View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0350_low_8 (Length: 331)

Name: NF0350_low_8
Description: NF0350
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0350_low_8
NF0350_low_8
[»] chr6 (5 HSPs)
chr6 (54-325)||(10641216-10641487)
chr6 (92-324)||(14970060-14970294)
chr6 (133-322)||(9191065-9191255)
chr6 (92-263)||(10906683-10906854)
chr6 (158-263)||(8403753-8403858)
[»] scaffold0145 (1 HSPs)
scaffold0145 (54-325)||(12514-12785)
[»] chr4 (5 HSPs)
chr4 (54-325)||(16284932-16285203)
chr4 (73-263)||(18231435-18231623)
chr4 (74-263)||(11555897-11556084)
chr4 (106-219)||(11098355-11098468)
chr4 (158-283)||(15872798-15872923)
[»] chr3 (9 HSPs)
chr3 (57-325)||(14481522-14481796)
chr3 (158-325)||(17790941-17791108)
chr3 (158-325)||(19099381-19099548)
chr3 (54-166)||(17790811-17790923)
chr3 (54-166)||(19099253-19099365)
chr3 (158-263)||(22159847-22159952)
chr3 (190-263)||(21975283-21975356)
chr3 (190-263)||(21997714-21997787)
chr3 (132-260)||(13926809-13926935)
[»] chr7 (5 HSPs)
chr7 (57-249)||(22614701-22614893)
chr7 (57-249)||(11655439-11655631)
chr7 (57-322)||(20025935-20026200)
chr7 (96-320)||(4531649-4531873)
chr7 (106-209)||(13477487-13477596)
[»] chr5 (6 HSPs)
chr5 (57-325)||(24831922-24832196)
chr5 (57-263)||(13935664-13935869)
chr5 (139-320)||(24615459-24615641)
chr5 (139-320)||(24711857-24712039)
chr5 (139-320)||(24744853-24745035)
chr5 (139-320)||(24757619-24757801)
[»] scaffold1001 (1 HSPs)
scaffold1001 (57-249)||(1354-1545)
[»] chr2 (4 HSPs)
chr2 (73-263)||(44586418-44586609)
chr2 (216-325)||(24786268-24786377)
chr2 (205-320)||(23656360-23656476)
chr2 (158-263)||(16862347-16862452)
[»] chr1 (2 HSPs)
chr1 (132-283)||(1567001-1567152)
chr1 (54-111)||(1567212-1567269)
[»] scaffold0166 (1 HSPs)
scaffold0166 (139-320)||(98-280)
[»] scaffold0385 (1 HSPs)
scaffold0385 (158-263)||(14265-14370)
[»] chr8 (1 HSPs)
chr8 (205-263)||(29293958-29294016)
[»] scaffold0737 (1 HSPs)
scaffold0737 (205-257)||(3634-3686)


Alignment Details
Target: chr6 (Bit Score: 236; Significance: 1e-130; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 54 - 325
Target Start/End: Complemental strand, 10641487 - 10641216
Alignment:
Q  54 aaattaaccattgacactctcatcatcacaacaacattgacatcgtcattctcatcattattataatataacctcataatttcccatcgtagtaatttct 153  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10641487 aaattaaccattgacactctcatcatcacaacaacatagacatcatcattctcatcattattataatataacctcataatttcccatcgtagtaatttct 10641388  T
Q  154 ttacatatatataatattaatcatcatcgctctctatcatagttataggactcctcgtcattactctctatcatccgcttatatcaccaccttatctctt 253  Q
    |||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10641387 ttacatatatataatattaatcgtcatcgctctctgtcacagttataggactcctcgtcattactctctatcatccgcttatatcaccaccttatctctt 10641288  T
Q  254 cattaatccacatctcacgtgtgactcattgcacgccaacatccatttactttattttattattcatctcac 325  Q
    |||||||||||  |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  10641287 cattaatccacgcctcacgtgtgactcattctacgccaacatccatttactttattttattattcatctcac 10641216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 92 - 324
Target Start/End: Original strand, 14970060 - 14970294
Alignment:
Q  92 gacatcgtcattctcatcattattataatataacctcataatttcccatcgtagtaatttctttacatat--atataatattaatcatcatcgctctcta 189  Q
    |||||||||||||||||  ||||||||||||||| |||| |||||||||||  ||||||||| || ||||  |||||||||||| | |||||  ||| |     
T  14970060 gacatcgtcattctcattgttattataatataacatcatcatttcccatcgcggtaatttctataaatatatatataatattaaccgtcatcattctttg 14970159  T
Q  190 tcatagttataggactcctcgtcattactctctatcatccgcttatatcaccaccttatctcttcattaatccacatctcacgtgtgactcattgcacgc 289  Q
    ||| |||| ||||||||||| |||||||||||||||||||  |||||||||||| |||||||||||||||||||||  | ||| ||||||||||  ||      
T  14970160 tcacagttgtaggactcctcatcattactctctatcatccatttatatcaccactttatctcttcattaatccacactttacgagtgactcattctacat 14970259  T
Q  290 caacatccatttactttattttattattcatctca 324  Q
    |||||| | |||| ||||||||||||||| |||||    
T  14970260 caacattcctttattttattttattattcttctca 14970294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 133 - 322
Target Start/End: Original strand, 9191065 - 9191255
Alignment:
Q  133 tttcccatcgtagtaatttctttacatatatataatattaatcatcatcgctctctatcatagttataggactcctcgtcattactctctatcatccgct 232  Q
    |||| ||||||| | |||| || |||||||||| |||| |||||||||| |||| ||||| |||||||||| ||||| |||||||||||||||| ||| |    
T  9191065 tttctcatcgtatttatttattcacatatatattatatcaatcatcatcactctttatcacagttataggattcctcatcattactctctatcaaccgtt 9191164  T
Q  233 tatatcaccaccttatctcttcattaatccacatctcacgtgtgactcattgc-acgccaacatccatttactttattttattattcatct 322  Q
    |||||||||||||||||||||||||||||||  ||| ||||||||  |||| | ||| |||||||| | ||  | ||||||||||||||||    
T  9191165 tatatcaccaccttatctcttcattaatccaactcttacgtgtgatgcatttctacgtcaacatccctctatatgattttattattcatct 9191255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 92 - 263
Target Start/End: Complemental strand, 10906854 - 10906683
Alignment:
Q  92 gacatcgtcattctcatcattattataatataacctcataatttcccatcgtagtaatttctttacatatatataatattaatcatcatcgctctctatc 191  Q
    |||||||||||||||||||||||||||||||||| |||| ||||| |||| || | || | || ||||||| |||||||||| |  | || |||||| ||    
T  10906854 gacatcgtcattctcatcattattataatataacatcatcatttcacatcctatttatatgttgacatatacataatattaacccccttcactctctgtc 10906755  T
Q  192 atagttataggactcctcgtcattactctctatcatccgcttatatcaccaccttatctcttcattaatcca 263  Q
      |||||||||| |||||||||||||||| | ||| ||| |||||||||||||||| || ||||||||||||    
T  10906754 gcagttataggattcctcgtcattactctttgtcaaccgtttatatcaccaccttacctattcattaatcca 10906683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 263
Target Start/End: Complemental strand, 8403858 - 8403753
Alignment:
Q  158 atatatataatattaatcatcatcgctctctatcatagttataggactcctcgtcattactctctatcatccgcttatatcaccaccttatctcttcatt 257  Q
    |||||| ||||||||||||||  | |||| | || | |||||| || ||||| |||||||||||||| | ||| |||||||||||| |  ||||||||||    
T  8403858 atatatttaatattaatcatcgacactctttgtcgtggttatatgattcctcatcattactctctattaaccgtttatatcaccacttattctcttcatt 8403759  T
Q  258 aatcca 263  Q
    ||||||    
T  8403758 aatcca 8403753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 168; Significance: 5e-90; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 54 - 325
Target Start/End: Original strand, 12514 - 12785
Alignment:
Q  54 aaattaaccattgacactctcatcatcacaacaacattgacatcgtcattctcatcattattataatataacctcataatttcccatcgtagtaatttct 153  Q
    ||||||||||| |||||||||||||| |||||||||| |||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  12514 aaattaaccatcgacactctcatcatgacaacaacatagacatcatcattctcatcattattataatataaactcatcatttcccatcgtagtaatttct 12613  T
Q  154 ttacatatatataatattaatcatcatcgctctctatcatagttataggactcctcgtcattactctctatcatccgcttatatcaccaccttatctctt 253  Q
    ||||||||||||||||||| || ||||  |||||| |||||||||||||||||| | |||||||||| |||||||||||||||||||||||||||||  |    
T  12614 ttacatatatataatattactcgtcattactctctgtcatagttataggactccccatcattactctttatcatccgcttatatcaccaccttatcttgt 12713  T
Q  254 cattaatccacatctcacgtgtgactcattgcacgccaacatccatttactttattttattattcatctcac 325  Q
    | ||| |||||| || ||| ||||||||||  | ||||||||||||||| ||||||||| ||||||||||||    
T  12714 cgttattccacaccttacgcgtgactcattctatgccaacatccatttattttattttagtattcatctcac 12785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 164; Significance: 1e-87; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 54 - 325
Target Start/End: Complemental strand, 16285203 - 16284932
Alignment:
Q  54 aaattaaccattgacactctcatcatcacaacaacattgacatcgtcattctcatcattattataatataacctcataatttcccatcgtagtaatttct 153  Q
    ||||||||||| |||||||||||||| |||||||||| |||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  16285203 aaattaaccatcgacactctcatcatgacaacaacatagacatcatcattctcatcattattataatataaactcatcatttcccatcgtagtaatttct 16285104  T
Q  154 ttacatatatataatattaatcatcatcgctctctatcatagttataggactcctcgtcattactctctatcatccgcttatatcaccaccttatctctt 253  Q
    ||||||||||||||||||| || ||||  |||||| |||||||||||||||||| | |||||||||| |||||||| ||||||||||||||||||||  |    
T  16285103 ttacatatatataatattactcgtcattactctctgtcatagttataggactccccatcattactctttatcatccacttatatcaccaccttatcttgt 16285004  T
Q  254 cattaatccacatctcacgtgtgactcattgcacgccaacatccatttactttattttattattcatctcac 325  Q
    | ||| |||||| || ||| ||||||||||  | ||||||||||||||| ||||||||| ||||||||||||    
T  16285003 cgttattccacaccttacgcgtgactcattctatgccaacatccatttattttattttagtattcatctcac 16284932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 73 - 263
Target Start/End: Complemental strand, 18231623 - 18231435
Alignment:
Q  73 tcatcatcacaacaacattgacatcgtcattctcatcattattataatataacctcataatttcccatcgtagtaatttctttacatatatataatatta 172  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||| |||| | ||||||||||||||||||||||||||||||||||    
T  18231623 tcatcatcacaataacatagacatcgtcattctcatcattattataatataacatcatcattttctatcgtagtaatttctttacatatatataatatta 18231524  T
Q  173 atcatcatcgctctctatcatagttataggactcctcgtcattactctctatcatccgcttatatcaccaccttatctcttcattaatcca 263  Q
    ||| ||||| |||| | | | || ||| ||| ||||| |||||||||||||||| ||| |||||||||||||||||||||| |||||||||    
T  18231523 atcgtcatcactctttgttacag-tat-ggattcctcatcattactctctatcaaccgtttatatcaccaccttatctctttattaatcca 18231435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 74 - 263
Target Start/End: Original strand, 11555897 - 11556084
Alignment:
Q  74 catcatcacaacaacattgacatcgtcattctcatcattattataatataacctcataatttcccatcgtagtaatttctttacatatatataatattaa 173  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||| |||  |||||| |||||||||||||||||||||||||||||||||||    
T  11555897 catcatcacaacaacataaacatcgtcattctcatcattattataatataacatcaacatttcctatcgtagtaatttctttacatatatataatattaa 11555996  T
Q  174 tcatcatcgctctctatcatagttataggactcctcgtcattactctctatcatccgcttatatcaccaccttatctcttcattaatcca 263  Q
    || ||||| |||| | | | || ||| ||| || || |||||||||||||||| ||  |||||||||||||||||||||| || ||||||    
T  11555997 tcgtcatcactctttgtgacag-tat-ggattcatcatcattactctctatcaaccatttatatcaccaccttatctctttatcaatcca 11556084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 106 - 219
Target Start/End: Complemental strand, 11098468 - 11098355
Alignment:
Q  106 catcattattataatataacctcataatttcccatcgtagtaatttctttacatatatataatattaatcatcatcgctctctatcatagttataggact 205  Q
    |||||||||||||||||||| |||| ||||||||   ||||||||||||||||||||||||||||||||| ||||| ||||| || | | ||||||||||    
T  11098468 catcattattataatataacatcattatttcccacaatagtaatttctttacatatatataatattaatcgtcatcactctccattacaattataggact 11098369  T
Q  206 cctcgtcattactc 219  Q
    |||| |||||||||    
T  11098368 cctcatcattactc 11098355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 158 - 283
Target Start/End: Complemental strand, 15872923 - 15872798
Alignment:
Q  158 atatatataatattaatcatcatcgctctctatcatagttataggactcctcgtcattactctctatcatccgcttatatcaccaccttatctcttcatt 257  Q
    |||||| ||||||||||||||  | |||| | ||||| |||||||| || || |||||||||||||||| |   |||||||||||| |  ||||||||||    
T  15872923 atatatttaatattaatcatcgacactctttgtcataattataggattcatcatcattactctctatcaactatttatatcaccacttattctcttcatt 15872824  T
Q  258 aatccacatctcacgtgtgactcatt 283  Q
    ||||||  ||| ||| ||||||||||    
T  15872823 aatccaactcttacgcgtgactcatt 15872798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 152; Significance: 2e-80; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 57 - 325
Target Start/End: Complemental strand, 14481796 - 14481522
Alignment:
Q  57 ttaaccattgacactctcatcatcacaacaacattgacatcgtcattctcatcattattataatataacctcataatttcccatcgtagtaatttcttta 156  Q
    |||||||| |||||| |||||||||||||||||| ||||||||||| ||||||| ||||||| ||||||||||| || ||||||||||||||||||||||    
T  14481796 ttaaccatcgacactatcatcatcacaacaacatagacatcgtcatcctcatcaatattatagtataacctcatcatgtcccatcgtagtaatttcttta 14481697  T
Q  157 catatatata------atattaatcatcatcgctctctatcatagttataggactcctcgtcattactctctatcatccgcttatatcaccaccttatct 250  Q
    ||||||||||      ||||||||||||||| |||| | ||| |||||||||||||||| |||||||||||||||||||||||| |||||||   |||||    
T  14481696 catatatatatatataatattaatcatcatcactctttgtcacagttataggactcctcatcattactctctatcatccgcttacatcaccattgtatct 14481597  T
Q  251 cttcattaatccacatctcacgtgtgactcattgcacgccaacatccatttactttattttattattcatctcac 325  Q
    ||||||||||||||  || ||| ||||||||||  |||||||||||| |||| ||||||||||||||||||||||    
T  14481596 cttcattaatccactccttacgcgtgactcattctacgccaacatccctttattttattttattattcatctcac 14481522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 158 - 325
Target Start/End: Original strand, 17790941 - 17791108
Alignment:
Q  158 atatatataatattaatcatcatcgctctctatcatagttataggactcctcgtcattactctctatcatccgcttatatcaccaccttatctcttcatt 257  Q
    |||||||||||||||||||||||| |||||| ||| |||||||||||||||| |||||||||||| ||||||||||||| || |||||||||||||||||    
T  17790941 atatatataatattaatcatcatcactctctgtcaaagttataggactcctcatcattactctctttcatccgcttataccatcaccttatctcttcatt 17791040  T
Q  258 aatccacatctcacgtgtgactcattgcacgccaacatccatttactttattttattattcatctcac 325  Q
    ||||||||  | ||  ||| ||||||  ||||  |||||| ||||||||||  ||||||||| |||||    
T  17791041 aatccacactttactcgtggctcattctacgctgacatccctttactttatcgtattattcacctcac 17791108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 158 - 325
Target Start/End: Original strand, 19099381 - 19099548
Alignment:
Q  158 atatatataatattaatcatcatcgctctctatcatagttataggactcctcgtcattactctctatcatccgcttatatcaccaccttatctcttcatt 257  Q
    |||||||||||||||||||||||| |||||| ||| |||||||||||||||| |||||||||||| ||||||||||||| || |||||||||||||||||    
T  19099381 atatatataatattaatcatcatcactctctgtcaaagttataggactcctcatcattactctctttcatccgcttataccatcaccttatctcttcatt 19099480  T
Q  258 aatccacatctcacgtgtgactcattgcacgccaacatccatttactttattttattattcatctcac 325  Q
    ||||||||  | ||  ||| ||||||  ||||  |||||| ||||||||||  ||||||||| |||||    
T  19099481 aatccacactttactcgtggctcattctacgctgacatccctttactttatcgtattattcacctcac 19099548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 54 - 166
Target Start/End: Original strand, 17790811 - 17790923
Alignment:
Q  54 aaattaaccattgacactctcatcatcacaacaacattgacatcgtcattctcatcattattataatataacctcataatttcccatcgtagtaatttct 153  Q
    ||||||||||| ||| |||||||||||||||||||||  ||||||||||||| ||||| ||| |||||||||||||| |||| | ||||||||||| | |    
T  17790811 aaattaaccatcgactctctcatcatcacaacaacatatacatcgtcattcttatcatcattctaatataacctcatcattttctatcgtagtaatatat 17790910  T
Q  154 ttacatatatata 166  Q
     || |||||||||    
T  17790911 atatatatatata 17790923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 54 - 166
Target Start/End: Original strand, 19099253 - 19099365
Alignment:
Q  54 aaattaaccattgacactctcatcatcacaacaacattgacatcgtcattctcatcattattataatataacctcataatttcccatcgtagtaatttct 153  Q
    ||||||||||| ||| |||||||||||||||||||||  ||||||||||||| ||||| ||| |||||||||||||| |||| | ||||||||||| | |    
T  19099253 aaattaaccatcgactctctcatcatcacaacaacatatacatcgtcattcttatcatcattctaatataacctcatcattttctatcgtagtaatatat 19099352  T
Q  154 ttacatatatata 166  Q
     || |||||||||    
T  19099353 atatatatatata 19099365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 158 - 263
Target Start/End: Original strand, 22159847 - 22159952
Alignment:
Q  158 atatatataatattaatcatcatcgctctctatcatagttataggactcctcgtcattactctctatcatccgcttatatcaccaccttatctcttcatt 257  Q
    |||||| ||||||||||||||  | |||| | |||||||||||||| ||||| |||||||||||||||| ||| |||||||||||  |  |||||| |||    
T  22159847 atatatttaatattaatcatcgacactctttgtcatagttataggattcctcatcattactctctatcaaccgtttatatcaccatttattctcttgatt 22159946  T
Q  258 aatcca 263  Q
    ||||||    
T  22159947 aatcca 22159952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 190 - 263
Target Start/End: Original strand, 21975283 - 21975356
Alignment:
Q  190 tcatagttataggactcctcgtcattactctctatcatccgcttatatcaccaccttatctcttcattaatcca 263  Q
    |||||||||| ||| ||||| |||||||||||||||| ||| |||||||||||  |  |||||| |||||||||    
T  21975283 tcatagttattggattcctcatcattactctctatcaaccgtttatatcaccatttattctcttgattaatcca 21975356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 190 - 263
Target Start/End: Original strand, 21997714 - 21997787
Alignment:
Q  190 tcatagttataggactcctcgtcattactctctatcatccgcttatatcaccaccttatctcttcattaatcca 263  Q
    |||||||||| ||| ||||| |||||||||||||||| ||| |||||||||||  |  |||||| |||||||||    
T  21997714 tcatagttattggattcctcatcattactctctatcaaccgtttatatcaccatttattctcttgattaatcca 21997787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 260
Target Start/End: Complemental strand, 13926935 - 13926809
Alignment:
Q  132 atttcccatcgtagtaatttctttacatatatataatattaatcatcatcgctctctatcatagttataggactcctcgtcattactctctatcatccgc 231  Q
    ||||| ||||||| | |||| |||| ||||||||||||| |||  ||||| ||||  |||| | |||| ||| ||||| || ||||||||||||| |||     
T  13926935 atttctcatcgtatttatttatttaaatatatataatatcaattgtcatcactcttcatcaca-ttat-ggattcctcatcgttactctctatcaaccgt 13926838  T
Q  232 ttatatcaccaccttatctcttcattaat 260  Q
    |||||| ||||| |||| |||||||||||    
T  13926837 ttatataaccactttatttcttcattaat 13926809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 149; Significance: 1e-78; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 57 - 249
Target Start/End: Complemental strand, 22614893 - 22614701
Alignment:
Q  57 ttaaccattgacactctcatcatcacaacaacattgacatcgtcattctcatcattattataatataacctcataatttcccatcgtagtaatttcttta 156  Q
    |||||||| |||||||||||||||||||||| ||  |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  22614893 ttaaccatcgacactctcatcatcacaacaatatatacatcgtcattctcttcattattataatataacctcatcatttcccatcgtagtaatttcttta 22614794  T
Q  157 catatatataatattaatcatcatcgctctctatcatagttataggactcctcgtcattactctctatcatccgcttatatcaccaccttatc 249  Q
    ||||||||||||||||||| ||||| |||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  22614793 catatatataatattaatcgtcatcactctctgtcatagttataggactcctcatcaatactctctatcatccgcttatatcaccaccttatc 22614701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 57 - 249
Target Start/End: Original strand, 11655439 - 11655631
Alignment:
Q  57 ttaaccattgacactctcatcatcacaacaacattgacatcgtcattctcatcattattataatataacctcataatttcccatcgtagtaatttcttta 156  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  11655439 ttaaccatggacactctcatcatcacaacaacatagacatcgtcattctcttcattattataatataacctcatcattttccatcgtagtaatttcttta 11655538  T
Q  157 catatatataatattaatcatcatcgctctctatcatagttataggactcctcgtcattactctctatcatccgcttatatcaccaccttatc 249  Q
    |||||||||||||||||||||| || |||||| ||| || ||||||||||||| ||| || ||| ||||||||||||||||||||||||||||    
T  11655539 catatatataatattaatcatcgtcactctctgtcacagctataggactcctcatcaatattctttatcatccgcttatatcaccaccttatc 11655631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 57 - 322
Target Start/End: Original strand, 20025935 - 20026200
Alignment:
Q  57 ttaaccattgacactctcatcatcacaacaacattgacatcgtcattctcatcattattataatataacctcataatttcccatcgtagtaatttcttta 156  Q
    ||||||||| || |||||||||| |||| ||||| |||||| ||||| ||||  ||||||||||||||| |||| |||| ||||| | ||||||||||||    
T  20025935 ttaaccattaacgctctcatcatgacaaaaacatagacatcatcattgtcattgttattataatataacatcatcatttgccatcatggtaatttcttta 20026034  T
Q  157 catatatataatattaatcatcatcgctctctatcatagttataggactcctcgtcattactctctatcatccgcttatatcaccaccttatctcttcat 256  Q
    |||||||||||||| |||| ||||| |||| | |||||||| ||||||||||| |||||| ||||||||||  | ||||||||| |||||||||||||||    
T  20026035 catatatataatatgaatcgtcatcactctttgtcatagttgtaggactcctcttcattattctctatcatatgtttatatcacaaccttatctcttcat 20026134  T
Q  257 taatccacatctcacgtgtgactcattgcacgccaacatccatttactttattttattattcatct 322  Q
    ||||| ||| || ||| ||||||||||  ||| |||||||| |||| | |||||||||||||||||    
T  20026135 taatcaacaccttacgcgtgactcatttgacgtcaacatccctttattctattttattattcatct 20026200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 96 - 320
Target Start/End: Complemental strand, 4531873 - 4531649
Alignment:
Q  96 tcgtcattctcatcattattataatataacc-tcataatttcccatcgtagtaatttctttacatatatataatattaatcatcatcgctctctatcata 194  Q
    ||||||| |||||||| | || ||||||| | | || ||||| ||| ||| | |||| |||||||||||||||||| |||  ||||| ||||   ||| |    
T  4531873 tcgtcatcctcatcatcaataaaatataagcattattatttctcattgtatttatttatttacatatatataatatcaattgtcatcactcttcgtcaca 4531774  T
Q  195 gttataggactcctcgtcattactctctatcatccgcttatatcaccaccttatctcttcattaatccacatctcacgtgtgactca-ttgcacgccaac 293  Q
     |||| ||| ||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||   || ||  |||||||| ||  ||||||||    
T  4531773 -ttat-ggattcctcatcattactctctatcaaccgtttatatcaccaccttatctcttcattaatccaacccttacacgtgactcatttatacgccaac 4531676  T
Q  294 atccatttactttattttattattcat 320  Q
    | || | || |||||||||||||||||    
T  4531675 acccctctattttattttattattcat 4531649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 13477596 - 13477487
Alignment:
Q  106 catcattattataatataacctcataatttcccatcgtagtaatttctttacatata------tataatattaatcatcatcgctctctatcatagttat 199  Q
    |||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||      ||||||||||||| ||||| |||| | | | ||||||    
T  13477596 catcattattataatataacatcatcctttcccatcgtagtaatttctttacatatatatatatataatattaatcgtcatcactctttgttacagttat 13477497  T
Q  200 aggactcctc 209  Q
    ||||||||||    
T  13477496 aggactcctc 13477487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 144; Significance: 1e-75; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 57 - 325
Target Start/End: Complemental strand, 24832196 - 24831922
Alignment:
Q  57 ttaaccattgacactctcatcatcacaacaacattgacatcgtcattctcatcattattataatataacctcataatttcccatcgtagtaatttcttta 156  Q
    |||||||| |||||| |||||||||| ||||||| ||||||||||||||||||| ||||||| ||||||||||| ||||| |||||||||||||||||||    
T  24832196 ttaaccatcgacactatcatcatcacgacaacatagacatcgtcattctcatcaatattatagtataacctcatcatttctcatcgtagtaatttcttta 24832097  T
Q  157 catatat------ataatattaatcatcatcgctctctatcatagttataggactcctcgtcattactctctatcatccgcttatatcaccaccttatct 250  Q
    |||||||      |||||||||||||||||| |||| | ||| | |||||||||||||| |||||||||||||||||||||||| ||||||| | |||||    
T  24832096 catatatgtatatataatattaatcatcatcactctttgtcacaattataggactcctcatcattactctctatcatccgcttacatcaccatcgtatct 24831997  T
Q  251 cttcattaatccacatctcacgtgtgactcattgcacgccaacatccatttactttattttattattcatctcac 325  Q
    |||||||| || ||  || ||| ||||||||||  |||||||||||| |||| ||||||||||||||||||||||    
T  24831996 cttcattagtcaactccttacgcgtgactcattctacgccaacatccctttattttattttattattcatctcac 24831922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 57 - 263
Target Start/End: Original strand, 13935664 - 13935869
Alignment:
Q  57 ttaaccattgacactctcatcatcacaacaacattgacatcgtcattctcatcattattataatataacctcataatttcccatcgtagtaatttcttta 156  Q
    |||||||| ||||||||||||||||||||||  | ||||| ||| || || |||||||||||||||||| |||| |||| |||||||| | |||  ||||    
T  13935664 ttaaccatcgacactctcatcatcacaacaatgtagacatagtcgttatcttcattattataatataacatcattattt-ccatcgtatttattcattta 13935762  T
Q  157 catatatataatattaatcatcatcgctctctatcatagttataggactcctcgtcattactctctatcatccgcttatatcaccaccttatctc-ttca 255  Q
    |||| ||||| ||| |||  ||||| |||| | |||  ||||||||| ||||  |||||||||||||||| ||| |||||||||||| ||| ||| ||||    
T  13935763 catagatatagtatcaattgtcatcactctttgtcaccgttataggattcctaatcattactctctatcaaccgtttatatcaccacatta-ctcattca 13935861  T
Q  256 ttaatcca 263  Q
    ||||||||    
T  13935862 ttaatcca 13935869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 139 - 320
Target Start/End: Original strand, 24615459 - 24615641
Alignment:
Q  139 atcgtagtaatttctttacatatatataatattaatcatcatcgctctctatcatagttataggactcctcgtcattactctctatcatccgcttatatc 238  Q
    |||||| | |||| || ||||||||| ||||| |||||||||| |||  | ||| | ||||| || ||||| |||||||||||||||| ||  |||||||    
T  24615459 atcgtatttatttattcacatatatacaatatcaatcatcatcactcgttgtcaaaattatatgattcctcatcattactctctatcaaccatttatatc 24615558  T
Q  239 accaccttatctcttcattaatccacatctcacgtgtgactcattgc-acgccaacatccatttactttattttattattcat 320  Q
    ||||| |||| ||||||||| || |  ||| ||| |||||||||| | ||| |||||||| | || |||||||||||| ||||    
T  24615559 accactttatttcttcattattctaactcttacgcgtgactcatttctacgtcaacatccctctattttattttattaatcat 24615641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 139 - 320
Target Start/End: Original strand, 24711857 - 24712039
Alignment:
Q  139 atcgtagtaatttctttacatatatataatattaatcatcatcgctctctatcatagttataggactcctcgtcattactctctatcatccgcttatatc 238  Q
    |||||| | |||| || ||||||||| ||||| |||||||||| |||  | ||| | ||||| || ||||| |||||||||||||||| ||  |||||||    
T  24711857 atcgtatttatttattcacatatatacaatatcaatcatcatcactcgttgtcaaaattatatgattcctcatcattactctctatcaaccatttatatc 24711956  T
Q  239 accaccttatctcttcattaatccacatctcacgtgtgactcattgc-acgccaacatccatttactttattttattattcat 320  Q
    ||||| |||| ||||||||| || |  ||| ||| |||||||||| | ||| |||||||| | || |||||||||||| ||||    
T  24711957 accactttatttcttcattattctaactcttacgcgtgactcatttctacgtcaacatccctctattttattttattaatcat 24712039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 139 - 320
Target Start/End: Original strand, 24744853 - 24745035
Alignment:
Q  139 atcgtagtaatttctttacatatatataatattaatcatcatcgctctctatcatagttataggactcctcgtcattactctctatcatccgcttatatc 238  Q
    |||||| | |||| || ||||||||| ||||| |||||||||| |||  | ||| | ||||| || ||||| |||||||||||||||| ||  |||||||    
T  24744853 atcgtatttatttattcacatatatacaatatcaatcatcatcactcgttgtcaaaattatatgattcctcatcattactctctatcaaccatttatatc 24744952  T
Q  239 accaccttatctcttcattaatccacatctcacgtgtgactcattgc-acgccaacatccatttactttattttattattcat 320  Q
    ||||| |||| ||||||||| || |  ||| ||| |||||||||| | ||| |||||||| | || |||||||||||| ||||    
T  24744953 accactttatttcttcattattctaactcttacgcgtgactcatttctacgtcaacatccctctattttattttattaatcat 24745035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 139 - 320
Target Start/End: Original strand, 24757619 - 24757801
Alignment:
Q  139 atcgtagtaatttctttacatatatataatattaatcatcatcgctctctatcatagttataggactcctcgtcattactctctatcatccgcttatatc 238  Q
    |||||| | |||| || ||||||||| ||||| |||||||||| |||  | ||| | ||||| || ||||| |||||||||||||||| ||  |||||||    
T  24757619 atcgtatttatttattcacatatatacaatatcaatcatcatcactcgttgtcaaaattatatgattcctcatcattactctctatcaaccatttatatc 24757718  T
Q  239 accaccttatctcttcattaatccacatctcacgtgtgactcattgc-acgccaacatccatttactttattttattattcat 320  Q
    ||||| |||| ||||||||| || |  ||| ||| |||||||||| | ||| |||||||| | || |||||||||||| ||||    
T  24757719 accactttatttcttcattattctaactcttacgcgtgactcatttctacgtcaacatccctctattttattttattaatcat 24757801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1001 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold1001
Description:

Target: scaffold1001; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 57 - 249
Target Start/End: Original strand, 1354 - 1545
Alignment:
Q  57 ttaaccattgacactctcatcatcacaacaacattgacatcgtcattctcatcattattataatataacctcataatttcccatcgtagtaatttcttta 156  Q
    ||||||||  ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |||| || ||||||| |||     
T  1354 ttaaccatctacactatcatcatcacaacaacatagacatcgtcattctcatcattattataatataacctcatcattttccattgttgtaatttatttc 1453  T
Q  157 catatatataatattaatcatcatcgctctctatcatagttataggactcctcgtcattactctctatcatccgcttatatcaccaccttatc 249  Q
    || ||||| |||||||||  ||||| |||||| |||  ||||||||||||||| | | |||||| |||||||||| ||| ||| ||| |||||    
T  1454 cacatata-aatattaatagtcatcactctctttcacggttataggactcctcataaatactctatatcatccgcatatgtcatcacattatc 1545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 84; Significance: 7e-40; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 73 - 263
Target Start/End: Complemental strand, 44586609 - 44586418
Alignment:
Q  73 tcatcatcacaacaacattgacatcgtcattctcatcattattataata---taacctcataatttcccatcgtagtaatttctttacatatatataata 169  Q
    |||||||||||||||||  |||| ||||||||||||||||||||| |||   |||| |||| |||||  |||||||||||||||||||||||||||||||    
T  44586609 tcatcatcacaacaacacagacaccgtcattctcatcattattattataatttaacatcatcatttcatatcgtagtaatttctttacatatatataata 44586510  T
Q  170 ttaatcatcatcgctctctatcatagttataggactcctcgtcattactctctatcatccgcttatatcaccaccttatctcttcattaatcca 263  Q
     ||||| ||||| |||| | | | || ||| ||| ||||| |||||||||||||||| ||| |||||||||||||||||||||| |||||||||    
T  44586509 ctaatcgtcatcactctttgttacag-tat-ggattcctcatcattactctctatcaaccgtttatatcaccaccttatctctttattaatcca 44586418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 216 - 325
Target Start/End: Original strand, 24786268 - 24786377
Alignment:
Q  216 actctctatcatccgcttatatcaccaccttatctcttcattaatccacatctcacgtgtgactcattgcacgccaacatccatttactttattttatta 315  Q
    |||||||||||| || |||||||  |||||| ||| |||||||||| | | || |||||||||| |||  ||| |||||||| |||| ||||||||||||    
T  24786268 actctctatcattcgtttatatcttcaccttctcttttcattaatctataccttacgtgtgacttattctacgtcaacatccctttattttattttatta 24786367  T
Q  316 ttcatctcac 325  Q
    ||||||||||    
T  24786368 ttcatctcac 24786377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 205 - 320
Target Start/End: Complemental strand, 23656476 - 23656360
Alignment:
Q  205 tcctcgtcattactctctatcatccgcttatatcaccaccttatctcttcattaatccacatctcacgtgtgactcattgc-acgccaacatccatttac 303  Q
    ||||| |||||||||||||||| ||| |||||||| ||||||||||||| |||||||||   || ||   ||||||||| | ||| |||||||||| ||     
T  23656476 tcctcatcattactctctatcaaccgtttatatcatcaccttatctctttattaatccaacccttacacatgactcatttctacgtcaacatccatctat 23656377  T
Q  304 tttattttattattcat 320  Q
    ||||||| |||||||||    
T  23656376 tttatttcattattcat 23656360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 158 - 263
Target Start/End: Original strand, 16862347 - 16862452
Alignment:
Q  158 atatatataatattaatcatcatcgctctctatcatagttataggactcctcgtcattactctctatcatccgcttatatcaccaccttatctcttcatt 257  Q
    |||||||||||||||||||||  | | || | |  ||||||||||| ||||| |||||| ||| ||||| ||| |||||| ||||| |  ||||||||||    
T  16862347 atatatataatattaatcatcgacaccctttgttgtagttataggattcctcatcattagtctttatcaaccgtttatattaccacttattctcttcatt 16862446  T
Q  258 aatcca 263  Q
    ||||||    
T  16862447 aatcca 16862452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 9e-21; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 132 - 283
Target Start/End: Complemental strand, 1567152 - 1567001
Alignment:
Q  132 atttcccatcgtagtaatttctttacatatatataatattaatcatcatcgctctctatcatagttataggactcctcgtcattactctctatcatccgc 231  Q
    ||||| ||||||| | |||| |||||||||||||||||| |||| ||||| |||| | ||| | ||||| || ||||| | ||||| |||||||  |||     
T  1567152 atttctcatcgtatttatttgtttacatatatataatatcaatcgtcatcactctttgtcacaattatatgattcctcattattaccctctatccaccgt 1567053  T
Q  232 ttatatcaccaccttatctcttcattaatccacatctcacgtgtgactcatt 283  Q
    |||||||||||| || ||||||||||||||||   || ||||||||||||||    
T  1567052 ttatatcaccacattgtctcttcattaatccaacccttacgtgtgactcatt 1567001  T

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Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 111
Target Start/End: Complemental strand, 1567269 - 1567212
Alignment:
Q  54 aaattaaccattgacactctcatcatcacaacaacattgacatcgtcattctcatcat 111  Q
    |||||||||||  ||| | ||||| |||||| ||||| ||||||||||||||||||||    
T  1567269 aaattaaccatcaacattatcatcctcacaataacatagacatcgtcattctcatcat 1567212  T

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Target: scaffold0166 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 139 - 320
Target Start/End: Original strand, 98 - 280
Alignment:
Q  139 atcgtagtaatttctttacatatatataatattaatcatcatcgctctctatcatagttataggactcctcgtcattactctctatcatccgcttatatc 238  Q
    |||||| | |||| || ||||||||| ||||| |||||||||| |||  | ||| | ||||| || ||||| |||||||||||||||| ||  |||||||    
T  98 atcgtatttatttattcacatatatacaatatcaatcatcatcactcgttgtcaaaattatatgattcctcatcattactctctatcaaccatttatatc 197  T
Q  239 accaccttatctcttcattaatccacatctcacgtgtgactcattgc-acgccaacatccatttactttattttattattcat 320  Q
    ||||| |||| ||||||||| || |  ||| ||| |||||||||| | ||| |||||||| | || |||||||||||| ||||    
T  198 accactttatttcttcattattctaactcttacgcgtgactcatttctacgtcaacatccctctattttattttattaatcat 280  T

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Target: scaffold0385 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 158 - 263
Target Start/End: Original strand, 14265 - 14370
Alignment:
Q  158 atatatataatattaatcatcatcgctctctatcatagttataggactcctcgtcattactctctatcatccgcttatatcaccaccttatctcttcatt 257  Q
    |||||||||||||||||||||  | |||| | |||||||||||||| ||||| |  ||||||||||||| ||| ||||||| |||| |  ||| ||||||    
T  14265 atatatataatattaatcatcgacactctttgtcatagttataggattcctcattgttactctctatcaaccgtttatatctccacttattcttttcatt 14364  T
Q  258 aatcca 263  Q
    ||||||    
T  14365 aatcca 14370  T

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Target: chr8 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 205 - 263
Target Start/End: Original strand, 29293958 - 29294016
Alignment:
Q  205 tcctcgtcattactctctatcatccgcttatatcaccaccttatctcttcattaatcca 263  Q
    ||||| |||||||||| ||||| ||| ||| ||||||||||||||||||||||||||||    
T  29293958 tcctcatcattactctatatcaaccgtttaaatcaccaccttatctcttcattaatcca 29294016  T

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Target: scaffold0737 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 205 - 257
Target Start/End: Complemental strand, 3686 - 3634
Alignment:
Q  205 tcctcgtcattactctctatcatccgcttatatcaccaccttatctcttcatt 257  Q
    ||||| |||||||||||||||  ||| ||||||||||||||||||||||||||    
T  3686 tcctcatcattactctctatctaccgtttatatcaccaccttatctcttcatt 3634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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