View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0351-Insertion-8 (Length: 205)
Name: NF0351-Insertion-8
Description: NF0351
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0351-Insertion-8 |
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| [»] chr7 (2 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 182; Significance: 1e-98; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 182; E-Value: 1e-98
Query Start/End: Original strand, 8 - 205
Target Start/End: Original strand, 12919996 - 12920193
Alignment:
| Q |
8 |
caaacagcttgtgaagtcttatggtgttgcgcctctcgaatattctctgccataagcatgatcacctataaccaaatacagaagttacgttttaataaat |
107 |
Q |
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| T |
12919996 |
caaacagcttgagaagtcttatggtgttgcgcctctcgaatattctctgccataagcgtgatcacctataaccaaatacagaagttacgttttaataaat |
12920095 |
T |
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| Q |
108 |
gatttatacaatcatggtaatgttatgcaaagacaaactaatgtattttaacacattaccaactcagaaacaactttagttgggagtaaagacatcaa |
205 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
12920096 |
gatttatacaatcatggtaatgttatgcaaagacaaactaatgtatttaaacacattaccaactcagaaacaactttagttgggagtaaaaacatcaa |
12920193 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 8 - 154
Target Start/End: Complemental strand, 12915227 - 12915081
Alignment:
| Q |
8 |
caaacagcttgtgaagtcttatggtgttgcgcctctcgaatattctctgccataagcatgatcacctataaccaaatacagaagttacgttttaataaat |
107 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
12915227 |
caaacagcttgtgaagtcttatggtgttgcgcctctcgaatattctctgccataagcgtgatcacctataaccaaatacagaagttacgttttaataaat |
12915128 |
T |
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| Q |
108 |
gatttatacaatcatggtaatgttatgcaaagacaaactaatgtatt |
154 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12915127 |
gatttatacaatcatggtaatgttatgcaaagacaaactaatgtatt |
12915081 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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