View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0355_low_4 (Length: 454)
Name: NF0355_low_4
Description: NF0355
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0355_low_4 |
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Alignment Details
Target: chr7 (Bit Score: 276; Significance: 1e-154; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 152 - 447
Target Start/End: Original strand, 46892136 - 46892431
Alignment:
| Q |
152 |
gcactccacaacctcatcctctccatcctctccctcattatggctattggcacctccctcaccatcctaacccacacccccaacctccgctccaccacca |
251 |
Q |
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| T |
46892136 |
gcactccacaacctcatcctctccatcctctccctcattatggctattggcacctccctcaccatcctaactcacacccccaacctccgctccaccacca |
46892235 |
T |
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| Q |
252 |
tctgtttccctcctcatacccctccaaatggtcccctcttcttttgggcctacatcttctccctctcaaaatatcttgaattcattgacactctcttcat |
351 |
Q |
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| T |
46892236 |
tatgtttccctcctcatacccctccaaatggtcccctcttcttttgggcctacatcttctacctctcaaaatatcttgaattcattgacactctcttcat |
46892335 |
T |
|
| Q |
352 |
aatcctatcaagatccatcaaacgcctctcattcctccacgtgtaccatcattcaaccgtcccagtcatgtgttatctatggcttaattcatctca |
447 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
46892336 |
catcctatcaagatccatcaaacgcctctcattcctccacgtgtaccatcattcaaccgtcccagtcatgtgttatctatggcttaattcttctca |
46892431 |
T |
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