0335 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 2628 - 2684
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 59  Q
    ||||||||||||||| ||| |||||||| || ||||| ||||| |||||||||||||    
T  2628 taaggtaagggtgaggctaactctcaatgattataatatataacttctgaaaattga 2684  T

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Target: scaffold0261 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 23568 - 23624
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 57  Q
    ||||||||||||||| || ||||| | ||| |||||||| |||||||||||||||||    
T  23568 tctaaggtaagggtgggattatctttgaatgatcataatgtataatttctgaaaatt 23624  T

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Target: scaffold0053 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 79489 - 79545
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 57  Q
    ||||||||||||||| || ||||| |||||| ||||||| | |||||||||||||||    
T  79489 tctaaggtaagggtgggattatctttcaatagtcataatatgtaatttctgaaaatt 79545  T

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Target: scaffold2054 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 91
Target Start/End: Complemental strand, 770 - 680
Alignment:
Q  2 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaaattgacctaattgcttagttttggaaaataaattgag 91  Q
    |||||||||||||| || ||||| ||||| ||| |||| ||||||||||| |||||| ||||||  |  ||||| | ||||||||||||||    
T  770 ctaaggtaagggtgggattatctttcaatgatcttaatatataatttctgaaaaattaacctaaaagaatagttcttgaaaataaattgag 680  T

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Target: scaffold0249 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 13893 - 13947
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 55  Q
    ||||||||||||||| || ||||| ||||| || ||||| |||||||||||||||    
T  13893 tctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaa 13947  T

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Target: scaffold0481 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 676 - 721
Alignment:
Q  4 aaggtaagggtgagactatctctcaataatcataatctataatttc 49  Q
    |||||||||||||||||| |||||||| ||| |||| |||||||||    
T  676 aaggtaagggtgagactaactctcaatgatcttaatgtataatttc 721  T

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Target: scaffold0962 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 614 - 650
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcata 37  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  614 tctaaggtaagggtgaggctaactctcaataatcata 650  T

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Target: scaffold0600 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0600
Description:

Target: scaffold0600; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 788 - 732
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 59  Q
    ||||||| ||||||| ||| |||||||| || ||||| ||||| |||||||||||||    
T  788 taaggtaggggtgaggctaactctcaatgattataatatataacttctgaaaattga 732  T

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Target: scaffold0453 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 10549 - 10605
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 57  Q
    ||||||||||| ||| || ||||| ||||| ||| |||| |||||||||||||||||    
T  10549 tctaaggtaagtgtgggattatctttcaatgatcttaatgtataatttctgaaaatt 10605  T

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Target: scaffold0422 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 4014 - 3962
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaa 53  Q
    ||||||||||||||||||||| |  |||||||||||| | ||||| |||||||    
T  4014 tctaaggtaagggtgagactaacattcaataatcatagtgtataaattctgaa 3962  T

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Target: scaffold0181 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 25519 - 25555
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcata 37  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  25519 tctaaggtaagggtgaggctaactctcaataatcata 25555  T

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Target: scaffold0180 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 11681 - 11630
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcataa--tctataatttctga 52  Q
    ||||||||||||||||||| ||||||||||| ||||  | ||||||||||||    
T  11681 taaggtaagggtgagactaactctcaataattataaattatataatttctga 11630  T

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Target: scaffold0131 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 1053 - 997
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 57  Q
    ||||||||||||||| ||  ||||||||||| | ||||| ||| |||||||||||||    
T  1053 tctaaggtaagggtgggatcatctctcaatagtgataatatatgatttctgaaaatt 997  T

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Target: scaffold0072 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 49969 - 50025
Alignment:
Q  1 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 57  Q
    ||||||||||||||| || ||||| |||||| ||||||| | |||||||| ||||||    
T  49969 tctaaggtaagggtgggattatctttcaatagtcataatatgtaatttctaaaaatt 50025  T

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Target: scaffold0034 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 73337 - 73285
Alignment:
Q  5 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 57  Q
    ||||||||||| || ||||| ||||| |||||||| |||||||| ||||||||    
T  73337 aggtaagggtgggattatctttcaatgatcataatgtataatttatgaaaatt 73285  T

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Target: scaffold0031 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 121958 - 121902
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 59  Q
    ||||||||||||||| ||| |||||||| || ||||| |||||  ||||||||||||    
T  121958 taaggtaagggtgaggctaactctcaatgattataatatataaaatctgaaaattga 121902  T

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Target: scaffold0031; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 132834 - 132778
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 59  Q
    ||||||||||||||| ||| |||||||| || ||||| |||||  ||||||||||||    
T  132834 taaggtaagggtgaggctaactctcaatgattataatatataaaatctgaaaattga 132778  T

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Target: scaffold0028 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 69801 - 69749
Alignment:
Q  3 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 55  Q
    ||||||||||||||||||| || ||||| ||| |||| |||||||| ||||||    
T  69801 taaggtaagggtgagactaactttcaatgatcttaatatataatttatgaaaa 69749  T

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