View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0351-Insertion-2 (Length: 482)
Name: NF0351-Insertion-2
Description: NF0351
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0351-Insertion-2 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 480; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 480; E-Value: 0
Query Start/End: Original strand, 3 - 482
Target Start/End: Original strand, 2347506 - 2347985
Alignment:
| Q |
3 |
caacaatctacaggtgggttctgaagttcaagctgatttagttcaggattgatcaaaacatactcagtgttcattgaaagaaactttttgatgtagcgca |
102 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2347506 |
caacaatctacaggtgggttctgaagttcaagctgatttagttcaggattgatcaaaacatactcagtgttcattgaaagaaactttttgatgtagcgca |
2347605 |
T |
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| Q |
103 |
aaatcctacaaatagacgagaaactaggacgctgagacggatcagtttgccaacattttttgatcaaactcacaagatattttggcgaacgatatggaaa |
202 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2347606 |
aaatcctacaaatagacgagaaactaggacgctgagacggatcagtttgccaacattttttgatcaaactcacaagatattttggcgaacgatatggaaa |
2347705 |
T |
|
| Q |
203 |
caaaggtctctctcctgctttgatattttggttggttctaatcccttgaagatgattgtcctcaaaaggaattttccctgtcaacaactcaaaacatatc |
302 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2347706 |
caaaggtctctctcctgctttgatattttggttggttctaatcccttgaagatgattgtcctcaaaaggaattttccctgtcaacaactcaaaacatatc |
2347805 |
T |
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| Q |
303 |
ataccaaagctatatgcatcggctttctctgagtacttacaagaggtaaaagcatttttcatttgttctagctcagttaaaacctcaggtgcataccaaa |
402 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2347806 |
ataccaaagctatatgcatcggctttctctgagtacttacaagaggtaaaagcatttttcatttgttctagctcagttaaaacctcaggtgcataccaaa |
2347905 |
T |
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| Q |
403 |
ttatagggttaatctcttcaccaattggattatgtgtcggtgaggatctagaagcattataaatttcaccattttcaaca |
482 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2347906 |
ttatagggttaatctcttcaccaattggattatgtgtcggtgaggatctagaagcattataaatttcaccattttcaaca |
2347985 |
T |
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