View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0356_low_13 (Length: 209)

Name: NF0356_low_13
Description: NF0356
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0356_low_13
NF0356_low_13
[»] chr8 (1 HSPs)
chr8 (104-209)||(9699671-9699776)


Alignment Details
Target: chr8 (Bit Score: 102; Significance: 8e-51; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 104 - 209
Target Start/End: Original strand, 9699671 - 9699776
Alignment:
104 aacctgtgcagcagcgtgattcttgccaaggaacaattaaaatctgaactccttaccaaggttggtttgtggagcatcttagaagtagctgatctgatcg 203  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
9699671 aacctgtacagcagcgtgattcttgccaaggaacaattaaaatctgaactccttaccaaggttggtttgtggagcatcttagaagtagctgatctgatcg 9699770  T
204 gtggat 209  Q
    ||||||    
9699771 gtggat 9699776  T

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