View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0351_low_5 (Length: 238)
Name: NF0351_low_5
Description: NF0351
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0351_low_5 |
 | |
|
| [»] scaffold0145 (1 HSPs) |
| |
|
| [»] chr4 (4 HSPs) |
| |
|
| [»] chr6 (3 HSPs) |
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|
| [»] chr7 (4 HSPs) |
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| [»] scaffold1001 (1 HSPs) |
| | |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: scaffold0145 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: scaffold0145
Description:
Target: scaffold0145; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 54 - 238
Target Start/End: Original strand, 12514 - 12698
Alignment:
| Q |
54 |
aaattaaccattgaaactctcatcatgacaacaacatagacatcatcattctcatcattattataatacaaactcatcatttcccatcgtagtaatttct |
153 |
Q |
| |
|
||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
12514 |
aaattaaccatcgacactctcatcatgacaacaacatagacatcatcattctcatcattattataatataaactcatcatttcccatcgtagtaatttct |
12613 |
T |
|
| Q |
154 |
ttacatatatataatattactcgtcattactctctgttatagttataggactccccatcattattctttatcatccgcttatatc |
238 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
12614 |
ttacatatatataatattactcgtcattactctctgtcatagttataggactccccatcattactctttatcatccgcttatatc |
12698 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 161; Significance: 5e-86; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 54 - 238
Target Start/End: Complemental strand, 16285203 - 16285019
Alignment:
| Q |
54 |
aaattaaccattgaaactctcatcatgacaacaacatagacatcatcattctcatcattattataatacaaactcatcatttcccatcgtagtaatttct |
153 |
Q |
| |
|
||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
16285203 |
aaattaaccatcgacactctcatcatgacaacaacatagacatcatcattctcatcattattataatataaactcatcatttcccatcgtagtaatttct |
16285104 |
T |
|
| Q |
154 |
ttacatatatataatattactcgtcattactctctgttatagttataggactccccatcattattctttatcatccgcttatatc |
238 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| |||||||| |
|
|
| T |
16285103 |
ttacatatatataatattactcgtcattactctctgtcatagttataggactccccatcattactctttatcatccacttatatc |
16285019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 73 - 238
Target Start/End: Complemental strand, 18231623 - 18231460
Alignment:
| Q |
73 |
tcatcatgacaacaacatagacatcatcattctcatcattattataatacaaactcatcatttcccatcgtagtaatttctttacatatatataatatta |
172 |
Q |
| |
|
||||||| |||| |||||||||||| ||||||||||||||||||||||| || ||||||||| | |||||||||||||||||||||||||||||||||| |
|
|
| T |
18231623 |
tcatcatcacaataacatagacatcgtcattctcatcattattataatataacatcatcattttctatcgtagtaatttctttacatatatataatatta |
18231524 |
T |
|
| Q |
173 |
ctcgtcattactctctgttatagttataggactccccatcattattctttatcatccgcttatatc |
238 |
Q |
| |
|
||||||| ||||| ||||| || ||| ||| ||| |||||||| ||| ||||| ||| ||||||| |
|
|
| T |
18231523 |
atcgtcatcactctttgttacag-tat-ggattcctcatcattactctctatcaaccgtttatatc |
18231460 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 74 - 186
Target Start/End: Original strand, 11555897 - 11556009
Alignment:
| Q |
74 |
catcatgacaacaacatagacatcatcattctcatcattattataatacaaactcatcatttcccatcgtagtaatttctttacatatatataatattac |
173 |
Q |
| |
|
|||||| ||||||||||| ||||| ||||||||||||||||||||||| || ||| ||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
11555897 |
catcatcacaacaacataaacatcgtcattctcatcattattataatataacatcaacatttcctatcgtagtaatttctttacatatatataatattaa |
11555996 |
T |
|
| Q |
174 |
tcgtcattactct |
186 |
Q |
| |
|
||||||| ||||| |
|
|
| T |
11555997 |
tcgtcatcactct |
11556009 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 106 - 216
Target Start/End: Complemental strand, 11098468 - 11098358
Alignment:
| Q |
106 |
catcattattataatacaaactcatcatttcccatcgtagtaatttctttacatatatataatattactcgtcattactctctgttatagttataggact |
205 |
Q |
| |
|
|||||||||||||||| || |||| |||||||| |||||||||||||||||||||||||||||| ||||||| |||||| ||| | |||||||||| |
|
|
| T |
11098468 |
catcattattataatataacatcattatttcccacaatagtaatttctttacatatatataatattaatcgtcatcactctccattacaattataggact |
11098369 |
T |
|
| Q |
206 |
ccccatcatta |
216 |
Q |
| |
|
|| |||||||| |
|
|
| T |
11098368 |
cctcatcatta |
11098358 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 129; Significance: 7e-67; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 54 - 238
Target Start/End: Complemental strand, 10641487 - 10641303
Alignment:
| Q |
54 |
aaattaaccattgaaactctcatcatgacaacaacatagacatcatcattctcatcattattataatacaaactcatcatttcccatcgtagtaatttct |
153 |
Q |
| |
|
|||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||||| |
|
|
| T |
10641487 |
aaattaaccattgacactctcatcatcacaacaacatagacatcatcattctcatcattattataatataacctcataatttcccatcgtagtaatttct |
10641388 |
T |
|
| Q |
154 |
ttacatatatataatattactcgtcattactctctgttatagttataggactccccatcattattctttatcatccgcttatatc |
238 |
Q |
| |
|
||||||||||||||||||| ||||||| |||||||| | |||||||||||||| | |||||| ||| ||||||||||||||||| |
|
|
| T |
10641387 |
ttacatatatataatattaatcgtcatcgctctctgtcacagttataggactcctcgtcattactctctatcatccgcttatatc |
10641303 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 91 - 238
Target Start/End: Original strand, 14970059 - 14970208
Alignment:
| Q |
91 |
agacatcatcattctcatcattattataatacaaactcatcatttcccatcgtagtaatttcttt--acatatatataatattactcgtcattactctct |
188 |
Q |
| |
|
||||||| |||||||||| ||||||||||| || |||||||||||||||| ||||||||| | | ||||||||||||||| |||||| | ||| | |
|
|
| T |
14970059 |
agacatcgtcattctcattgttattataatataacatcatcatttcccatcgcggtaatttctataaatatatatataatattaaccgtcatcattcttt |
14970158 |
T |
|
| Q |
189 |
gttatagttataggactccccatcattattctttatcatccgcttatatc |
238 |
Q |
| |
|
|| | |||| ||||||||| |||||||| ||| |||||||| ||||||| |
|
|
| T |
14970159 |
gtcacagttgtaggactcctcatcattactctctatcatccatttatatc |
14970208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 90 - 238
Target Start/End: Complemental strand, 10906856 - 10906708
Alignment:
| Q |
90 |
tagacatcatcattctcatcattattataatacaaactcatcatttcccatcgtagtaatttctttacatatatataatattactcgtcattactctctg |
189 |
Q |
| |
|
|||||||| ||||||||||||||||||||||| || |||||||||| |||| || | || | || ||||||| ||||||||| | | | |||||||| |
|
|
| T |
10906856 |
tagacatcgtcattctcatcattattataatataacatcatcatttcacatcctatttatatgttgacatatacataatattaacccccttcactctctg |
10906757 |
T |
|
| Q |
190 |
ttatagttataggactccccatcattattctttatcatccgcttatatc |
238 |
Q |
| |
|
| |||||||||| ||| | |||||| ||||| ||| ||| ||||||| |
|
|
| T |
10906756 |
tcgcagttataggattcctcgtcattactctttgtcaaccgtttatatc |
10906708 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 118; Significance: 2e-60; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 57 - 238
Target Start/End: Complemental strand, 22614893 - 22614712
Alignment:
| Q |
57 |
ttaaccattgaaactctcatcatgacaacaacatagacatcatcattctcatcattattataatacaaactcatcatttcccatcgtagtaatttcttta |
156 |
Q |
| |
|
|||||||| || ||||||||||| ||||||| ||| ||||| |||||||| |||||||||||||| || ||||||||||||||||||||||||||||||| |
|
|
| T |
22614893 |
ttaaccatcgacactctcatcatcacaacaatatatacatcgtcattctcttcattattataatataacctcatcatttcccatcgtagtaatttcttta |
22614794 |
T |
|
| Q |
157 |
catatatataatattactcgtcattactctctgttatagttataggactccccatcattattctttatcatccgcttatatc |
238 |
Q |
| |
|
|||||||||||||||| ||||||| ||||||||| |||||||||||||||| ||||| || ||| ||||||||||||||||| |
|
|
| T |
22614793 |
catatatataatattaatcgtcatcactctctgtcatagttataggactcctcatcaatactctctatcatccgcttatatc |
22614712 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 57 - 238
Target Start/End: Original strand, 11655439 - 11655620
Alignment:
| Q |
57 |
ttaaccattgaaactctcatcatgacaacaacatagacatcatcattctcatcattattataatacaaactcatcatttcccatcgtagtaatttcttta |
156 |
Q |
| |
|
|||||||| || ||||||||||| ||||||||||||||||| |||||||| |||||||||||||| || |||||||||| |||||||||||||||||||| |
|
|
| T |
11655439 |
ttaaccatggacactctcatcatcacaacaacatagacatcgtcattctcttcattattataatataacctcatcattttccatcgtagtaatttcttta |
11655538 |
T |
|
| Q |
157 |
catatatataatattactcgtcattactctctgttatagttataggactccccatcattattctttatcatccgcttatatc |
238 |
Q |
| |
|
|||||||||||||||| || || | ||||||||| | || ||||||||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
11655539 |
catatatataatattaatcatcgtcactctctgtcacagctataggactcctcatcaatattctttatcatccgcttatatc |
11655620 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 57 - 227
Target Start/End: Original strand, 20025935 - 20026105
Alignment:
| Q |
57 |
ttaaccattgaaactctcatcatgacaacaacatagacatcatcattctcatcattattataatacaaactcatcatttcccatcgtagtaatttcttta |
156 |
Q |
| |
|
||||||||| | ||||||||||||||| |||||||||||||||||| |||| ||||||||||| || ||||||||| ||||| | |||||||||||| |
|
|
| T |
20025935 |
ttaaccattaacgctctcatcatgacaaaaacatagacatcatcattgtcattgttattataatataacatcatcatttgccatcatggtaatttcttta |
20026034 |
T |
|
| Q |
157 |
catatatataatattactcgtcattactctctgttatagttataggactccccatcattattctttatcat |
227 |
Q |
| |
|
|||||||||||||| | ||||||| ||||| ||| |||||| ||||||||| | |||||||||| |||||| |
|
|
| T |
20026035 |
catatatataatatgaatcgtcatcactctttgtcatagttgtaggactcctcttcattattctctatcat |
20026105 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 106 - 207
Target Start/End: Complemental strand, 13477596 - 13477489
Alignment:
| Q |
106 |
catcattattataatacaaactcatcatttcccatcgtagtaatttctttacatata------tataatattactcgtcattactctctgttatagttat |
199 |
Q |
| |
|
|||||||||||||||| || ||||| |||||||||||||||||||||||||||||| |||||||||| ||||||| ||||| ||||| |||||| |
|
|
| T |
13477596 |
catcattattataatataacatcatcctttcccatcgtagtaatttctttacatatatatatatataatattaatcgtcatcactctttgttacagttat |
13477497 |
T |
|
| Q |
200 |
aggactcc |
207 |
Q |
| |
|
|||||||| |
|
|
| T |
13477496 |
aggactcc |
13477489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 81; Significance: 3e-38; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 57 - 234
Target Start/End: Complemental strand, 14481796 - 14481613
Alignment:
| Q |
57 |
ttaaccattgaaactctcatcatgacaacaacatagacatcatcattctcatcattattataatacaaactcatcatttcccatcgtagtaatttcttta |
156 |
Q |
| |
|
|||||||| || ||| ||||||| ||||||||||||||||| |||| ||||||| ||||||| || || |||||||| |||||||||||||||||||||| |
|
|
| T |
14481796 |
ttaaccatcgacactatcatcatcacaacaacatagacatcgtcatcctcatcaatattatagtataacctcatcatgtcccatcgtagtaatttcttta |
14481697 |
T |
|
| Q |
157 |
catata------tataatattactcgtcattactctctgttatagttataggactccccatcattattctttatcatccgctta |
234 |
Q |
| |
|
|||||| |||||||||| || |||| ||||| ||| | |||||||||||||| |||||||| ||| ||||||||||||| |
|
|
| T |
14481696 |
catatatatatatataatattaatcatcatcactctttgtcacagttataggactcctcatcattactctctatcatccgctta |
14481613 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 54 - 166
Target Start/End: Original strand, 17790811 - 17790923
Alignment:
| Q |
54 |
aaattaaccattgaaactctcatcatgacaacaacatagacatcatcattctcatcattattataatacaaactcatcatttcccatcgtagtaatttct |
153 |
Q |
| |
|
||||||||||| || |||||||||| ||||||||||| ||||| ||||||| ||||| ||| ||||| || |||||||||| | ||||||||||| | | |
|
|
| T |
17790811 |
aaattaaccatcgactctctcatcatcacaacaacatatacatcgtcattcttatcatcattctaatataacctcatcattttctatcgtagtaatatat |
17790910 |
T |
|
| Q |
154 |
ttacatatatata |
166 |
Q |
| |
|
|| ||||||||| |
|
|
| T |
17790911 |
atatatatatata |
17790923 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 54 - 166
Target Start/End: Original strand, 19099253 - 19099365
Alignment:
| Q |
54 |
aaattaaccattgaaactctcatcatgacaacaacatagacatcatcattctcatcattattataatacaaactcatcatttcccatcgtagtaatttct |
153 |
Q |
| |
|
||||||||||| || |||||||||| ||||||||||| ||||| ||||||| ||||| ||| ||||| || |||||||||| | ||||||||||| | | |
|
|
| T |
19099253 |
aaattaaccatcgactctctcatcatcacaacaacatatacatcgtcattcttatcatcattctaatataacctcatcattttctatcgtagtaatatat |
19099352 |
T |
|
| Q |
154 |
ttacatatatata |
166 |
Q |
| |
|
|| ||||||||| |
|
|
| T |
19099353 |
atatatatatata |
19099365 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 158 - 236
Target Start/End: Original strand, 17790941 - 17791019
Alignment:
| Q |
158 |
atatatataatattactcgtcattactctctgttatagttataggactccccatcattattctttatcatccgcttata |
236 |
Q |
| |
|
||||||||||||||| || |||| ||||||||| | |||||||||||||| |||||||| ||| | ||||||||||||| |
|
|
| T |
17790941 |
atatatataatattaatcatcatcactctctgtcaaagttataggactcctcatcattactctctttcatccgcttata |
17791019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 158 - 236
Target Start/End: Original strand, 19099381 - 19099459
Alignment:
| Q |
158 |
atatatataatattactcgtcattactctctgttatagttataggactccccatcattattctttatcatccgcttata |
236 |
Q |
| |
|
||||||||||||||| || |||| ||||||||| | |||||||||||||| |||||||| ||| | ||||||||||||| |
|
|
| T |
19099381 |
atatatataatattaatcatcatcactctctgtcaaagttataggactcctcatcattactctctttcatccgcttata |
19099459 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 77; Significance: 7e-36; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 57 - 234
Target Start/End: Complemental strand, 24832196 - 24832013
Alignment:
| Q |
57 |
ttaaccattgaaactctcatcatgacaacaacatagacatcatcattctcatcattattataatacaaactcatcatttcccatcgtagtaatttcttta |
156 |
Q |
| |
|
|||||||| || ||| ||||||| || |||||||||||||| |||||||||||| ||||||| || || ||||||||||| ||||||||||||||||||| |
|
|
| T |
24832196 |
ttaaccatcgacactatcatcatcacgacaacatagacatcgtcattctcatcaatattatagtataacctcatcatttctcatcgtagtaatttcttta |
24832097 |
T |
|
| Q |
157 |
cat------atatataatattactcgtcattactctctgttatagttataggactccccatcattattctttatcatccgctta |
234 |
Q |
| |
|
||| ||||||||||||| || |||| ||||| ||| | | |||||||||||| |||||||| ||| ||||||||||||| |
|
|
| T |
24832096 |
catatatgtatatataatattaatcatcatcactctttgtcacaattataggactcctcatcattactctctatcatccgctta |
24832013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 57 - 238
Target Start/End: Original strand, 13935664 - 13935844
Alignment:
| Q |
57 |
ttaaccattgaaactctcatcatgacaacaacatagacatcatcattctcatcattattataatacaaactcatcatttcccatcgtagtaatttcttta |
156 |
Q |
| |
|
|||||||| || ||||||||||| ||||||| ||||||| || || || |||||||||||||| || |||| |||| |||||||| | ||| |||| |
|
|
| T |
13935664 |
ttaaccatcgacactctcatcatcacaacaatgtagacatagtcgttatcttcattattataatataacatcattattt-ccatcgtatttattcattta |
13935762 |
T |
|
| Q |
157 |
catatatataatattactcgtcattactctctgttatagttataggactccccatcattattctttatcatccgcttatatc |
238 |
Q |
| |
|
|||| ||||| ||| | | ||||| ||||| ||| | ||||||||| ||| ||||||| ||| ||||| ||| ||||||| |
|
|
| T |
13935763 |
catagatatagtatcaattgtcatcactctttgtcaccgttataggattcctaatcattactctctatcaaccgtttatatc |
13935844 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1001 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold1001
Description:
Target: scaffold1001; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 73 - 231
Target Start/End: Original strand, 1370 - 1527
Alignment:
| Q |
73 |
tcatcatgacaacaacatagacatcatcattctcatcattattataatacaaactcatcatttcccatcgtagtaatttctttacatatatataatatta |
172 |
Q |
| |
|
||||||| ||||||||||||||||| ||||||||||||||||||||||| || |||||||||| |||| || ||||||| ||| || ||||| ||||||| |
|
|
| T |
1370 |
tcatcatcacaacaacatagacatcgtcattctcatcattattataatataacctcatcattttccattgttgtaatttatttccacatata-aatatta |
1468 |
T |
|
| Q |
173 |
ctcgtcattactctctgttatagttataggactccccatcattattctttatcatccgc |
231 |
Q |
| |
|
| ||||| ||||||| | | ||||||||||||| ||| | || ||| |||||||||| |
|
|
| T |
1469 |
atagtcatcactctctttcacggttataggactcctcataaatactctatatcatccgc |
1527 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 73 - 238
Target Start/End: Complemental strand, 44586609 - 44586443
Alignment:
| Q |
73 |
tcatcatgacaacaacatagacatcatcattctcatcattattataatac---aaactcatcatttcccatcgtagtaatttctttacatatatataata |
169 |
Q |
| |
|
||||||| ||||||||| ||||| | ||||||||||||||||||| ||| || |||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
44586609 |
tcatcatcacaacaacacagacaccgtcattctcatcattattattataatttaacatcatcatttcatatcgtagtaatttctttacatatatataata |
44586510 |
T |
|
| Q |
170 |
ttactcgtcattactctctgttatagttataggactccccatcattattctttatcatccgcttatatc |
238 |
Q |
| |
|
|| ||||||| ||||| ||||| || ||| ||| ||| |||||||| ||| ||||| ||| ||||||| |
|
|
| T |
44586509 |
ctaatcgtcatcactctttgttacag-tat-ggattcctcatcattactctctatcaaccgtttatatc |
44586443 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 186
Target Start/End: Complemental strand, 1567154 - 1567098
Alignment:
| Q |
130 |
tcatttcccatcgtagtaatttctttacatatatataatattactcgtcattactct |
186 |
Q |
| |
|
||||||| ||||||| | |||| |||||||||||||||||| | ||||||| ||||| |
|
|
| T |
1567154 |
tcatttctcatcgtatttatttgtttacatatatataatatcaatcgtcatcactct |
1567098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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