View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend Query Query hiting target
Query hiting target's complemental strand Query's complemental strand hiting target
Query's complemental strand hiting target's complemental strand
Alignment Overview
Query: NF0355_low_14 (Length: 253)
Name: NF0355_low_14
Description: NF0355
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[» ] NF0355_low_14
Alignment Details
Target: chr4 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 37565354 - 37565130
Alignment:
Q
1
taaaaaccaagagaaagaaatgtcaaagcctggatagtggattcattgtgtggccattggccatgcaattttcaagttgagtattgataaataatgaaat
100
Q
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
T
37565354
taaaaaccaagagaaagaaatgtcaaagcctggatagtggattcattgtgtggccattggccatgcaattttcaagttgagtattgataaataatgaaat
37565255
T
Q
101
gctgcaaaattaaactagatctttaaattcactgtccaatacattgcatgagcatggatttgtttaagctaattgatttagcgcatgtttgttttgacgg
200
Q
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
T
37565254
gctgcaaaattaaactagctctttaaattcactgtccaatacattgcatgagcatggatttgtttaagctaattgatttagcgtgtgtttgttttgacgg
37565155
T
Q
201
tggatacccatcaaatgtaggtatt
225
Q
|||||||||||||||||||||||||
T
37565154
tggatacccatcaaatgtaggtatt
37565130
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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