View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0352-INSERTION-4 (Length: 250)
Name: NF0352-INSERTION-4
Description: NF0352
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0352-INSERTION-4 |
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Alignment Details
Target: chr3 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 8 - 248
Target Start/End: Complemental strand, 47279075 - 47278835
Alignment:
| Q |
8 |
gttaccatgttagtgcttacctttctcacacactttttaaaagtttaattgatatcaacatgataatgcacttagtgagatttgtatcttctctttaatt |
107 |
Q |
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| T |
47279075 |
gttaccatgttagtgcttacctttctcacacactttttaaaagtttaattgatatcaacatgataatgcacttagtgagatttgtatattctctttaatt |
47278976 |
T |
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| Q |
108 |
gatttcaatttcaacatgagcggattatatctccatcytcttaccattaaaagtttacttgtgtttagttttgctgcggctataattgatcttgataaaa |
207 |
Q |
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| T |
47278975 |
gatttcaatttcaacatgagcggattatatctccatcttcttaccattaaaagtttacttgtgtttagttttgctgcggctataattgatcttgataaaa |
47278876 |
T |
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| Q |
208 |
tttagttttaaaagttagattttgattaaaagtgggatttt |
248 |
Q |
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| T |
47278875 |
tttagttttaaaagttagattttgattaaaagtgggatttt |
47278835 |
T |
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