View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0350_low_20 (Length: 250)

Name: NF0350_low_20
Description: NF0350
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0350_low_20
NF0350_low_20
[»] chr3 (12 HSPs)
chr3 (16-250)||(6150143-6150377)
chr3 (16-250)||(8271689-8271923)
chr3 (16-249)||(15943885-15944118)
chr3 (16-250)||(13964645-13964879)
chr3 (18-250)||(30149973-30150205)
chr3 (20-250)||(17201251-17201482)
chr3 (16-250)||(22150036-22150261)
chr3 (157-208)||(10408626-10408677)
chr3 (157-208)||(12509903-12509954)
chr3 (157-208)||(28756977-28757028)
chr3 (157-208)||(47126602-47126653)
chr3 (157-199)||(31692605-31692647)
[»] chr8 (10 HSPs)
chr8 (16-250)||(20649849-20650083)
chr8 (16-250)||(21847831-21848065)
chr8 (17-250)||(21194047-21194280)
chr8 (19-250)||(22437343-22437574)
chr8 (16-236)||(16415153-16415373)
chr8 (40-250)||(23903215-23903424)
chr8 (157-208)||(16268859-16268910)
chr8 (157-199)||(28984015-28984057)
chr8 (157-199)||(28989234-28989276)
chr8 (157-199)||(31414167-31414209)
[»] chr2 (5 HSPs)
chr2 (8-250)||(22739237-22739479)
chr2 (16-250)||(22280723-22280957)
chr2 (153-250)||(25131227-25131324)
chr2 (182-250)||(24567425-24567493)
chr2 (157-197)||(23113394-23113434)
[»] scaffold0021 (4 HSPs)
scaffold0021 (16-248)||(8175-8407)
scaffold0021 (16-250)||(90518-90752)
scaffold0021 (16-236)||(20930-21150)
scaffold0021 (16-236)||(30506-30726)
[»] scaffold0225 (1 HSPs)
scaffold0225 (16-250)||(26412-26646)
[»] scaffold0011 (4 HSPs)
scaffold0011 (16-250)||(182006-182240)
scaffold0011 (16-250)||(73651-73885)
scaffold0011 (16-250)||(78032-78266)
scaffold0011 (150-206)||(175701-175757)
[»] scaffold0008 (2 HSPs)
scaffold0008 (16-250)||(131543-131777)
scaffold0008 (16-208)||(26834-27026)
[»] chr4 (7 HSPs)
chr4 (16-250)||(14999633-14999867)
chr4 (16-250)||(15290209-15290443)
chr4 (9-250)||(12339909-12340152)
chr4 (157-208)||(3261986-3262037)
chr4 (157-208)||(7357296-7357347)
chr4 (157-208)||(11204424-11204475)
chr4 (157-208)||(29450729-29450780)
[»] scaffold0141 (1 HSPs)
scaffold0141 (16-250)||(23979-24213)
[»] chr6 (9 HSPs)
chr6 (16-250)||(16647165-16647399)
chr6 (17-250)||(16100866-16101099)
chr6 (18-250)||(16379571-16379803)
chr6 (16-192)||(14149316-14149492)
chr6 (153-250)||(18401496-18401593)
chr6 (8-105)||(21412714-21412811)
chr6 (189-250)||(14133932-14133993)
chr6 (158-197)||(18182705-18182744)
chr6 (133-199)||(21474502-21474568)
[»] chr1 (14 HSPs)
chr1 (16-250)||(20528055-20528289)
chr1 (20-250)||(20928056-20928286)
chr1 (18-250)||(20828517-20828749)
chr1 (9-162)||(22129555-22129708)
chr1 (52-250)||(41215019-41215217)
chr1 (156-250)||(22133015-22133109)
chr1 (115-197)||(20172217-20172300)
chr1 (157-208)||(20074973-20075024)
chr1 (157-208)||(20297456-20297507)
chr1 (157-208)||(31537261-31537312)
chr1 (157-208)||(38910090-38910141)
chr1 (157-208)||(48425948-48425999)
chr1 (157-208)||(52988816-52988867)
chr1 (161-197)||(16379149-16379185)
[»] scaffold0218 (1 HSPs)
scaffold0218 (16-250)||(1006-1240)
[»] scaffold0138 (1 HSPs)
scaffold0138 (17-250)||(25755-25989)
[»] chr7 (17 HSPs)
chr7 (17-250)||(4442903-4443136)
chr7 (18-250)||(7826876-7827108)
chr7 (18-250)||(27104836-27105068)
chr7 (18-250)||(27173257-27173489)
chr7 (25-250)||(13459009-13459234)
chr7 (88-199)||(14207346-14207456)
chr7 (88-199)||(14216036-14216146)
chr7 (58-250)||(22034973-22035165)
chr7 (58-186)||(17142404-17142532)
chr7 (140-213)||(17131685-17131758)
chr7 (157-208)||(21755431-21755482)
chr7 (157-208)||(26115769-26115820)
chr7 (157-208)||(13965847-13965898)
chr7 (157-208)||(26091977-26092028)
chr7 (157-208)||(40924996-40925047)
chr7 (157-208)||(49155320-49155371)
chr7 (9-82)||(14218206-14218279)
[»] scaffold0124 (1 HSPs)
scaffold0124 (16-250)||(4859-5093)
[»] scaffold0561 (1 HSPs)
scaffold0561 (19-250)||(6061-6292)
[»] scaffold0467 (2 HSPs)
scaffold0467 (19-250)||(678-909)
scaffold0467 (19-250)||(13388-13619)
[»] scaffold0120 (1 HSPs)
scaffold0120 (16-250)||(25194-25429)
[»] scaffold0266 (1 HSPs)
scaffold0266 (16-250)||(6914-7150)
[»] scaffold0302 (1 HSPs)
scaffold0302 (16-250)||(1227-1461)
[»] scaffold0170 (1 HSPs)
scaffold0170 (19-250)||(35101-35332)
[»] scaffold0465 (1 HSPs)
scaffold0465 (16-250)||(12679-12913)
[»] chr5 (6 HSPs)
chr5 (16-250)||(23508585-23508810)
chr5 (16-250)||(24584111-24584336)
chr5 (157-208)||(14884365-14884416)
chr5 (157-208)||(20345225-20345276)
chr5 (157-208)||(22505622-22505673)
chr5 (132-208)||(25851015-25851091)
[»] scaffold0962 (1 HSPs)
scaffold0962 (52-250)||(2589-2785)
[»] scaffold0673 (1 HSPs)
scaffold0673 (38-250)||(5380-5592)
[»] scaffold0162 (1 HSPs)
scaffold0162 (19-250)||(15926-16157)
[»] scaffold0462 (1 HSPs)
scaffold0462 (16-250)||(2713-2953)
[»] scaffold0610 (1 HSPs)
scaffold0610 (17-250)||(3958-4190)
[»] scaffold0112 (1 HSPs)
scaffold0112 (43-206)||(3559-3722)
[»] scaffold0615 (1 HSPs)
scaffold0615 (19-173)||(9429-9583)
[»] scaffold0009 (1 HSPs)
scaffold0009 (17-155)||(96637-96775)
[»] scaffold0058 (1 HSPs)
scaffold0058 (43-250)||(77446-77653)
[»] scaffold0233 (1 HSPs)
scaffold0233 (43-206)||(20807-20970)
[»] scaffold0293 (1 HSPs)
scaffold0293 (158-197)||(15479-15518)
[»] scaffold0088 (1 HSPs)
scaffold0088 (157-208)||(29992-30043)
[»] scaffold0068 (1 HSPs)
scaffold0068 (157-208)||(67303-67354)
[»] scaffold0041 (1 HSPs)
scaffold0041 (157-208)||(41793-41844)
[»] scaffold0010 (1 HSPs)
scaffold0010 (157-208)||(39528-39579)
[»] scaffold0001 (1 HSPs)
scaffold0001 (157-208)||(514548-514599)
[»] scaffold0585 (1 HSPs)
scaffold0585 (157-199)||(4284-4326)
[»] scaffold0077 (1 HSPs)
scaffold0077 (142-175)||(29941-29974)


Alignment Details
Target: chr3 (Bit Score: 167; Significance: 1e-89; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 16 - 250
Target Start/End: Original strand, 6150143 - 6150377
Alignment:
Q  16 attacttgctacaattgtggaaagaatggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaag 115  Q
    ||||||||||||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||| |    
T  6150143 attacttgctacaattgtggagagaagggtcatattagtactaagtgtaccaagccgaagaaggcggtgggaaaggtgtttgctttgaatgcggaggagg 6150242  T
Q  116 tggagcagccaaataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgctactctttcttttacatcgga 215  Q
    ||||||| ||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||     
T  6150243 tggagcaaccggataatcttatccgaggtatgtgttttatcaatagtactcatttgattgcaattattgatattggtgctactcattcttttatatcggt 6150342  T
Q  216 tagttttgttgagcatttgaagttggttgtaactc 250  Q
    ||||| |||||||| |||||| |||||||||||||    
T  6150343 tagttgtgttgagcgtttgaaattggttgtaactc 6150377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 16 - 250
Target Start/End: Original strand, 8271689 - 8271923
Alignment:
Q  16 attacttgctacaattgtggaaagaatggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaag 115  Q
    |||||||| |||||||||||| |||| |||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |    
T  8271689 attacttgttacaattgtggagagaagggtcatattagtaccaagtgtaccaagccgaagaaggcggcgggaaaggtgtttgctttgaatgcggaggagg 8271788  T
Q  116 tggagcagccaaataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgctactctttcttttacatcgga 215  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||  ||||     
T  8271789 tggagcagccggataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatactggtgctactcattcttttatctcggc 8271888  T
Q  216 tagttttgttgagcatttgaagttggttgtaactc 250  Q
    ||||| |||||| | |||| | |||||||||||||    
T  8271889 tagttgtgttgaacgtttggatttggttgtaactc 8271923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 16 - 249
Target Start/End: Original strand, 15943885 - 15944118
Alignment:
Q  16 attacttgctacaattgtggaaagaatggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaag 115  Q
    |||||||| |||||||| ||| |||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| |    
T  15943885 attacttgttacaattgcggagagaagggtcatattagtactaagtgtaccaagccgaagaaggcggcgggaaaggtgtttgctttaaatgcggaggagg 15943984  T
Q  116 tggagcagccaaataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgctactctttcttttacatcgga 215  Q
    ||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||     
T  15943985 tggagcagccggataatcttatacgaggtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgctactcattcttttatctcggt 15944084  T
Q  216 tagttttgttgagcatttgaagttggttgtaact 249  Q
    ||||| |||||| | |||||| ||||||||||||    
T  15944085 tagttgtgttgaacgtttgaatttggttgtaact 15944118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 16 - 250
Target Start/End: Original strand, 13964645 - 13964879
Alignment:
Q  16 attacttgctacaattgtggaaagaatggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaag 115  Q
    |||||||| |||||||||||| |||| |||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |    
T  13964645 attacttgttacaattgtggagagaagggtcatattagtaccaagtgtaccaagccgaagaaggcggcgggaaaggtgtttgctttgaatgcggaggagg 13964744  T
Q  116 tggagcagccaaataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgctactctttcttttacatcgga 215  Q
     |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||  ||||     
T  13964745 cggagcagccggataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatactggtgctactcattcttttatctcggc 13964844  T
Q  216 tagttttgttgagcatttgaagttggttgtaactc 250  Q
    ||||| ||||||   |||| | |||||||||||||    
T  13964845 tagttgtgttgaaagtttggatttggttgtaactc 13964879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 18 - 250
Target Start/End: Complemental strand, 30150205 - 30149973
Alignment:
Q  18 tacttgctacaattgtggaaagaatggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaagtg 117  Q
    |||||| |||||||||||| |||| |||||||||||||  |||||||||||||| ||||||||||| |||||||||||||||||||| || ||||| |||    
T  30150205 tacttgttacaattgtggagagaagggtcatattagtaccaagtgtaccaagccaaagaaggcggcgggaaaggtgtttgctttgaacgccgaggaggtg 30150106  T
Q  118 gagcagccaaataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgctactctttcttttacatcggata 217  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||  |||| ||    
T  30150105 gagcagccggataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatactggtgctactcattcttttatctcggcta 30150006  T
Q  218 gttttgttgagcatttgaagttggttgtaactc 250  Q
    ||| |||||| | |||| | |||||||||||||    
T  30150005 gttgtgttgaacgtttggatttggttgtaactc 30149973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 20 - 250
Target Start/End: Complemental strand, 17201482 - 17201251
Alignment:
Q  20 cttgctacaattgtggaaagaatggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaagtgga 119  Q
    |||| |||||||||||| |||| |||||||| |||| ||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||| ||||    
T  17201482 cttgttacaattgtggagagaagggtcatatcagtactaagtgtaccaagccgaagaaggcggcgggaaaggtgtttgcattgaatgcggaggaaatgga 17201383  T
Q  120 gcagccaaataatcttatccgaggtatgtg-ttttatcaatagtactcctttgattgcaattattgatattggtgctactctttcttttacatcggatag 218  Q
    ||| ||| ||||||||||| || ||||||| |||||||||||||||||| ||||||||||||||||||| | ||||||||| ||||||||  |||| |||    
T  17201382 gcatccagataatcttatctgatgtatgtgtttttatcaatagtactccattgattgcaattattgatactagtgctactcattcttttatctcggttag 17201283  T
Q  219 ttttgttgagcatttgaagttggttgtaactc 250  Q
    || |||||||| |||||| |||||||||||||    
T  17201282 ttgtgttgagcgtttgaaattggttgtaactc 17201251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 16 - 250
Target Start/End: Original strand, 22150036 - 22150261
Alignment:
Q  16 attacttgctacaattgtggaaagaatggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaag 115  Q
    ||||||||||||||||||||| |||| ||||| |||||||         ||||||||||||||||||| ||||| ||||||||||||||||| ||||| |    
T  22150036 attacttgctacaattgtggagagaagggtcacattagta---------ccaagccgaagaaggcggcgggaaaagtgtttgctttgaatgctgaggagg 22150126  T
Q  116 tggagcagccaaataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgctactctttcttttacatcgga 215  Q
    ||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||  | ||     
T  22150127 tggagcaaccagataatcttatctgaggtatgtgttttatcaatagtactcctttgattgcaattattgatactggtgctagtcattcttttatcttggt 22150226  T
Q  216 tagttttgttgagcatttgaagttggttgtaactc 250  Q
    ||| | |||||||| |||||| |||||||||||||    
T  22150227 tagctgtgttgagcgtttgaaattggttgtaactc 22150261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 208
Target Start/End: Complemental strand, 10408677 - 10408626
Alignment:
Q  157 aatagtactcctttgattgcaattattgatattggtgctactctttctttta 208  Q
    |||||||||||||| ||||| |||||||||| ||||||||||| || |||||    
T  10408677 aatagtactcctttaattgctattattgatactggtgctactcattgtttta 10408626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 12509903 - 12509954
Alignment:
Q  157 aatagtactcctttgattgcaattattgatattggtgctactctttctttta 208  Q
    |||||||||||||| ||||| |||||||||| ||||||||||| || |||||    
T  12509903 aatagtactcctttaattgctattattgatactggtgctactcattgtttta 12509954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 208
Target Start/End: Complemental strand, 28757028 - 28756977
Alignment:
Q  157 aatagtactcctttgattgcaattattgatattggtgctactctttctttta 208  Q
    |||||||||||||| ||||| |||||||||| ||||||||||| || |||||    
T  28757028 aatagtactcctttaattgctattattgatactggtgctactcattgtttta 28756977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 208
Target Start/End: Complemental strand, 47126653 - 47126602
Alignment:
Q  157 aatagtactcctttgattgcaattattgatattggtgctactctttctttta 208  Q
    |||||||||||||| ||||| |||||||||| ||||||||||| || |||||    
T  47126653 aatagtactcctttaattgctattattgatactggtgctactcattgtttta 47126602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 199
Target Start/End: Original strand, 31692605 - 31692647
Alignment:
Q  157 aatagtactcctttgattgcaattattgatattggtgctactc 199  Q
    |||||||||||||| ||||| ||||| ||||||||||||||||    
T  31692605 aatagtactcctttaattgctattatagatattggtgctactc 31692647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 163; Significance: 4e-87; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 16 - 250
Target Start/End: Original strand, 20649849 - 20650083
Alignment:
Q  16 attacttgctacaattgtggaaagaatggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaag 115  Q
    ||||||||||||||||||||  |||| ||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||| |    
T  20649849 attacttgctacaattgtggggagaagggtcatattagtactaagtgtaccaggccgaagaaggcggcgggaaaggtgtttgctttgaatgcggaggagg 20649948  T
Q  116 tggagcagccaaataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgctactctttcttttacatcgga 215  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||  ||||     
T  20649949 tggagcagccggataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatactggtgctactcattcttttatctcggt 20650048  T
Q  216 tagttttgttgagcatttgaagttggttgtaactc 250  Q
    ||||| |||||||| |||||| |||||||||||||    
T  20650049 tagttgtgttgagcgtttgaaattggttgtaactc 20650083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 16 - 250
Target Start/End: Original strand, 21847831 - 21848065
Alignment:
Q  16 attacttgctacaattgtggaaagaatggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaag 115  Q
    |||||||| |||||||||||| |||| |||||||||||||  |||||||||| ||||||||||||||| |||||||||||||||||||| || ||||| |    
T  21847831 attacttgttacaattgtggagagaagggtcatattagtaccaagtgtaccatgccgaagaaggcggcgggaaaggtgtttgctttgaacgcggaggagg 21847930  T
Q  116 tggagcagccaaataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgctactctttcttttacatcgga 215  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||  ||||     
T  21847931 tggagcagccggataatcttatccgaggtatgtgttttatcaatagtactcttttgattgcaattattgatactggtgctactcattcttttatctcggc 21848030  T
Q  216 tagttttgttgagcatttgaagttggttgtaactc 250  Q
    ||||| |||||| | |||| | |||||||||||||    
T  21848031 tagttgtgttgaacgtttggatttggttgtaactc 21848065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 17 - 250
Target Start/End: Original strand, 21194047 - 21194280
Alignment:
Q  17 ttacttgctacaattgtggaaagaatggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaagt 116  Q
    ||||||| |||||||||||| |||| || ||||| ||||  |||||||||||||||||||||||||| |||||||||||||| |||||||| ||||| ||    
T  21194047 ttacttgttacaattgtggagagaagggccatatcagtaccaagtgtaccaagccgaagaaggcggcgggaaaggtgtttgcattgaatgcggaggaggt 21194146  T
Q  117 ggagcagccaaataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgctactctttcttttacatcggat 216  Q
    |||||||||  ||||||||||||||||||||||||| |||||||| |||| |||||||| ||||||||||||||||||||||| ||||||||  |||| |    
T  21194147 ggagcagccggataatcttatccgaggtatgtgtttcatcaatagcactcatttgattggaattattgatattggtgctactcattcttttatctcggtt 21194246  T
Q  217 agttttgttgagcatttgaagttggttgtaactc 250  Q
    |||| |||| ||| |||||| |||||||||||||    
T  21194247 agttgtgttaagcgtttgaaattggttgtaactc 21194280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 19 - 250
Target Start/End: Complemental strand, 22437574 - 22437343
Alignment:
Q  19 acttgctacaattgtggaaagaatggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaagtgg 118  Q
    ||||| |||||||||||  |||| |||||||| |||| ||||||||||||||||||||||||||  | |||||||||||| |||||||  ||||||||||    
T  22437574 acttgttacaattgtggtgagaagggtcatatcagtactaagtgtaccaagccgaagaaggcggtggaaaaggtgtttgcattgaatgtggaggaagtgg 22437475  T
Q  119 agcagccaaataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgctactctttcttttacatcggatag 218  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || || ||||| ||||||||  |||| |||    
T  22437474 agcagccggataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcgattattgatactgatgttactcattcttttatctcggttag 22437375  T
Q  219 ttttgttgagcatttgaagttggttgtaactc 250  Q
    || |||||||| |||||| |||||||||||||    
T  22437374 ttgtgttgagcgtttgaaattggttgtaactc 22437343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 16 - 236
Target Start/End: Complemental strand, 16415373 - 16415153
Alignment:
Q  16 attacttgctacaattgtggaaagaatggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaag 115  Q
    |||||||||||||||| |||| |||| ||||||||||||| ||||||||||||||||||||||| ||  |||||||||||||| |||||||| ||||| |    
T  16415373 attacttgctacaattatggagagaaaggtcatattagtactaagtgtaccaagccgaagaaggtggtgggaaaggtgtttgccttgaatgcggaggagg 16415274  T
Q  116 tggagcagccaaataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgctactctttcttttacatcgga 215  Q
    ||||||| ||  |||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||| ||||||||  ||||     
T  16415273 tggagcaaccggataaccttatccgaggtatgtgttttatcaatagtattccattgattgcaattattgatactggtgctactcattcttttatctcggt 16415174  T
Q  216 tagttttgttgagcatttgaa 236  Q
    ||||| |||||| | ||||||    
T  16415173 tagttgtgttgaacgtttgaa 16415153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 40 - 250
Target Start/End: Complemental strand, 23903424 - 23903215
Alignment:
Q  40 aatggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaagtggagcagccaaataatcttatcc 139  Q
    ||||||||||| |||  ||||||||||||||| ||||||| ||| | |||||||||||| ||||||||||| || |||||||||||  ||||||||||      
T  23903424 aatggtcatatcagtgctaagtgtaccaagccaaagaaggtggcagaaaaggtgtttgcattgaatgcagaagaggtggagcagccggataatcttatat 23903325  T
Q  140 gaggtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgctactctttcttttacatcggatagttttgttgagcatttgaagtt 239  Q
    ||||||| |||||||||||||||||||| ||||||  ||||||||||| ||||||||||| ||||||||  |||| ||||| ||||||||||||||| ||    
T  23903324 gaggtatatgttttatcaatagtactcc-ttgattataattattgatactggtgctactcattcttttatctcggctagttgtgttgagcatttgaattt 23903226  T
Q  240 ggttgtaactc 250  Q
    |||||||||||    
T  23903225 ggttgtaactc 23903215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 16268859 - 16268910
Alignment:
Q  157 aatagtactcctttgattgcaattattgatattggtgctactctttctttta 208  Q
    |||||||||||||| ||||| |||||||||| ||||||||||| || |||||    
T  16268859 aatagtactcctttaattgctattattgatactggtgctactcattgtttta 16268910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 199
Target Start/End: Complemental strand, 28984057 - 28984015
Alignment:
Q  157 aatagtactcctttgattgcaattattgatattggtgctactc 199  Q
    |||||||||||||| ||||| |||||||||| |||||||||||    
T  28984057 aatagtactcctttaattgctattattgatactggtgctactc 28984015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 199
Target Start/End: Complemental strand, 28989276 - 28989234
Alignment:
Q  157 aatagtactcctttgattgcaattattgatattggtgctactc 199  Q
    |||||||||||||| ||||| |||||||||| |||||||||||    
T  28989276 aatagtactcctttaattgctattattgatactggtgctactc 28989234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 199
Target Start/End: Original strand, 31414167 - 31414209
Alignment:
Q  157 aatagtactcctttgattgcaattattgatattggtgctactc 199  Q
    |||||||||||||| ||||| ||||| ||||||||||||||||    
T  31414167 aatagtactcctttaattgctattatagatattggtgctactc 31414209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 159; Significance: 9e-85; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 8 - 250
Target Start/End: Original strand, 22739237 - 22739479
Alignment:
Q  8 cgaagaatattacttgctacaattgtggaaagaatggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgc 107  Q
    ||||| || |||||||||||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  22739237 cgaaggatgttacttgctacaattgtggagagaagggtcatattagtactaagtgtaccaagccgaagaaggcggcaggaaaggtgtttgctttgaatgc 22739336  T
Q  108 agaggaagtggagcagccaaataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgctactctttctttt 207  Q
     |||||||||||||||||  ||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  22739337 ggaggaagtggagcagccggataaatttatcagaggtatgtgttttatcaatagtactcctttgattgcaattattgatactggtgctactcattctttt 22739436  T
Q  208 acatcggatagttttgttgagcatttgaagttggttgtaactc 250  Q
    |  |||| ||||| ||||| || |||||| |||||||||||||    
T  22739437 atctcggttagttgtgttgtgcgtttgaaattggttgtaactc 22739479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 16 - 250
Target Start/End: Complemental strand, 22280957 - 22280723
Alignment:
Q  16 attacttgctacaattgtggaaagaatggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaag 115  Q
    |||||||| |||||||||||| ||||  |||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||| |    
T  22280957 attacttgttacaattgtggagagaaatgtcatattagtactaagtgtacaaagccgaagaaggcggcgggaaaggtgtttgctttgaatgcggaggagg 22280858  T
Q  116 tggagcagccaaataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgctactctttcttttacatcgga 215  Q
    |||||||||   ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||| ||||  ||||     
T  22280857 tggagcagcaggataatcttatcagaggtatgtgttttatcaatagtactcctttgattgcaattattgatactggtgctagtcattcatttatctcggt 22280758  T
Q  216 tagttttgttgagcatttgaagttggttgtaactc 250  Q
    ||||| |||||| | |||||| |||||||||||||    
T  22280757 tagttgtgttgaacgtttgaaattggttgtaactc 22280723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 153 - 250
Target Start/End: Complemental strand, 25131324 - 25131227
Alignment:
Q  153 tatcaatagtactcctttgattgcaattattgatattggtgctactctttcttttacatcggatagttttgttgagcatttgaagttggttgtaactc 250  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||| ||||| ||  |||| ||||| |||| | | | |||| |||||||||||||    
T  25131324 tatcaatagtactcatttgattgcaattattgatactggtgctactcattcttctatctcggttagttgtgtttaacgtctgaatttggttgtaactc 25131227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 250
Target Start/End: Original strand, 24567425 - 24567493
Alignment:
Q  182 ttgatattggtgctactctttcttttacatcggatagttttgttgagcatttgaagttggttgtaactc 250  Q
    |||||| | ||||||||| ||||||||  |||| ||||| |||||||| |||||| |||||||||||||    
T  24567425 ttgatactagtgctactcattcttttatctcggttagttgtgttgagcgtttgaaattggttgtaactc 24567493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 197
Target Start/End: Complemental strand, 23113434 - 23113394
Alignment:
Q  157 aatagtactcctttgattgcaattattgatattggtgctac 197  Q
    |||||||||||||| ||||| |||||||||| |||||||||    
T  23113434 aatagtactcctttaattgctattattgatactggtgctac 23113394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 157; Significance: 1e-83; HSPs: 4)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 16 - 248
Target Start/End: Complemental strand, 8407 - 8175
Alignment:
Q  16 attacttgctacaattgtggaaagaatggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaag 115  Q
    |||||||||||||||| |||| |||| ||||||||||||| |||||||||||| |||||||||||||| ||||||||||||||||||||||| || ||||    
T  8407 attacttgctacaattctggagagaagggtcatattagtactaagtgtaccaatccgaagaaggcggcgggaaaggtgtttgctttgaatgcggaagaag 8308  T
Q  116 tggagcagccaaataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgctactctttcttttacatcgga 215  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||  ||||     
T  8307 tggagcagccgaataatcttatctgaggtatgtgttttatcaatagtactcctttgattgcaattattgatactggtgctactcattcttttatctcggt 8208  T
Q  216 tagttttgttgagcatttgaagttggttgtaac 248  Q
    ||||| |||||||| ||||||  ||||||||||    
T  8207 tagttgtgttgagcgtttgaaaatggttgtaac 8175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 16 - 250
Target Start/End: Complemental strand, 90752 - 90518
Alignment:
Q  16 attacttgctacaattgtggaaagaatggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaag 115  Q
    |||||||| |||||||||||| |||| ||| ||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||| |    
T  90752 attacttgatacaattgtggagagaaaggttatattagtactaagtgtaccaagccgaagaaggcggcgggaaaggtgtatgctttgaatgcggaggagg 90653  T
Q  116 tggagcagccaaataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgctactctttcttttacatcgga 215  Q
    ||||||| ||  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||  ||||     
T  90652 tggagcaaccggataatcttatctgaggtatgtgttttatcaatagtactcctttgattgcaattattgatactggtgctactcattcttttatctcggt 90553  T
Q  216 tagttttgttgagcatttgaagttggttgtaactc 250  Q
    ||||| |||||||| |||||| |||||||||||||    
T  90552 tagttgtgttgagcgtttgaaattggttgtaactc 90518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 16 - 236
Target Start/End: Original strand, 20930 - 21150
Alignment:
Q  16 attacttgctacaattgtggaaagaatggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaag 115  Q
    |||||||| ||||||||| |  |||| || ||||| |||| ||||||||||||||| ||||||||||| ||||||||||||||||||| ||| |||||||    
T  20930 attacttgttacaattgttgtgagaaaggacatatcagtactaagtgtaccaagccaaagaaggcggcaggaaaggtgtttgctttgattgcggaggaag 21029  T
Q  116 tggagcagccaaataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgctactctttcttttacatcgga 215  Q
    ||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||  ||||     
T  21030 tggagcagccggataatcttatctgaggtatgtgttttatcaatagtactcctttgattgcaattattgatagtggtgctactcattcttttatctcggt 21129  T
Q  216 tagttttgttgagcatttgaa 236  Q
    ||||| |||||| | ||||||    
T  21130 tagttgtgttgaccgtttgaa 21150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 16 - 236
Target Start/End: Original strand, 30506 - 30726
Alignment:
Q  16 attacttgctacaattgtggaaagaatggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaag 115  Q
    |||||||| ||||||||| |  |||| || ||||| |||| ||||||||||||||| ||||||||||| ||||||||||||||||||| ||| |||||||    
T  30506 attacttgttacaattgttgtgagaaaggacatatcagtactaagtgtaccaagccaaagaaggcggcaggaaaggtgtttgctttgattgcggaggaag 30605  T
Q  116 tggagcagccaaataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgctactctttcttttacatcgga 215  Q
    ||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||  ||||     
T  30606 tggagcagccggataatcttatctgaggtatgtgttttatcaatagtactcctttgattgcaattattgatagtggtgctactcattcttttatctcggt 30705  T
Q  216 tagttttgttgagcatttgaa 236  Q
    ||||| |||||| | ||||||    
T  30706 tagttgtgttgaccgtttgaa 30726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 16 - 250
Target Start/End: Complemental strand, 26646 - 26412
Alignment:
Q  16 attacttgctacaattgtggaaagaatggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaag 115  Q
    |||||||||||||||||| || |||| |||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |    
T  26646 attacttgctacaattgtcgagagaagggtcatattagtaccaagtgtaccaagccgaagaaggcggcgggaaaggtgtttgctttgaatgcggaggagg 26547  T
Q  116 tggagcagccaaataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgctactctttcttttacatcgga 215  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||  ||||     
T  26546 tggagcagccggataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatactggtgctactcattcttttatctcggc 26447  T
Q  216 tagttttgttgagcatttgaagttggttgtaactc 250  Q
    ||||| |||||| | |||| | |||||||||||||    
T  26446 tagttgtgttgaacgtttggatttggttgtaactc 26412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 155; Significance: 2e-82; HSPs: 4)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 16 - 250
Target Start/End: Complemental strand, 182240 - 182006
Alignment:
Q  16 attacttgctacaattgtggaaagaatggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaag 115  Q
    ||||||||||||||||||||| |||| ||||| ||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||| ||||| |    
T  182240 attacttgctacaattgtggagagaagggtcagattagtactaagtgtaccaagccgaagaaggcggcgtgaaaggtgtttgctttgaatgcggaggagg 182141  T
Q  116 tggagcagccaaataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgctactctttcttttacatcgga 215  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||  ||||     
T  182140 tggagcagccggataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatactggtgctactcattcttttatctcggt 182041  T
Q  216 tagttttgttgagcatttgaagttggttgtaactc 250  Q
    ||||| |||||| | |||||| || ||||||||||    
T  182040 tagttgtgttgaacgtttgaaattcgttgtaactc 182006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 16 - 250
Target Start/End: Original strand, 73651 - 73885
Alignment:
Q  16 attacttgctacaattgtggaaagaatggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaag 115  Q
    ||||||||||||||||| ||| |||| ||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||  ||||| |    
T  73651 attacttgctacaattgcggagagaagggtcatattagtactaagtgtaccaagccgaagaaggcggtgggaaaggtgtttgctttgaatgtcgaggagg 73750  T
Q  116 tggagcagccaaataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgctactctttcttttacatcgga 215  Q
    ||||||| ||  ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || |||||  ||||     
T  73751 tggagcaaccggataatcttatatgaggtatgtgttttatcaatagtactcctttgattgcaattattgatactggtgctactcattgttttatctcggt 73850  T
Q  216 tagttttgttgagcatttgaagttggttgtaactc 250  Q
    ||||| |||||| | |||||| |||||||||||||    
T  73851 tagttgtgttgaacgtttgaaattggttgtaactc 73885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 16 - 250
Target Start/End: Original strand, 78032 - 78266
Alignment:
Q  16 attacttgctacaattgtggaaagaatggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaag 115  Q
    ||||||||||||||||| ||| |||| ||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||  ||||| |    
T  78032 attacttgctacaattgcggagagaagggtcatattagtactaagtgtaccaagccgaagaaggcggtgggaaaggtgtttgctttgaatgtcgaggagg 78131  T
Q  116 tggagcagccaaataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgctactctttcttttacatcgga 215  Q
    ||||||| ||  ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || |||||  ||||     
T  78132 tggagcaaccggataatcttatatgaggtatgtgttttatcaatagtactcctttgattgcaattattgatactggtgctactcattgttttatctcggt 78231  T
Q  216 tagttttgttgagcatttgaagttggttgtaactc 250  Q
    ||||| |||||| | |||||| |||||||||||||    
T  78232 tagttgtgttgaacgtttgaaattggttgtaactc 78266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 175701 - 175757
Alignment:
Q  150 ttttatcaatagtactcctttgattgcaattattgatattggtgctactctttcttt 206  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  175701 ttttatcaatagtactcctttgattgcaattattgatactggtgctactcattcttt 175757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 155; Significance: 2e-82; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 16 - 250
Target Start/End: Original strand, 131543 - 131777
Alignment:
Q  16 attacttgctacaattgtggaaagaatggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaag 115  Q
    ||||||||||||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |    
T  131543 attacttgctacaattgtggagagaagggtcatattagtactaagtgtaccaagccgaagaaggcggcgggaaaggtgtttgctttgaatgcggaggagg 131642  T
Q  116 tggagcagccaaataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgctactctttcttttacatcgga 215  Q
    ||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||| || |||||  ||||     
T  131643 tggagcagccggataatcttatccgaggtatgtgttttatcaatagaactcctttgattgcaattattgatacttgtgctactcattattttatctcggt 131742  T
Q  216 tagttttgttgagcatttgaagttggttgtaactc 250  Q
    ||||| |||||| | |||||| |||||||||||||    
T  131743 tagttgtgttgatcgtttgaaattggttgtaactc 131777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 16 - 208
Target Start/End: Complemental strand, 27026 - 26834
Alignment:
Q  16 attacttgctacaattgtggaaagaatggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaag 115  Q
    ||||||||||||||||||||| |||| ||||||||||||| ||||| ||||||||||||||||| ||| | ||||||||||||||||||||| |||||||    
T  27026 attacttgctacaattgtggagagaaaggtcatattagtactaagtttaccaagccgaagaagggggcggaaaaggtgtttgctttgaatgcggaggaag 26927  T
Q  116 tggagcagccaaataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgctactctttctttta 208  Q
    ||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||  ||||||||    
T  26926 tggagcaaccggataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatactgttgctacttattctttta 26834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 155; Significance: 2e-82; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 16 - 250
Target Start/End: Complemental strand, 14999867 - 14999633
Alignment:
Q  16 attacttgctacaattgtggaaagaatggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaag 115  Q
    |||||||| |||||||||||| |||| |||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |    
T  14999867 attacttgttacaattgtggagagaagggtcatattagtaccaagtgtaccaagccgaagaaggcggcgggaaaggtgtttgctttgaatgcggaggagg 14999768  T
Q  116 tggagcagccaaataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgctactctttcttttacatcgga 215  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||  ||||     
T  14999767 tggagcagccagataatcttatccgaggtatgcgttttatcaatagtactcctttgattgcaattattgatactggtgctactcattcttttatctcggc 14999668  T
Q  216 tagttttgttgagcatttgaagttggttgtaactc 250  Q
    ||||| |||||| | |||| | |||||||||||||    
T  14999667 tagttgtgttgaacgtttggatttggttgtaactc 14999633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 16 - 250
Target Start/End: Original strand, 15290209 - 15290443
Alignment:
Q  16 attacttgctacaattgtggaaagaatggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaag 115  Q
    |||||||||||||||| |||| |||| |||||||||||||  ||||||||| | ||||||||||||||  ||||||||||| ||||||| || |||||||    
T  15290209 attacttgctacaattatggagagaagggtcatattagtaccaagtgtacccaaccgaagaaggcggcgagaaaggtgttttctttgaacgcggaggaag 15290308  T
Q  116 tggagcagccaaataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgctactctttcttttacatcgga 215  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||  ||||     
T  15290309 tggagcagccggataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatagtggtgctactcattcttttatctcggc 15290408  T
Q  216 tagttttgttgagcatttgaagttggttgtaactc 250  Q
    ||||| |||||| | |||| | |||||||||||||    
T  15290409 tagttgtgttgaacgtttggatttggttgtaactc 15290443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 9 - 250
Target Start/End: Original strand, 12339909 - 12340152
Alignment:
Q  9 gaagaatattacttgctacaattgtggaaagaatggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgca 108  Q
    |||| |||||||||| ||||| || ||| ||   |||||||| |||| |||||||||||| |||||||||||| | || |||||||||| |||||||||     
T  12339909 gaaggatattacttgttacaactgcggagagtcaggtcatatcagtactaagtgtaccaaaccgaagaaggcgtcgggtaaggtgtttgatttgaatgcg 12340008  T
Q  109 gaggaagtggagcagccaaataatcttatccgaggtatgtgtttt--atcaatagtactcctttgattgcaattattgatattggtgctactctttcttt 206  Q
    || || || || || | | ||||||| ||||||||||||| ||||  ||||||||||||||||||||||| ||||||||||||||| |||||| ||||||    
T  12340009 gatgaggtcgaacaacaagataatctcatccgaggtatgtattttttatcaatagtactcctttgattgcgattattgatattggtcctactcattcttt 12340108  T
Q  207 tacatcggatagttttgttgagcatttgaagttggttgtaactc 250  Q
    ||  |||| ||||| |||||| | |||||| |||||||| ||||    
T  12340109 tatctcggttagttgtgttgaacgtttgaatttggttgtgactc 12340152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 3261986 - 3262037
Alignment:
Q  157 aatagtactcctttgattgcaattattgatattggtgctactctttctttta 208  Q
    |||||||||||||| ||||| |||||||||| ||||||||||| || |||||    
T  3261986 aatagtactcctttaattgctattattgatactggtgctactcattgtttta 3262037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 208
Target Start/End: Complemental strand, 7357347 - 7357296
Alignment:
Q  157 aatagtactcctttgattgcaattattgatattggtgctactctttctttta 208  Q
    |||||||||||||| ||||| |||||||||| ||||||||||| || |||||    
T  7357347 aatagtactcctttaattgctattattgatactggtgctactcattgtttta 7357296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 11204424 - 11204475
Alignment:
Q  157 aatagtactcctttgattgcaattattgatattggtgctactctttctttta 208  Q
    |||||||||||||| ||||| |||||||||| ||||||||||| || |||||    
T  11204424 aatagtactcctttaattgctattattgatactggtgctactcattgtttta 11204475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 29450729 - 29450780
Alignment:
Q  157 aatagtactcctttgattgcaattattgatattggtgctactctttctttta 208  Q
    |||||||||||||| ||||| |||||||||| ||||||||||| || |||||    
T  29450729 aatagtactcctttaattgctattattgatactggtgctactcattgtttta 29450780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 151; Significance: 5e-80; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 16 - 250
Target Start/End: Complemental strand, 24213 - 23979
Alignment:
Q  16 attacttgctacaattgtggaaagaatggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaag 115  Q
    |||||||| |||||||||||| |||| |||||||||||||  |||||||||||||| ||||||||||| |||||||||||||||||||| |||||||| |    
T  24213 attacttgttacaattgtggagagaagggtcatattagtaccaagtgtaccaagccaaagaaggcggcgggaaaggtgtttgctttgaacgcagaggagg 24114  T
Q  116 tggagcagccaaataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgctactctttcttttacatcgga 215  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||  ||||     
T  24113 tggagcagccggataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatactggtgctactcattcttttatctcggc 24014  T
Q  216 tagttttgttgagcatttgaagttggttgtaactc 250  Q
    ||||| |||||| | |||| | |||||||||||||    
T  24013 tagttgtgttgaacgtttggatttggttgtaactc 23979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 151; Significance: 5e-80; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 16 - 250
Target Start/End: Original strand, 16647165 - 16647399
Alignment:
Q  16 attacttgctacaattgtggaaagaatggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaag 115  Q
    |||||||| |||||||||||| |||| |||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |    
T  16647165 attacttgttacaattgtggagagaagggtcatattagtaccaagtgtaccaagccgaagaaggcggcgggaaaggtgtttgctttgaatgcggaggagg 16647264  T
Q  116 tggagcagccaaataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgctactctttcttttacatcgga 215  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||  ||||     
T  16647265 tggagcagccggataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatactggtgctactcattcttttatctcggc 16647364  T
Q  216 tagttttgttgagcatttgaagttggttgtaactc 250  Q
    ||||| |||| | | |||| | |||||||||||||    
T  16647365 tagttgtgttaaacgtttggatttggttgtaactc 16647399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 17 - 250
Target Start/End: Complemental strand, 16101099 - 16100866
Alignment:
Q  17 ttacttgctacaattgtggaaagaatggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaagt 116  Q
    |||||||||||||||||||| |||| ||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||| || || ||    
T  16101099 ttacttgctacaattgtggagagaagggtcatattagtactaagtgtaccaagccaaagaaggcggcgggaaaggtgtttgctttgaatgcggaagaggt 16101000  T
Q  117 ggagcagccaaataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgctactctttcttttacatcggat 216  Q
    |||||| ||  |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||  |||| |    
T  16100999 ggagcaaccggataatcttatccgaagtatttgttttatcaatagtactcctttgattgcaattattgatattggtgctactcatttttttatctcggtt 16100900  T
Q  217 agttttgttgagcatttgaagttggttgtaactc 250  Q
    |||| |||||||| |||||| |||||||||||||    
T  16100899 agttgtgttgagcgtttgaaattggttgtaactc 16100866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 18 - 250
Target Start/End: Original strand, 16379571 - 16379803
Alignment:
Q  18 tacttgctacaattgtggaaagaatggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaagtg 117  Q
    |||||| |||||||||||| |||| |||||||||||||  |||||||||||||| ||||||||||| |||||||||||||||||||| || ||||| |||    
T  16379571 tacttgttacaattgtggagagaagggtcatattagtaccaagtgtaccaagccaaagaaggcggcgggaaaggtgtttgctttgaacgccgaggaggtg 16379670  T
Q  118 gagcagccaaataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgctactctttcttttacatcggata 217  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||  |||| ||    
T  16379671 gagcagccggataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatactggtgctactcattcttttatctcggcta 16379770  T
Q  218 gttttgttgagcatttgaagttggttgtaactc 250  Q
    ||| |||||| | |||| | |||||||||||||    
T  16379771 gttgtgttgaacgtttggatttggttgtaactc 16379803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 16 - 192
Target Start/End: Complemental strand, 14149492 - 14149316
Alignment:
Q  16 attacttgctacaattgtggaaagaatggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaag 115  Q
    |||||||| |||||||||||  |||| |||||||| |||| ||| ||||||||||||||||||||||| || ||||||||||| |||||||| |||||||    
T  14149492 attacttgttacaattgtggtgagaagggtcatatcagtactaattgtaccaagccgaagaaggcggcagggaaggtgtttgcattgaatgcggaggaag 14149393  T
Q  116 tggagcagccaaataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatattggt 192  Q
    |||| || |   ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  14149392 tggaacaactggataatcttatccgaggtatgtgttttatcgatagtactcctttgattgcaattattgatactggt 14149316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 153 - 250
Target Start/End: Complemental strand, 18401593 - 18401496
Alignment:
Q  153 tatcaatagtactcctttgattgcaattattgatattggtgctactctttcttttacatcggatagttttgttgagcatttgaagttggttgtaactc 250  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||  | ||||||  |||| ||||| |||||| | |||||| ||||||| |||||    
T  18401593 tatcaatagtactcctttgattgcaattattgatattggtgttactgatacttttatctcggttagttgtgttgaacgtttgaaattggttggaactc 18401496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 105
Target Start/End: Original strand, 21412714 - 21412811
Alignment:
Q  8 cgaagaatattacttgctacaattgtggaaagaatggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaat 105  Q
    ||||| || ||||||| |||||||||||| |||| ||| ||||||||| |||||||| |||| ||||||||||||| ||||  |||||||||||||||    
T  21412714 cgaaggatgttacttgatacaattgtggagagaagggttatattagtactaagtgtatcaagtcgaagaaggcggcgggaacagtgtttgctttgaat 21412811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 250
Target Start/End: Complemental strand, 14133993 - 14133932
Alignment:
Q  189 tggtgctactctttcttttacatcggatagttttgttgagcatttgaagttggttgtaactc 250  Q
    ||||||||||| ||||||||  |||| ||||| |||||||| |||||| |||||||||||||    
T  14133993 tggtgctactcattcttttatctcggttagttgtgttgagcgtttgaaattggttgtaactc 14133932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 18182705 - 18182744
Alignment:
Q  158 atagtactcctttgattgcaattattgatattggtgctac 197  Q
    ||||||||||||| ||||| ||||||||||||||||||||    
T  18182705 atagtactcctttaattgctattattgatattggtgctac 18182744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 21474568 - 21474502
Alignment:
Q  133 cttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgctactc 199  Q
    |||||| ||||||| |||||  | |||||||||||||| ||||| ||||| |||| |||||||||||    
T  21474568 cttatcagaggtatttgtttctttaatagtactcctttaattgctattatagatactggtgctactc 21474502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 151; Significance: 5e-80; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 16 - 250
Target Start/End: Complemental strand, 20528289 - 20528055
Alignment:
Q  16 attacttgctacaattgtggaaagaatggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaag 115  Q
    |||||||| |||||||||||| |||| ||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||| ||||| |    
T  20528289 attacttgttacaattgtggagagaaaggtcatattagtactaagtgtaccaagccgaagaaggcagcgggaaaggtgtttgctttgaatgcggaggagg 20528190  T
Q  116 tggagcagccaaataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgctactctttcttttacatcgga 215  Q
    |||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||  ||||     
T  20528189 tggaacagccgcataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatcctggtgctactcattcttttatctcggt 20528090  T
Q  216 tagttttgttgagcatttgaagttggttgtaactc 250  Q
    ||||| |||||| | |||||| |||||||||||||    
T  20528089 tagttgtgttgaacgtttgaaattggttgtaactc 20528055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 20 - 250
Target Start/End: Complemental strand, 20928286 - 20928056
Alignment:
Q  20 cttgctacaattgtggaaagaatggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaagtgga 119  Q
    |||| |||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  20928286 cttgttacaattgtggagagaaaggtcatattagtactaagtgtaccaagccgaagaaggcggcaggaaaggtgtttgctttgaatgcagaggaggtgga 20928187  T
Q  120 gcagccaaataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgctactctttcttttacatcggatagt 219  Q
    ||||||  ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||  |||| ||||    
T  20928186 gcagccggataatcttatttgaggtatgtgttttatcaatagtactcctttgattgcaattattgatactggtgctactcattcttttatctcggttagt 20928087  T
Q  220 tttgttgagcatttgaagttggttgtaactc 250  Q
    | |||||| | |||||| |||||| ||||||    
T  20928086 tgtgttgatcgtttgaaattggttataactc 20928056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 18 - 250
Target Start/End: Original strand, 20828517 - 20828749
Alignment:
Q  18 tacttgctacaattgtggaaagaatggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaagtg 117  Q
    |||||| |||||||||||| |||| |||||||||||||  |||||||||||||| ||||||||||| |||||||||||||||||||| || ||||| |||    
T  20828517 tacttgttacaattgtggagagaagggtcatattagtaccaagtgtaccaagccaaagaaggcggcgggaaaggtgtttgctttgaacgccgaggaggtg 20828616  T
Q  118 gagcagccaaataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgctactctttcttttacatcggata 217  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||  |||| ||    
T  20828617 gagcagccggataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatactggtgctactcattcttttatctcggcta 20828716  T
Q  218 gttttgttgagcatttgaagttggttgtaactc 250  Q
    ||| |||||| | |||| | |||||||||||||    
T  20828717 gttgtgttgaacgtttggatttggttgtaactc 20828749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 9 - 162
Target Start/End: Original strand, 22129555 - 22129708
Alignment:
Q  9 gaagaatattacttgctacaattgtggaaagaatggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgca 108  Q
    |||| ||||||||||||||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22129555 gaaggatattacttgctacaattgtggagagaagggtcatattagtactaagtgtaccaagccgaagaaggcggcaggaaaggtgtttgctttgaatgca 22129654  T
Q  109 gaggaagtggagcagccaaataatcttatccgaggtatgtgttttatcaatagt 162  Q
    |||||||||||||||||| ||||||||| ||||||||| |||||||||||||||    
T  22129655 gaggaagtggagcagccagataatcttacccgaggtatttgttttatcaatagt 22129708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 52 - 250
Target Start/End: Original strand, 41215019 - 41215217
Alignment:
Q  52 agtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaagtggagcagccaaataatcttatccgaggtatgtgtt 151  Q
    ||||||| |||||||||||| ||||||||| | |||||||||||||| |||||||| |||||||||||||| ||  |||||||||||||| |||||||||    
T  41215019 agtaatatgtgtaccaagccaaagaaggcgacgggaaaggtgtttgcattgaatgccgaggaagtggagcaaccggataatcttatccgatgtatgtgtt 41215118  T
Q  152 ttatcaatagtactcctttgattgcaattattgatattggtgctactctttcttttacatcggatagttttgttgagcatttgaagttggttgtaactc 250  Q
    ||||||  |||||||||| ||||||||||||||||| ||||||||||| ||||||||  |||| ||||| |||||||| |||||| |||||||||||||    
T  41215119 ttatcagcagtactccttggattgcaattattgatactggtgctactcattcttttatctcggttagttgtgttgagcgtttgaatttggttgtaactc 41215217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 156 - 250
Target Start/End: Original strand, 22133015 - 22133109
Alignment:
Q  156 caatagtactcctttgattgcaattattgatattggtgctactctttcttttacatcggatagttttgttgagcatttgaagttggttgtaactc 250  Q
    |||||||| |||||||||||||||||||||||  |||||||||| ||||||||| |||| ||||| ||||||||||||||| |||||| ||||||    
T  22133015 caatagtaatcctttgattgcaattattgataccggtgctactcattcttttacctcggttagttgtgttgagcatttgaaattggttctaactc 22133109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 197
Target Start/End: Complemental strand, 20172300 - 20172217
Alignment:
Q  115 gtggagcagccaaataatcttatccgaggtatgtgtttt-atcaatagtactcctttgattgcaattattgatattggtgctac 197  Q
    |||||||||||  ||||||| ||  |||||||||||||| ||||||||||||| |||||||| |||| |||||| | |||||||    
T  20172300 gtggagcagccggataatctcatttgaggtatgtgtttttatcaatagtactcatttgattgaaattgttgatactagtgctac 20172217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 20074973 - 20075024
Alignment:
Q  157 aatagtactcctttgattgcaattattgatattggtgctactctttctttta 208  Q
    |||||||||||||| ||||| |||||||||| ||||||||||| || |||||    
T  20074973 aatagtactcctttaattgctattattgatactggtgctactcattgtttta 20075024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 208
Target Start/End: Complemental strand, 20297507 - 20297456
Alignment:
Q  157 aatagtactcctttgattgcaattattgatattggtgctactctttctttta 208  Q
    |||||||||||||| ||||| |||||||||| ||||||||||| || |||||    
T  20297507 aatagtactcctttaattgctattattgatactggtgctactcattgtttta 20297456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 31537261 - 31537312
Alignment:
Q  157 aatagtactcctttgattgcaattattgatattggtgctactctttctttta 208  Q
    |||||||||||||| ||||| |||||||||| ||||||||||| || |||||    
T  31537261 aatagtactcctttaattgctattattgatactggtgctactcattgtttta 31537312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 38910090 - 38910141
Alignment:
Q  157 aatagtactcctttgattgcaattattgatattggtgctactctttctttta 208  Q
    |||||||||||||| ||||| |||||||||| ||||||||||| || |||||    
T  38910090 aatagtactcctttaattgctattattgatactggtgctactcattgtttta 38910141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 208
Target Start/End: Complemental strand, 48425999 - 48425948
Alignment:
Q  157 aatagtactcctttgattgcaattattgatattggtgctactctttctttta 208  Q
    |||||||||||||| ||||| |||||||||| ||||||||||| || |||||    
T  48425999 aatagtactcctttaattgctattattgatactggtgctactcattgtttta 48425948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 208
Target Start/End: Complemental strand, 52988867 - 52988816
Alignment:
Q  157 aatagtactcctttgattgcaattattgatattggtgctactctttctttta 208  Q
    |||||||||||||| ||||| |||||||||| ||||||||||| || |||||    
T  52988867 aatagtactcctttaattgctattattgatactggtgctactcattgtttta 52988816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 197
Target Start/End: Complemental strand, 16379185 - 16379149
Alignment:
Q  161 gtactcctttgattgcaattattgatattggtgctac 197  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  16379185 gtactcctttaattgctattattgatattggtgctac 16379149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 16 - 250
Target Start/End: Original strand, 1006 - 1240
Alignment:
Q  16 attacttgctacaattgtggaaagaatggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaag 115  Q
    ||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||    
T  1006 attacttgctacaattgtggagagaagggtcacattagtactaagtgtaccaagccgaagaaggcggtgggaaaggtgtttgctttgaatgcggaggaag 1105  T
Q  116 tggagcagccaaataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgctactctttcttttacatcgga 215  Q
    |||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||  |||      
T  1106 tggagcagctggataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattatagatactggtgctactcattcttttatctcgat 1205  T
Q  216 tagttttgttgagcatttgaagttggttgtaactc 250  Q
    ||||| |||||| | |||||| ||||| |||||||    
T  1206 tagttgtgttgaacgtttgaaattggtcgtaactc 1240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 17 - 250
Target Start/End: Original strand, 25755 - 25989
Alignment:
Q  17 ttacttgctacaattgtggaaagaatggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaagt 116  Q
    ||||||| |||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||    
T  25755 ttacttgttacaattgtggagagaaaggtcatattagtactaagtgtaccaagccgaagaaggcggcgggaaaggtgtttgctttgaaagcagaagaagt 25854  T
Q  117 ggagcagccaaataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgctactc-tttcttttacatcgga 215  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||| |||||  ||||     
T  25855 ggagcagccggataatcttatccgaggtatgtgttttatcaatagtactcatttgattgcaattattgatattagtgctactcattttttttatctcggt 25954  T
Q  216 tagttttgttgagcatttgaagttggttgtaactc 250  Q
    |||||  ||||||| |||||| ||| |||||||||    
T  25955 tagttgcgttgagcgtttgaaattgattgtaactc 25989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 146; Significance: 5e-77; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 17 - 250
Target Start/End: Complemental strand, 4443136 - 4442903
Alignment:
Q  17 ttacttgctacaattgtggaaagaatggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaagt 116  Q
    ||||||| |||||||||||  |||| |||||||| |||  ||||||||||||||| ||||||||||| |||||||||||||||||| |||  ||||||||    
T  4443136 ttacttgttacaattgtggtgagaaaggtcatatcagttctaagtgtaccaagccaaagaaggcggcgggaaaggtgtttgctttgtatgtggaggaagt 4443037  T
Q  117 ggagcagccaaataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgctactctttcttttacatcggat 216  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||| |||| |    
T  4443036 ggagcagccggataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatactggtgctactcattcttctacctcggtt 4442937  T
Q  217 agttttgttgagcatttgaagttggttgtaactc 250  Q
    |||| |||||||| |||||| |||||||||||||    
T  4442936 agttgtgttgagcgtttgaatttggttgtaactc 4442903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 18 - 250
Target Start/End: Complemental strand, 7827108 - 7826876
Alignment:
Q  18 tacttgctacaattgtggaaagaatggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaagtg 117  Q
    |||||| |||||||||||| |||| |||||||||||||  |||||||||||||| ||||||||||| |||||||||||||||||||| || ||||| |||    
T  7827108 tacttgttacaattgtggagagaagggtcatattagtaccaagtgtaccaagccaaagaaggcggcgggaaaggtgtttgctttgaacgccgaggaggtg 7827009  T
Q  118 gagcagccaaataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgctactctttcttttacatcggata 217  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||  |||| ||    
T  7827008 gagcagccggataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatactggtgctactcattcttttatctcggcta 7826909  T
Q  218 gttttgttgagcatttgaagttggttgtaactc 250  Q
    ||| |||||| | |||| | |||||||||||||    
T  7826908 gttgtgttgaacgtttggatttggttgtaactc 7826876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 18 - 250
Target Start/End: Original strand, 27104836 - 27105068
Alignment:
Q  18 tacttgctacaattgtggaaagaatggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaagtg 117  Q
    |||||| |||||||||||| |||| |||||||||||||  |||||||||||||| ||||||||||| |||||||||||||||||||| || ||||| |||    
T  27104836 tacttgttacaattgtggagagaagggtcatattagtaccaagtgtaccaagccaaagaaggcggcgggaaaggtgtttgctttgaacgccgaggaggtg 27104935  T
Q  118 gagcagccaaataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgctactctttcttttacatcggata 217  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||  |||| ||    
T  27104936 gagcagccggataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatactggtgctactcattcttttatctcggcta 27105035  T
Q  218 gttttgttgagcatttgaagttggttgtaactc 250  Q
    ||| |||||| | |||| | |||||||||||||    
T  27105036 gttgtgttgaacgtttggatttggttgtaactc 27105068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 18 - 250
Target Start/End: Complemental strand, 27173489 - 27173257
Alignment:
Q  18 tacttgctacaattgtggaaagaatggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaagtg 117  Q
    |||||| |||||||||||| |||| |||||||||||||  |||||||||||||| ||||||||||| |||||||||||||||||||| || ||||| |||    
T  27173489 tacttgttacaattgtggagagaagggtcatattagtaccaagtgtaccaagccaaagaaggcggcgggaaaggtgtttgctttgaacgccgaggaggtg 27173390  T
Q  118 gagcagccaaataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgctactctttcttttacatcggata 217  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||  |||| ||    
T  27173389 gagcagccggataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatactggtgctactcattcttttatctcggcta 27173290  T
Q  218 gttttgttgagcatttgaagttggttgtaactc 250  Q
    ||| |||||| | ||||   |||||||||||||    
T  27173289 gttgtgttgaacgtttgggtttggttgtaactc 27173257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 25 - 250
Target Start/End: Complemental strand, 13459234 - 13459009
Alignment:
Q  25 tacaattgtggaaagaatggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaagtggagcagc 124  Q
    |||||||||||  |||| |||||||| |||| |||||||||||||  |||||||| | | ||||| |||||||| |||||||| |||||||||||||||     
T  13459234 tacaattgtggcgagaagggtcatatcagtactaagtgtaccaagttgaagaaggtgacgggaaaagtgtttgcattgaatgcggaggaagtggagcaga 13459135  T
Q  125 caaataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgctactctttcttttacatcggatagttttgt 224  Q
    |  |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||  |||| ||||| |||    
T  13459134 cggataatcttctccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatactggtgctactcattcttttatttcggttagttgtgt 13459035  T
Q  225 tgagcatttgaagttggttgtaactc 250  Q
    |||||||||||| || ||||||||||    
T  13459034 tgagcatttgaatttagttgtaactc 13459009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 88 - 199
Target Start/End: Complemental strand, 14207456 - 14207346
Alignment:
Q  88 aaggtgtttgctttgaatgcagaggaagtggagcagccaaataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgata 187  Q
    |||||||| ||||||||||| ||| |||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||| |||||||||||| |||    
T  14207456 aaggtgttcgctttgaatgcggagtaagtggagcagccatataatcttatt-gaggtatgtgttttatcaatagtactcctttaattgcaattattaata 14207358  T
Q  188 ttggtgctactc 199  Q
     ||| |||||||    
T  14207357 ctggcgctactc 14207346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 88 - 199
Target Start/End: Complemental strand, 14216146 - 14216036
Alignment:
Q  88 aaggtgtttgctttgaatgcagaggaagtggagcagccaaataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgata 187  Q
    |||||||| ||||||||||| ||| |||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||| |||||||||||| |||    
T  14216146 aaggtgttcgctttgaatgcggagtaagtggagcagccatataatcttatt-gaggtatgtgttttatcaatagtactcctttaattgcaattattaata 14216048  T
Q  188 ttggtgctactc 199  Q
     ||| |||||||    
T  14216047 ctggcgctactc 14216036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 58 - 250
Target Start/End: Complemental strand, 22035165 - 22034973
Alignment:
Q  58 aagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaagtggagcagccaaataatcttatccgaggtatgtgttttatca 157  Q
    |||||||||||||||||||||||    ||||  || ||||| |||||||  ||||| |||||||||||  ||||| | ||  ||||||||||||||||||    
T  22035165 aagtgtaccaagccgaagaaggccatgggaagagtttttgcattgaatgttgaggacgtggagcagccggataatttaatatgaggtatgtgttttatca 22035066  T
Q  158 atagtactcctttgattgcaattattgatattggtgctactctttcttttacatcggatagttttgttgagcatttgaagttggttgtaactc 250  Q
    ||||||||| ||||||||||| | |||||| | ||||||| | |||||| |  |||  ||||| |||||| | |||||| |||||| ||||||    
T  22035065 atagtactcatttgattgcaaatgttgatacttgtgctacgcattctttcatctcgcttagttgtgttgaacctttgaatttggttttaactc 22034973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 58 - 186
Target Start/End: Original strand, 17142404 - 17142532
Alignment:
Q  58 aagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaagtggagcagccaaataatcttatccgaggtatgtgttttatca 157  Q
    ||||||||||| |||||||||||||  |||||||| ||||| ||||||||||| || ||| ||||| | |||||| | ||  |||| |||||||||||||    
T  17142404 aagtgtaccaaaccgaagaaggcgggaggaaaggtctttgcattgaatgcagaagaggtgaagcagacgaataatttaatttgagggatgtgttttatca 17142503  T
Q  158 atagtactcctttgattgcaattattgat 186  Q
      |||| ||  ||||||||||||||||||    
T  17142504 tcagtattcaattgattgcaattattgat 17142532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 213
Target Start/End: Complemental strand, 17131758 - 17131685
Alignment:
Q  140 gaggtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgctactctttcttttacatcg 213  Q
    ||||||||||||||| ||| |||||||| ||||||| |||||||||||  |||||||| | |||||||| ||||    
T  17131758 gaggtatgtgttttaacaacagtactccattgattgtaattattgatacgggtgctacccattcttttatatcg 17131685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 208
Target Start/End: Complemental strand, 21755482 - 21755431
Alignment:
Q  157 aatagtactcctttgattgcaattattgatattggtgctactctttctttta 208  Q
    |||||||||||||| ||||| |||||||||||||||||||||| || |||||    
T  21755482 aatagtactcctttaattgctattattgatattggtgctactcattgtttta 21755431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 26115769 - 26115820
Alignment:
Q  157 aatagtactcctttgattgcaattattgatattggtgctactctttctttta 208  Q
    |||||||||||||| ||||| |||||||||||||||||||||| || |||||    
T  26115769 aatagtactcctttaattgctattattgatattggtgctactcattgtttta 26115820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 13965847 - 13965898
Alignment:
Q  157 aatagtactcctttgattgcaattattgatattggtgctactctttctttta 208  Q
    |||||||||||||| ||||| |||||||||| ||||||||||| || |||||    
T  13965847 aatagtactcctttaattgctattattgatactggtgctactcattgtttta 13965898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 26091977 - 26092028
Alignment:
Q  157 aatagtactcctttgattgcaattattgatattggtgctactctttctttta 208  Q
    |||||||||||||| ||||| |||||||||| ||||||||||| || |||||    
T  26091977 aatagtactcctttaattgctattattgatactggtgctactcattgtttta 26092028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 40924996 - 40925047
Alignment:
Q  157 aatagtactcctttgattgcaattattgatattggtgctactctttctttta 208  Q
    |||||||||||||| ||||| |||||||||| ||||||||||| || |||||    
T  40924996 aatagtactcctttaattgctattattgatactggtgctactcattgtttta 40925047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 208
Target Start/End: Complemental strand, 49155371 - 49155320
Alignment:
Q  157 aatagtactcctttgattgcaattattgatattggtgctactctttctttta 208  Q
    |||||||||||||| ||||| |||||||||| ||||||||||| || |||||    
T  49155371 aatagtactcctttaattgctattattgatactggtgctactcattgtttta 49155320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 82
Target Start/End: Complemental strand, 14218279 - 14218206
Alignment:
Q  9 gaagaatattacttgctacaattgtggaaagaatggtcatattagtaataagtgtaccaagccgaagaaggcgg 82  Q
    |||| |||||||||| | ||| |||||| ||   || ||||| |||| ||||||||||||||||||||||||||    
T  14218279 gaaggatattacttgtttcaactgtggagaggcaggccatatcagtactaagtgtaccaagccgaagaaggcgg 14218206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 16 - 250
Target Start/End: Original strand, 4859 - 5093
Alignment:
Q  16 attacttgctacaattgtggaaagaatggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaag 115  Q
    |||||||| |||||||||||| |||| |||||||||||||  |||||||||||||| ||||||||||| |||||||||||||||||||| |||||||| |    
T  4859 attacttgttacaattgtggagagaagggtcatattagtaccaagtgtaccaagccaaagaaggcggcgggaaaggtgtttgctttgaacgcagaggagg 4958  T
Q  116 tggagcagccaaataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgctactctttcttttacatcgga 215  Q
    ||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||| ||||||||  ||||     
T  4959 tggagcagccggataatcttatccgaggtatgtgttttatcaataatactcctttgattgcaattatcgatactggtgctactcattcttttatctcggc 5058  T
Q  216 tagttttgttgagcatttgaagttggttgtaactc 250  Q
    ||||| |||||| | |||| | |||||||||||||    
T  5059 tagttgtgttgaacgtttggatttggttgtaactc 5093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 19 - 250
Target Start/End: Original strand, 6061 - 6292
Alignment:
Q  19 acttgctacaattgtggaaagaatggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaagtgg 118  Q
    ||||| ||||||||||| ||||| |||||||| |||| ||||||||||||||| ||||||||||| |||||||||||||| |||||||| ||||||||||    
T  6061 acttgttacaattgtggtaagaagggtcatatcagtactaagtgtaccaagccaaagaaggcggcgggaaaggtgtttgcattgaatgcggaggaagtgg 6160  T
Q  119 agcagccaaataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgctactctttcttttacatcggatag 218  Q
    |||||||  ||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||| ||||||||  |||| |||    
T  6161 agcagccggataatcttatctgaggtatgtgttttatcaatagtactactttgattgcaataattgatactggtgctactcattcttttatctcggttag 6260  T
Q  219 ttttgttgagcatttgaagttggttgtaactc 250  Q
    || |||||||| |||||| |||||||| ||||    
T  6261 ttgtgttgagcgtttgaatttggttgtgactc 6292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 140; Significance: 2e-73; HSPs: 2)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 19 - 250
Target Start/End: Original strand, 678 - 909
Alignment:
Q  19 acttgctacaattgtggaaagaatggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaagtgg 118  Q
    ||||| || ||||||||| |||| |||||||||||||  ||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||| ||||    
T  678 acttgttataattgtggagagaaaggtcatattagtaccaagtgtaccaaaccgaagaaggcggcgggaaaggtgtttgctttgaatgcggaggaggtgg 777  T
Q  119 agcagccaaataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgctactctttcttttacatcggatag 218  Q
    |||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||  |||| |||    
T  778 agcagccggataatcttatctgaggtatgtgttttatcaatagtactcctttgattgcaattattgatactggtgctactcattcttttatctcggttag 877  T
Q  219 ttttgttgagcatttgaagttggttgtaactc 250  Q
    || | |||| | |||||| |||||||||||||    
T  878 ttgtattgaacgtttgaaattggttgtaactc 909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 19 - 250
Target Start/End: Original strand, 13388 - 13619
Alignment:
Q  19 acttgctacaattgtggaaagaatggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaagtgg 118  Q
    ||||| || ||||||||| |||| |||||||||||||  ||||||||||| |||||||||||||| ||||||||||||||||||||||| || || ||||    
T  13388 acttgttataattgtggagagaaaggtcatattagtaccaagtgtaccaaaccgaagaaggcggcgggaaaggtgtttgctttgaatgcggaagaggtgg 13487  T
Q  119 agcagccaaataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgctactctttcttttacatcggatag 218  Q
    |||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||  |||| |||    
T  13488 agcagccggataatcttatcagaggtatgtgttttatcaatagtactcctttgattgcaattattgatactggtgctactcattcttttatctcggttag 13587  T
Q  219 ttttgttgagcatttgaagttggttgtaactc 250  Q
    || |||||| | |||||| |||||||||||||    
T  13588 ttgtgttgaacgtttgaaattggttgtaactc 13619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 16 - 250
Target Start/End: Complemental strand, 25429 - 25194
Alignment:
Q  16 attacttgctacaattgtggaaagaatggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaag 115  Q
    ||||||||||||||||||||| |||| ||||||||||||| ||||||||| |||||| ||||||||||  |||||| ||||||||||||||| ||||||     
T  25429 attacttgctacaattgtggagagaagggtcatattagtactaagtgtacaaagccggagaaggcggcaagaaaggcgtttgctttgaatgcggaggaac 25330  T
Q  116 tggagcagccaaataatcttatccgaggtatgtg-ttttatcaatagtactcctttgattgcaattattgatattggtgctactctttcttttacatcgg 214  Q
    ||||||| ||  |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||  ||||    
T  25329 tggagcaaccggataatcttatccgaggtatgtgtttttatcaatagtactcctttaattgcaattattgatactggtgctactcattcttttatctcgg 25230  T
Q  215 atagttttgttgagcatttgaagttggttgtaactc 250  Q
     ||||| |||||||| |||||| |||||||||||||    
T  25229 ttagttatgttgagcgtttgaaattggttgtaactc 25194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 16 - 250
Target Start/End: Original strand, 6914 - 7150
Alignment:
Q  16 attacttgctacaattgtggaaagaatggtcatat--tagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagagga 113  Q
    ||||||||||| ||||||||| |||| ||||||||  |||||  |||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||    
T  6914 attacttgctataattgtggagagaagggtcatatattagtaccaagtgtaccaagccgaagaaggcggcgggaaaggtgtttactttgaatgtagagga 7013  T
Q  114 agtggagcagccaaataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgctactctttcttttacatcg 213  Q
     |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||  |||    
T  7014 ggtggagcagccggataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatactggtgctacttattcttttatctcg 7113  T
Q  214 gatagttttgttgagcatttgaagttggttgtaactc 250  Q
    | |||||  ||||| | |||||| |||||||||||||    
T  7114 gttagttgcgttgatcgtttgaaattggttgtaactc 7150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 131; Significance: 5e-68; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 16 - 250
Target Start/End: Complemental strand, 1461 - 1227
Alignment:
Q  16 attacttgctacaattgtggaaagaatggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaag 115  Q
    |||||||| |||||||||||| |||| ||||||||||||| |||||||||||||||||||||||| || | ||||||||||||||||||||| |||||      
T  1461 attacttgttacaattgtggagagaaaggtcatattagtactaagtgtaccaagccgaagaaggcagcggcaaaggtgtttgctttgaatgcggaggagc 1362  T
Q  116 tggagcagccaaataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgctactctttcttttacatcgga 215  Q
    |||||||||   ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||| ||||||||  ||||     
T  1361 tggagcagctggataatcttatccgaggtatgtgttttatcaatagtactcttttgatttcaattattgatactggtgctactcattcttttatctcggt 1262  T
Q  216 tagttttgttgagcatttgaagttggttgtaactc 250  Q
    ||||| |||||| | ||||   |||||||||||||    
T  1261 tagttgtgttgaacgtttgtttttggttgtaactc 1227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 19 - 250
Target Start/End: Complemental strand, 35332 - 35101
Alignment:
Q  19 acttgctacaattgtggaaagaatggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaagtgg 118  Q
    |||||||| ||||||||| |||| |||||||||||||  || ||||||||||| ||||||||||  || || |||||||||||||||||||| || ||||    
T  35332 acttgctataattgtggagagaagggtcatattagtaccaattgtaccaagccaaagaaggcggtggggaaagtgtttgctttgaatgcagaagaggtgg 35233  T
Q  119 agcagccaaataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgctactctttcttttacatcggatag 218  Q
    | |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||  |||| |||    
T  35232 aacagccggataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatactggtgctactcattcttttatctcggttag 35133  T
Q  219 ttttgttgagcatttgaagttggttgtaactc 250  Q
    || |||||| | |||| | |||||||||||||    
T  35132 ttgtgttgaacgtttgtatttggttgtaactc 35101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 16 - 250
Target Start/End: Original strand, 12679 - 12913
Alignment:
Q  16 attacttgctacaattgtggaaagaatggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaag 115  Q
    |||||||| ||||||| |||| |||| | |||||||||||  |||||||||||||| ||||||||||| ||||||||| ||||||||||||| ||||| |    
T  12679 attacttgttacaattctggagagaaagttcatattagtaccaagtgtaccaagccaaagaaggcggcgggaaaggtgattgctttgaatgcggaggagg 12778  T
Q  116 tggagcagccaaataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgctactctttcttttacatcgga 215  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||  | ||||||  ||||     
T  12779 tggagcagccggataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgataatggagatactaatacttttatctcggt 12878  T
Q  216 tagttttgttgagcatttgaagttggttgtaactc 250  Q
    ||||| |||||| | |||||| |||||||||||||    
T  12879 tagttgtgttgaacgtttgaaattggttgtaactc 12913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 127; Significance: 1e-65; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 16 - 250
Target Start/End: Complemental strand, 23508810 - 23508585
Alignment:
Q  16 attacttgctacaattgtggaaagaatggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaag 115  Q
    ||||||||||||||||||||| ||||  |||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||            
T  23508810 attacttgctacaattgtggagagaagagtcatattagtactaagtgtaccaagccgaagaaggcagcgggaaaggtgtttgctttgaatgc-------- 23508719  T
Q  116 tggagcagccaaataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgctactctttcttttacatcgga 215  Q
     ||||||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||  ||||     
T  23508718 -ggagcagtcggataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatactggtgctactcattcttttatctcggt 23508620  T
Q  216 tagttttgttgagcatttgaagttggttgtaactc 250  Q
    ||||| |||||| | |||||| |||| ||||||||    
T  23508619 tagttgtgttgaacgtttgaaattggctgtaactc 23508585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 16 - 250
Target Start/End: Complemental strand, 24584336 - 24584111
Alignment:
Q  16 attacttgctacaattgtggaaagaatggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaag 115  Q
    |||||||| |||||||||||| |||| |||||||||||||         |||||||||||||||| || ||||||||||||||||||||||| ||||| |    
T  24584336 attacttgttacaattgtggagagaagggtcatattagta---------ccaagccgaagaaggcagcgggaaaggtgtttgctttgaatgcggaggagg 24584246  T
Q  116 tggagcagccaaataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgctactctttcttttacatcgga 215  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||  ||||     
T  24584245 tggagcagccggataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatactggtgctactcattcttttatctcggc 24584146  T
Q  216 tagttttgttgagcatttgaagttggttgtaactc 250  Q
    ||||| |||||| | |||| | |||||||||||||    
T  24584145 tagttgtgttgaacgtttggatttggttgtaactc 24584111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 14884365 - 14884416
Alignment:
Q  157 aatagtactcctttgattgcaattattgatattggtgctactctttctttta 208  Q
    |||||||||||||| ||||| |||||||||| ||||||||||| || |||||    
T  14884365 aatagtactcctttaattgctattattgatactggtgctactcattgtttta 14884416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 208
Target Start/End: Complemental strand, 20345276 - 20345225
Alignment:
Q  157 aatagtactcctttgattgcaattattgatattggtgctactctttctttta 208  Q
    |||||||||||||| ||||| |||||||||| ||||||||||| || |||||    
T  20345276 aatagtactcctttaattgctattattgatactggtgctactcattgtttta 20345225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 208
Target Start/End: Complemental strand, 22505673 - 22505622
Alignment:
Q  157 aatagtactcctttgattgcaattattgatattggtgctactctttctttta 208  Q
    |||||||||||||| ||||| |||||||||| ||||||||||| || |||||    
T  22505673 aatagtactcctttaattgctattattgatactggtgctactcattgtttta 22505622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 208
Target Start/End: Complemental strand, 25851091 - 25851015
Alignment:
Q  132 tcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgctactctttctttta 208  Q
    ||||||| ||||||  |||||  | |||||||||| ||| ||||| |||||||||| ||||||||||| || |||||    
T  25851091 tcttatcagaggtacttgtttctttaatagtactcatttaattgctattattgatactggtgctactcattgtttta 25851015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0962 (Bit Score: 124; Significance: 7e-64; HSPs: 1)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 52 - 250
Target Start/End: Complemental strand, 2785 - 2589
Alignment:
Q  52 agtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaagtggagcagccaaataatcttatccgaggtatgtgtt 151  Q
    ||||||||||||||||||| |||||||||||| ||||| |||||||| |||||||||||||||||||||||| |  ||||||||||||||||||||||||    
T  2785 agtaataagtgtaccaagctgaagaaggcggcgggaaaagtgtttgcattgaatgcagaggaagtggagcagtcggataatcttatccgaggtatgtgtt 2686  T
Q  152 ttatcaatagtactcctttgattgcaattattgatattggtgctactctttcttttacatcggatagttttgttgagcatttgaagttggttgtaactc 250  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||  |||| ||||| ||||  || |||||| |||||||||||||    
T  2685 ttatcaataatactcctttgattgcaattattgatactggtgctactcattcttttatctcggttagttgtgtt--gcgtttgaatttggttgtaactc 2589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0673 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: scaffold0673
Description:

Target: scaffold0673; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 38 - 250
Target Start/End: Original strand, 5380 - 5592
Alignment:
Q  38 agaatggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaagtggagcagccaaataatcttat 137  Q
    |||| ||||| ||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||| | |||||| ||  ||||||||||    
T  5380 agaaaggtcaaattagtactaagtgtaccaagccgaagaaggcggcgggaaaagtgtttgctttgaatgcggaggaggcggagcaaccggataatcttat 5479  T
Q  138 ccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgctactctttcttttacatcggatagttttgttgagcatttgaag 237  Q
     || |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||  | || ||||| |||||||| ||||||     
T  5480 tcgtggtatgtgttttatcaatagtactcctttgattgcaattattgatactggtgctactcattcttttatcttggttagttatgttgagcgtttgaaa 5579  T
Q  238 ttggttgtaactc 250  Q
    |||||| ||||||    
T  5580 ttggttataactc 5592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 19 - 250
Target Start/End: Complemental strand, 16157 - 15926
Alignment:
Q  19 acttgctacaattgtggaaagaatggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaagtgg 118  Q
    ||||| || ||||||||| |||| || ||||||||||  ||||||||||||||||| ||||   | ||||| ||||||||||||||| ||||||| ||||    
T  16157 acttgttataattgtggagagaagggccatattagtaccaagtgtaccaagccgaataaggtaacgggaaaagtgtttgctttgaattcagaggaggtgg 16058  T
Q  119 agcagccaaataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgctactctttcttttacatcggatag 218  Q
    |||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||  |||| |||    
T  16057 agcaaccgcataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgttacttattcttttatctcggttag 15958  T
Q  219 ttttgttgagcatttgaagttggttgtaactc 250  Q
    || |||||| | |||| | |||||||||||||    
T  15957 ttgtgttgaacgtttgtatttggttgtaactc 15926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 114; Significance: 6e-58; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 16 - 250
Target Start/End: Complemental strand, 2953 - 2713
Alignment:
Q  16 attacttgctacaattgtggaaagaatggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaag 115  Q
    ||||||||||||||||||||| |||| ||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||    
T  2953 attacttgctacaattgtggagagaagggtcatattagtactaagtgtaccaagccgaagaaggcggcgagaaaggtgtttgctttgaatgcggaggaag 2854  T
Q  116 tggagcagccaaataatcttatccgaggtatgtgttttatcaatagta------ctcctttgattgcaattattgatattggtgctactctttcttttac 209  Q
    ||||||| ||  ||||||||||||||||| |||||| |   |||||||        ||||||||||||||||||||||  |||||||||| ||||||||     
T  2853 tggagcaaccggataatcttatccgaggtctgtgttgtgcgaatagtagcatagtacctttgattgcaattattgataccggtgctactcattcttttat 2754  T
Q  210 atcggatagttttgttgagcatttgaagttggttgtaactc 250  Q
     |||| ||||| |||||||| |||||| |||| ||||||||    
T  2753 ctcggttagttgtgttgagcttttgaaattggctgtaactc 2713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 17 - 250
Target Start/End: Original strand, 3958 - 4190
Alignment:
Q  17 ttacttgctacaattgtggaaagaatggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaagt 116  Q
    ||||||| |||||||||||  |||| |||||||| |||| ||||||||||||||||||||||||||| ||||| |||| | ||||||| || ||||| ||    
T  3958 ttacttgttacaattgtggtgagaagggtcatatcagtactaagtgtaccaagccgaagaaggcggcgggaaaagtgtcttctttgaacgcggaggaggt 4057  T
Q  117 ggagcagccaaataatcttatccgaggtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgctactctttcttttacatcggat 216  Q
    |||| ||| | ||||||||||| ||| |||||| ||||||||||||||||| |||||||||||||| |||| ||||||||||| ||||||||  |||  |    
T  4058 ggagtagctagataatcttatctgagctatgtg-tttatcaatagtactccgttgattgcaattatcgatactggtgctactcattcttttatctcgatt 4156  T
Q  217 agttttgttgagcatttgaagttggttgtaactc 250  Q
    | || |||||||| |||||| |||||||||||||    
T  4157 aattgtgttgagcgtttgaaattggttgtaactc 4190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 43 - 206
Target Start/End: Complemental strand, 3722 - 3559
Alignment:
Q  43 ggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaagtggagcagccaaataatcttatccgag 142  Q
    |||||| | |||| ||||||||||||||||||||||||||  | ||| ||||||||   |||||| || ||||||||||| ||| ||||||||||| |||    
T  3722 ggtcatttcagtactaagtgtaccaagccgaagaaggcggaggaaaaagtgtttgcaccgaatgcggatgaagtggagcaaccagataatcttatctgag 3623  T
Q  143 gtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgctactctttcttt 206  Q
    | |  |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  3622 gaacatgttttatcaatagtactcctttgattgcaattattgatattggtgctactcattcttt 3559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 19 - 173
Target Start/End: Original strand, 9429 - 9583
Alignment:
Q  19 acttgctacaattgtggaaagaatggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaagtgg 118  Q
    |||||||||||||||||  |||| | |||||||||||  || ||||||||||||||||||||||| || ||||||||||||||||||| | | || ||||    
T  9429 acttgctacaattgtggggagaaggatcatattagtaccaattgtaccaagccgaagaaggcggcggggaaggtgtttgctttgaatgaaaaagaggtgg 9528  T
Q  119 agcagccaaataatcttatccgaggtatgtgttttatcaatagtactcctttgat 173  Q
    | |||||  ||||||||||||||||||||||||||||||||||||||| ||||||    
T  9529 aacagccggataatcttatccgaggtatgtgttttatcaatagtactcatttgat 9583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 17 - 155
Target Start/End: Complemental strand, 96775 - 96637
Alignment:
Q  17 ttacttgctacaattgtggaaagaatggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaagt 116  Q
    |||||||||||||||||||| |||| |||||||| |||| ||||||||||||||||||||||||||| |||||  ||||| |||||||| | ||||||||    
T  96775 ttacttgctacaattgtggagagaagggtcatatcagtactaagtgtaccaagccgaagaaggcggcgggaaaaatgttttctttgaatacggaggaagt 96676  T
Q  117 ggagcagccaaataatcttatccgaggtatgtgttttat 155  Q
    |||||||||  || |||||||||||||||||||||||||    
T  96675 ggagcagccggattatcttatccgaggtatgtgttttat 96637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 43 - 250
Target Start/End: Complemental strand, 77653 - 77446
Alignment:
Q  43 ggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaagtggagcagccaaataatcttatccgag 142  Q
    |||||||| ||||  ||||||||||||| |||||| |||||  | |  || ||||| ||||| || ||||| |||||||| ||| ||||||| |||||||    
T  77653 ggtcatatcagtaccaagtgtaccaagctgaagaaagcggcgtggagagtttttgcattgaacgctgaggaggtggagcaaccagataatctaatccgag 77554  T
Q  143 gtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgctactctttcttttacatcggatagttttgttgagcatttgaagttggt 242  Q
     ||||| |||||||||||||||||||||| ||| |||| |||||| ||||||||| | |||||| |  |||  ||||| |||||| | |||||| |||||    
T  77553 atatgtattttatcaatagtactcctttgtttggaattgttgatactggtgctacgcattctttcatctcgcttagttatgttgaacgtttgaatttggt 77454  T
Q  243 tgtaactc 250  Q
    | ||||||    
T  77453 tttaactc 77446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 43 - 206
Target Start/End: Original strand, 20807 - 20970
Alignment:
Q  43 ggtcatattagtaataagtgtaccaagccgaagaaggcggccggaaaggtgtttgctttgaatgcagaggaagtggagcagccaaataatcttatccgag 142  Q
    |||||||| ||||  ||||| ||||||||||| ||||||||  | |  || || || ||||| |||||||||||||||  ||   |||||||||||||||    
T  20807 ggtcatatcagtaccaagtgaaccaagccgaaaaaggcggcgtggagagttttcgcattgaacgcagaggaagtggagttgctggataatcttatccgag 20906  T
Q  143 gtatgtgttttatcaatagtactcctttgattgcaattattgatattggtgctactctttcttt 206  Q
    |||||||||| ||||||||| |||||||||||| |||| |||||| | || |||||| ||||||    
T  20907 gtatgtgtttcatcaatagtgctcctttgattgtaattgttgatactagttctactcattcttt 20970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 15518 - 15479
Alignment:
Q  158 atagtactcctttgattgcaattattgatattggtgctac 197  Q
    ||||||||||||| ||||| ||||||||||||||||||||    
T  15518 atagtactcctttaattgctattattgatattggtgctac 15479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 208
Target Start/End: Complemental strand, 30043 - 29992
Alignment:
Q  157 aatagtactcctttgattgcaattattgatattggtgctactctttctttta 208  Q
    |||||||||||||| ||||| |||||||||| ||||||||||| || |||||    
T  30043 aatagtactcctttaattgctattattgatactggtgctactcattgtttta 29992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 67303 - 67354
Alignment:
Q  157 aatagtactcctttgattgcaattattgatattggtgctactctttctttta 208  Q
    |||||||||||||| ||||| |||||||||| ||||||||||| || |||||    
T  67303 aatagtactcctttaattgctattattgatactggtgctactcattgtttta 67354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 208
Target Start/End: Complemental strand, 41844 - 41793
Alignment:
Q  157 aatagtactcctttgattgcaattattgatattggtgctactctttctttta 208  Q
    |||||||||||||| ||||| |||||||||| ||||||||||| || |||||    
T  41844 aatagtactcctttaattgctattattgatactggtgctactcattgtttta 41793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 39528 - 39579
Alignment:
Q  157 aatagtactcctttgattgcaattattgatattggtgctactctttctttta 208  Q
    |||||||||||||| ||||| |||||||||| ||||||||||| || |||||    
T  39528 aatagtactcctttaattgctattattgatactggtgctactcattgtttta 39579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 514548 - 514599
Alignment:
Q  157 aatagtactcctttgattgcaattattgatattggtgctactctttctttta 208  Q
    |||||||||||||| ||||| |||||||||| ||||||||||| || |||||    
T  514548 aatagtactcctttaattgctattattgatactggtgctactcattgtttta 514599  T

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Target: scaffold0585 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 199
Target Start/End: Original strand, 4284 - 4326
Alignment:
Q  157 aatagtactcctttgattgcaattattgatattggtgctactc 199  Q
    |||||||||||||| ||||| |||||||||| |||||||||||    
T  4284 aatagtactcctttaattgctattattgatactggtgctactc 4326  T

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Target: scaffold0077 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 175
Target Start/End: Original strand, 29941 - 29974
Alignment:
Q  142 ggtatgtgttttatcaatagtactcctttgattg 175  Q
    ||||||||||||||||||||||||| ||||||||    
T  29941 ggtatgtgttttatcaatagtactcttttgattg 29974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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