View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0350_high_4 (Length: 332)
Name: NF0350_high_4
Description: NF0350
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0350_high_4 |
 | |
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| [»] scaffold0231 (1 HSPs) |
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| [»] scaffold0207 (1 HSPs) |
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| [»] scaffold0004 (2 HSPs) |
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| [»] scaffold0411 (1 HSPs) |
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| [»] scaffold0056 (2 HSPs) |
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| [»] scaffold1186 (1 HSPs) |
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| [»] scaffold0005 (1 HSPs) |
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| [»] scaffold0676 (1 HSPs) |
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| [»] scaffold0220 (1 HSPs) |
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| [»] scaffold0026 (1 HSPs) |
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| [»] scaffold0594 (1 HSPs) |
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| [»] scaffold0108 (1 HSPs) |
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| [»] scaffold0149 (1 HSPs) |
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| [»] scaffold0139 (1 HSPs) |
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| [»] scaffold0048 (1 HSPs) |
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| [»] scaffold0878 (1 HSPs) |
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| [»] scaffold0853 (1 HSPs) |
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| [»] scaffold0431 (1 HSPs) |
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| [»] scaffold0328 (1 HSPs) |
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| [»] scaffold0174 (2 HSPs) |
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| [»] scaffold0061 (2 HSPs) |
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| [»] scaffold0031 (1 HSPs) |
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| [»] scaffold0098 (1 HSPs) |
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| [»] scaffold0205 (1 HSPs) |
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| [»] scaffold0086 (1 HSPs) |
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| [»] scaffold0037 (1 HSPs) |
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| [»] scaffold1941 (1 HSPs) |
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| [»] scaffold0802 (1 HSPs) |
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| [»] scaffold0555 (1 HSPs) |
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| [»] scaffold0414 (1 HSPs) |
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| [»] scaffold0379 (1 HSPs) |
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| [»] scaffold0241 (1 HSPs) |
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| [»] scaffold0148 (1 HSPs) |
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| [»] scaffold0028 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 170; Significance: 3e-91; HSPs: 25)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 22530459 - 22530202
Alignment:
| Q |
1 |
tcatcactactactactccaccacaccaaaac-caccgtcgcacctcccaccaaccctcgacctcacttctcttccccgtcaccctctttattttttctt |
99 |
Q |
| |
|
||||||| ||||| ||||||||||||||||| |||| || ||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||| |
|
|
| T |
22530459 |
tcatcaccactaccactccaccacaccaaaaaacaccctcacacctcccaccaatcctcgacctcacttcccttccccgttaccctctttattttttctt |
22530360 |
T |
|
| Q |
100 |
cccgcacctgacaaaacatcaaacctattttaaatatcctcttgaaagtttacccccaacatctttcccacacctttaacatcatccgacatagccttac |
199 |
Q |
| |
|
||| ||||||||| ||||||||||||||| |||||||| |||| || |||||||||||| ||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
22530359 |
cccacacctgacagaacatcaaacctattagaaatatccccttggaaatttacccccaacttctttcccatacctttaacatcatccgacatagccttac |
22530260 |
T |
|
| Q |
200 |
tacttccatgaagaaccaaccaattcgaccagtcgttattgacagaagattgacaacc |
257 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||| |
|
|
| T |
22530259 |
tacttccatgaagaaccaaccaatttgaccagtcgttattgagagaagattgagaacc |
22530202 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 29549202 - 29549459
Alignment:
| Q |
1 |
tcatcactactactactccaccacaccaaaaccaccgtcg-cacctcccaccaaccctcgacctcacttctcttccccgtcaccctctttattttttctt |
99 |
Q |
| |
|
||||||| || || |||| ||||||||||| ||||| || ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
29549202 |
tcatcaccacgaccactctaccacaccaaacccaccctccacacctcccaccaaccctcggcctcacttctcttccccatcaccctctttattttttctt |
29549301 |
T |
|
| Q |
100 |
cccgcacctgacaaaacatcaaacctattttaaatatcctcttgaaagtttacccccaacatctttcccacacctttaacatcatccgacatagccttac |
199 |
Q |
| |
|
|||||||||||||| |||| ||||||| ||| ||||| ||||||| || |||||||| |||||||||| ||||||||||||||||| |||||||||| |
|
|
| T |
29549302 |
cccgcacctgacaatacattaaacctactttgtgtatccccttgaaaattcacccccaatatctttcccattcctttaacatcatccgaaatagccttac |
29549401 |
T |
|
| Q |
200 |
tacttccatgaagaaccaaccaattcgaccagtcgttattgacagaagattgacaacc |
257 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||| | ||| |||||| |||| |
|
|
| T |
29549402 |
tacttccatgaagaaccaaccaattcgaccagtcattattaatagatgattgagaacc |
29549459 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 50 - 251
Target Start/End: Complemental strand, 6921270 - 6921069
Alignment:
| Q |
50 |
ccaaccctcgacctcacttctcttccccgtcaccctctttattttttcttcccgcacctgacaaaacatcaaacctattttaaatatcctcttgaaagtt |
149 |
Q |
| |
|
|||||||||||||| | ||||| | || |||||||||||||||||||| || || |||||||| |||||||||||||||| | ||||| ||||||| || |
|
|
| T |
6921270 |
ccaaccctcgaccttaactctctccaccatcaccctctttattttttctaccagctcctgacaacacatcaaacctattttgattatccccttgaaaatt |
6921171 |
T |
|
| Q |
150 |
tacccccaacatctttcccacacctttaacatcatccgacatagccttactacttccatgaagaaccaaccaattcgaccagtcgttattgacagaagat |
249 |
Q |
| |
|
|||| || || ||| |||| || ||||||||||||| | |||||| ||| | |||||||| || ||||||||||||||||| ||||| ||||| ||| |
|
|
| T |
6921170 |
caccctcaccaacttacccatccccctaacatcatccgataaagccttgctattaccatgaagtactaaccaattcgaccagtcattattaacagatgat |
6921071 |
T |
|
| Q |
250 |
tg |
251 |
Q |
| |
|
|| |
|
|
| T |
6921070 |
tg |
6921069 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 252 - 322
Target Start/End: Original strand, 17208536 - 17208606
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagattgatcgattgaaaggttctcttctctg |
322 |
Q |
| |
|
||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17208536 |
acaactcattattagagaaagctagtcccacccttaccttagattgatcgattgaaaggttctcttctctg |
17208606 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 252 - 302
Target Start/End: Original strand, 6156722 - 6156772
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagattgatcga |
302 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||||||||||||||||| |
|
|
| T |
6156722 |
acaacccattattagagaaagctagtcccacccttaccttagattgatcga |
6156772 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 252 - 314
Target Start/End: Original strand, 14442187 - 14442249
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagattgatcgattgaaaggttct |
314 |
Q |
| |
|
|||||||||||||| | ||||||||||| ||||||||||||||||||| ||| |||||||||| |
|
|
| T |
14442187 |
acaacccattattacagaaagctagtcccacccttaccttagattgattgatcgaaaggttct |
14442249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 252 - 302
Target Start/End: Complemental strand, 2841546 - 2841496
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagattgatcga |
302 |
Q |
| |
|
|||||||||||||||| |||||||||| |||||||||||||||||||||| |
|
|
| T |
2841546 |
acaacccattattagagaaagctagtcacacccttaccttagattgatcga |
2841496 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 252 - 302
Target Start/End: Original strand, 14520458 - 14520508
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagattgatcga |
302 |
Q |
| |
|
|||||||||||||| | ||||||||||| |||||||||||||||||||||| |
|
|
| T |
14520458 |
acaacccattattaaagaaagctagtcccacccttaccttagattgatcga |
14520508 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 252 - 295
Target Start/End: Complemental strand, 3527197 - 3527154
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagat |
295 |
Q |
| |
|
|||||||||||||||| ||||||||||| ||||||||||||||| |
|
|
| T |
3527197 |
acaacccattattagagaaagctagtcccacccttaccttagat |
3527154 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 297
Target Start/End: Complemental strand, 22841319 - 22841274
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagattg |
297 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||| |||||||| |
|
|
| T |
22841319 |
acaacccattattagagaaagctagtcccacccttacattagattg |
22841274 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 14641588 - 14641544
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagatt |
296 |
Q |
| |
|
|||||||||||||||| ||||||| ||| |||||||||||||||| |
|
|
| T |
14641588 |
acaacccattattagagaaagctaatcccacccttaccttagatt |
14641544 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 54875514 - 54875474
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttacctta |
292 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||||||| |
|
|
| T |
54875514 |
acaacccattattagagaaagctagtcccacccttacctta |
54875474 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 302
Target Start/End: Original strand, 5215659 - 5215709
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagattgatcga |
302 |
Q |
| |
|
||||| |||||||||| ||||||||| | |||||||||||| ||||||||| |
|
|
| T |
5215659 |
acaactcattattagagaaagctagtgccacccttaccttatattgatcga |
5215709 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 297
Target Start/End: Complemental strand, 12917346 - 12917301
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagattg |
297 |
Q |
| |
|
|||||||||||||||| |||| |||||| ||||||| ||||||||| |
|
|
| T |
12917346 |
acaacccattattagagaaagttagtcccacccttatcttagattg |
12917301 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 293
Target Start/End: Complemental strand, 14152439 - 14152398
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttag |
293 |
Q |
| |
|
||||| |||||||||| ||||||||||| ||||||||||||| |
|
|
| T |
14152439 |
acaactcattattagagaaagctagtcccacccttaccttag |
14152398 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 297
Target Start/End: Complemental strand, 45803371 - 45803326
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagattg |
297 |
Q |
| |
|
|||||||||||||||| ||||||||||| ||||| || |||||||| |
|
|
| T |
45803371 |
acaacccattattagagaaagctagtcccaccctaactttagattg |
45803326 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 6159417 - 6159461
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagatt |
296 |
Q |
| |
|
|||||||||||||||| ||||| |||| |||||||||||||||| |
|
|
| T |
6159417 |
acaacccattattagagaaagcgagtctcacccttaccttagatt |
6159461 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 13185917 - 13185957
Alignment:
| Q |
262 |
attagaaaaagctagtccgacccttaccttagattgatcga |
302 |
Q |
| |
|
|||||| |||| |||||| |||||||||||||||||||||| |
|
|
| T |
13185917 |
attagagaaagttagtcccacccttaccttagattgatcga |
13185957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 19568238 - 19568198
Alignment:
| Q |
262 |
attagaaaaagctagtccgacccttaccttagattgatcga |
302 |
Q |
| |
|
|||||| |||| |||||| |||||||||||||||||||||| |
|
|
| T |
19568238 |
attagagaaagttagtcccacccttaccttagattgatcga |
19568198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 29907651 - 29907695
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagatt |
296 |
Q |
| |
|
|||||||| ||||| | ||||||||||| |||||||||||||||| |
|
|
| T |
29907651 |
acaacccaatattaaagaaagctagtcccacccttaccttagatt |
29907695 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 29948817 - 29948861
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagatt |
296 |
Q |
| |
|
|||||||| ||||| | ||||||||||| |||||||||||||||| |
|
|
| T |
29948817 |
acaacccaatattaaagaaagctagtcccacccttaccttagatt |
29948861 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 29997971 - 29998015
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagatt |
296 |
Q |
| |
|
|||||||| ||||| | ||||||||||| |||||||||||||||| |
|
|
| T |
29997971 |
acaacccaatattaaagaaagctagtcccacccttaccttagatt |
29998015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 40808018 - 40808058
Alignment:
| Q |
262 |
attagaaaaagctagtccgacccttaccttagattgatcga |
302 |
Q |
| |
|
|||||| |||| |||||| |||||||||||||||||||||| |
|
|
| T |
40808018 |
attagagaaagttagtcccacccttaccttagattgatcga |
40808058 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 40812855 - 40812895
Alignment:
| Q |
262 |
attagaaaaagctagtccgacccttaccttagattgatcga |
302 |
Q |
| |
|
|||||| |||| |||||| |||||||||||||||||||||| |
|
|
| T |
40812855 |
attagagaaagttagtcccacccttaccttagattgatcga |
40812895 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 44274440 - 44274480
Alignment:
| Q |
262 |
attagaaaaagctagtccgacccttaccttagattgatcga |
302 |
Q |
| |
|
|||||| |||| |||||| |||||||||||||||||||||| |
|
|
| T |
44274440 |
attagagaaagttagtcccacccttaccttagattgatcga |
44274480 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 72; Significance: 1e-32; HSPs: 16)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 50 - 245
Target Start/End: Original strand, 54874533 - 54874728
Alignment:
| Q |
50 |
ccaaccctcgacctcacttctcttccccgtcaccctctttattttttcttcccgcacctgacaaaacatcaaacctattttaaatatcctcttgaaagtt |
149 |
Q |
| |
|
|||||||||| ||| || ||||| | || ||| ||||||||||||||||||| |||||||||| |||||||||||||||| ||||||| ||||||| || |
|
|
| T |
54874533 |
ccaaccctcggccttacctctctccaccatcaacctctttattttttcttccaacacctgacaacacatcaaacctattttgaatatccccttgaaaatt |
54874632 |
T |
|
| Q |
150 |
tacccccaacatctttcccacacctttaacatcatccgacatagccttactacttccatgaagaaccaaccaattcgaccagtcgttattgacaga |
245 |
Q |
| |
|
||||||| | |||||||| || ||||||||||||| | |||||| ||| | |||||||| || |||||| |||||||||||| ||| ||||| |
|
|
| T |
54874633 |
cacccccactaactttcccatccccctaacatcatccgataaagccttgctattaccatgaagtactaaccaactcgaccagtcgtaattaacaga |
54874728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 79 - 245
Target Start/End: Complemental strand, 33096279 - 33096113
Alignment:
| Q |
79 |
tcaccctctttattttttcttcccgcacctgacaaaacatcaaacctattttaaatatcctcttgaaagtttacccccaacatctttcccacacctttaa |
178 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||| ||| ||| | ||||| ||||||| || | ||||| || |||||||| | | ||| |
|
|
| T |
33096279 |
tcaccctctttattttttcttcccgcacctgacaacacatcgaactgattattcttatccccttgaaaattcaaccccaccacctttcccaaatccctaa |
33096180 |
T |
|
| Q |
179 |
catcatccgacatagccttactacttccatgaagaaccaaccaattcgaccagtcgttattgacaga |
245 |
Q |
| |
|
| ||| | |||||| ||| || ||||||||||||| ||||||||||| |||||| ||||| ||||| |
|
|
| T |
33096179 |
cgtcagctgacataacctcaccacttccatgaagagccaaccaattcatccagtcattattaacaga |
33096113 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 299
Target Start/End: Original strand, 9622500 - 9622548
Alignment:
| Q |
251 |
gacaacccattattagaaaaagctagtccgacccttaccttagattgat |
299 |
Q |
| |
|
||||||||||||||||| ||||||||||| ||||||||||||||||||| |
|
|
| T |
9622500 |
gacaacccattattagagaaagctagtcccacccttaccttagattgat |
9622548 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 252 - 302
Target Start/End: Original strand, 14631147 - 14631197
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagattgatcga |
302 |
Q |
| |
|
|||||||||||||||| |||||||||| |||||||||||||||||||||| |
|
|
| T |
14631147 |
acaacccattattagagaaagctagtctcacccttaccttagattgatcga |
14631197 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 252 - 302
Target Start/End: Original strand, 16296950 - 16297000
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagattgatcga |
302 |
Q |
| |
|
||||| |||||||||| ||||||||||| |||||||||||||||||||||| |
|
|
| T |
16296950 |
acaactcattattagagaaagctagtcccacccttaccttagattgatcga |
16297000 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 10273395 - 10273439
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagatt |
296 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
10273395 |
acaacccattattagagaaagctagtcccacccttaccttagatt |
10273439 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 252 - 295
Target Start/End: Original strand, 55583208 - 55583251
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagat |
295 |
Q |
| |
|
|||||||||||||||| ||||||||||| ||||||||||||||| |
|
|
| T |
55583208 |
acaacccattattagagaaagctagtcccacccttaccttagat |
55583251 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 306
Target Start/End: Original strand, 13847213 - 13847267
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagattgatcgattga |
306 |
Q |
| |
|
|||||||||||||||| |||||||||| ||||||||||||| || ||||||||| |
|
|
| T |
13847213 |
acaacccattattagagaaagctagtctcacccttaccttaggttaatcgattga |
13847267 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 122
Target Start/End: Complemental strand, 13154330 - 13154250
Alignment:
| Q |
41 |
cacctcccaccaaccctcgacctcacttctcttccccgtcaccctctttattttttcttcccgcacctgacaaaacatcaaa |
122 |
Q |
| |
|
|||||| |||||||||| | ||| ||||| ||| ||| || ||||||||||||||||||||| | |||||||| |||||||| |
|
|
| T |
13154330 |
cacctcacaccaacccttggcct-acttccctttcccatctccctctttattttttcttcccacccctgacaacacatcaaa |
13154250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 9639022 - 9639066
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagatt |
296 |
Q |
| |
|
||||| |||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
9639022 |
acaactcattattagagaaagctagtcccacccttaccttagatt |
9639066 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 12424330 - 12424290
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttacctta |
292 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||||||| |
|
|
| T |
12424330 |
acaacccattattagagaaagctagtcccacccttacctta |
12424290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 293
Target Start/End: Original strand, 26446219 - 26446260
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttag |
293 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||| |||| |
|
|
| T |
26446219 |
acaacccattattagagaaagctagtcctacccttactttag |
26446260 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 15115244 - 15115284
Alignment:
| Q |
262 |
attagaaaaagctagtccgacccttaccttagattgatcga |
302 |
Q |
| |
|
|||||| |||| |||||| |||||||||||||||||||||| |
|
|
| T |
15115244 |
attagagaaagttagtcccacccttaccttagattgatcga |
15115284 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 298
Target Start/End: Complemental strand, 15239850 - 15239810
Alignment:
| Q |
258 |
cattattagaaaaagctagtccgacccttaccttagattga |
298 |
Q |
| |
|
|||||||||| |||||||||| |||||||||||||||||| |
|
|
| T |
15239850 |
cattattagagaaagctagtctcacccttaccttagattga |
15239810 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 19434589 - 19434549
Alignment:
| Q |
262 |
attagaaaaagctagtccgacccttaccttagattgatcga |
302 |
Q |
| |
|
|||||| |||| |||||| |||||||||||||||||||||| |
|
|
| T |
19434589 |
attagagaaagttagtcccacccttaccttagattgatcga |
19434549 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 25513863 - 25513907
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagatt |
296 |
Q |
| |
|
||||| |||||||||| ||||||||||| ||| |||||||||||| |
|
|
| T |
25513863 |
acaactcattattagagaaagctagtcccaccattaccttagatt |
25513907 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0231 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0231
Description:
Target: scaffold0231; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 252 - 322
Target Start/End: Complemental strand, 17561 - 17491
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagattgatcgattgaaaggttctcttctctg |
322 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17561 |
acaatccattattagaaaaagctagtccgacccttaccttagattgatcgattgaaaggttctcttctctg |
17491 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 55; Significance: 1e-22; HSPs: 8)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 252 - 322
Target Start/End: Original strand, 18744886 - 18744956
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagattgatcgattgaaaggttctcttctctg |
322 |
Q |
| |
|
|||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
18744886 |
acaacccattattagagaaagttagtcccacccttaccttagattgatcgattgaaaggttcacttctctg |
18744956 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 262 - 322
Target Start/End: Complemental strand, 6551320 - 6551260
Alignment:
| Q |
262 |
attagaaaaagctagtccgacccttaccttagattgatcgattgaaaggttctcttctctg |
322 |
Q |
| |
|
|||||| |||| ||||| |||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
6551320 |
attagagaaagttagtctcacccttaccttagattgatcgattgaaaggttatcttctctg |
6551260 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 262 - 322
Target Start/End: Complemental strand, 21617958 - 21617898
Alignment:
| Q |
262 |
attagaaaaagctagtccgacccttaccttagattgatcgattgaaaggttctcttctctg |
322 |
Q |
| |
|
|||||| |||| |||||| |||||||||||||||| |||||| |||||||||||||||||| |
|
|
| T |
21617958 |
attagagaaagttagtcccacccttaccttagatttatcgatcgaaaggttctcttctctg |
21617898 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 32607356 - 32607312
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagatt |
296 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
32607356 |
acaacccattattagagaaagctagtcccacccttaccttagatt |
32607312 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 297
Target Start/End: Original strand, 16063763 - 16063808
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagattg |
297 |
Q |
| |
|
|||||||||||||||| |||| |||||| ||||||||||||||||| |
|
|
| T |
16063763 |
acaacccattattagagaaaggtagtcccacccttaccttagattg |
16063808 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 315
Target Start/End: Complemental strand, 20469206 - 20469153
Alignment:
| Q |
262 |
attagaaaaagctagtccgacccttaccttagattgatcgattgaaaggttctc |
315 |
Q |
| |
|
|||||| |||| |||||| ||||||||||||||||||||||| ||||| ||||| |
|
|
| T |
20469206 |
attagagaaagttagtcccacccttaccttagattgatcgatcgaaagcttctc |
20469153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 21398684 - 21398640
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagatt |
296 |
Q |
| |
|
|||||||||||||||| ||||||| ||| |||||||||||||||| |
|
|
| T |
21398684 |
acaacccattattagagaaagctaatcccacccttaccttagatt |
21398640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 23199247 - 23199207
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttacctta |
292 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||||||| |
|
|
| T |
23199247 |
acaacccattattagagaaagctagtcccacccttacctta |
23199207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 54; Significance: 5e-22; HSPs: 14)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 252 - 321
Target Start/End: Original strand, 21399729 - 21399798
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagattgatcgattgaaaggttctcttctct |
321 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||||||||||||||| | |||||||||||||||||| |
|
|
| T |
21399729 |
acaacccattattagagaaagctagtcccacccttaccttagattgatcaaatgaaaggttctcttctct |
21399798 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 252 - 321
Target Start/End: Original strand, 21794222 - 21794291
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagattgatcgattgaaaggttctcttctct |
321 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||||||||||||||| | |||||||||||||||||| |
|
|
| T |
21794222 |
acaacccattattagagaaagctagtcccacccttaccttagattgatcaaatgaaaggttctcttctct |
21794291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 262 - 322
Target Start/End: Complemental strand, 45469249 - 45469189
Alignment:
| Q |
262 |
attagaaaaagctagtccgacccttaccttagattgatcgattgaaaggttctcttctctg |
322 |
Q |
| |
|
|||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45469249 |
attagagaaagttagtctcacccttaccttagattgatcgattgaaaggttctcttctctg |
45469189 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 262 - 316
Target Start/End: Complemental strand, 6101783 - 6101729
Alignment:
| Q |
262 |
attagaaaaagctagtccgacccttaccttagattgatcgattgaaaggttctct |
316 |
Q |
| |
|
|||||| |||| |||||| ||| |||||||||||||||||||||||||||||||| |
|
|
| T |
6101783 |
attagagaaagttagtcccacctttaccttagattgatcgattgaaaggttctct |
6101729 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 22208281 - 22208325
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagatt |
296 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
22208281 |
acaacccattattagagaaagctagtcccacccttaccttagatt |
22208325 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 22345176 - 22345220
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagatt |
296 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
22345176 |
acaacccattattagagaaagctagtcccacccttaccttagatt |
22345220 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 22356836 - 22356880
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagatt |
296 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
22356836 |
acaacccattattagagaaagctagtcccacccttaccttagatt |
22356880 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 262 - 314
Target Start/End: Complemental strand, 36727068 - 36727016
Alignment:
| Q |
262 |
attagaaaaagctagtccgacccttaccttagattgatcgattgaaaggttct |
314 |
Q |
| |
|
|||||| |||| ||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
36727068 |
attagagaaagttagtctcacccttaccttagattgatcgattgaaaggttct |
36727016 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 302
Target Start/End: Complemental strand, 18816335 - 18816285
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagattgatcga |
302 |
Q |
| |
|
|||||||||| ||||| ||||||||||| |||||||||||| ||||||||| |
|
|
| T |
18816335 |
acaacccatttttagagaaagctagtcccacccttaccttatattgatcga |
18816285 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 322
Target Start/End: Complemental strand, 23900017 - 23899957
Alignment:
| Q |
262 |
attagaaaaagctagtccgacccttaccttagattgatcgattgaaaggttctcttctctg |
322 |
Q |
| |
|
|||||| |||| ||||| ||||||||||||||||||||||| ||||| ||||| |||||| |
|
|
| T |
23900017 |
attagagaaagttagtcacacccttaccttagattgatcgatcgaaagcttctcctctctg |
23899957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 297
Target Start/End: Complemental strand, 22610307 - 22610262
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagattg |
297 |
Q |
| |
|
||||| |||||||||| |||| |||||| ||||||||||||||||| |
|
|
| T |
22610307 |
acaactcattattagagaaagttagtcccacccttaccttagattg |
22610262 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 293
Target Start/End: Complemental strand, 36732452 - 36732411
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttag |
293 |
Q |
| |
|
|||||||||||||||| |||||||||| ||||||||||||| |
|
|
| T |
36732452 |
acaacccattattagagaaagctagtcacacccttaccttag |
36732411 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 292
Target Start/End: Original strand, 18834434 - 18834474
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttacctta |
292 |
Q |
| |
|
|||| ||||||||||| ||||||||||| |||||||||||| |
|
|
| T |
18834434 |
acaatccattattagagaaagctagtcccacccttacctta |
18834474 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 288
Target Start/End: Original strand, 22483798 - 22483834
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttac |
288 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||| |
|
|
| T |
22483798 |
acaacccattattagagaaagctagtcccacccttac |
22483834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 49; Significance: 5e-19; HSPs: 27)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 262 - 322
Target Start/End: Complemental strand, 48807355 - 48807295
Alignment:
| Q |
262 |
attagaaaaagctagtccgacccttaccttagattgatcgattgaaaggttctcttctctg |
322 |
Q |
| |
|
|||||| |||| |||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48807355 |
attagagaaagttagtcccacccttaccttagattgatcgattgaaaggttctcttctctg |
48807295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 262 - 322
Target Start/End: Complemental strand, 14218925 - 14218865
Alignment:
| Q |
262 |
attagaaaaagctagtccgacccttaccttagattgatcgattgaaaggttctcttctctg |
322 |
Q |
| |
|
|||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14218925 |
attagagaaagttagtctcacccttaccttagattgatcgattgaaaggttctcttctctg |
14218865 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 252 - 302
Target Start/End: Complemental strand, 708469 - 708419
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagattgatcga |
302 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||| ||||||||||||||||| |
|
|
| T |
708469 |
acaacccattattagagaaagctagtcccacccctaccttagattgatcga |
708419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 252 - 302
Target Start/End: Complemental strand, 15575689 - 15575639
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagattgatcga |
302 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||| ||||||||||||||||| |
|
|
| T |
15575689 |
acaacccattattagagaaagctagtcccacccctaccttagattgatcga |
15575639 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 252 - 302
Target Start/End: Complemental strand, 18874705 - 18874655
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagattgatcga |
302 |
Q |
| |
|
|||||||||||||||| |||||||||| |||||||||||||||||||||| |
|
|
| T |
18874705 |
acaacccattattagagaaagctagtctcacccttaccttagattgatcga |
18874655 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 252 - 302
Target Start/End: Complemental strand, 20252222 - 20252172
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagattgatcga |
302 |
Q |
| |
|
||||| |||||||||| ||||||||||| |||||||||||||||||||||| |
|
|
| T |
20252222 |
acaactcattattagagaaagctagtcctacccttaccttagattgatcga |
20252172 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 253 - 299
Target Start/End: Original strand, 47095465 - 47095511
Alignment:
| Q |
253 |
caacccattattagaaaaagctagtccgacccttaccttagattgat |
299 |
Q |
| |
|
||||||||||||||| ||||||||||| ||||||||||||||||||| |
|
|
| T |
47095465 |
caacccattattagagaaagctagtcccacccttaccttagattgat |
47095511 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 58453 - 58409
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagatt |
296 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
58453 |
acaacccattattagagaaagctagtcccacccttaccttagatt |
58409 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 262 - 322
Target Start/End: Original strand, 16078352 - 16078412
Alignment:
| Q |
262 |
attagaaaaagctagtccgacccttaccttagattgatcgattgaaaggttctcttctctg |
322 |
Q |
| |
|
|||||| |||| |||||| |||||||||||| |||| ||||||||||||||||||||||| |
|
|
| T |
16078352 |
attagagaaagttagtcccacccttaccttatcttgaccgattgaaaggttctcttctctg |
16078412 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 38299760 - 38299804
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagatt |
296 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
38299760 |
acaacccattattagagaaagctagtcccacccttaccttagatt |
38299804 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 302
Target Start/End: Original strand, 3287756 - 3287806
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagattgatcga |
302 |
Q |
| |
|
|||||| ||||||||| |||||||||| |||||||||||||||||||||| |
|
|
| T |
3287756 |
acaacctattattagagaaagctagtctcacccttaccttagattgatcga |
3287806 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 296
Target Start/End: Complemental strand, 13744548 - 13744506
Alignment:
| Q |
254 |
aacccattattagaaaaagctagtccgacccttaccttagatt |
296 |
Q |
| |
|
|||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
13744548 |
aacccattattagagaaagctagtcccacccttaccttagatt |
13744506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 297
Target Start/End: Original strand, 18570659 - 18570704
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagattg |
297 |
Q |
| |
|
|||||||||||||||| |||||||||| ||||||||||||||||| |
|
|
| T |
18570659 |
acaacccattattagagaaagctagtctcacccttaccttagattg |
18570704 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 297
Target Start/End: Complemental strand, 33556145 - 33556100
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagattg |
297 |
Q |
| |
|
|||||||||||||||| ||||||||||| ||||||| ||||||||| |
|
|
| T |
33556145 |
acaacccattattagagaaagctagtcccacccttatcttagattg |
33556100 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 19195623 - 19195667
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagatt |
296 |
Q |
| |
|
||||| |||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
19195623 |
acaactcattattagagaaagctagtcccacccttaccttagatt |
19195667 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 292
Target Start/End: Original strand, 25943279 - 25943319
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttacctta |
292 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||||||| |
|
|
| T |
25943279 |
acaacccattattagagaaagctagtcccacccttacctta |
25943319 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 252 - 303
Target Start/End: Complemental strand, 8488134 - 8488083
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagattgatcgat |
303 |
Q |
| |
|
|||||||||||||||| |||| |||||| ||||||||||||| || |||||| |
|
|
| T |
8488134 |
acaacccattattagagaaagttagtcccacccttaccttaggttaatcgat |
8488083 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 252 - 303
Target Start/End: Complemental strand, 8513793 - 8513742
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagattgatcgat |
303 |
Q |
| |
|
|||||||||||||||| |||| |||||| ||||||||||||| || |||||| |
|
|
| T |
8513793 |
acaacccattattagagaaagttagtcccacccttaccttaggttaatcgat |
8513742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 252 - 299
Target Start/End: Complemental strand, 36300681 - 36300634
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagattgat |
299 |
Q |
| |
|
|||||||||||||||| |||||||||| ||| ||||||||||||||| |
|
|
| T |
36300681 |
acaacccattattagagaaagctagtctcacctttaccttagattgat |
36300634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 314
Target Start/End: Original strand, 15720791 - 15720853
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagattgatcgattgaaaggttct |
314 |
Q |
| |
|
|||||||||||| ||| ||||||||||| ||| |||||||| |||||| ||| ||| |||||| |
|
|
| T |
15720791 |
acaacccattatgagagaaagctagtcccacctttaccttaaattgattgatcgaatggttct |
15720853 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 16541707 - 16541658
Alignment:
| Q |
79 |
tcaccctctttattttttcttcccgcacctgacaaaacatcaaacctatt |
128 |
Q |
| |
|
|||||||| ||||||||||||||||| || ||||| ||||||||| |||| |
|
|
| T |
16541707 |
tcaccctccttattttttcttcccgctccggacaacacatcaaacatatt |
16541658 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 16623955 - 16624004
Alignment:
| Q |
79 |
tcaccctctttattttttcttcccgcacctgacaaaacatcaaacctatt |
128 |
Q |
| |
|
|||||||| ||||||||||||||||| || ||||| ||||||||| |||| |
|
|
| T |
16623955 |
tcaccctccttattttttcttcccgctccggacaacacatcaaacatatt |
16624004 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 293
Target Start/End: Original strand, 43745668 - 43745709
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttag |
293 |
Q |
| |
|
||||| |||||||||| ||||||||||| ||||||||||||| |
|
|
| T |
43745668 |
acaactcattattagagaaagctagtcccacccttaccttag |
43745709 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 8930805 - 8930761
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagatt |
296 |
Q |
| |
|
|||||||||||||||| ||| |||||| |||||||||||||||| |
|
|
| T |
8930805 |
acaacccattattagagaaatgtagtcccacccttaccttagatt |
8930761 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 13315122 - 13315078
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagatt |
296 |
Q |
| |
|
|||||||||||||||| |||| ||||| |||||||||||||||| |
|
|
| T |
13315122 |
acaacccattattagagaaagatagtctcacccttaccttagatt |
13315078 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 20586374 - 20586414
Alignment:
| Q |
262 |
attagaaaaagctagtccgacccttaccttagattgatcga |
302 |
Q |
| |
|
|||||| |||| |||||| |||||||||||||||||||||| |
|
|
| T |
20586374 |
attagagaaagttagtcccacccttaccttagattgatcga |
20586414 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 43276784 - 43276744
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttacctta |
292 |
Q |
| |
|
|||||||||||||||| |||| |||||| |||||||||||| |
|
|
| T |
43276784 |
acaacccattattagagaaagttagtcccacccttacctta |
43276744 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0207 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0207
Description:
Target: scaffold0207; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 262 - 322
Target Start/End: Complemental strand, 13422 - 13362
Alignment:
| Q |
262 |
attagaaaaagctagtccgacccttaccttagattgatcgattgaaaggttctcttctctg |
322 |
Q |
| |
|
|||||| |||| |||||| |||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
13422 |
attagagaaagttagtcccacccttaccttagattgatcgattgaaaggttctattctctg |
13362 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 45; Significance: 1e-16; HSPs: 11)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 262 - 322
Target Start/End: Original strand, 3539859 - 3539919
Alignment:
| Q |
262 |
attagaaaaagctagtccgacccttaccttagattgatcgattgaaaggttctcttctctg |
322 |
Q |
| |
|
|||||| |||| |||||| |||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
3539859 |
attagagaaagttagtcccacccttaccttagattcatcgattgaaaggttctcttctctg |
3539919 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 252 - 302
Target Start/End: Complemental strand, 21315516 - 21315466
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagattgatcga |
302 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||||||||||||||||| |
|
|
| T |
21315516 |
acaacccattattagagaaagctagtcccacccttaccttagattgatcga |
21315466 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 252 - 302
Target Start/End: Complemental strand, 21335306 - 21335256
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagattgatcga |
302 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||||||||||||||||| |
|
|
| T |
21335306 |
acaacccattattagagaaagctagtcccacccttaccttagattgatcga |
21335256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 23801508 - 23801552
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagatt |
296 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
23801508 |
acaacccattattagagaaagctagtcccacccttaccttagatt |
23801552 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 293
Target Start/End: Original strand, 23610638 - 23610679
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttag |
293 |
Q |
| |
|
|||||||||||||||| ||||||||||| ||||||||||||| |
|
|
| T |
23610638 |
acaacccattattagagaaagctagtcccacccttaccttag |
23610679 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 225
Target Start/End: Complemental strand, 24734151 - 24733970
Alignment:
| Q |
44 |
ctcccaccaaccctcgacctcacttctcttccccgtcaccctctttattttttcttcccgcacctgacaaaacatcaaacctattttaaatatcctcttg |
143 |
Q |
| |
|
|||||| | ||||||||||| ||||| || ||| |||| |||| || ||||||||||||| |||||||| || |||||| |||| | ||||| ||| |
|
|
| T |
24734151 |
ctcccaaccaccctcgaccttacttccctaacccatcactctctctaatttttcttcccgctcctgacaacacttcaaacatattatgcttatccccttt |
24734052 |
T |
|
| Q |
144 |
aaagtttacccccaacatctttcccacacctttaacatcatccgacatagccttactacttccatgaagaaccaaccaattc |
225 |
Q |
| |
|
||| | ||||| |||||||| ||| ||||||||||| ||||| |||| ||| | ||||||||||||||||||||| |
|
|
| T |
24734051 |
aaaagacaaccccactgcctttcccatacccttaacatcatctgacatcaccttgctattaccatgaagaaccaaccaattc |
24733970 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 314
Target Start/End: Complemental strand, 28652570 - 28652530
Alignment:
| Q |
274 |
tagtccgacccttaccttagattgatcgattgaaaggttct |
314 |
Q |
| |
|
|||||| ||||||||||||||||||||||| |||||||||| |
|
|
| T |
28652570 |
tagtcccacccttaccttagattgatcgatcgaaaggttct |
28652530 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 149541 - 149497
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagatt |
296 |
Q |
| |
|
||||| |||||||||| ||||||||| | |||||||||||||||| |
|
|
| T |
149541 |
acaactcattattagagaaagctagttccacccttaccttagatt |
149497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 322
Target Start/End: Complemental strand, 18387761 - 18387713
Alignment:
| Q |
274 |
tagtccgacccttaccttagattgatcgattgaaaggttctcttctctg |
322 |
Q |
| |
|
|||||| |||||||| |||||||||||||| ||||| ||||| |||||| |
|
|
| T |
18387761 |
tagtcccacccttactttagattgatcgatcgaaagcttctcctctctg |
18387713 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 21369305 - 21369349
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagatt |
296 |
Q |
| |
|
|||||||||| ||||| |||||| |||| |||||||||||||||| |
|
|
| T |
21369305 |
acaacccattgttagagaaagcttgtcccacccttaccttagatt |
21369349 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 24516208 - 24516248
Alignment:
| Q |
262 |
attagaaaaagctagtccgacccttaccttagattgatcga |
302 |
Q |
| |
|
|||||| |||| |||||| |||||||||||||||||||||| |
|
|
| T |
24516208 |
attagagaaagttagtcccacccttaccttagattgatcga |
24516248 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0004 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0004
Description:
Target: scaffold0004; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 252 - 322
Target Start/End: Original strand, 111372 - 111442
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagattgatcgattgaaaggttctcttctctg |
322 |
Q |
| |
|
|||||||||||||||| |||||||| || |||||||||||||||| |||||| ||||| ||||| |||||| |
|
|
| T |
111372 |
acaacccattattagagaaagctagccccacccttaccttagattaatcgatcgaaagcttctcctctctg |
111442 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0004; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 75949 - 75993
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagatt |
296 |
Q |
| |
|
||||||||||||| || ||||||||||| |||||||||||||||| |
|
|
| T |
75949 |
acaacccattattggagaaagctagtcccacccttaccttagatt |
75993 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0411 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0411
Description:
Target: scaffold0411; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 274 - 319
Target Start/End: Complemental strand, 13435 - 13390
Alignment:
| Q |
274 |
tagtccgacccttaccttagattgatcgattgaaaggttctcttct |
319 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13435 |
tagtcccacccttaccttagattgatcgattgaaaggttctcttct |
13390 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 9)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 281 - 322
Target Start/End: Original strand, 23501713 - 23501754
Alignment:
| Q |
281 |
acccttaccttagattgatcgattgaaaggttctcttctctg |
322 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23501713 |
acccttaccttagattgatcgattgaaaggttctcttctctg |
23501754 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 10446229 - 10446273
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagatt |
296 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
10446229 |
acaacccattattagagaaagctagtcccacccttaccttagatt |
10446273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 293
Target Start/End: Complemental strand, 21683115 - 21683074
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttag |
293 |
Q |
| |
|
|||||||||||||||| ||||||||||| ||||||||||||| |
|
|
| T |
21683115 |
acaacccattattagagaaagctagtcccacccttaccttag |
21683074 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 296
Target Start/End: Complemental strand, 19825525 - 19825482
Alignment:
| Q |
253 |
caacccattattagaaaaagctagtccgacccttaccttagatt |
296 |
Q |
| |
|
||||||||||||||| |||||||||| |||||||||||||||| |
|
|
| T |
19825525 |
caacccattattagagaaagctagtctcacccttaccttagatt |
19825482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 314
Target Start/End: Original strand, 18982584 - 18982646
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagattgatcgattgaaaggttct |
314 |
Q |
| |
|
|||||||||||||||| |||| || ||| ||| ||||||||||||||| |||| |||||||| |
|
|
| T |
18982584 |
acaacccattattagataaagttaatcccaccgttaccttagattgattgattacaaggttct |
18982646 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 29045283 - 29045325
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttaga |
294 |
Q |
| |
|
|||||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
29045283 |
acaacccattattagagaaagctagtctcacccttaccttaga |
29045325 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 15890742 - 15890702
Alignment:
| Q |
262 |
attagaaaaagctagtccgacccttaccttagattgatcga |
302 |
Q |
| |
|
|||||| |||| |||||| |||||||||||||||||||||| |
|
|
| T |
15890742 |
attagagaaagttagtcccacccttaccttagattgatcga |
15890702 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 23658101 - 23658145
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagatt |
296 |
Q |
| |
|
|||||| |||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
23658101 |
acaacctattattagggaaagctagtcccacccttaccttagatt |
23658145 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 314
Target Start/End: Complemental strand, 25601340 - 25601308
Alignment:
| Q |
282 |
cccttaccttagattgatcgattgaaaggttct |
314 |
Q |
| |
|
|||||||||||||||||||||| |||||||||| |
|
|
| T |
25601340 |
cccttaccttagattgatcgatcgaaaggttct |
25601308 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0056 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0056
Description:
Target: scaffold0056; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 262 - 322
Target Start/End: Original strand, 67143 - 67203
Alignment:
| Q |
262 |
attagaaaaagctagtccgacccttaccttagattgatcgattgaaaggttctcttctctg |
322 |
Q |
| |
|
|||||| |||| |||||| ||| |||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
67143 |
attagagaaagttagtcccacctttaccttagattgatcaattgaaaggttctcttctctg |
67203 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0056; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 293
Target Start/End: Original strand, 18287 - 18328
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttag |
293 |
Q |
| |
|
|||||||||||||||| |||||||||| ||||||||||||| |
|
|
| T |
18287 |
acaacccattattagagaaagctagtcacacccttaccttag |
18328 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 16)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 262 - 322
Target Start/End: Original strand, 13302924 - 13302984
Alignment:
| Q |
262 |
attagaaaaagctagtccgacccttaccttagattgatcgattgaaaggttctcttctctg |
322 |
Q |
| |
|
|||||| |||| ||||| |||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
13302924 |
attagagaaagttagtctcacccttaccttagattgatcgattgaaaggttctattctctg |
13302984 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 252 - 302
Target Start/End: Original strand, 50544884 - 50544934
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagattgatcga |
302 |
Q |
| |
|
|||||||||||||||| |||||||||| |||||||||||||||||||||| |
|
|
| T |
50544884 |
acaacccattattagagaaagctagtctcacccttaccttagattgatcga |
50544934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 317
Target Start/End: Complemental strand, 21239079 - 21239024
Alignment:
| Q |
262 |
attagaaaaagctagtccgacccttaccttagattgatcgattgaaaggttctctt |
317 |
Q |
| |
|
|||||| |||| |||||| |||| ||||||||||||||||||||||||||| |||| |
|
|
| T |
21239079 |
attagagaaagttagtcccacccataccttagattgatcgattgaaaggttatctt |
21239024 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 297
Target Start/End: Original strand, 34392780 - 34392825
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagattg |
297 |
Q |
| |
|
|||||||||||||||| |||||||||| ||||||||||||||||| |
|
|
| T |
34392780 |
acaacccattattagagaaagctagtcacacccttaccttagattg |
34392825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 8306618 - 8306662
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagatt |
296 |
Q |
| |
|
|||||||||||||||| ||||||||||| || ||||||||||||| |
|
|
| T |
8306618 |
acaacccattattagagaaagctagtcccactcttaccttagatt |
8306662 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 35895111 - 35895155
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagatt |
296 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||| ||||||||||| |
|
|
| T |
35895111 |
acaacccattattagataaagctagtcctacccataccttagatt |
35895155 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 38056712 - 38056668
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagatt |
296 |
Q |
| |
|
||||||||||| |||| ||||||||||| |||||||||||||||| |
|
|
| T |
38056712 |
acaacccattactagagaaagctagtcccacccttaccttagatt |
38056668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 45499554 - 45499598
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagatt |
296 |
Q |
| |
|
|||||||||||||||| |||||||||| |||||||||||||||| |
|
|
| T |
45499554 |
acaacccattattagagaaagctagtctcacccttaccttagatt |
45499598 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 258 - 297
Target Start/End: Original strand, 7703140 - 7703179
Alignment:
| Q |
258 |
cattattagaaaaagctagtccgacccttaccttagattg |
297 |
Q |
| |
|
|||||||||| ||||||||||| ||||||||||||||||| |
|
|
| T |
7703140 |
cattattagagaaagctagtcccacccttaccttagattg |
7703179 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 17901834 - 17901792
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttaga |
294 |
Q |
| |
|
|||||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
17901834 |
acaacccattattagagaaagctagtctcacccttaccttaga |
17901792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 297
Target Start/End: Original strand, 20588650 - 20588695
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagattg |
297 |
Q |
| |
|
|||||||||||||||| ||||||| ||| |||||||||||| |||| |
|
|
| T |
20588650 |
acaacccattattagagaaagctaatcccacccttaccttaaattg |
20588695 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 297
Target Start/End: Original strand, 20593188 - 20593233
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagattg |
297 |
Q |
| |
|
|||||||||||||||| ||||||| ||| |||||||||||| |||| |
|
|
| T |
20593188 |
acaacccattattagagaaagctaatcccacccttaccttaaattg |
20593233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 7051952 - 7051912
Alignment:
| Q |
262 |
attagaaaaagctagtccgacccttaccttagattgatcga |
302 |
Q |
| |
|
|||||| |||| |||||| |||||||||||||||||||||| |
|
|
| T |
7051952 |
attagagaaagttagtcccacccttaccttagattgatcga |
7051912 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 22145706 - 22145666
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttacctta |
292 |
Q |
| |
|
|||||||||||||||| |||| |||||| |||||||||||| |
|
|
| T |
22145706 |
acaacccattattagagaaagttagtcccacccttacctta |
22145666 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 314
Target Start/End: Complemental strand, 24723381 - 24723329
Alignment:
| Q |
262 |
attagaaaaagctagtccgacccttaccttagattgatcgattgaaaggttct |
314 |
Q |
| |
|
|||||| |||| |||||| ||||||||||||||||||| ||| | |||||||| |
|
|
| T |
24723381 |
attagagaaagttagtcccacccttaccttagattgattgatcgcaaggttct |
24723329 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 28476774 - 28476730
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagatt |
296 |
Q |
| |
|
||||| |||||||||| ||| ||||||| |||||||||||||||| |
|
|
| T |
28476774 |
acaactcattattagagaaatctagtcccacccttaccttagatt |
28476730 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1186 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold1186
Description:
Target: scaffold1186; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 252 - 302
Target Start/End: Original strand, 2032 - 2082
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagattgatcga |
302 |
Q |
| |
|
|||||||||||||||| |||||||||| |||||||||||||||||||||| |
|
|
| T |
2032 |
acaacccattattagagaaagctagtctcacccttaccttagattgatcga |
2082 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0005 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0005
Description:
Target: scaffold0005; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 252 - 302
Target Start/End: Complemental strand, 186236 - 186186
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagattgatcga |
302 |
Q |
| |
|
|||||||||||||||| |||||||||| |||||||||||||||||||||| |
|
|
| T |
186236 |
acaacccattattagagaaagctagtctcacccttaccttagattgatcga |
186186 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0676 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0676
Description:
Target: scaffold0676; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 2893 - 2937
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagatt |
296 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
2893 |
acaacccattattagagaaagctagtcccacccttaccttagatt |
2937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0220 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0220
Description:
Target: scaffold0220; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 13961 - 14005
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagatt |
296 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
13961 |
acaacccattattagagaaagctagtcccacccttaccttagatt |
14005 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0026 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0026
Description:
Target: scaffold0026; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 274 - 322
Target Start/End: Original strand, 146757 - 146805
Alignment:
| Q |
274 |
tagtccgacccttaccttagattgatcgattgaaaggttctcttctctg |
322 |
Q |
| |
|
|||||| |||| ||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
146757 |
tagtcccacccataccttagattgatcgattgaaaggttcttttctctg |
146805 |
T |
|
Back To:
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Target: scaffold0594 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0594
Description:
Target: scaffold0594; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 302
Target Start/End: Original strand, 2259 - 2309
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagattgatcga |
302 |
Q |
| |
|
|||||||||||||| | ||||||||||| ||||||||||||||||| |||| |
|
|
| T |
2259 |
acaacccattattatagaaagctagtcccacccttaccttagattggtcga |
2309 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0108 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0108
Description:
Target: scaffold0108; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 314
Target Start/End: Original strand, 6430 - 6492
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagattgatcgattgaaaggttct |
314 |
Q |
| |
|
||||| |||||||||| |||||||||| ||||||||||||||||||| ||| | |||||||| |
|
|
| T |
6430 |
acaactcattattagagaaagctagtcttacccttaccttagattgattgatcgcaaggttct |
6492 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0149 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0149
Description:
Target: scaffold0149; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 21633 - 21674
Alignment:
| Q |
262 |
attagaaaaagctagtccgacccttaccttagattgatcgat |
303 |
Q |
| |
|
|||||| ||||||||||| ||||||||||||||||||||||| |
|
|
| T |
21633 |
attagagaaagctagtcccacccttaccttagattgatcgat |
21674 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0139 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0139
Description:
Target: scaffold0139; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 293
Target Start/End: Original strand, 23546 - 23587
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttag |
293 |
Q |
| |
|
|||||||||||||||| ||||||||||| ||||||||||||| |
|
|
| T |
23546 |
acaacccattattagagaaagctagtcctacccttaccttag |
23587 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0048 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0048
Description:
Target: scaffold0048; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 254 - 299
Target Start/End: Complemental strand, 68764 - 68719
Alignment:
| Q |
254 |
aacccattattagaaaaagctagtccgacccttaccttagattgat |
299 |
Q |
| |
|
|||||||||||||| |||| |||||| ||||||||||||||||||| |
|
|
| T |
68764 |
aacccattattagagaaaggtagtcccacccttaccttagattgat |
68719 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0878 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0878
Description:
Target: scaffold0878; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 3462 - 3418
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagatt |
296 |
Q |
| |
|
||||| |||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
3462 |
acaacgcattattagagaaagctagtcccacccttaccttagatt |
3418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0853 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0853
Description:
Target: scaffold0853; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 2494 - 2454
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttacctta |
292 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||||||| |
|
|
| T |
2494 |
acaacccattattagagaaagctagtcccacccttacctta |
2454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0431 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0431
Description:
Target: scaffold0431; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 292
Target Start/End: Original strand, 5645 - 5685
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttacctta |
292 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||||||| |
|
|
| T |
5645 |
acaacccattattagagaaagctagtcccacccttacctta |
5685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0328 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0328
Description:
Target: scaffold0328; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 18680 - 18636
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagatt |
296 |
Q |
| |
|
||||| |||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
18680 |
acaactcattattagagaaagctagtcccacccttaccttagatt |
18636 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0174 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0174
Description:
Target: scaffold0174; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 19868 - 19912
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagatt |
296 |
Q |
| |
|
|||||||||||||||| ||| ||||||| |||||||||||||||| |
|
|
| T |
19868 |
acaacccattattagagaaatctagtcctacccttaccttagatt |
19912 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0174; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 5466 - 5510
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagatt |
296 |
Q |
| |
|
||||| |||||||||| |||| |||||| |||||||||||||||| |
|
|
| T |
5466 |
acaactcattattagagaaaggtagtcccacccttaccttagatt |
5510 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0061 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0061
Description:
Target: scaffold0061; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 14626 - 14582
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagatt |
296 |
Q |
| |
|
|||||||||||||||| |||||||||| |||||||||||||||| |
|
|
| T |
14626 |
acaacccattattagagaaagctagtctcacccttaccttagatt |
14582 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0061; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 23684 - 23640
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagatt |
296 |
Q |
| |
|
|||||||||||||||| |||||||||| |||||||||||||||| |
|
|
| T |
23684 |
acaacccattattagagaaagctagtctcacccttaccttagatt |
23640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0031 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0031
Description:
Target: scaffold0031; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 127383 - 127339
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagatt |
296 |
Q |
| |
|
|||| ||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
127383 |
acaatccattattagagaaagctagtcccacccttaccttagatt |
127339 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0098 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0098
Description:
Target: scaffold0098; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 302
Target Start/End: Original strand, 40119 - 40169
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagattgatcga |
302 |
Q |
| |
|
|||||||||||||||| |||| ||||| | |||||||||||||||||||| |
|
|
| T |
40119 |
acaacccattattagagaaagttagtcgcatccttaccttagattgatcga |
40169 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0205 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0205
Description:
Target: scaffold0205; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 299
Target Start/End: Complemental strand, 5653 - 5609
Alignment:
| Q |
254 |
aacccattattagaaaaagctagtccgacccttaccttagattgat |
299 |
Q |
| |
|
|||||||||||||| || |||||||| ||||||||||||||||||| |
|
|
| T |
5653 |
aacccattattagagaa-gctagtcccacccttaccttagattgat |
5609 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0086 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0086
Description:
Target: scaffold0086; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 297
Target Start/End: Complemental strand, 35226 - 35181
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagattg |
297 |
Q |
| |
|
||||||||||||||| ||||||||| | ||||||||||||||||| |
|
|
| T |
35226 |
acaacccattattagggaaagctagtaccacccttaccttagattg |
35181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0037 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0037
Description:
Target: scaffold0037; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 315
Target Start/End: Complemental strand, 112996 - 112943
Alignment:
| Q |
262 |
attagaaaaagctagtccgacccttaccttagattgatcgattgaaaggttctc |
315 |
Q |
| |
|
|||||| |||| |||||| ||||||| ||||||||||||||| ||||| ||||| |
|
|
| T |
112996 |
attagagaaagttagtcccacccttatcttagattgatcgatcgaaagcttctc |
112943 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1941 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1941
Description:
Target: scaffold1941; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 160 - 200
Alignment:
| Q |
262 |
attagaaaaagctagtccgacccttaccttagattgatcga |
302 |
Q |
| |
|
|||||| |||| |||||| |||||||||||||||||||||| |
|
|
| T |
160 |
attagagaaagttagtcccacccttaccttagattgatcga |
200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0802 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0802
Description:
Target: scaffold0802; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 4739 - 4699
Alignment:
| Q |
262 |
attagaaaaagctagtccgacccttaccttagattgatcga |
302 |
Q |
| |
|
|||||| |||| |||||| |||||||||||||||||||||| |
|
|
| T |
4739 |
attagagaaagttagtcccacccttaccttagattgatcga |
4699 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0555 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0555
Description:
Target: scaffold0555; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 8786 - 8742
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagatt |
296 |
Q |
| |
|
|||||||||||||||| ||||||||| |||||||||||||||| |
|
|
| T |
8786 |
acaacccattattagagtaagctagtctcacccttaccttagatt |
8742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0414 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0414
Description:
Target: scaffold0414; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 11200 - 11160
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttacctta |
292 |
Q |
| |
|
|||||||||||||||| ||||||||||| | |||||||||| |
|
|
| T |
11200 |
acaacccattattagagaaagctagtcccatccttacctta |
11160 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0379 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0379
Description:
Target: scaffold0379; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 292
Target Start/End: Original strand, 10959 - 10999
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttacctta |
292 |
Q |
| |
|
|||||||||||||||| ||||||||| | |||||||||||| |
|
|
| T |
10959 |
acaacccattattagagaaagctagttccacccttacctta |
10999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0241 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0241
Description:
Target: scaffold0241; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 3204 - 3244
Alignment:
| Q |
262 |
attagaaaaagctagtccgacccttaccttagattgatcga |
302 |
Q |
| |
|
|||||| |||| |||||| |||||||||||||||||||||| |
|
|
| T |
3204 |
attagagaaagttagtccaacccttaccttagattgatcga |
3244 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0148 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0148
Description:
Target: scaffold0148; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 8856 - 8900
Alignment:
| Q |
252 |
acaacccattattagaaaaagctagtccgacccttaccttagatt |
296 |
Q |
| |
|
|||| ||||||||||| ||||||||||| ||||||| |||||||| |
|
|
| T |
8856 |
acaatccattattagataaagctagtcccacccttaacttagatt |
8900 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0028 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0028
Description:
Target: scaffold0028; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 314
Target Start/End: Complemental strand, 3070 - 3030
Alignment:
| Q |
274 |
tagtccgacccttaccttagattgatcgattgaaaggttct |
314 |
Q |
| |
|
|||||| ||||||||||| ||||||||||||| |||||||| |
|
|
| T |
3070 |
tagtcccacccttaccttggattgatcgattgcaaggttct |
3030 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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