View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend Query Query hiting target
Query hiting target's complemental strand Query's complemental strand hiting target
Query's complemental strand hiting target's complemental strand
Alignment Overview
Query: NF0355_low_4 (Length: 454)
Name: NF0355_low_4
Description: NF0355
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[» ] NF0355_low_4
Alignment Details
Target: chr7 (Bit Score: 276; Significance: 1e-154; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 152 - 447
Target Start/End: Original strand, 46892136 - 46892431
Alignment:
Q
152
gcactccacaacctcatcctctccatcctctccctcattatggctattggcacctccctcaccatcctaacccacacccccaacctccgctccaccacca
251
Q
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
T
46892136
gcactccacaacctcatcctctccatcctctccctcattatggctattggcacctccctcaccatcctaactcacacccccaacctccgctccaccacca
46892235
T
Q
252
tctgtttccctcctcatacccctccaaatggtcccctcttcttttgggcctacatcttctccctctcaaaatatcttgaattcattgacactctcttcat
351
Q
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
T
46892236
tatgtttccctcctcatacccctccaaatggtcccctcttcttttgggcctacatcttctacctctcaaaatatcttgaattcattgacactctcttcat
46892335
T
Q
352
aatcctatcaagatccatcaaacgcctctcattcctccacgtgtaccatcattcaaccgtcccagtcatgtgttatctatggcttaattcatctca
447
Q
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
T
46892336
catcctatcaagatccatcaaacgcctctcattcctccacgtgtaccatcattcaaccgtcccagtcatgtgttatctatggcttaattcttctca
46892431
T
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