View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0356_low_3 (Length: 560)

Name: NF0356_low_3
Description: NF0356
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0356_low_3
NF0356_low_3
[»] scaffold0026 (1 HSPs)
scaffold0026 (19-474)||(12437-12872)
[»] scaffold0634 (2 HSPs)
scaffold0634 (19-419)||(2747-3147)
scaffold0634 (403-439)||(3181-3217)
[»] chr2 (21 HSPs)
chr2 (19-471)||(26582856-26583313)
chr2 (316-474)||(5706610-5706768)
chr2 (19-356)||(23168954-23169294)
chr2 (19-356)||(23580211-23580551)
chr2 (322-477)||(23878326-23878481)
chr2 (301-424)||(29281353-29281475)
chr2 (293-455)||(25181446-25181606)
chr2 (317-455)||(9949-10086)
chr2 (244-477)||(23062983-23063216)
chr2 (244-419)||(23089604-23089779)
chr2 (237-439)||(26884498-26884701)
chr2 (244-419)||(23102032-23102207)
chr2 (313-419)||(21907746-21907852)
chr2 (244-387)||(24660876-24661019)
chr2 (293-387)||(27208324-27208417)
chr2 (293-387)||(27210659-27210752)
chr2 (415-477)||(23264551-23264613)
chr2 (20-51)||(20261005-20261036)
chr2 (19-47)||(200822-200850)
chr2 (19-47)||(6744292-6744320)
chr2 (19-47)||(27367551-27367579)
[»] chr6 (30 HSPs)
chr6 (19-471)||(29614738-29615195)
chr6 (279-474)||(12167637-12167832)
chr6 (279-474)||(19286546-19286741)
chr6 (279-472)||(19877730-19877923)
chr6 (279-474)||(19883506-19883701)
chr6 (279-474)||(19786455-19786650)
chr6 (316-474)||(34640575-34640733)
chr6 (316-474)||(34647249-34647407)
chr6 (314-474)||(25470290-25470451)
chr6 (339-472)||(21365067-21365200)
chr6 (339-472)||(23969049-23969182)
chr6 (313-419)||(18799818-18799924)
chr6 (317-455)||(20008493-20008630)
chr6 (150-419)||(25396390-25396658)
chr6 (244-419)||(21565761-21565936)
chr6 (252-444)||(19471891-19472082)
chr6 (237-378)||(19300359-19300500)
chr6 (20-136)||(19786751-19786866)
chr6 (20-136)||(12167420-12167535)
chr6 (20-136)||(19877513-19877628)
chr6 (20-136)||(19883289-19883404)
chr6 (20-136)||(19286329-19286444)
chr6 (415-474)||(24513370-24513429)
chr6 (301-439)||(29097221-29097359)
chr6 (301-378)||(9099694-9099770)
chr6 (293-378)||(11289294-11289378)
chr6 (20-51)||(12941981-12942012)
chr6 (402-439)||(31251879-31251916)
chr6 (294-357)||(9186841-9186903)
chr6 (19-47)||(24562463-24562491)
[»] chr3 (26 HSPs)
chr3 (20-471)||(41455687-41456142)
chr3 (23-477)||(18914193-18914646)
chr3 (327-471)||(24192274-24192418)
chr3 (301-438)||(14865201-14865338)
chr3 (313-419)||(16802037-16802143)
chr3 (316-417)||(55499698-55499799)
chr3 (240-413)||(13324376-13324549)
chr3 (88-145)||(18136117-18136174)
chr3 (361-477)||(17241085-17241201)
chr3 (240-357)||(13302844-13302961)
chr3 (295-473)||(10415123-10415301)
chr3 (295-473)||(10421793-10421971)
chr3 (362-455)||(17131147-17131240)
chr3 (404-473)||(10390034-10390104)
chr3 (240-357)||(13313520-13313637)
chr3 (362-419)||(12034015-12034072)
chr3 (301-439)||(19235629-19235767)
chr3 (88-141)||(18129607-18129660)
chr3 (20-51)||(12304930-12304961)
chr3 (293-357)||(12034057-12034119)
chr3 (19-47)||(13968801-13968829)
chr3 (19-47)||(13974276-13974304)
chr3 (19-47)||(14084712-14084740)
chr3 (19-47)||(14090113-14090141)
chr3 (19-47)||(24123171-24123199)
chr3 (19-47)||(49399654-49399682)
[»] chr7 (30 HSPs)
chr7 (216-471)||(13742921-13743174)
chr7 (19-471)||(13123506-13123967)
chr7 (19-471)||(12710435-12710896)
chr7 (279-474)||(13006706-13006901)
chr7 (316-474)||(12591230-12591389)
chr7 (339-472)||(3857953-3858087)
chr7 (317-455)||(2464736-2464874)
chr7 (301-455)||(16090442-16090595)
chr7 (244-477)||(16676623-16676845)
chr7 (244-477)||(17650859-17651081)
chr7 (301-455)||(29181654-29181807)
chr7 (343-455)||(20311597-20311709)
chr7 (252-477)||(13678770-13678995)
chr7 (313-419)||(11389918-11390024)
chr7 (19-136)||(13742686-13742803)
chr7 (244-449)||(46625259-46625464)
chr7 (294-409)||(11383440-11383554)
chr7 (316-439)||(14320192-14320316)
chr7 (362-455)||(2966383-2966476)
chr7 (362-455)||(20906993-20907086)
chr7 (20-136)||(13006489-13006604)
chr7 (404-451)||(13678982-13679030)
chr7 (20-51)||(11303033-11303064)
chr7 (415-465)||(21231532-21231582)
chr7 (294-419)||(21231567-21231690)
chr7 (404-440)||(13664450-13664487)
chr7 (19-47)||(4280144-4280172)
chr7 (88-132)||(13318007-13318051)
chr7 (19-47)||(19616476-19616504)
chr7 (293-357)||(20907071-20907133)
[»] chr4 (16 HSPs)
chr4 (150-474)||(8046420-8046744)
chr4 (316-474)||(53483013-53483171)
chr4 (301-455)||(16147376-16147529)
chr4 (293-455)||(11847453-11847614)
chr4 (294-477)||(15407438-15407608)
chr4 (296-449)||(15244566-15244719)
chr4 (327-419)||(14486052-14486144)
chr4 (296-449)||(13887138-13887289)
chr4 (296-449)||(13887995-13888146)
chr4 (88-145)||(14555881-14555938)
chr4 (296-445)||(15307471-15307620)
chr4 (19-136)||(8046777-8046893)
chr4 (237-289)||(14485985-14486037)
chr4 (293-372)||(27905613-27905691)
chr4 (20-51)||(15533967-15533998)
chr4 (23-51)||(14048388-14048416)
[»] scaffold1773 (2 HSPs)
scaffold1773 (150-471)||(324-644)
scaffold1773 (19-136)||(153-269)
[»] chr8 (13 HSPs)
chr8 (19-471)||(23865615-23866078)
chr8 (293-455)||(24321216-24321376)
chr8 (364-474)||(17053949-17054060)
chr8 (19-136)||(19902808-19902924)
chr8 (294-477)||(25111338-25111508)
chr8 (343-477)||(14057148-14057271)
chr8 (252-419)||(18613529-18613695)
chr8 (90-145)||(19987990-19988045)
chr8 (23-77)||(21282245-21282300)
chr8 (20-111)||(17053780-17053870)
chr8 (244-288)||(21931018-21931062)
chr8 (19-47)||(23825305-23825333)
chr8 (19-47)||(30766917-30766945)
[»] scaffold0117 (1 HSPs)
scaffold0117 (19-471)||(9167-9628)
[»] scaffold0029 (3 HSPs)
scaffold0029 (19-471)||(110939-111378)
scaffold0029 (326-455)||(91747-91876)
scaffold0029 (326-455)||(97473-97602)
[»] chr5 (22 HSPs)
chr5 (20-474)||(23527632-23528099)
chr5 (339-472)||(28889925-28890058)
chr5 (339-472)||(28896629-28896762)
chr5 (339-472)||(28909877-28910010)
chr5 (339-472)||(28931569-28931702)
chr5 (339-472)||(28946272-28946405)
chr5 (293-455)||(19236250-19236410)
chr5 (293-455)||(22467130-22467290)
chr5 (293-455)||(22460506-22460666)
chr5 (339-472)||(28933070-28933205)
chr5 (294-451)||(18408491-18408647)
chr5 (293-439)||(34829432-34829578)
chr5 (88-145)||(22232436-22232493)
chr5 (404-474)||(20819618-20819689)
chr5 (404-474)||(20826718-20826789)
chr5 (301-439)||(20781102-20781240)
chr5 (301-439)||(20772327-20772465)
chr5 (301-439)||(24930489-24930627)
chr5 (367-416)||(22439321-22439370)
chr5 (20-51)||(37805280-37805311)
chr5 (19-47)||(1857471-1857499)
chr5 (19-47)||(21675439-21675467)
[»] scaffold0456 (2 HSPs)
scaffold0456 (190-474)||(241-504)
scaffold0456 (190-474)||(7386-7649)
[»] scaffold0025 (1 HSPs)
scaffold0025 (327-471)||(14977-15121)
[»] chr1 (12 HSPs)
chr1 (279-472)||(41111214-41111407)
chr1 (293-455)||(21705625-21705785)
chr1 (293-455)||(21710167-21710328)
chr1 (293-455)||(20851678-20851838)
chr1 (317-455)||(20858305-20858442)
chr1 (237-440)||(19961481-19961684)
chr1 (294-419)||(18712098-18712223)
chr1 (88-145)||(20941657-20941714)
chr1 (20-136)||(41110997-41111112)
chr1 (244-449)||(22030298-22030504)
chr1 (19-47)||(21542237-21542265)
chr1 (19-47)||(42095871-42095899)
[»] scaffold0154 (1 HSPs)
scaffold0154 (239-419)||(30194-30374)
[»] scaffold0085 (1 HSPs)
scaffold0085 (293-455)||(4217-4377)
[»] scaffold0247 (1 HSPs)
scaffold0247 (313-474)||(10679-10829)
[»] scaffold0053 (2 HSPs)
scaffold0053 (301-455)||(80036-80189)
scaffold0053 (150-450)||(81764-82063)
[»] scaffold0924 (1 HSPs)
scaffold0924 (368-471)||(1343-1446)
[»] scaffold0138 (1 HSPs)
scaffold0138 (244-449)||(1117-1322)
[»] scaffold0222 (1 HSPs)
scaffold0222 (294-477)||(16121-16303)
[»] scaffold0249 (1 HSPs)
scaffold0249 (88-218)||(7537-7667)
[»] scaffold0001 (3 HSPs)
scaffold0001 (237-439)||(493588-493791)
scaffold0001 (19-136)||(174440-174557)
scaffold0001 (244-387)||(525062-525204)
[»] scaffold0317 (2 HSPs)
scaffold0317 (252-477)||(663-888)
scaffold0317 (404-451)||(875-923)
[»] scaffold0476 (1 HSPs)
scaffold0476 (316-438)||(3854-3976)
[»] scaffold0232 (1 HSPs)
scaffold0232 (244-449)||(18961-19166)
[»] scaffold0090 (1 HSPs)
scaffold0090 (275-439)||(17497-17661)
[»] scaffold0023 (2 HSPs)
scaffold0023 (362-455)||(134867-134960)
scaffold0023 (293-357)||(134820-134882)
[»] scaffold0461 (2 HSPs)
scaffold0461 (294-477)||(581-752)
scaffold0461 (294-378)||(7605-7688)
[»] scaffold0310 (1 HSPs)
scaffold0310 (295-419)||(6861-6983)
[»] scaffold0004 (3 HSPs)
scaffold0004 (244-419)||(129217-129393)
scaffold0004 (252-387)||(116173-116308)
scaffold0004 (415-477)||(116325-116388)
[»] scaffold0028 (4 HSPs)
scaffold0028 (150-417)||(65311-65577)
scaffold0028 (344-449)||(1467-1572)
scaffold0028 (19-47)||(46947-46975)
scaffold0028 (19-47)||(52352-52380)
[»] scaffold0453 (1 HSPs)
scaffold0453 (293-439)||(11112-11258)
[»] scaffold0031 (2 HSPs)
scaffold0031 (244-449)||(121200-121406)
scaffold0031 (244-449)||(132077-132283)
[»] scaffold0483 (1 HSPs)
scaffold0483 (237-440)||(11569-11773)
[»] scaffold0077 (3 HSPs)
scaffold0077 (329-419)||(4191-4281)
scaffold0077 (88-140)||(17972-18024)
scaffold0077 (88-140)||(23605-23657)
[»] scaffold0261 (2 HSPs)
scaffold0261 (237-439)||(24131-24333)
scaffold0261 (403-439)||(24070-24106)
[»] scaffold0124 (2 HSPs)
scaffold0124 (313-419)||(34908-35014)
scaffold0124 (421-477)||(34861-34917)
[»] scaffold0348 (2 HSPs)
scaffold0348 (88-145)||(1527-1584)
scaffold0348 (23-78)||(3107-3163)
[»] scaffold0094 (1 HSPs)
scaffold0094 (252-449)||(51552-51749)
[»] scaffold0235 (3 HSPs)
scaffold0235 (313-419)||(23226-23332)
scaffold0235 (415-464)||(15475-15524)
scaffold0235 (294-419)||(15509-15633)
[»] scaffold0139 (1 HSPs)
scaffold0139 (150-478)||(15521-15835)
[»] scaffold0107 (1 HSPs)
scaffold0107 (294-419)||(41160-41283)
[»] scaffold0034 (1 HSPs)
scaffold0034 (293-411)||(72631-72748)
[»] scaffold0020 (1 HSPs)
scaffold0020 (294-419)||(102499-102623)
[»] scaffold0006 (1 HSPs)
scaffold0006 (421-471)||(49595-49645)
[»] scaffold0720 (1 HSPs)
scaffold0720 (293-378)||(3882-3966)
[»] scaffold0206 (1 HSPs)
scaffold0206 (301-378)||(18045-18121)
[»] scaffold1061 (1 HSPs)
scaffold1061 (256-361)||(1712-1817)
[»] scaffold2054 (1 HSPs)
scaffold2054 (240-378)||(14-152)
[»] scaffold0011 (2 HSPs)
scaffold0011 (23-77)||(152546-152601)
scaffold0011 (19-47)||(174529-174557)
[»] scaffold0535 (1 HSPs)
scaffold0535 (25-72)||(5972-6020)
[»] scaffold0207 (1 HSPs)
scaffold0207 (23-51)||(8775-8803)
[»] scaffold0169 (1 HSPs)
scaffold0169 (244-288)||(6299-6343)
[»] scaffold0106 (1 HSPs)
scaffold0106 (19-47)||(38582-38610)
[»] scaffold0076 (2 HSPs)
scaffold0076 (19-47)||(30113-30141)
scaffold0076 (19-47)||(35514-35542)


Alignment Details
Target: scaffold0026 (Bit Score: 351; Significance: 0; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 351; E-Value: 0
Query Start/End: Original strand, 19 - 474
Target Start/End: Complemental strand, 12872 - 12437
Alignment:
Q  19 aacctgtgtatatctacatacaactcaactacacatatattccatatgacttactactccgagaattctaacaatccagaacatacacaattaattatga 118  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |    
T  12872 aacctgtgtatatctacatacaactcaactacacatatatctcatatgacttactactccgagagttctaacaatccagaacatacacaattaattataa 12773  T
Q  119 ttatgcgcatacatcaatttcattcaatagttatatattcacttgattcctcactcaatcatctccaaaattcactaacattaaccaattcgatcaccgg 218  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  12772 ttatgcgcatacatcaatttcattcaatagttatacattcacttgatttcttactcaatcatctccaaaattcactaacatcaaccaattcgatcaccgg 12673  T
Q  219 cttgttctagtatgattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaagtcccctcgtgcacgaagcaaaagtt 318  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12672 cttgttctagtaggattctgatacctatacaagggatatacaagttaaaggaaatattttagaatgctcaagaagtcccctcgtgcacgaagcaaaagtt 12573  T
Q  319 cagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgc 418  Q
    |||||||||||||||||||||||||||||||||||                    |||||||||||||||||||||||||||||||||||||||||||||    
T  12572 cagaaagaggctgactaaggctcacttcgcttaag--------------------cgaccggcttacagtaggtctgggttcagctcgcttacggttcgc 12493  T
Q  419 tcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 474  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12492 tcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 12437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 286; Significance: 1e-160; HSPs: 2)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 19 - 419
Target Start/End: Original strand, 2747 - 3147
Alignment:
Q  19 aacctgtgtatatctacatacaactcaactac-acatatattccatatgacttactactccgagaattctaacaatccagaacatacacaattaattatg 117  Q
    |||||||||||||||||||||||||||||||  |||||| || |||||||||||||||||||  || || |||||||||||||||| ||||||| ||||     
T  2747 aacctgtgtatatctacatacaactcaactaatacatatgtttcatatgacttactactccgc-aactcaaacaatccagaacatagacaattatttata 2845  T
Q  118 attatgcgcatacatcaatttcattcaatagttatatattcacttgattcctcactcaatcatctccaaaattcactaacattaaccaattcgatcaccg 217  Q
    |||||||||||||||||| ||||||||||| |||||||||||| ||||| |  |||||||||||||||| |||||||||||| |||||||||||||||||    
T  2846 attatgcgcatacatcaaattcattcaataattatatattcacatgatttcaaactcaatcatctccaatattcactaacatcaaccaattcgatcaccg 2945  T
Q  218 gcttgttctagtatgattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaagtcccctcgtgcacgaagcaaaagt 317  Q
    ||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2946 gcttgttctagtgggattctggtacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaagtcccctcgtgcacgaagcaaaagt 3045  T
Q  318 tcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcg 417  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||| || |||||    
T  3046 tcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaagcgaccggcttacagtaggtctgggtttcgctcgctcacagttcg 3145  T
Q  418 ct 419  Q
    ||    
T  3146 ct 3147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 403 - 439
Target Start/End: Original strand, 3181 - 3217
Alignment:
Q  403 ctcgcttacggttcgctcacggttcgcttgagcgaac 439  Q
    ||||||||||||||||||||||||||||| |||||||    
T  3181 ctcgcttacggttcgctcacggttcgcttaagcgaac 3217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 251; Significance: 1e-139; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 19 - 471
Target Start/End: Original strand, 26582856 - 26583313
Alignment:
Q  19 aacctgtgtatatctacatacaactcaactac-acatatattccatatgacttactactccgagaattctaacaatccagaacatacacaattaattatg 117  Q
    ||||||||||||||||||||||||| |||||  |||||| ||  ||||||||||||||||||  || || |||||||||||||||||||||||| ||||     
T  26582856 aacctgtgtatatctacatacaacttaactattacatatgttttatatgacttactactccgc-aactcaaacaatccagaacatacacaattatttata 26582954  T
Q  118 attatgcgcatacatcaatttcattcaa-----tagttatatattcacttgattcctcactcaatcatctccaaaattcactaacattaaccaattcgat 212  Q
    |||||||||||||||||||  ||||| |     ||  |||||||||||| |||| |  |||||||||||||||| ||| |||||||  || |||||||||    
T  26582955 attatgcgcatacatcaatcacattccacatgttatgtatatattcactcgatttcatactcaatcatctccaacatttactaacaccaatcaattcgat 26583054  T
Q  213 caccggcttgttctagtatgattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaagtcccctcgtgcacgaagca 312  Q
    |||||||| |||||| || || || | |||||| || |||||||||| ||||||| |||||||| ||||||||||||||||||||||| |||||||| ||    
T  26583055 caccggctagttctaataggagtcggttacctacaccagggttatactagttaaaagaaatattatagaatgctcaagaagtcccctcctgcacgaaaca 26583154  T
Q  313 aaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacg 412  Q
    |||||||||||  |||||||||||| || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  26583155 aaagttcagaagaaggctgactaagacttacttcgcttaagcgacggctagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacg 26583254  T
Q  413 gttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcac 471  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26583255 ggtcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcac 26583313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 316 - 474
Target Start/End: Complemental strand, 5706768 - 5706610
Alignment:
Q  316 gttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtagg-tctgggttcagctcgcttacggt 414  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||| |||| ||||||||||     
T  5706768 gttcagaaa-aggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggctctgggctcagttcgcttacggg 5706670  T
Q  415 tcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 474  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  5706669 tcgctcacggttcgcttgagcgaactttggacagaatcaaaatggtttttcgctcacagg 5706610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 19 - 356
Target Start/End: Complemental strand, 23169294 - 23168954
Alignment:
Q  19 aacctgtgtatatctacatacaactcaactac-acatatattccatatgacttactactccgagaattctaacaatccagaacatacacaattaattatg 117  Q
    |||| ||||||||| ||||||||||| ||||  ||||||||| ||||| |||||||||||||  || || |||||||||| ||||||||||| | ||||     
T  23169294 aacccgtgtatatccacatacaactccactaatacatatatttcatataacttactactccgc-aactcaaacaatccagcacatacacaatcatttata 23169196  T
Q  118 attatgcgcatacatcaatttcattcaata-gttatata--ttcacttgattcctcactcaatcatctccaaaattcactaacattaaccaattcgatca 214  Q
    ||||||||||||||||| |  ||||| | | ||||||||  ||||| ||||| |  |||||| ||||||||||||||| |||||| ||||||| ||||||    
T  23169195 attatgcgcatacatcattcacattccacatgttatatacattcacatgatttcatactcaaacatctccaaaattcattaacatcaaccaatgcgatca 23169096  T
Q  215 ccggcttgttctagtatgattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaaga-agtcccctcgtgcacgaagcaa 313  Q
    || |  |||||||||| ||| || |||||||||||||||||||||||||| || |||| |||||||||| | ||| |  ||||||| || |||||| | |    
T  23169095 ccagagtgttctagtaggatcctaatacctatacaagggttatacaagttgaaagaaacattttagaatacccaaaagggtcccctagtacacgaaac-a 23168997  T
Q  314 aagttcagaaagaggctgactaaggctcacttcgcttaagcga 356  Q
    |  ||||||||||||||||||||| ||||  ||||||||||||    
T  23168996 attttcagaaagaggctgactaagcctcagctcgcttaagcga 23168954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 19 - 356
Target Start/End: Complemental strand, 23580551 - 23580211
Alignment:
Q  19 aacctgtgtatatctacatacaactcaactac-acatatattccatatgacttactactccgagaattctaacaatccagaacatacacaattaattatg 117  Q
    |||| ||||||||| ||||||||||| ||||  ||||||||| ||||| |||||||||||||  || || |||||||||| ||||||||||| | ||||     
T  23580551 aacccgtgtatatccacatacaactccactaatacatatatttcatataacttactactccgc-aactcaaacaatccagcacatacacaatcatttata 23580453  T
Q  118 attatgcgcatacatcaatttcattcaata-gttatata--ttcacttgattcctcactcaatcatctccaaaattcactaacattaaccaattcgatca 214  Q
    ||||||||||||||||| |  ||||| | | ||||||||  ||||| ||||| |  |||||| ||||||||||||||| |||||| ||||||| ||||||    
T  23580452 attatgcgcatacatcattcacattccacatgttatatacattcacatgatttcatactcaaacatctccaaaattcattaacatcaaccaatgcgatca 23580353  T
Q  215 ccggcttgttctagtatgattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaaga-agtcccctcgtgcacgaagcaa 313  Q
    || |  |||||||||| ||| || |||||||||||||||||||||||||| || |||| |||||||||| | ||| |  ||||||| || |||||| | |    
T  23580352 ccagagtgttctagtaggatcctaatacctatacaagggttatacaagttgaaagaaacattttagaatacccaaaagggtcccctagtacacgaaac-a 23580254  T
Q  314 aagttcagaaagaggctgactaaggctcacttcgcttaagcga 356  Q
    |  ||||||||||||||||||||| ||||  ||||||||||||    
T  23580253 attttcagaaagaggctgactaagcctcagctcgcttaagcga 23580211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 322 - 477
Target Start/End: Original strand, 23878326 - 23878481
Alignment:
Q  322 aaagaggctgactaaggctca-cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctc 420  Q
    |||| |||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||     
T  23878326 aaagtggctgactaagg-tcatcttcgcttaagcgacggctagttcgcttaagcgaccggcttacagtaagtctgggttctgctcgcttacggttcgctt 23878424  T
Q  421 acggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacaggttc 477  Q
     | ||||||||||||||| |  || ||||||||||| ||||  ||||||||||||||    
T  23878425 gcagttcgcttgagcgaattcttggcagaatcaaaaaggttcctcgctcacaggttc 23878481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 301 - 424
Target Start/End: Original strand, 29281353 - 29281475
Alignment:
Q  301 gtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttc 400  Q
    |||||||||||||  ||||||||| |||||||||||  |||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  29281353 gtgcacgaagcaag-gttcagaaaaaggctgactaacactcagttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggtctgggttc 29281451  T
Q  401 agctcgcttacggttcgctcacgg 424  Q
    || |||||||||| ||||||||||    
T  29281452 agttcgcttacgggtcgctcacgg 29281475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 293 - 455
Target Start/End: Complemental strand, 25181606 - 25181446
Alignment:
Q  293 gtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggt 392  Q
    ||||||| ||||||||||||| | |||||||| |||||||||||  |||| |||||||||||||||||||||| |||||| ||||| |||||||||||||    
T  25181606 gtcccctagtgcacgaagcaaga-ttcagaaa-aggctgactaacactcagttcgcttaagcgacggctagtttgcttaagcgaccagcttacagtaggt 25181509  T
Q  393 ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaa 455  Q
    |||||||||| || ||||||| |||||||||| |||||| |||||| |  || ||||||||||    
T  25181508 ctgggttcagttcacttacgggtcgctcacggctcgcttaagcgaattcttggcagaatcaaa 25181446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 317 - 455
Target Start/End: Original strand, 9949 - 10086
Alignment:
Q  317 ttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttc 416  Q
    |||||||| |||||| ||||  |||| || |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||| ||    
T  9949 ttcagaaa-aggctgtctaacactcagtttgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggtctgggttcagttcgcttacgggtc 10047  T
Q  417 gctcacggttcgcttgagcgaacttctgacagaatcaaa 455  Q
    |||||||| |||||| |||||| |  || ||||||||||    
T  10048 gctcacggctcgcttaagcgaattcttggcagaatcaaa 10086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 244 - 477
Target Start/End: Original strand, 23062983 - 23063216
Alignment:
Q  244 tatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca 342  Q
    |||| |||||||||||||||| || |||| |||||  ||||||||| | | ||||||  ||||||| ||||| ||||| |||| ||||||||||||   |    
T  23062983 tatataagggttatacaagttgaaagaaacatttttaaatgctcaaaaggatcccctaatgcacgaggcaaa-gttcaaaaagtggctgactaaggtcaa 23063081  T
Q  343 cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttc 442  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||   ||  |||||   |||||| |||  |||||  |||||||||| ||||||||||    
T  23063082 cttcgcttaagcgacggctggttcgcttaagcgaccggcttacagagagttggggtttcactcgctaacgcctcgcttgcggttcgcttaagcgaacttc 23063181  T
Q  443 tgacagaatcaaaatggtttttcgctcacaggttc 477  Q
    |||||||||  ||||| ||||||||| || |||||    
T  23063182 tgacagaatgcaaatgatttttcgcttacgggttc 23063216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 244 - 419
Target Start/End: Complemental strand, 23089779 - 23089604
Alignment:
Q  244 tatacaagggttatacaagttaaaggaaatattttagaatgctcaa-gaagtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca 342  Q
    |||| |||||||||||||||| ||||||  || ||  ||||||||| |  ||| |||  ||||||| ||||  ||||| |||| ||||||||||||   |    
T  23089779 tatataagggttatacaagttgaaggaaccatgtttcaatgctcaaaggggtctcctaatgcacgaggcaac-gttcaaaaagtggctgactaaggtcaa 23089681  T
Q  343 cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgct 419  Q
    |||||||||||||||| | ||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||    
T  23089680 cttcgcttaagcgacgtccagttcgcttaagcgaccggcttacagtaagtctgggttctgctcgcttacggttcgct 23089604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 237 - 439
Target Start/End: Original strand, 26884498 - 26884701
Alignment:
Q  237 tgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgacta 335  Q
    |||| |||||||||| |||||||||| |||| |||| |||| | ||| ||||| | | |||||| |||||||||||||  ||||||||||||||||||||    
T  26884498 tgatgcctatacaagagttatacaagctaaaagaaacatttaaaaatactcaaaagggtcccctagtgcacgaagcaag-gttcagaaagaggctgacta 26884596  T
Q  336 aggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttc-agctcgcttacggttcgctcacggttcgcttgag 434  Q
    ||||||| ||||||||||||| || ||| |||||||| ||||| ||  |||  ||||   |||||  ||||||| |||||| |||||| |||||||||||    
T  26884597 aggctcagttcgcttaagcgaagggtagctcgcttaagcgaccagcacacaaaaggttgaggttctcgctcgctcacggttagctcacagttcgcttgag 26884696  T
Q  435 cgaac 439  Q
    |||||    
T  26884697 cgaac 26884701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 244 - 419
Target Start/End: Complemental strand, 23102207 - 23102032
Alignment:
Q  244 tatacaagggttatacaagttaaaggaaatattttagaatgctcaa-gaagtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca 342  Q
    |||| |||||||||||||||| ||||||  || ||  ||||||||| |  ||| |||  ||||||| ||||  ||||| |||| ||||||||||||   |    
T  23102207 tatataagggttatacaagttgaaggaaccatgtttcaatgctcaaaggggtctcctaatgcacgaggcaac-gttcaaaaagtggctgactaaggtcaa 23102109  T
Q  343 cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgct 419  Q
    |||||||||||||||| | |||||||||||  || |||||||||||| |||||||||| ||||||||||||||||||    
T  23102108 cttcgcttaagcgacgtccagttcgcttaagtgatcggcttacagtaagtctgggttctgctcgcttacggttcgct 23102032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 313 - 419
Target Start/End: Original strand, 21907746 - 21907852
Alignment:
Q  313 aaagttcagaaagaggctgactaaggctca-cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttac 411  Q
    |||||||| |||| |||||||||||| ||| |||||||||||||| ||||||||||||||| |||||||||||||| | ||  |||||| ||||||| ||    
T  21907746 aaagttcaaaaagtggctgactaagg-tcatcttcgcttaagcgatggctagttcgcttaagcgaccggcttacagaaagttggggttccgctcgctaac 21907844  T
Q  412 ggttcgct 419  Q
    ||||||||    
T  21907845 ggttcgct 21907852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 244 - 387
Target Start/End: Original strand, 24660876 - 24661019
Alignment:
Q  244 tatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca 342  Q
    ||||||| ||||||||||||| || |||| |||||| ||||||||| | | |||||| |||||||||| |||| |||| |||| ||||||||||| |       
T  24660876 tatacaaaggttatacaagttgaaagaaacattttaaaatgctcaaaaggatcccctagtgcacgaagtaaaa-ttcaaaaagtggctgactaagacctt 24660974  T
Q  343 cttcgcttaagcgacggctagttcgcttaatcgaccggcttacag 387  Q
    ||| ||||||||||||||| | |||||||| ||||||||| ||||    
T  24660975 ctttgcttaagcgacggctggctcgcttaagcgaccggctcacag 24661019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 293 - 387
Target Start/End: Complemental strand, 27208417 - 27208324
Alignment:
Q  293 gtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacag 387  Q
    ||||||| ||||||||| |||  ||||||||| ||||||||||||||||| ||||||||||||| || ||| |||||||| ||||| ||| ||||    
T  27208417 gtcccctagtgcacgaaacaag-gttcagaaaaaggctgactaaggctcagttcgcttaagcgaagggtagctcgcttaagcgaccagctcacag 27208324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 293 - 387
Target Start/End: Complemental strand, 27210752 - 27210659
Alignment:
Q  293 gtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacag 387  Q
    ||||||| ||||||||| |||  ||||||||| ||||||||||||||||| ||||||||||||| || ||| |||||||| ||||| ||| ||||    
T  27210752 gtcccctagtgcacgaaacaag-gttcagaaaaaggctgactaaggctcagttcgcttaagcgaagggtagctcgcttaagcgaccagctcacag 27210659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 415 - 477
Target Start/End: Original strand, 23264551 - 23264613
Alignment:
Q  415 tcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacaggttc 477  Q
    ||||| ||||||||||||||||||||||||||| ||| |||||| ||||||||| || |||||    
T  23264551 tcgctaacggttcgcttgagcgaacttctgacataatgaaaatgatttttcgcttacgggttc 23264613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 51
Target Start/End: Original strand, 20261005 - 20261036
Alignment:
Q  20 acctgtgtatatctacatacaactcaactaca 51  Q
    ||||||||||||||||||||||||||||||||    
T  20261005 acctgtgtatatctacatacaactcaactaca 20261036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 19 - 47
Target Start/End: Original strand, 200822 - 200850
Alignment:
Q  19 aacctgtgtatatctacatacaactcaac 47  Q
    |||||||||||||||||||||||||||||    
T  200822 aacctgtgtatatctacatacaactcaac 200850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 19 - 47
Target Start/End: Complemental strand, 6744320 - 6744292
Alignment:
Q  19 aacctgtgtatatctacatacaactcaac 47  Q
    |||||||||||||||||||||||||||||    
T  6744320 aacctgtgtatatctacatacaactcaac 6744292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 19 - 47
Target Start/End: Complemental strand, 27367579 - 27367551
Alignment:
Q  19 aacctgtgtatatctacatacaactcaac 47  Q
    |||||||||||||||||||||||||||||    
T  27367579 aacctgtgtatatctacatacaactcaac 27367551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 228; Significance: 1e-125; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 19 - 471
Target Start/End: Complemental strand, 29615195 - 29614738
Alignment:
Q  19 aacctgtgtatatctacatacaactcaactac-acatatattccatatgacttactactccgagaattctaacaatccagaacatacacaattaattatg 117  Q
    |||||||||||||||||||||||||| ||||  |||||| || ||||||||||||| |||||  || || |||||||||||||||||||||||| ||||     
T  29615195 aacctgtgtatatctacatacaactcgactattacatatgtttcatatgacttactgctccgc-aactc-aacaatccagaacatacacaattatttata 29615098  T
Q  118 attatgcgcatacatcaatttcattcaata-gttatatat--------tcacttgattcctcactcaatcatctccaaaattcactaacattaaccaatt 208  Q
    ||||| | |||||||||||  ||||| | | |||||||||        ||||||| || |  |||||||||||||||| ||| |||||||  || |||||    
T  29615097 attattcacatacatcaatcacattccacatgttatatatacacatattcacttgttttcatactcaatcatctccaacatttactaacaccaatcaatt 29614998  T
Q  209 cgatcaccggcttgttctagtatgattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaagtcccctcgtgcacga 308  Q
    | |||||||||| |||||| || ||||||| ||||||| | |||||||||| |||||||||||||||| ||||||||||||||||| ||||| |||||||    
T  29614997 caatcaccggctcgttctaataagattctgttacctatgccagggttatactagttaaaggaaatattatagaatgctcaagaagttccctcatgcacga 29614898  T
Q  309 agcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgct 408  Q
    | |||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  29614897 aacaaaagttcagaa---ggctgactaaggctcacttcgcttaagcgacggctagttcgcttaagcgaccgacttacagtaggtctgggttcagctcgct 29614801  T
Q  409 tacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcac 471  Q
    ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29614800 tacgggttgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcac 29614738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 279 - 474
Target Start/End: Original strand, 12167637 - 12167832
Alignment:
Q  279 agaatgctcaagaagtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgacc 378  Q
    |||| ||||||||||||||||| ||||| |||||| |||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||| |||||    
T  12167637 agaacgctcaagaagtcccctcatgcactaagcaacagttcagaaa-aggctgattaaggttcacttcgcttaagcgacggctagttcgcttaagcgacc 12167735  T
Q  379 ggcttacagtaggt-ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 474  Q
     ||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||    
T  12167736 agcttacagtaggttctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatgaaaatggtttttcgctcacagg 12167832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 279 - 474
Target Start/End: Original strand, 19286546 - 19286741
Alignment:
Q  279 agaatgctcaagaagtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgacc 378  Q
    |||| ||||||||||||||||| ||||| |||||| |||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||| |||||    
T  19286546 agaacgctcaagaagtcccctcatgcactaagcaacagttcagaaa-aggctgattaaggttcacttcgcttaagcgacggctagttcgcttaagcgacc 19286644  T
Q  379 ggcttacagtaggt-ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 474  Q
     ||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||    
T  19286645 agcttacagtaggttctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatgaaaatggtttttcgctcacagg 19286741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 279 - 472
Target Start/End: Original strand, 19877730 - 19877923
Alignment:
Q  279 agaatgctcaagaagtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgacc 378  Q
    |||| ||||||||||||||||| ||||| |||||| |||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||| |||||    
T  19877730 agaacgctcaagaagtcccctcatgcactaagcaacagttcagaaa-aggctgattaaggttcacttcgcttaagcgacggctagttcgcttaagcgacc 19877828  T
Q  379 ggcttacagtaggt-ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcaca 472  Q
     ||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||    
T  19877829 agcttacagtaggttctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatgaaaatggtttttcgctcaca 19877923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 279 - 474
Target Start/End: Original strand, 19883506 - 19883701
Alignment:
Q  279 agaatgctcaagaagtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgacc 378  Q
    |||| ||||||||||||||||| ||||| |||||| |||||||||| ||||| | ||||| ||||||||||||||||||||||||||||||||| |||||    
T  19883506 agaacgctcaagaagtcccctcatgcactaagcaacagttcagaaa-aggctaattaaggttcacttcgcttaagcgacggctagttcgcttaagcgacc 19883604  T
Q  379 ggcttacagtaggt-ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 474  Q
     ||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||    
T  19883605 agcttacagtaggttctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatgaaaatggtttttcgctcacagg 19883701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 279 - 474
Target Start/End: Complemental strand, 19786650 - 19786455
Alignment:
Q  279 agaatgctcaagaagtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgacc 378  Q
    |||| ||||||||||||||||| ||||  |||||| |||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||| |||||    
T  19786650 agaacgctcaagaagtcccctcatgcattaagcaacagttcagaaa-aggctgattaaggttcacttcgcttaagcgacggctagttcgcttaagcgacc 19786552  T
Q  379 ggcttacagtaggt-ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 474  Q
     ||||||||||||| |||||||||  |||||||||| |||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||    
T  19786551 agcttacagtaggttctgggttcacttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatgaaaatggtttttcgctcacagg 19786455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 316 - 474
Target Start/End: Complemental strand, 34640733 - 34640575
Alignment:
Q  316 gttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtagg-tctgggttcagctcgcttacggt 414  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||| |||| ||||||||||     
T  34640733 gttcagaaa-aggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggctctgggctcagttcgcttacggg 34640635  T
Q  415 tcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 474  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  34640634 tcgctcacggttcgcttgagcgaactttggacagaatcaaaatggtttttcgctcacagg 34640575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 316 - 474
Target Start/End: Complemental strand, 34647407 - 34647249
Alignment:
Q  316 gttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtagg-tctgggttcagctcgcttacggt 414  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||| |||| ||||||||||     
T  34647407 gttcagaaa-aggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggctctgggctcagttcgcttacggg 34647309  T
Q  415 tcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 474  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  34647308 tcgctcacggttcgcttgagcgaactttggacagaatcaaaatggtttttcgctcacagg 34647249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 314 - 474
Target Start/End: Complemental strand, 25470451 - 25470290
Alignment:
Q  314 aagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggt-ctgggttcagctcgcttacg 412  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||| |||||  |||||||||||| ||||| |||| |||||||||    
T  25470451 aagttcagaaaaaggctgactaaggttcacttcgcttaagcgacgtctagttcgcttaagcgaccaacttacagtaggttctgggctcagttcgcttacg 25470352  T
Q  413 gttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 474  Q
    | |||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||    
T  25470351 ggtcgctcacggttcgcttgagcgaattttggacagaatcaaaatggtttttcgctcacagg 25470290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 339 - 472
Target Start/End: Complemental strand, 21365200 - 21365067
Alignment:
Q  339 ctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaa 438  Q
    |||| |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  21365200 ctcagttcgcttaagcgacggctagctcgcttaagcgaccaacttacagtaggtctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaa 21365101  T
Q  439 cttctgacagaatcaaaatggtttttcgctcaca 472  Q
    |||  |||||||||||||||||||||||||||||    
T  21365100 ctttggacagaatcaaaatggtttttcgctcaca 21365067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 339 - 472
Target Start/End: Complemental strand, 23969182 - 23969049
Alignment:
Q  339 ctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaa 438  Q
    |||| |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  23969182 ctcagttcgcttaagcgacggctagctcgcttaagcgaccaacttacagtaggtctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaa 23969083  T
Q  439 cttctgacagaatcaaaatggtttttcgctcaca 472  Q
    |||  |||||||||||||||||||||||||||||    
T  23969082 ctttggacagaatcaaaatggtttttcgctcaca 23969049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 313 - 419
Target Start/End: Original strand, 18799818 - 18799924
Alignment:
Q  313 aaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacg 412  Q
    |||||||| |||| |||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||    
T  18799818 aaagttcaaaaagtggctgactaaggttgacttcgcttaagcgacggctagttcgcttaagcgaccggcttacagtaagtctgggttccgctcgcttacg 18799917  T
Q  413 gttcgct 419  Q
    |||||||    
T  18799918 gttcgct 18799924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 317 - 455
Target Start/End: Complemental strand, 20008630 - 20008493
Alignment:
Q  317 ttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttc 416  Q
    |||||||| |||||| ||||  |||| ||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||| ||    
T  20008630 ttcagaaa-aggctgtctaacactcagttcgcttaagcaacggctagttcgcttaagcgaccagcttacagtaggtctgggttcagttcgcttacgggtc 20008532  T
Q  417 gctcacggttcgcttgagcgaacttctgacagaatcaaa 455  Q
    |||||||| |||||| |||||| |  || ||||||||||    
T  20008531 gctcacggctcgcttaagcgaattcttggcagaatcaaa 20008493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 150 - 419
Target Start/End: Original strand, 25396390 - 25396658
Alignment:
Q  150 tatatattcacttgattcctcactcaatcatctccaaaattcactaacattaaccaattcgatcaccggcttgttctagtatgattctgatacctataca 249  Q
    |||||||||||||| || |  |||||||||| |||||||||||||||  | |||||||||||| |||    ||||  |||| ||||| | | | ||||||    
T  25396390 tatatattcacttggtttcatactcaatcatatccaaaattcactaaattcaaccaattcgattaccaatgtgtttcagtaggattcag-tgcatataca 25396488  T
Q  250 agggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgc 348  Q
    ||||||||||||||| || |||| |||||||||||||||| | | | |||| |||||| ||||| || |||| |||| || |||||||| |  |||||||    
T  25396489 agggttatacaagttgaaagaaacattttagaatgctcaaaaggattccctagtgcactaagcataa-ttcaaaaagtggttgactaagacctacttcgc 25396587  T
Q  349 ttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgct 419  Q
    ||||||||||||| | |||||||| |||||| |||||||   ||  |||||| ||||||| ||||||||||    
T  25396588 ttaagcgacggctggctcgcttaagcgaccgacttacagagagttggggttccgctcgctaacggttcgct 25396658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 244 - 419
Target Start/End: Complemental strand, 21565936 - 21565761
Alignment:
Q  244 tatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca 342  Q
    |||| |||||||||||||||| ||||||  || ||  ||||||||| | | || |||  ||||||| ||||  ||||| |||| ||||||||||||   |    
T  21565936 tatataagggttatacaagttgaaggaaccatgtttcaatgctcaaaagggtctcctaatgcacgaggcaac-gttcaaaaagtggctgactaaggtcaa 21565838  T
Q  343 cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgct 419  Q
    |||||||||||||||| | ||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||    
T  21565837 cttcgcttaagcgacgtccagttcgcttaagcgaccggcttacagtaagtctgggttctgctcgcttacggttcgct 21565761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 252 - 444
Target Start/End: Complemental strand, 19472082 - 19471891
Alignment:
Q  252 ggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgctt 350  Q
    ||||||||||||| ||||||| |||| | ||||||||| | | |||||| ||||||||||||||| |||| |||| ||||||| ||| |   ||||||||    
T  19472082 ggttatacaagttgaaggaaacatttcaaaatgctcaaaaggatcccctagtgcacgaagcaaaa-ttcaaaaagtggctgac-aagaccttcttcgctt 19471985  T
Q  351 aagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctg 444  Q
    |||||| |||| | |||||||| ||||||||| |||| | ||  |||||| ||||||| |||| |||||  |||||||||| ||||||||||||    
T  19471984 aagcgatggctggctcgcttaagcgaccggctcacagaaagttggggttccgctcgctaacggctcgcttgcggttcgcttaagcgaacttctg 19471891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 237 - 378
Target Start/End: Complemental strand, 19300500 - 19300359
Alignment:
Q  237 tgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgacta 335  Q
    |||| ||||||||||||||||||||| |||| |||| | || | ||| ||||| | | |||||| |||||||||||||| ||||||| ||||||||||||    
T  19300500 tgatgcctatacaagggttatacaagctaaaagaaacacttaaaaatactcaaaagggtcccctagtgcacgaagcaaa-gttcagatagaggctgacta 19300402  T
Q  336 aggctcacttcgcttaagcgacggctagttcgcttaatcgacc 378  Q
    |||||||  |||||||||||| || ||| |||||||| |||||    
T  19300401 aggctcatctcgcttaagcgaagggtagctcgcttaagcgacc 19300359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 20 - 136
Target Start/End: Complemental strand, 19786866 - 19786751
Alignment:
Q  20 acctgtgtatatctacatacaactcaactac-acatatattccatatgacttactactccgagaattctaacaatccagaacatacacaattaattatga 118  Q
    ||||||||||||||||||||||||| ||||| |||||| |  |||||||||||||||||| | || || |||||||||| || |||||||||| |||| |    
T  19786866 acctgtgtatatctacatacaactcgactactacatatgtatcatatgacttactactcc-ataactcaaacaatccag-acttacacaattatttataa 19786769  T
Q  119 ttatgcgcatacatcaat 136  Q
    |||||| |||||||||||    
T  19786768 ttatgcacatacatcaat 19786751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 20 - 136
Target Start/End: Original strand, 12167420 - 12167535
Alignment:
Q  20 acctgtgtatatctacatacaactcaactac-acatatattccatatgacttactactccgagaattctaacaatccagaacatacacaattaattatga 118  Q
    ||||||||||||||||||||||||| || || |||||| |  |||||||||||||||||| | || || |||||||||| || |||||||||| |||| |    
T  12167420 acctgtgtatatctacatacaactcgaccactacatatgtatcatatgacttactactcc-acaactcaaacaatccag-acttacacaattatttataa 12167517  T
Q  119 ttatgcgcatacatcaat 136  Q
    |||||| |||||||||||    
T  12167518 ttatgcacatacatcaat 12167535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 20 - 136
Target Start/End: Original strand, 19877513 - 19877628
Alignment:
Q  20 acctgtgtatatctacatacaactcaactac-acatatattccatatgacttactactccgagaattctaacaatccagaacatacacaattaattatga 118  Q
    ||||||||||||||||||||||||| || || |||||| |  |||||||||||||||||| | || || |||||||||| || |||||||||| |||| |    
T  19877513 acctgtgtatatctacatacaactcgaccactacatatgtatcatatgacttactactcc-acaactcaaacaatccag-acttacacaattatttataa 19877610  T
Q  119 ttatgcgcatacatcaat 136  Q
    |||||| |||||||||||    
T  19877611 ttatgcacatacatcaat 19877628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 20 - 136
Target Start/End: Original strand, 19883289 - 19883404
Alignment:
Q  20 acctgtgtatatctacatacaactcaactac-acatatattccatatgacttactactccgagaattctaacaatccagaacatacacaattaattatga 118  Q
    ||||||||||||||||||||||||| || || |||||| |  |||||||||||||||||| | || || |||||||||| || |||||||||| |||| |    
T  19883289 acctgtgtatatctacatacaactcgaccactacatatgtatcatatgacttactactcc-acaactcaaacaatccag-acttacacaattatttataa 19883386  T
Q  119 ttatgcgcatacatcaat 136  Q
    |||||| |||||||||||    
T  19883387 ttatgcacatacatcaat 19883404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 136
Target Start/End: Original strand, 19286329 - 19286444
Alignment:
Q  20 acctgtgtatatctacatacaactcaactac-acatatattccatatgacttactactccgagaattctaacaatccagaacatacacaattaattatga 118  Q
    ||||||||||||||||||||||||| || || |||||| |   ||||||||||||||||| | || || |||||||||| || |||||||||| |||| |    
T  19286329 acctgtgtatatctacatacaactcgaccactacatatgtataatatgacttactactcc-acaactcaaacaatccag-acttacacaattatttataa 19286426  T
Q  119 ttatgcgcatacatcaat 136  Q
    |||||| |||||||||||    
T  19286427 ttatgcacatacatcaat 19286444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 415 - 474
Target Start/End: Complemental strand, 24513429 - 24513370
Alignment:
Q  415 tcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 474  Q
    ||||| ||||||||||||||||||||||||  ||||| |||||| ||||||||| |||||    
T  24513429 tcgctaacggttcgcttgagcgaacttctggaagaatgaaaatgatttttcgcttacagg 24513370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 301 - 439
Target Start/End: Original strand, 29097221 - 29097359
Alignment:
Q  301 gtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttc 400  Q
    ||||||||||||||| ||||||||  ||||||||||  |||| |||||||||||||||  ||| |||||||| ||||| ||| |||  ||||   ||| |    
T  29097221 gtgcacgaagcaaaa-ttcagaaaagggctgactaacactcagttcgcttaagcgacgagtagctcgcttaagcgaccagctcacacaaggttgaggtcc 29097319  T
Q  401 -agctcgcttacggttcgctcacggttcgcttgagcgaac 439  Q
      ||||||| ||||||||||| | |||||||| |||||||    
T  29097320 tcgctcgctcacggttcgctcgcagttcgcttaagcgaac 29097359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 301 - 378
Target Start/End: Complemental strand, 9099770 - 9099694
Alignment:
Q  301 gtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgacc 378  Q
    ||||||||||||||| ||||||||  ||||||||||  |||| |||||||||||||||  ||| |||||||| |||||    
T  9099770 gtgcacgaagcaaaa-ttcagaaaagggctgactaacactcagttcgcttaagcgacgagtagctcgcttaagcgacc 9099694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 293 - 378
Target Start/End: Complemental strand, 11289378 - 11289294
Alignment:
Q  293 gtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgacc 378  Q
    ||||||| |||||||| ||||| |||||||||| ||||| ||||||||||  |||||||||||| || ||| | |||||| |||||    
T  11289378 gtcccctagtgcacgaggcaaa-gttcagaaaggggctggctaaggctcagctcgcttaagcgaagggtagcttgcttaagcgacc 11289294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 51
Target Start/End: Original strand, 12941981 - 12942012
Alignment:
Q  20 acctgtgtatatctacatacaactcaactaca 51  Q
    ||||||||||||||||||||||||||||||||    
T  12941981 acctgtgtatatctacatacaactcaactaca 12942012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 439
Target Start/End: Original strand, 31251879 - 31251916
Alignment:
Q  402 gctcgcttacggttcgctcacggttcgcttgagcgaac 439  Q
    ||||||| ||||||||||||| ||||||||||||||||    
T  31251879 gctcgctcacggttcgctcacagttcgcttgagcgaac 31251916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 294 - 357
Target Start/End: Original strand, 9186841 - 9186903
Alignment:
Q  294 tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca-cttcgcttaagcgac 357  Q
    |||||| |||||||||||||| ||||| |||| |||||||||||| ||| |||||||||||||||    
T  9186841 tcccctagtgcacgaagcaaa-gttcaaaaagtggctgactaagg-tcatcttcgcttaagcgac 9186903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 19 - 47
Target Start/End: Original strand, 24562463 - 24562491
Alignment:
Q  19 aacctgtgtatatctacatacaactcaac 47  Q
    |||||||||||||||||||||||||||||    
T  24562463 aacctgtgtatatctacatacaactcaac 24562491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 220; Significance: 1e-121; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 20 - 471
Target Start/End: Complemental strand, 41456142 - 41455687
Alignment:
Q  20 acctgtgtatatctacatacaactcaactaca-catatattccatatgacttactactccgagaattctaacaatccagaacatacacaattaattatga 118  Q
    ||||||||||||||||||||||||||||||   ||||| || |||||||||||||||||||  || || |||||| |||||||| |||||||| |||| |    
T  41456142 acctgtgtatatctacatacaactcaactaatgcatatgtttcatatgacttactactccgt-aactcaaacaattcagaacattcacaattatttataa 41456044  T
Q  119 ttatgcgcatacatcaatttcattcaatagttatatattcacttgat--tcctcactcaatcatctccaaaattcactaacattaaccaattcgatcacc 216  Q
    |||||||| ||||||||||||||||||||||| ||||||||||| ||  |||| ||||||| |||||||| ||| |||||||  || |||||||||  ||    
T  41456043 ttatgcgcttacatcaatttcattcaatagttgtatattcacttaatcttcct-actcaattatctccaacatttactaacaccaatcaattcgattgcc 41455945  T
Q  217 ggcttgttctagtatgattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaagtcccctcgtgcacgaagcaaaag 316  Q
     ||||||||||||| ||||||||||||||||| ||| |||||||||||||||   |  ||  |||| ||||| ||||||||||| ||||| |||||| ||    
T  41455944 agcttgttctagtaggattctgatacctatactaggattatacaagttaaagaggaagttaaagaacgctcaggaagtcccctcatgcactaagcaacag 41455845  T
Q  317 ttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtagg-tctgggttcagctcgcttacggtt 415  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||| |||||||||| |    
T  41455844 ttcagaaaaaggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggttctgggttcagttcgcttacgggt 41455745  T
Q  416 cgctcacggttcgcttgagcgaacttctgacagaatcaaaa--tggtttttcgctcac 471  Q
    ||||||||||||||||||||||||||  |||||||||||||  |||||||||||||||    
T  41455744 cgctcacggttcgcttgagcgaactttggacagaatcaaaaattggtttttcgctcac 41455687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 23 - 477
Target Start/End: Original strand, 18914193 - 18914646
Alignment:
Q  23 tgtgtatatctacatacaactcaactacacatatattccatatgacttactactccgagaattctaacaatccagaacatacacaattaattatgattat 122  Q
    ||||||||||||||||||||| ||| | |||||| || |||||||||||| ||||||  ||||| ||||||||||||||||||||||||||||| |||||    
T  18914193 tgtgtatatctacatacaacttaacaatacatatgtttcatatgacttacaactccgc-aattccaacaatccagaacatacacaattaattataattat 18914291  T
Q  123 gcgcatacatcaatttcattcaata-gttatatattcacttgattcctcactcaatcatctccaaaattcactaacattaaccaattcgatcaccggctt 221  Q
    || |||||||||||||||||||| |   ||||||||||||||||| |  ||||||||||||||||||||||||||||| ||| ||||| ||||   |  |    
T  18914292 gctcatacatcaatttcattcaacataatatatattcacttgatttcatactcaatcatctccaaaattcactaacatcaactaattccatcaatagagt 18914391  T
Q  222 gttctagtatgattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttca 320  Q
    ||| ||||| |||| || |   |||| || |||||||||||||  | |||||||| |   |||||||| | | ||||||  ||||||| |||||| ||||    
T  18914392 gttttagtaggattatg-tgtatatataaaggttatacaagttggaagaaatattattatatgctcaaaaggatcccctaatgcacgaggcaaaaattca 18914490  T
Q  321 gaaagaggctgactaaggctca-cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgct 419  Q
     |||| |||||||||||| ||| |||||||||||||| |||  |||||||||| ||||||||||| ||   ||  |||||| ||||||| | ||||||||    
T  18914491 -aaagtggctgactaagg-tcatcttcgcttaagcgatggcaggttcgcttaagcgaccggcttatagagagttggggttccgctcgctaaaggttcgct 18914588  T
Q  420 cacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacaggttc 477  Q
      |||||| ||| |||||||||||| ||||||  || || ||||||||| || |||||    
T  18914589 tgcggttcacttaagcgaacttctggcagaatggaattgatttttcgcttacgggttc 18914646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 327 - 471
Target Start/End: Original strand, 24192274 - 24192418
Alignment:
Q  327 ggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggtt 426  Q
    ||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||| ||||||||||||||||||||    
T  24192274 ggctgactaaggtccacttcgcttaagcgacggctagttcgcttaagcgaccggcttacagtaagtctgggttcaactcacttacggttcgctcacggtt 24192373  T
Q  427 cgcttgagcgaacttctgacagaatcaaaatggtttttcgctcac 471  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  24192374 cgcttgagcgaacttctgacagaatcaaaatggtttttcgctcac 24192418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 301 - 438
Target Start/End: Original strand, 14865201 - 14865338
Alignment:
Q  301 gtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcga-cggctagttcgcttaatcgaccggcttacagtaggtctgggtt 399  Q
    |||||||||||||  ||||||||| |||||||||||  |||| ||||||||||||| |||||||||||||||| ||||| ||||| ||||||||||||||    
T  14865201 gtgcacgaagcaag-gttcagaaaaaggctgactaacactcagttcgcttaagcgaacggctagttcgcttaagcgaccagcttagagtaggtctgggtt 14865299  T
Q  400 cagctcgcttacggttcgctcacggttcgcttgagcgaa 438  Q
    ||| |||||||||| |||||||||| |||||| ||||||    
T  14865300 cagttcgcttacgggtcgctcacggctcgcttaagcgaa 14865338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 313 - 419
Target Start/End: Complemental strand, 16802143 - 16802037
Alignment:
Q  313 aaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacg 412  Q
    |||||||| |||| |||| |||||||   ||||||||||| |||||||||| |||||||| |||||||||||||||| |||||||||| |||||||||||    
T  16802143 aaagttcaaaaagtggctaactaaggtcaacttcgcttaaacgacggctagctcgcttaagcgaccggcttacagtaagtctgggttctgctcgcttacg 16802044  T
Q  413 gttcgct 419  Q
    |||||||    
T  16802043 gttcgct 16802037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 316 - 417
Target Start/End: Complemental strand, 55499799 - 55499698
Alignment:
Q  316 gttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggtt 415  Q
    ||||| |||| |||||||||||    ||||||||||||||||| ||||||||||||| |||||||||||||||| |||| ||||| ||||||||||||||    
T  55499799 gttcaaaaagtggctgactaagatcaacttcgcttaagcgacgtctagttcgcttaagcgaccggcttacagtaagtctaggttctgctcgcttacggtt 55499700  T
Q  416 cg 417  Q
    ||    
T  55499699 cg 55499698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 240 - 413
Target Start/End: Complemental strand, 13324549 - 13324376
Alignment:
Q  240 tacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaagg 338  Q
    ||||||||||||||||||| ||| | || |||| || || |||||||||| | | ||||||  |||||||||||||| ||||||||| ||||||||||||    
T  13324549 tacctatacaagggttatataagctgaaagaaacatctttgaatgctcaaaagggtcccctaatgcacgaagcaaaa-ttcagaaagtggctgactaagg 13324451  T
Q  339 ctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacgg 413  Q
    ||||  |||||||||||| |||| | |||||||| |||| ||||| ||| | || ||||||  ||||||| ||||    
T  13324450 ctcagctcgcttaagcgaaggctggctcgcttaagcgactggcttgcagaaagtttgggttttgctcgctgacgg 13324376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 88 - 145
Target Start/End: Complemental strand, 18136174 - 18136117
Alignment:
Q  88 aacaatccagaacatacacaattaattatgattatgcgcatacatcaatttcattcaa 145  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  18136174 aacaatccagaacatacacaattaattataattatgctcatacatcaatttcattcaa 18136117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 361 - 477
Target Start/End: Complemental strand, 17241201 - 17241085
Alignment:
Q  361 tagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggt 460  Q
    |||||||||||| |||||| |||| ||   ||  |||||| ||||||| ||||||||||  |||||||||||||||||||||||||||||| ||| || |    
T  17241201 tagttcgcttaagcgaccgacttatagagagttggggttccgctcgctgacggttcgcttgcggttcgcttgagcgaacttctgacagaatgaaattgat 17241102  T
Q  461 ttttcgctcacaggttc 477  Q
    |||||||| || |||||    
T  17241101 ttttcgcttacgggttc 17241085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 240 - 357
Target Start/End: Complemental strand, 13302961 - 13302844
Alignment:
Q  240 tacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaagg 338  Q
    ||||||||||||||||||| ||| | || |||| || || |||||||||| | | ||||||  |||||||||||||| ||||||||| ||||||||||||    
T  13302961 tacctatacaagggttatataagctgaaagaaacatctttgaatgctcaaaagggtcccctaatgcacgaagcaaaa-ttcagaaagtggctgactaagg 13302863  T
Q  339 ctcacttcgcttaagcgac 357  Q
    ||||  |||||||||||||    
T  13302862 ctcagctcgcttaagcgac 13302844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 295 - 473
Target Start/End: Complemental strand, 10415301 - 10415123
Alignment:
Q  295 cccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtagg-tc 393  Q
    ||||| ||||||||||||||| |||||||| ||| | |||||| | || ||||||||||||| ||  || |||||||| ||||| ||| |||| |   ||    
T  10415301 cccctagtgcacgaagcaaaa-ttcagaaa-aggttaactaagacccagttcgcttaagcgaagggcagctcgcttaagcgaccagct-acaggaaaatc 10415205  T
Q  394 tgggttcagct-cgcttacggttcgctcacg-gttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacag 473  Q
    | ||||||| | |||| |||||||||||||  ||||||||||||||| ||  ||||||||||||||||||||||||||||||    
T  10415204 taggttcaggttcgctcacggttcgctcacaagttcgcttgagcgaaatttggacagaatcaaaatggtttttcgctcacag 10415123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 295 - 473
Target Start/End: Complemental strand, 10421971 - 10421793
Alignment:
Q  295 cccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtagg-tc 393  Q
    ||||| ||||||||||||||| |||||||| ||| | |||||| | || ||||||||||||| ||  || |||||||| ||||| ||| |||| |   ||    
T  10421971 cccctagtgcacgaagcaaaa-ttcagaaa-aggttaactaagacccagttcgcttaagcgaagggcagctcgcttaagcgaccagct-acaggaaaatc 10421875  T
Q  394 tgggttcagct-cgcttacggttcgctcacg-gttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacag 473  Q
    | ||||||| | |||| |||||||||||||  ||||||||||||||| ||  ||||||||||||||||||||||||||||||    
T  10421874 taggttcaggttcgctcacggttcgctcacaagttcgcttgagcgaaatttggacagaatcaaaatggtttttcgctcacag 10421793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 362 - 455
Target Start/End: Original strand, 17131147 - 17131240
Alignment:
Q  362 agttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaa 455  Q
    |||||||||||  |||| ||||||||||||||||||||||| |||||||||| ||||||| || |||||| |||||| |  || ||||||||||    
T  17131147 agttcgcttaagtgaccagcttacagtaggtctgggttcagttcgcttacgggtcgctcatggctcgcttaagcgaattcttggcagaatcaaa 17131240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 404 - 473
Target Start/End: Complemental strand, 10390104 - 10390034
Alignment:
Q  404 tcgcttacggttcgctcacg-gttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacag 473  Q
    ||||| |||||||||||||  ||||||||||||||| ||  ||||||||||||||||||||||||||||||    
T  10390104 tcgctcacggttcgctcacaagttcgcttgagcgaaatttggacagaatcaaaatggtttttcgctcacag 10390034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 240 - 357
Target Start/End: Complemental strand, 13313637 - 13313520
Alignment:
Q  240 tacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaagg 338  Q
    ||||||||||||||||||| ||| | || |||| || ||  ||||||||| | | ||||||  |||||||||||||| ||||||||| ||||||||||||    
T  13313637 tacctatacaagggttatataagctgaaagaaacatctttaaatgctcaaaagggtcccctaatgcacgaagcaaaa-ttcagaaagtggctgactaagg 13313539  T
Q  339 ctcacttcgcttaagcgac 357  Q
    ||||  |||||||||||||    
T  13313538 ctcagctcgcttaagcgac 13313520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 362 - 419
Target Start/End: Complemental strand, 12034072 - 12034015
Alignment:
Q  362 agttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgct 419  Q
    ||||||||||| ||||| |||||||||||||||||||| || |||||||||| |||||    
T  12034072 agttcgcttaagcgaccagcttacagtaggtctgggtttagttcgcttacgggtcgct 12034015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 301 - 439
Target Start/End: Complemental strand, 19235767 - 19235629
Alignment:
Q  301 gtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttc 400  Q
    ||||||||||||||| ||||||||  ||||||||||  |||| |||||||||||||||  ||| |||||||| ||||| ||| |||  ||||   ||| |    
T  19235767 gtgcacgaagcaaaa-ttcagaaaagggctgactaacactcagttcgcttaagcgacgagtagctcgcttaagcgaccagctcacacaaggttgaggtcc 19235669  T
Q  401 -agctcgcttacggttcgctcacggttcgcttgagcgaac 439  Q
      ||||||| ||||||||||| | |||||||| |||||||    
T  19235668 tcgctcgctcacggttcgctcgcagttcgcttaagcgaac 19235629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 88 - 141
Target Start/End: Complemental strand, 18129660 - 18129607
Alignment:
Q  88 aacaatccagaacatacacaattaattatgattatgcgcatacatcaatttcat 141  Q
    |||||| |||||||| ||||||||||||| ||||||| | ||||||||||||||    
T  18129660 aacaattcagaacattcacaattaattataattatgctcgtacatcaatttcat 18129607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 51
Target Start/End: Original strand, 12304930 - 12304961
Alignment:
Q  20 acctgtgtatatctacatacaactcaactaca 51  Q
    ||||||||||||||||||||||||||||||||    
T  12304930 acctgtgtatatctacatacaactcaactaca 12304961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 293 - 357
Target Start/End: Complemental strand, 12034119 - 12034057
Alignment:
Q  293 gtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgac 357  Q
    ||||||| |||||||||||||  |||||||||  |||||||||| ||||| ||||||||||||||    
T  12034119 gtcccctagtgcacgaagcaag-gttcagaaat-ggctgactaacgctcagttcgcttaagcgac 12034057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 19 - 47
Target Start/End: Complemental strand, 13968829 - 13968801
Alignment:
Q  19 aacctgtgtatatctacatacaactcaac 47  Q
    |||||||||||||||||||||||||||||    
T  13968829 aacctgtgtatatctacatacaactcaac 13968801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 19 - 47
Target Start/End: Complemental strand, 13974304 - 13974276
Alignment:
Q  19 aacctgtgtatatctacatacaactcaac 47  Q
    |||||||||||||||||||||||||||||    
T  13974304 aacctgtgtatatctacatacaactcaac 13974276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 19 - 47
Target Start/End: Original strand, 14084712 - 14084740
Alignment:
Q  19 aacctgtgtatatctacatacaactcaac 47  Q
    |||||||||||||||||||||||||||||    
T  14084712 aacctgtgtatatctacatacaactcaac 14084740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 19 - 47
Target Start/End: Original strand, 14090113 - 14090141
Alignment:
Q  19 aacctgtgtatatctacatacaactcaac 47  Q
    |||||||||||||||||||||||||||||    
T  14090113 aacctgtgtatatctacatacaactcaac 14090141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 19 - 47
Target Start/End: Complemental strand, 24123199 - 24123171
Alignment:
Q  19 aacctgtgtatatctacatacaactcaac 47  Q
    |||||||||||||||||||||||||||||    
T  24123199 aacctgtgtatatctacatacaactcaac 24123171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 19 - 47
Target Start/End: Original strand, 49399654 - 49399682
Alignment:
Q  19 aacctgtgtatatctacatacaactcaac 47  Q
    |||||||||||||||||||||||||||||    
T  49399654 aacctgtgtatatctacatacaactcaac 49399682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 163; Significance: 9e-87; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 163; E-Value: 9e-87
Query Start/End: Original strand, 216 - 471
Target Start/End: Original strand, 13742921 - 13743174
Alignment:
Q  216 cggcttgttctagtatgattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaagtcccctcgtgcacgaagcaaaa 315  Q
    ||||| |||||| || ||||| | |||||| || |||||||||| ||||||| |||||||| ||||||||||||||||||||||| |||||||| |||||    
T  13742921 cggctcgttctaataggattcggttacctacaccagggttatactagttaaaagaaatattatagaatgctcaagaagtcccctcatgcacgaaacaaaa 13743020  T
Q  316 gttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggtt 415  Q
    ||||||||   |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |    
T  13743021 gttcagaa---ggctgactaaggctcacttcgcttaagcgacggctagttcgcttaagcgaccggcttatagtaggtctgggttcagctcgcttacgggt 13743117  T
Q  416 cgctcacggttcgcttgagcgaacttctgacagaatc-aaaatggtttttcgctcac 471  Q
    ||||||||||||||||||||||||||  ||||||||| ||||| |||||||||||||    
T  13743118 cgctcacggttcgcttgagcgaactttggacagaatcaaaaattgtttttcgctcac 13743174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 19 - 471
Target Start/End: Complemental strand, 13123967 - 13123506
Alignment:
Q  19 aacctgtgtatatctacatacaactcaactac-acatatattccatatgacttactactccgagaattctaacaatccagaacatacacaattaattatg 117  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||| | || || | |||| ||||||||||||||||| ||||     
T  13123967 aacctgtgtatatctacatacaactcaactactacatatatttcatatgacttaatactcc-acaactcga-caattcagaacatacacaattatttata 13123870  T
Q  118 attatgcgcatacatcaatttcattcaata-gttata----------tattcacttgattcctcactcaatcatctccaaaattcactaacattaaccaa 206  Q
    ||||||| |||||||||||  |||||   | ||||||          |||||||||  || |  || |||||| | |||| ||| ||||| |  || |||    
T  13123869 attatgcacatacatcaatcacattcctcatgttatacatatatacgtattcacttatttacatacacaatcaacaccaacatttactaataccaatcaa 13123770  T
Q  207 ttcgatcaccggcttgttctagtatgattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaagtcccctcgtgcac 306  Q
    | | ||||||||||||||||| || | ||||| |||||| || | |||||||| ||||||||   |  || ||||||||||||||||||||||| |||||    
T  13123769 tccaatcaccggcttgttctaataggcttctgctacctacaccaaggttatactagttaaagaggaagttatagaatgctcaagaagtcccctcatgcac 13123670  T
Q  307 gaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcg 406  Q
     ||| || |||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||| |||    
T  13123669 taagtaatagttcagaaa-aggctgactaagactcacttcgcttaagcgacggctagctcgcttaagcgaccaacttacagtaggtctgggttcagttcg 13123571  T
Q  407 cttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcac 471  Q
    ||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  13123570 cttacgggtcgctcacggttcgcttgagcgaactttggacagaatcaaaatggtttttcgctcac 13123506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 19 - 471
Target Start/End: Complemental strand, 12710896 - 12710435
Alignment:
Q  19 aacctgtgtatatctacatacaactcaactac-acatatattccatatgacttactactccgagaattctaacaatccagaacatacacaattaattatg 117  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||| | || || | |||| ||||||||||||||||| ||||     
T  12710896 aacctgtgtatatctacatacaactcaactactacatatatttcatatgacttaatactcc-ataactcga-caattcagaacatacacaattatttata 12710799  T
Q  118 attatgcgcatacatcaatttcattcaata-gttata----------tattcacttgattcctcactcaatcatctccaaaattcactaacattaaccaa 206  Q
    ||||||| |||||||||||  |||||   | ||||||          |||||||||  || |  || |||||| | |||| ||| ||||| |  || |||    
T  12710798 attatgcacatacatcaatcacattcctcatgttatacatatatacgtattcacttatttacatacacaatcaacaccaacatttactaataccaatcaa 12710699  T
Q  207 ttcgatcaccggcttgttctagtatgattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaagtcccctcgtgcac 306  Q
    | | |||||||||||||| || || | ||||  |||||| || | |||||||| ||||||||   |  || ||||||||||||||||||||||| |||||    
T  12710698 tccaatcaccggcttgttataataggcttcttctacctacaccaaggttatactagttaaagaggaagttatagaatgctcaagaagtcccctcatgcac 12710599  T
Q  307 gaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcg 406  Q
     ||| || |||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||| |||    
T  12710598 taagtaatagttcagaaa-aggctgactaagactcacttcgcttaagcgacggctagctcgcttaagcgaccaacttacagtaggtctgggttcagttcg 12710500  T
Q  407 cttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcac 471  Q
    ||||| | |||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||    
T  12710499 cttacaggtcgctcacggttcgcttgagcgaactttggacagaatcaaaatggtttttggctcac 12710435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 279 - 474
Target Start/End: Original strand, 13006706 - 13006901
Alignment:
Q  279 agaatgctcaagaagtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgacc 378  Q
    |||| ||||||||||||||||| ||||| |||||| |||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||| |||||    
T  13006706 agaacgctcaagaagtcccctcatgcactaagcaacagttcagaaa-aggctgattaaggttcacttcgcttaagcgacggctagttcgcttaagcgacc 13006804  T
Q  379 ggcttacagtaggt-ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 474  Q
     ||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||    
T  13006805 agcttacagtaggttctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatgaaaatggtttttcgctcacagg 13006901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 316 - 474
Target Start/End: Complemental strand, 12591389 - 12591230
Alignment:
Q  316 gttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtagg-tctgggttcagctcgcttacggt 414  Q
    ||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||| |||| ||||||||||     
T  12591389 gttcagaaaaacgctgactaaggttcacttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggatctgggatcagttcgcttacggg 12591290  T
Q  415 tcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 474  Q
    |||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||    
T  12591289 tcgctcacggttcgcttgagcgaaatttggacagaatcaaaatggtttttcgctcacagg 12591230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 339 - 472
Target Start/End: Complemental strand, 3858087 - 3857953
Alignment:
Q  339 ctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaa 438  Q
    |||| |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  3858087 ctcagttcgcttaagcgacggctagctcgcttaagcgaccaacttacagtaggtctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaa 3857988  T
Q  439 cttctgacagaatc-aaaatggtttttcgctcaca 472  Q
    |||   |||||||| ||||||||||||||||||||    
T  3857987 ctttgaacagaatcaaaaatggtttttcgctcaca 3857953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 317 - 455
Target Start/End: Original strand, 2464736 - 2464874
Alignment:
Q  317 ttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttc 416  Q
    |||||||| || || |||||  |||| |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||| |||||||||| ||    
T  2464736 ttcagaaaaagactaactaacactcagttcgcttaagcgacggctagctcgcttaagcgaccaacttacagtaggtctgggttcagttcgcttacgggtc 2464835  T
Q  417 gctcacggttcgcttgagcgaacttctgacagaatcaaa 455  Q
    |||||||||||||||| ||||||||  ||||||||||||    
T  2464836 gctcacggttcgcttgggcgaactttggacagaatcaaa 2464874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 301 - 455
Target Start/End: Original strand, 16090442 - 16090595
Alignment:
Q  301 gtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttc 400  Q
    |||||||||||||  ||||||||| |||||||||||  |||| |||||||||||||||||||| |||||||| |||||  ||||||||||||||||||||    
T  16090442 gtgcacgaagcaag-gttcagaaaaaggctgactaacactcagttcgcttaagcgacggctagctcgcttaagcgaccatcttacagtaggtctgggttc 16090540  T
Q  401 agctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaa 455  Q
    || |||||||||| |||||||||| | |||| |||||| |  || ||||||||||    
T  16090541 agttcgcttacgggtcgctcacggcttgcttaagcgaattcttggcagaatcaaa 16090595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 244 - 477
Target Start/End: Original strand, 16676623 - 16676845
Alignment:
Q  244 tatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca 342  Q
    |||| |||||||||||||||| ||||||  || ||  ||||||||| | | ||||||  ||||||| ||||  ||||| |||| ||||||||||||   |    
T  16676623 tatataagggttatacaagttgaaggaaccatgtttcaatgctcaaaagggtcccctaatgcacgaggcaac-gttcaaaaagtggctgactaaggtcaa 16676721  T
Q  343 cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttc 442  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||| ||||||||           | |||||||||||||||| |      
T  16676722 cttcgcttaagcgacgactagttcgcttaagcgaccggcttacagtaagtctgggttccgctcgctt-----------atggttcgcttgagcgaattct 16676810  T
Q  443 tgacagaatcaaaatggtttttcgctcacaggttc 477  Q
    |||||||||||||||||||||||||| ||||||||    
T  16676811 tgacagaatcaaaatggtttttcgcttacaggttc 16676845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 244 - 477
Target Start/End: Original strand, 17650859 - 17651081
Alignment:
Q  244 tatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca 342  Q
    |||| |||||||||||||||| ||||||  || ||  ||||||||| | | ||||||  ||||||| ||||  ||||| |||| ||||||||||||   |    
T  17650859 tatataagggttatacaagttgaaggaaccatgtttcaatgctcaaaagggtcccctaatgcacgaggcaac-gttcaaaaagtggctgactaaggtcaa 17650957  T
Q  343 cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttc 442  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||| ||||||||           | |||||||||||||||| |      
T  17650958 cttcgcttaagcgacgactagttcgcttaagcgaccggcttacagtaagtctgggttccgctcgctt-----------atggttcgcttgagcgaattct 17651046  T
Q  443 tgacagaatcaaaatggtttttcgctcacaggttc 477  Q
    |||||||||||||||||||||||||| ||||||||    
T  17651047 tgacagaatcaaaatggtttttcgcttacaggttc 17651081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 301 - 455
Target Start/End: Complemental strand, 29181807 - 29181654
Alignment:
Q  301 gtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttc 400  Q
    |||||||||||||  ||||||||| || ||||||||  |||| || ||||||||||||||||| |||||||| |||||  ||||||||||||||||||||    
T  29181807 gtgcacgaagcaag-gttcagaaaaagactgactaacactcagtttgcttaagcgacggctagctcgcttaagcgaccatcttacagtaggtctgggttc 29181709  T
Q  401 agctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaa 455  Q
    || ||||||| || |||||||||| |||||| ||||||||  || ||||||||||    
T  29181708 agttcgcttatgggtcgctcacggctcgcttaagcgaactcttggcagaatcaaa 29181654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 343 - 455
Target Start/End: Complemental strand, 20311709 - 20311597
Alignment:
Q  343 cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttc 442  Q
    ||||||||||||||||||||| |||||||| |||||||||| ||||| |||||||||| ||||||||||||||||||  |||||||||| |||||| |      
T  20311709 cttcgcttaagcgacggctagctcgcttaagcgaccggcttgcagtaagtctgggttctgctcgcttacggttcgcttgcggttcgcttaagcgaattct 20311610  T
Q  443 tgacagaatcaaa 455  Q
    || ||||||||||    
T  20311609 tggcagaatcaaa 20311597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 252 - 477
Target Start/End: Original strand, 13678770 - 13678995
Alignment:
Q  252 ggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca-cttcgct 349  Q
    |||||||||| || || |||| |||||  ||||||||| | | ||||||  ||||||| ||||| ||||| |||| |||||||||||| ||| |||||||    
T  13678770 ggttatacaaattgaaagaaacattttttaatgctcaaaaggatcccctaatgcacgaggcaaa-gttcaaaaagtggctgactaagg-tcatcttcgct 13678867  T
Q  350 taagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacaga 449  Q
    |||||||||||| |||||||||| ||||||||||||||   ||  |||||   |||||| ||| ||||||  |||||||||| |||||||||||||||||    
T  13678868 taagcgacggctggttcgcttaagcgaccggcttacagagagttggggtttccctcgctaacgtttcgcttgcggttcgcttaagcgaacttctgacaga 13678967  T
Q  450 atcaaaatggtttttcgctcacaggttc 477  Q
    ||  ||||| ||||||||| || |||||    
T  13678968 atggaaatgatttttcgcttacgggttc 13678995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 313 - 419
Target Start/End: Complemental strand, 11390024 - 11389918
Alignment:
Q  313 aaagttcagaaagaggctgactaaggctca-cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttac 411  Q
    |||||||| |||| |||||||||||| ||| ||||||||||||||||||||| |||||||| |||||| || |||||| |||||||||| ||||||||||    
T  11390024 aaagttcaaaaagtggctgactaagg-tcatcttcgcttaagcgacggctagctcgcttaagcgaccgactcacagtaagtctgggttccgctcgcttac 11389926  T
Q  412 ggttcgct 419  Q
    ||||||||    
T  11389925 ggttcgct 11389918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 19 - 136
Target Start/End: Original strand, 13742686 - 13742803
Alignment:
Q  19 aacctgtgtatatctacatacaactcaactac-acatatattccatatgacttactactccgagaattctaacaatccagaacatacacaattaattatg 117  Q
    |||||||||||||| ||||||||||| ||||  |||||| || |||||||||||||||||| | || || |||||||||||||||||||||||| ||||     
T  13742686 aacctgtgtatatcaacatacaactcgactattacatatgtttcatatgacttactactcc-acaactcaaacaatccagaacatacacaattatttata 13742784  T
Q  118 attatgcgcatacatcaat 136  Q
    ||||||| |||||||||||    
T  13742785 attatgctcatacatcaat 13742803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 244 - 449
Target Start/End: Original strand, 46625259 - 46625464
Alignment:
Q  244 tatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca 342  Q
    ||||| ||||| ||||||||| || |||| |||||| ||||||||| | | | |||| ||||||||| ||||| |||| | || ||||||||||| |  |    
T  46625259 tataccagggtcatacaagttgaaagaaacattttaaaatgctcaaaaggattccctagtgcacgaaacaaaa-ttcaaagagtggctgactaagaccta 46625357  T
Q  343 cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttc 442  Q
    ||||||||||||||||||| | |||||||| ||||| ||||||||   ||  | |||| ||||||| | |||| |||| |||||||||| ||||||||||    
T  46625358 cttcgcttaagcgacggctggctcgcttaagcgacctgcttacagagagttggcgttctgctcgctaatggtttgctcgcggttcgcttaagcgaacttc 46625457  T
Q  443 tgacaga 449  Q
    || ||||    
T  46625458 tggcaga 46625464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 294 - 409
Target Start/End: Complemental strand, 11383554 - 11383440
Alignment:
Q  294 tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca-cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggt 392  Q
    |||||| |||||||| ||||| ||||| |||| |||||||||||| ||| ||||||||||||||||||||| |||||||| |||| |||| |||||| ||    
T  11383554 tcccctagtgcacgaggcaaa-gttcaaaaagtggctgactaagg-tcatcttcgcttaagcgacggctagctcgcttaagcgacaggctcacagtaagt 11383457  T
Q  393 ctgggttcagctcgctt 409  Q
    |||||||| ||||||||    
T  11383456 ctgggttccgctcgctt 11383440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 316 - 439
Target Start/End: Complemental strand, 14320316 - 14320192
Alignment:
Q  316 gttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttc-agctcgcttacggt 414  Q
    ||||||||| ||||||||||||||||| ||||||||||||| || ||| |||||||| ||||||||| |||| | ||   ||| |  ||||||| || ||    
T  14320316 gttcagaaaaaggctgactaaggctcagttcgcttaagcgaagggtagctcgcttaagcgaccggctcacagaaagttgaggtcctcgctcgctcacagt 14320217  T
Q  415 tcgctcacggttcgcttgagcgaac 439  Q
    |||||||||||||||||||||||||    
T  14320216 tcgctcacggttcgcttgagcgaac 14320192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 362 - 455
Target Start/End: Original strand, 2966383 - 2966476
Alignment:
Q  362 agttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaa 455  Q
    ||||||||||| ||||| ||||||||||||||||||||||| ||||||| || ||| |||||| |||||| |||||| |  || ||||||||||    
T  2966383 agttcgcttaagcgaccagcttacagtaggtctgggttcagttcgcttatgggtcgttcacggctcgcttaagcgaattcttggcagaatcaaa 2966476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 362 - 455
Target Start/End: Complemental strand, 20907086 - 20906993
Alignment:
Q  362 agttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaa 455  Q
    ||||||||||| ||||| ||||||||||||||||||||||| ||||||| | |||| |||||| |||||| |||||| |  || ||||||||||    
T  20907086 agttcgcttaagcgaccagcttacagtaggtctgggttcagttcgcttatgtttcgttcacggctcgcttaagcgaattcttggcagaatcaaa 20906993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 136
Target Start/End: Original strand, 13006489 - 13006604
Alignment:
Q  20 acctgtgtatatctacatacaactcaactac-acatatattccatatgacttactactccgagaattctaacaatccagaacatacacaattaattatga 118  Q
    ||||||||||||||||||||||||| || || |||||| |   ||||||||||||||||| | || || |||||||||| || |||||||||| |||| |    
T  13006489 acctgtgtatatctacatacaactcgaccactacatatgtataatatgacttactactcc-acaactcaaacaatccag-acttacacaattatttataa 13006586  T
Q  119 ttatgcgcatacatcaat 136  Q
    |||||| |||||||||||    
T  13006587 ttatgcacatacatcaat 13006604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 451
Target Start/End: Original strand, 13678982 - 13679030
Alignment:
Q  404 tcgcttacgg-ttcgctcacggttcgcttgagcgaacttctgacagaat 451  Q
    |||||||||| |||||||||||||||||||||||| | |||||||||||    
T  13678982 tcgcttacgggttcgctcacggttcgcttgagcgagcgtctgacagaat 13679030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 51
Target Start/End: Original strand, 11303033 - 11303064
Alignment:
Q  20 acctgtgtatatctacatacaactcaactaca 51  Q
    ||||||||||||||||||||||||||||||||    
T  11303033 acctgtgtatatctacatacaactcaactaca 11303064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 415 - 465
Target Start/End: Complemental strand, 21231582 - 21231532
Alignment:
Q  415 tcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttc 465  Q
    ||||| ||||||||||||||||||||||||  ||||| |||||| ||||||    
T  21231582 tcgctgacggttcgcttgagcgaacttctggtagaatgaaaatgatttttc 21231532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 294 - 419
Target Start/End: Complemental strand, 21231690 - 21231567
Alignment:
Q  294 tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca-cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggt 392  Q
    |||||| |||||||| ||||| ||||| |||| ||||||| |||| ||| |||||||||||||||| | |||| |||||| ||||| ||| |||| | ||    
T  21231690 tcccctagtgcacgaggcaaa-gttca-aaagtggctgacaaagg-tcatcttcgcttaagcgacgaccagtttgcttaagcgaccagctcacagaaagt 21231594  T
Q  393 ctgggttcagctcgcttacggttcgct 419  Q
      |||||| ||||||| ||||||||||    
T  21231593 tggggttccgctcgctgacggttcgct 21231567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 440
Target Start/End: Original strand, 13664450 - 13664487
Alignment:
Q  404 tcgcttacgg-ttcgctcacggttcgcttgagcgaact 440  Q
    |||||||||| |||||||||||||||||||||||||||    
T  13664450 tcgcttacgggttcgctcacggttcgcttgagcgaact 13664487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 19 - 47
Target Start/End: Original strand, 4280144 - 4280172
Alignment:
Q  19 aacctgtgtatatctacatacaactcaac 47  Q
    |||||||||||||||||||||||||||||    
T  4280144 aacctgtgtatatctacatacaactcaac 4280172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 88 - 132
Target Start/End: Original strand, 13318007 - 13318051
Alignment:
Q  88 aacaatccagaacatacacaattaattatgattatgcgcatacat 132  Q
    ||||||||||||  |||||||||||| || |||||||||||||||    
T  13318007 aacaatccagaaattacacaattaatcataattatgcgcatacat 13318051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 19 - 47
Target Start/End: Original strand, 19616476 - 19616504
Alignment:
Q  19 aacctgtgtatatctacatacaactcaac 47  Q
    |||||||||||||||||||||||||||||    
T  19616476 aacctgtgtatatctacatacaactcaac 19616504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 293 - 357
Target Start/End: Complemental strand, 20907133 - 20907071
Alignment:
Q  293 gtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgac 357  Q
    ||||||| ||||||||||||| | |||||| | ||||||||||| ||||| ||||||||||||||    
T  20907133 gtcccctagtgcacgaagcaaga-ttcagata-aggctgactaacgctcagttcgcttaagcgac 20907071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 161; Significance: 1e-85; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 150 - 474
Target Start/End: Complemental strand, 8046744 - 8046420
Alignment:
Q  150 tatatattcacttgattcctcactcaatcatctccaaaattcactaacattaaccaattcgatcaccggcttgttctagtatgattctgatacctataca 249  Q
    |||||||||||||| || |  || ||||||||||||| ||| |||||||  || |||| | ||| ||||||||||||| || ||||| | |||||| ||     
T  8046744 tatatattcacttgttttcatacacaatcatctccaacatttactaacaccaatcaatccaatcgccggcttgttctaataggattcggttacctacacc 8046645  T
Q  250 agggttatacaagttaaaggaaatattttagaatgctcaagaagtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgct 349  Q
    |||||||||| ||||||||   |  || ||||||||||||||||||||||| ||||| ||| || |||||||||| ||||||||||||||||||||||||    
T  8046644 agggttatactagttaaagaggaagttatagaatgctcaagaagtcccctcatgcactaagtaacagttcagaaaaaggctgactaaggctcacttcgct 8046545  T
Q  350 taagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacaga 449  Q
    ||||||||| |||| |||||||| |||||  |||| ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||  ||||||    
T  8046544 taagcgacgtctagctcgcttaagcgaccaacttatagtaggtctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacaga 8046445  T
Q  450 atcaaaatggtttttcgctcacagg 474  Q
    |||||||||||||||||||||||||    
T  8046444 atcaaaatggtttttcgctcacagg 8046420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 316 - 474
Target Start/End: Original strand, 53483013 - 53483171
Alignment:
Q  316 gttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtagg-tctgggttcagctcgcttacggt 414  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| |||||||||||| |||||| |||| ||||||||||     
T  53483013 gttcagaaa-aggctgactaaggttcacttcgcttaagcgacggcaagttcgcttaagcgaccagcttacagtaggctctgggctcagttcgcttacggg 53483111  T
Q  415 tcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 474  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  53483112 tcgctcacggttcgcttgagcgaactttggacagaatcaaaatggtttttcgctcacagg 53483171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 301 - 455
Target Start/End: Complemental strand, 16147529 - 16147376
Alignment:
Q  301 gtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttc 400  Q
    |||||||||||||  ||||||||| |||||||||||  |||| |||||||||||||||||||| |||||||| |||||  ||||||||||||||||||||    
T  16147529 gtgcacgaagcaag-gttcagaaaaaggctgactaacactcagttcgcttaagcgacggctagctcgcttaagcgaccatcttacagtaggtctgggttc 16147431  T
Q  401 agctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaa 455  Q
    || |||||||||| |||||||||| |||||| |||||| |  || ||||||||||    
T  16147430 agttcgcttacgggtcgctcacggctcgcttaagcgaattcttggcagaatcaaa 16147376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 293 - 455
Target Start/End: Original strand, 11847453 - 11847614
Alignment:
Q  293 gtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggt 392  Q
    ||||||| |||||| ||||||| |||||||||||||||||||||||||||  ||||||||||||||| |||||||||||| |||||  | ||||| | ||    
T  11847453 gtcccctagtgcacaaagcaaa-gttcagaaagaggctgactaaggctcagctcgcttaagcgacgggtagttcgcttaagcgaccaac-tacaggaagt 11847550  T
Q  393 ctgggttc-agctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaa 455  Q
     ||| ||| ||||||||||||| ||||||||||||||||| |||||| |  || ||||||||||    
T  11847551 ttggattctagctcgcttacgggtcgctcacggttcgcttaagcgaattcttggcagaatcaaa 11847614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 294 - 477
Target Start/End: Original strand, 15407438 - 15407608
Alignment:
Q  294 tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca-cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggt 392  Q
    |||||| |||||||| ||||| ||||| |||| ||||||||| || ||| |||||||||||||||||| ||||||||||| ||||||||| |||| | ||    
T  15407438 tcccctagtgcacgaggcaaa-gttca-aaagtggctgactatgg-tcatcttcgcttaagcgacggccagttcgcttaagcgaccggctcacagaaagt 15407534  T
Q  393 ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacaggttc 477  Q
    || ||||| ||           ||||| |||||||||||||||||||||||| ||||||||||||||||||||||| || |||||    
T  15407535 ctaggttccgc-----------tcgctgacggttcgcttgagcgaacttctggcagaatcaaaatggtttttcgcttacgggttc 15407608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 296 - 449
Target Start/End: Original strand, 15244566 - 15244719
Alignment:
Q  296 ccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctg 395  Q
    |||| ||||||||||||||| |||| |||| ||||||||||| |   ||||| ||||||||||| |   |||||||| ||||||||||||||   ||  |    
T  15244566 ccctagtgcacgaagcaaaatttcaaaaagtggctgactaagaccttcttcgattaagcgacggttgactcgcttaagcgaccggcttacagagagttgg 15244665  T
Q  396 ggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacaga 449  Q
     |||| ||||||| | || ||||||||||||||||| |||||||||||||||||    
T  15244666 cgttccgctcgctaatggctcgctcacggttcgcttaagcgaacttctgacaga 15244719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 327 - 419
Target Start/End: Original strand, 14486052 - 14486144
Alignment:
Q  327 ggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgct 419  Q
    |||||||||||||||||||||||||||||| |||| | |||||||| ||||||||||||||   || ||||||| ||||||| ||||||||||    
T  14486052 ggctgactaaggctcacttcgcttaagcgaaggctggctcgcttaagcgaccggcttacagagagtttgggttccgctcgctcacggttcgct 14486144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 296 - 449
Target Start/End: Original strand, 13887138 - 13887289
Alignment:
Q  296 ccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctg 395  Q
    |||| ||||||||||||||| |||| |||| |||| |||||| |   ||||||||||||||||||| | |||||||| ||||||||||||||   ||  |    
T  13887138 ccctagtgcacgaagcaaaa-ttca-aaagtggctaactaagaccttcttcgcttaagcgacggctggctcgcttaaacgaccggcttacagagagttgg 13887235  T
Q  396 ggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacaga 449  Q
     |||| ||||||| | ||||||| |||||||||||| ||| |||||||||||||    
T  13887236 cgttctgctcgctaatggttcgcgcacggttcgcttaagcaaacttctgacaga 13887289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 296 - 449
Target Start/End: Original strand, 13887995 - 13888146
Alignment:
Q  296 ccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctg 395  Q
    |||| ||||||||||||||| |||| |||| |||| |||||| |   ||||||||||||||||||| | |||||||| ||||||||||||||   ||  |    
T  13887995 ccctagtgcacgaagcaaaa-ttca-aaagtggctaactaagaccttcttcgcttaagcgacggctggctcgcttaaacgaccggcttacagagagttgg 13888092  T
Q  396 ggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacaga 449  Q
     |||| ||||||| | ||||||| |||||||||||| ||| |||||||||||||    
T  13888093 cgttctgctcgctaatggttcgcgcacggttcgcttaagcaaacttctgacaga 13888146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 88 - 145
Target Start/End: Complemental strand, 14555938 - 14555881
Alignment:
Q  88 aacaatccagaacatacacaattaattatgattatgcgcatacatcaatttcattcaa 145  Q
    |||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||    
T  14555938 aacaatccagaacaaacacaattaattataattatgctcatacatcaatttcattcaa 14555881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 296 - 445
Target Start/End: Original strand, 15307471 - 15307620
Alignment:
Q  296 ccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctg 395  Q
    |||| ||||||||||||||  |||  |||| ||||||||||| |   |||||||||||||| |||| | |||||||| |||||| |||||||   ||  |    
T  15307471 ccctagtgcacgaagcaaagtttcgaaaagtggctgactaagaccttcttcgcttaagcgatggctggctcgcttaagcgaccgacttacagagagttgg 15307570  T
Q  396 ggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctga 445  Q
     |||| ||||||| | || ||||||||||||||||| |||||||||||||    
T  15307571 cgttccgctcgctaatggctcgctcacggttcgcttaagcgaacttctga 15307620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 136
Target Start/End: Complemental strand, 8046893 - 8046777
Alignment:
Q  19 aacctgtgtatatctacatacaactcaacta-cacatatattccatatgacttactactccgagaattctaacaatccagaacatacacaattaattatg 117  Q
    |||||||||||||||||||||||||| ||||  ||||||||| |||||||||||||||||| | || || |  |||||| | |||||||||||| ||||     
T  8046893 aacctgtgtatatctacatacaactcgactattacatatatttcatatgacttactactcc-acaactc-agtaatccaaatcatacacaattatttata 8046796  T
Q  118 attatgcgcatacatcaat 136  Q
    ||||||| || ||||||||    
T  8046795 attatgcacacacatcaat 8046777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 237 - 289
Target Start/End: Original strand, 14485985 - 14486037
Alignment:
Q  237 tgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaa 289  Q
    |||||||||||||||||||||||||| | || |||| ||||||||||||||||    
T  14485985 tgatacctatacaagggttatacaagctgaaagaaacattttagaatgctcaa 14486037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 293 - 372
Target Start/End: Original strand, 27905613 - 27905691
Alignment:
Q  293 gtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaa 372  Q
    |||||||  |||||||||||||| ||||||||| |||||||| |||||||  |||||||||||| || ||| ||||||||    
T  27905613 gtcccctaatgcacgaagcaaaaattcagaaagtggctgact-aggctcagctcgcttaagcgaagggtagctcgcttaa 27905691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 51
Target Start/End: Original strand, 15533967 - 15533998
Alignment:
Q  20 acctgtgtatatctacatacaactcaactaca 51  Q
    ||||||||||||||||||||||||||||||||    
T  15533967 acctgtgtatatctacatacaactcaactaca 15533998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 23 - 51
Target Start/End: Original strand, 14048388 - 14048416
Alignment:
Q  23 tgtgtatatctacatacaactcaactaca 51  Q
    |||||||||||||||||||||||||||||    
T  14048388 tgtgtatatctacatacaactcaactaca 14048416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 154; Significance: 2e-81; HSPs: 2)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 150 - 471
Target Start/End: Original strand, 324 - 644
Alignment:
Q  150 tatatattcacttgattcctcactcaatcatctccaaaattcactaacattaaccaattcgatcaccggcttgttctagtatgattctgatacctataca 249  Q
    |||||||||||||| || |  || | ||||||||||| ||| |||||||  || |||| | ||||| ||||||||||| || ||||| | |||||| ||     
T  324 tatatattcacttgttttcatacaccatcatctccaacatttactaacaccaatcaatccaatcactggcttgttctaataggattcggttacctacacc 423  T
Q  250 agggttatacaagttaaaggaaatattttagaatgctcaagaagtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgct 349  Q
    | |||||||| ||||||||   |  || ||||||||||||||||||||||| ||||| ||| || |||||||||| |||||||||||| |||||||||||    
T  424 aaggttatactagttaaagaggaagttatagaatgctcaagaagtcccctcatgcactaagtaatagttcagaaa-aggctgactaagactcacttcgct 522  T
Q  350 taagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacaga 449  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||||  ||||||    
T  523 taagcgacggctagttcgcttaagcgaccagcttacagtaggtctgggttcagttcgcttacgggtcgctcacggttcgattgagcgaactttggacaga 622  T
Q  450 atcaaaatggtttttcgctcac 471  Q
    ||||||||||||||||||||||    
T  623 atcaaaatggtttttcgctcac 644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 19 - 136
Target Start/End: Original strand, 153 - 269
Alignment:
Q  19 aacctgtgtatatctacatacaactcaacta-cacatatattccatatgacttactactccgagaattctaacaatccagaacatacacaattaattatg 117  Q
    |||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||| | |  || |||||||||||||||||||||||| ||||     
T  153 aacctgtgtatatctacatacaactcaactattacatatatttcatatgacttactactcc-acagctc-aacaatccagaacatacacaattatttata 250  T
Q  118 attatgcgcatacatcaat 136  Q
    ||||||| || ||||||||    
T  251 attatgcacacacatcaat 269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 151; Significance: 1e-79; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 19 - 471
Target Start/End: Original strand, 23865615 - 23866078
Alignment:
Q  19 aacctgtgtatatctacatacaactcaactaca-catatattccatat-gacttactactccgagaattctaacaatccagaacatacacaattaattat 116  Q
    |||||||||||||||||||||||||||||||   |||||||| ||||| ||||||||||||||  || || |||||| ||||||||||||||||| ||||    
T  23865615 aacctgtgtatatctacatacaactcaactaatgcatatatttcatattgacttactactccgt-aactc-aacaattcagaacatacacaattatttat 23865712  T
Q  117 gattatgcgcatacatcaatttcattcaata-gttata----------tattcacttgattcctcactcaatcatctccaaaattcactaacattaacca 205  Q
     ||||||| |||||||||||  |||||   | ||||||          |||||||||  || |  || ||||||   |||| ||| ||||| |  || ||    
T  23865713 aattatgcacatacatcaatcacattcctcatgttatacatatacacgtattcacttatttacatacacaatcaataccaacatttactaataccaatca 23865812  T
Q  206 attcgatcaccggcttgttctagtatgattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaagtcccctcgtgca 305  Q
    || | ||||||||||||||||| || | ||||| |||||| || | |||||||| ||||||||   |  || ||||||||||||||||||||||| ||||    
T  23865813 atccaatcaccggcttgttctaataggcttctgctacctacaccaaggttatactagttaaagaggaagttatagaatgctcaagaagtcccctcatgca 23865912  T
Q  306 cgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctc 405  Q
    | ||| || |||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||| ||    
T  23865913 ctaagtaatagttcagaaaaaggctgactaagactcacttcgcttaagcgacggctagctcgcttaagcgaccaacttacagtaggtctgggttcagttc 23866012  T
Q  406 gcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcac 471  Q
    |||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||    
T  23866013 gcttacgggtcgctcacggttcgcttgagcgaactttggacagaatcaaaatggtttttcgatcac 23866078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 293 - 455
Target Start/End: Complemental strand, 24321376 - 24321216
Alignment:
Q  293 gtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggt 392  Q
    ||||||| ||| ||||||||| | |||||||| |||||| ||||  |||| ||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  24321376 gtcccctagtgtacgaagcaaga-ttcagaaa-aggctgtctaacactcagttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggt 24321279  T
Q  393 ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaa 455  Q
    |||||||||| |||||||||| |||||||||| |||||| |||||| |  || ||||||||||    
T  24321278 ctgggttcagttcgcttacgggtcgctcacggctcgcttaagcgaattcttggcagaatcaaa 24321216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 364 - 474
Target Start/End: Original strand, 17053949 - 17054060
Alignment:
Q  364 ttcgcttaatcgaccggcttacagtaggt-ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggttt 462  Q
    ||||||||| ||||| ||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||  |||||||| ||||||||||    
T  17053949 ttcgcttaagcgaccagcttacagtaggttctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatgaaaatggttt 17054048  T
Q  463 ttcgctcacagg 474  Q
    ||||||||||||    
T  17054049 ttcgctcacagg 17054060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 19 - 136
Target Start/End: Complemental strand, 19902924 - 19902808
Alignment:
Q  19 aacctgtgtatatctacatacaactcaactac-acatatattccatatgacttactactccgagaattctaacaatccagaacatacacaattaattatg 117  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||| | || ||  ||||||||||||||||||||||| ||||     
T  19902924 aacctgtgtatatctacatacaactcaactactacatatatttcatatgacttaatactcc-acaactc-gacaatccagaacatacacaattatttata 19902827  T
Q  118 attatgcgcatacatcaat 136  Q
    || |||| |||||||||||    
T  19902826 atcatgcacatacatcaat 19902808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 294 - 477
Target Start/End: Original strand, 25111338 - 25111508
Alignment:
Q  294 tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca-cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggt 392  Q
    |||||| |||||||| ||||| ||||| |||| ||||||||| || ||| |||||||||||||||||| ||||||||||| |||||| || |||| | ||    
T  25111338 tcccctagtgcacgaggcaaa-gttca-aaagtggctgactatgg-tcatcttcgcttaagcgacggccagttcgcttaagcgaccgactcacagaaagt 25111434  T
Q  393 ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacaggttc 477  Q
    |||||||| ||           ||||| |||||||||||||||||||||||| ||||||||||||||||||||||| || |||||    
T  25111435 ctgggttccgc-----------tcgctgacggttcgcttgagcgaacttctggcagaatcaaaatggtttttcgcttacgggttc 25111508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 343 - 477
Target Start/End: Complemental strand, 14057271 - 14057148
Alignment:
Q  343 cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttc 442  Q
    ||||||||||||||||||||| |||||||| ||||||||| |||| | |||||||||| ||           ||||| |||||||||||||||||||||     
T  14057271 cttcgcttaagcgacggctagctcgcttaagcgaccggctcacagaaagtctgggttccgc-----------tcgctgacggttcgcttgagcgaactta 14057183  T
Q  443 tgacagaatcaaaatggtttttcgctcacaggttc 477  Q
    || |||||||||||||||||||| ||||| |||||    
T  14057182 tggcagaatcaaaatggtttttcactcacgggttc 14057148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 252 - 419
Target Start/End: Original strand, 18613529 - 18613695
Alignment:
Q  252 ggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca-cttcgct 349  Q
    ||||||||||||| || | || |||||  ||||||||||| | |||||| |||||||| ||||| ||||| |||| ||| |||||||| ||| |||||||    
T  18613529 ggttatacaagttgaaaggaacatttttaaatgctcaagaggatcccctagtgcacgaggcaaa-gttca-aaagtggccgactaagg-tcatcttcgct 18613625  T
Q  350 taagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgct 419  Q
    |||||||||||| |||||||||| ||||| ||||||||   ||  |||||| ||||||| ||||||||||    
T  18613626 taagcgacggctggttcgcttaagcgacctgcttacagagagttggggttccgctcgctaacggttcgct 18613695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 90 - 145
Target Start/End: Complemental strand, 19988045 - 19987990
Alignment:
Q  90 caatccagaacatacacaattaattatgattatgcgcatacatcaatttcattcaa 145  Q
    ||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||    
T  19988045 caatccagaacatacacaattaattacaattatgctcatacatcaatttcattcaa 19987990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 21282245 - 21282300
Alignment:
Q  23 tgtgtatatctacatacaactcaactacacatatat-tccatatgacttactactc 77  Q
    ||||||||||||||||||||||||| | |||||||| | |||||||||||| ||||    
T  21282245 tgtgtatatctacatacaactcaaccatacatatatgtacatatgacttacaactc 21282300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 20 - 111
Target Start/End: Original strand, 17053780 - 17053870
Alignment:
Q  20 acctgtgtatatctacatacaactcaactac-acatatattccatatgacttactactccgagaattctaacaatccagaacatacacaatta 111  Q
    ||||||||||||||||||||||||| || || |||||| |  |||||||| ||||||||| | || || |||||||||| || ||||||||||    
T  17053780 acctgtgtatatctacatacaactcgaccactacatatgtatcatatgacatactactcc-acaactcaaacaatccag-acttacacaatta 17053870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 244 - 288
Target Start/End: Original strand, 21931018 - 21931062
Alignment:
Q  244 tatacaagggttatacaagttaaaggaaatattttagaatgctca 288  Q
    ||||||| ||||||||||||| || |||| |||||||||||||||    
T  21931018 tatacaaaggttatacaagttgaaagaaacattttagaatgctca 21931062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 19 - 47
Target Start/End: Original strand, 23825305 - 23825333
Alignment:
Q  19 aacctgtgtatatctacatacaactcaac 47  Q
    |||||||||||||||||||||||||||||    
T  23825305 aacctgtgtatatctacatacaactcaac 23825333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 19 - 47
Target Start/End: Complemental strand, 30766945 - 30766917
Alignment:
Q  19 aacctgtgtatatctacatacaactcaac 47  Q
    |||||||||||||||||||||||||||||    
T  30766945 aacctgtgtatatctacatacaactcaac 30766917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 146; Significance: 1e-76; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 19 - 471
Target Start/End: Complemental strand, 9628 - 9167
Alignment:
Q  19 aacctgtgtatatctacatacaactcaactac-acatatattccatatgacttactactccgagaattctaacaatccagaacatacacaattaattatg 117  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||| | || || | |||||||||||||| ||||||| ||||     
T  9628 aacctgtgtatatctacatacaactcaactactacatatatttcatatgacttaatactcc-acaactcga-caatccagaacatatacaattatttata 9531  T
Q  118 attatgcgcatacatcaatttcattcaata-gttata----------tattcacttgattcctcactcaatcatctccaaaattcactaacattaaccaa 206  Q
    || |||| |||||||||||  ||||||  | ||||||          |||||||||  || |  || |||||| | |||| ||| |||||    || |||    
T  9530 atcatgcacatacatcaatcacattcatcatgttatacatatatacgtattcacttattttcatacacaatcaacaccaacatttactaatgccaatcaa 9431  T
Q  207 ttcgatcaccggcttgttctagtatgattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaagtcccctcgtgcac 306  Q
    | |  |||||||||||||||| || | ||||| |||||| || | |||||||| ||||||||   |  ||  |||||||||||||||||||||| |||||    
T  9430 tccagtcaccggcttgttctaataggcttctgctacctacaccaaggttatactagttaaagaggaagttacagaatgctcaagaagtcccctcatgcac 9331  T
Q  307 gaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcg 406  Q
     ||| ||||||| ||||| |||||||||||| ||||||||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||| |||    
T  9330 taagtaaaagtttagaaa-aggctgactaagactcacttcgcttaagcgacggctagctcgcttaagcgaccaacttacagtaggtctgggttcagttcg 9232  T
Q  407 cttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcac 471  Q
    |||| || |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  9231 cttatgggtcgctcacggttcgcttgagcgaactttggacagaatcaaaatggtttttcgctcac 9167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 137; Significance: 3e-71; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 19 - 471
Target Start/End: Original strand, 110939 - 111378
Alignment:
Q  19 aacctgtgtatatctacatacaactcaactac-acatatattccatatgacttactactccgagaattctaacaatccagaacatacacaattaattatg 117  Q
    |||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||| | || || | ||||||||||| |||||||||| ||||     
T  110939 aacctgtgtatatctacatacaactcaactattacatatatttcatatgacttactactcc-acaactcga-caatccagaacctacacaattatttata 111036  T
Q  118 attatgcgcatacatcaatttcattcaata-gttatatat--------tcacttgattcctcactcaatcatctccaaaattcactaacattaaccaatt 208  Q
    |||| || |||||||||||  ||||| | | |||||||||        ||||||| || |  || ||||||||||||| ||| |||||||  || ||||     
T  111037 attacgcacatacatcaatcacattccacatgttatatatatacatattcacttgttttcatacacaatcatctccaacatttactaacaccaatcaatc 111136  T
Q  209 cgatcaccggcttgttctagtatgattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaagtcccctcgtgcacga 308  Q
    | ||||||||||||||||| || ||||| | |||||| || |||||||||| |||||||||| | ||| ||||||||||||||||||||||| ||||| |    
T  111137 caatcaccggcttgttctaataggattcagttacctacaccagggttatactagttaaaggagaaattatagaatgctcaagaagtcccctcatgcacta 111236  T
Q  309 agcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgct 408  Q
    || || |||||||||| |||||||||||| |||||||||||||||                    |||||  |||||||||||| ||||||||| |||||    
T  111237 agtaatagttcagaaa-aggctgactaagactcacttcgcttaag--------------------cgaccaacttacagtaggtatgggttcagttcgct 111315  T
Q  409 tacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcac 471  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  111316 tacgggtcgctcacggttcgcttgagcgaactttggacagaatcaaaatggtttttcgctcac 111378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 326 - 455
Target Start/End: Complemental strand, 91876 - 91747
Alignment:
Q  326 aggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggt 425  Q
    ||||| |||||  |||| |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||| |||||||||| |||||||||||    
T  91876 aggctaactaacactcagttcgcttaagcgacggctagctcgcttaagcgaccaacttacagtaggtctgggttcagttcgcttacgggtcgctcacggt 91777  T
Q  426 tcgcttgagcgaacttctgacagaatcaaa 455  Q
    ||||||| ||||||||  ||||||||||||    
T  91776 tcgcttgggcgaactttggacagaatcaaa 91747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 326 - 455
Target Start/End: Complemental strand, 97602 - 97473
Alignment:
Q  326 aggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggt 425  Q
    ||||| |||||  |||| |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||| |||||||||| |||||||||||    
T  97602 aggctaactaacactcagttcgcttaagcgacggctagctcgcttaagcgaccaacttacagtaggtctgggttcagttcgcttacgggtcgctcacggt 97503  T
Q  426 tcgcttgagcgaacttctgacagaatcaaa 455  Q
    ||||||| ||||||||  ||||||||||||    
T  97502 tcgcttgggcgaactttggacagaatcaaa 97473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 134; Significance: 2e-69; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 20 - 474
Target Start/End: Original strand, 23527632 - 23528099
Alignment:
Q  20 acctgtgtatatctacatacaactcaactac-acatatattccatatgacttactactccgagaattctaacaatccagaacatacacaattaattatga 118  Q
    ||||||||||||||||||||||||| || || |||||| |  |||||||||||||||||| | || || || |||||||| |  ||||||||| |||| |    
T  23527632 acctgtgtatatctacatacaactcgaccactacatatgtatcatatgacttactactcc-acaactcaaataatccaga-ctgacacaattatttataa 23527729  T
Q  119 ttatgcgcatacatcaatttcattcaata-gttatatat------------tcacttgattcctcactcaatcatctccaaaattcactaacattaacca 205  Q
    |||||| |||||||||||  ||||| | | |||||||||            ||||||| || | ||| ||| ||||||||| ||| |||||||  || ||    
T  23527730 ttatgcacatacatcaatcacattccacatgttatatatatacatacatattcacttgctttcacacccaaacatctccaacatttactaacaccaatca 23527829  T
Q  206 -attcgatcaccggcttgttctagtatgattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaagtcccctcgtgc 304  Q
     || | | |||||| |||||||| || ||||  | |||||| || |||||||||| ||||||||   |  ||  |||| ||||||||||||||||| |||    
T  23527830 tatccaaacaccggattgttctaataggatttggttacctacaccagggttatactagttaaagaggaagttaaagaacgctcaagaagtcccctcatgc 23527929  T
Q  305 acgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggt-ctgggttcagc 403  Q
    || |||||| |||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||     
T  23527930 actaagcaacagttcagaaa-aggctgattaaggttcacttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggttctgggttcagt 23528028  T
Q  404 tcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 474  Q
    |||||||||| |||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||    
T  23528029 tcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatgaaaatggtttttcgctcacagg 23528099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 339 - 472
Target Start/End: Complemental strand, 28890058 - 28889925
Alignment:
Q  339 ctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaa 438  Q
    |||| |||||||||||||||||||  |||||||| |||||  |||||||||||||||||||||| |||||||||| |||||||||| ||||||| |||||    
T  28890058 ctcagttcgcttaagcgacggctatctcgcttaagcgaccaacttacagtaggtctgggttcagttcgcttacgggtcgctcacggctcgcttgggcgaa 28889959  T
Q  439 cttctgacagaatcaaaatggtttttcgctcaca 472  Q
    |||  ||||||| |||||||||||||||||||||    
T  28889958 ctttggacagaaacaaaatggtttttcgctcaca 28889925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 339 - 472
Target Start/End: Complemental strand, 28896762 - 28896629
Alignment:
Q  339 ctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaa 438  Q
    |||| |||||||||||||||||||  |||||||| |||||  |||||||||||||||||||||| |||||||||| |||||||||| ||||||| |||||    
T  28896762 ctcagttcgcttaagcgacggctatctcgcttaagcgaccaacttacagtaggtctgggttcagttcgcttacgggtcgctcacggctcgcttgggcgaa 28896663  T
Q  439 cttctgacagaatcaaaatggtttttcgctcaca 472  Q
    |||  ||||||| |||||||||||||||||||||    
T  28896662 ctttggacagaaacaaaatggtttttcgctcaca 28896629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 339 - 472
Target Start/End: Complemental strand, 28910010 - 28909877
Alignment:
Q  339 ctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaa 438  Q
    |||| |||||||||||||||||||  |||||||| |||||  |||||||||||||||||||||| |||||||||| |||||||||| ||||||| |||||    
T  28910010 ctcagttcgcttaagcgacggctatctcgcttaagcgaccaacttacagtaggtctgggttcagttcgcttacgggtcgctcacggctcgcttgggcgaa 28909911  T
Q  439 cttctgacagaatcaaaatggtttttcgctcaca 472  Q
    |||  ||||||| |||||||||||||||||||||    
T  28909910 ctttggacagaaacaaaatggtttttcgctcaca 28909877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 339 - 472
Target Start/End: Complemental strand, 28931702 - 28931569
Alignment:
Q  339 ctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaa 438  Q
    |||| |||||||||||||||||||  |||||||| |||||  |||||||||||||||||||||| |||||||||| |||||||||| ||||||| |||||    
T  28931702 ctcagttcgcttaagcgacggctatctcgcttaagcgaccaacttacagtaggtctgggttcagttcgcttacgggtcgctcacggctcgcttgggcgaa 28931603  T
Q  439 cttctgacagaatcaaaatggtttttcgctcaca 472  Q
    |||  ||||||| |||||||||||||||||||||    
T  28931602 ctttggacagaaacaaaatggtttttcgctcaca 28931569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 339 - 472
Target Start/End: Complemental strand, 28946405 - 28946272
Alignment:
Q  339 ctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaa 438  Q
    |||| |||||||||||||||||||  |||||||| |||||  |||||||||||||||||||||| |||||||||| |||||||||| ||||||| |||||    
T  28946405 ctcagttcgcttaagcgacggctatctcgcttaagcgaccaacttacagtaggtctgggttcagttcgcttacgggtcgctcacggctcgcttgggcgaa 28946306  T
Q  439 cttctgacagaatcaaaatggtttttcgctcaca 472  Q
    |||  ||||||| |||||||||||||||||||||    
T  28946305 ctttggacagaaacaaaatggtttttcgctcaca 28946272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 293 - 455
Target Start/End: Original strand, 19236250 - 19236410
Alignment:
Q  293 gtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggt 392  Q
    ||||||| ||| ||||||||| | |||||||| |||||  ||||  |||| ||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  19236250 gtcccctagtgtacgaagcaaga-ttcagaaa-aggctatctaacactcagttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggt 19236347  T
Q  393 ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaa 455  Q
    |||||||||| ||||||| || |||||||||| |||||| |||||| |  || ||||||||||    
T  19236348 ctgggttcagttcgcttatgggtcgctcacggctcgcttaagcgaattcttggcagaatcaaa 19236410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 293 - 455
Target Start/End: Original strand, 22467130 - 22467290
Alignment:
Q  293 gtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggt 392  Q
    ||||||| ||| ||||||||| | |||||||| |||||| ||||  |||| | ||||||||||||||||||||||||||| ||||| |||||||||||||    
T  22467130 gtcccctagtgtacgaagcaaga-ttcagaaa-aggctgtctaacactcagtacgcttaagcgacggctagttcgcttaaccgaccagcttacagtaggt 22467227  T
Q  393 ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaa 455  Q
    |||||||||| ||||||| || |||||||||| |||||| |||||| |  || ||||||||||    
T  22467228 ctgggttcagttcgcttatgggtcgctcacggctcgcttaagcgaattcttggcagaatcaaa 22467290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 293 - 455
Target Start/End: Original strand, 22460506 - 22460666
Alignment:
Q  293 gtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggt 392  Q
    ||||||| ||| ||||||||| | |||||||| |||||| ||||  |||| ||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  22460506 gtcccctagtgtacgaagcaaga-ttcagaaa-aggctgtctaacactcagttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggt 22460603  T
Q  393 ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaa 455  Q
    |||||||||  ||||||| || || ||||||| |||||| |||||| |  || ||||||||||    
T  22460604 ctgggttcaattcgcttatgggtcactcacggctcgcttaagcgaattcttggcagaatcaaa 22460666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 339 - 472
Target Start/End: Complemental strand, 28933205 - 28933070
Alignment:
Q  339 ctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtct-gggttcagctcgcttacggttcgctcacggttcgcttgagcga 437  Q
    |||| ||||||||||| |||||||  |||||||| |||||  |||||||||||||| |||||||| |||||||||| |||||||||| ||||||  ||||    
T  28933205 ctcagttcgcttaagccacggctatctcgcttaaacgaccaacttacagtaggtctggggttcagttcgcttacgggtcgctcacggctcgctttggcga 28933106  T
Q  438 acttctgacagaatc-aaaatggtttttcgctcaca 472  Q
    ||||  ||||||| | ||||||||||||||||||||    
T  28933105 actttggacagaaacaaaaatggtttttcgctcaca 28933070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 294 - 451
Target Start/End: Complemental strand, 18408647 - 18408491
Alignment:
Q  294 tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcactt-cgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggt 392  Q
    |||||| |||||||| ||||| ||||| |||| |||||||||||| ||| || |||||||||||||||||||| |||||| |||||||||||||| | ||    
T  18408647 tcccctagtgcacgaggcaaa-gttcaaaaagtggctgactaagg-tcattttcgcttaagcgacggctagtttgcttaagcgaccggcttacagaaagt 18408550  T
Q  393 ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaat 451  Q
      |||||| ||||||| ||||||||||  ||  |||||| |||||||||||| ||||||    
T  18408549 tggggttccgctcgctaacggttcgcttgcgactcgcttaagcgaacttctggcagaat 18408491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 293 - 439
Target Start/End: Original strand, 34829432 - 34829578
Alignment:
Q  293 gtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggt 392  Q
    ||||||| |||||||||||||| ||||||||| ||| ||||||||||||| ||||||||||||| || ||| |||||||| ||||| ||| |||  ||||    
T  34829432 gtcccctagtgcacgaagcaaa-gttcagaaaaaggttgactaaggctcagttcgcttaagcgaagggtagctcgcttaagcgaccagctcacaaaaggt 34829530  T
Q  393 ctgggttc-agctcgcttacggttcgctcacggttcgcttgagcgaac 439  Q
      ||||||  |||| || ||||||||||| | ||||||||||||||||    
T  34829531 tggggttctcgctcactcacggttcgctcgcagttcgcttgagcgaac 34829578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 88 - 145
Target Start/End: Complemental strand, 22232493 - 22232436
Alignment:
Q  88 aacaatccagaacatacacaattaattatgattatgcgcatacatcaatttcattcaa 145  Q
    ||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||    
T  22232493 aacaatccagaacatacacgattaattataattatgctcatacatcaatttcattcaa 22232436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 404 - 474
Target Start/End: Original strand, 20819618 - 20819689
Alignment:
Q  404 tcgcttacggttcgctcacg-gttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 474  Q
    ||||| |||||||||||||  ||||||||||||||| ||  |||||||||||||||||||||||||||||||    
T  20819618 tcgctcacggttcgctcacaagttcgcttgagcgaaatttggacagaatcaaaatggtttttcgctcacagg 20819689  T

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Target: chr5; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 404 - 474
Target Start/End: Original strand, 20826718 - 20826789
Alignment:
Q  404 tcgcttacggttcgctcacg-gttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 474  Q
    ||||| |||||||||||||  ||||||||||||||| ||  |||||||||||||||||||||||||||||||    
T  20826718 tcgctcacggttcgctcacaagttcgcttgagcgaaatttggacagaatcaaaatggtttttcgctcacagg 20826789  T

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Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 301 - 439
Target Start/End: Original strand, 20781102 - 20781240
Alignment:
Q  301 gtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttc 400  Q
    ||||||||||||||| |||||||| |||||||||||  || | |||||||||||||||| ||| |||||||| ||||| ||| |||  ||||   ||| |    
T  20781102 gtgcacgaagcaaaa-ttcagaaaaaggctgactaacacttagttcgcttaagcgacgggtagctcgcttaagcgaccagctcacacaaggttgaggtcc 20781200  T
Q  401 -agctcgcttacggttcgctcacggttcgcttgagcgaac 439  Q
      ||||||| ||||||||||| | |||||||| |||||||    
T  20781201 tcgctcgctcacggttcgctcgcagttcgcttaagcgaac 20781240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 301 - 439
Target Start/End: Original strand, 20772327 - 20772465
Alignment:
Q  301 gtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttc 400  Q
    ||||||||||||||  ||||||||  ||||||||||  |||| |||||||||||||||| ||| |||||||| ||||| ||| |||  ||||   ||| |    
T  20772327 gtgcacgaagcaaat-ttcagaaaagggctgactaacactcagttcgcttaagcgacgggtagctcgcttaagcgaccagctcacacaaggttgaggtcc 20772425  T
Q  401 -agctcgcttacggttcgctcacggttcgcttgagcgaac 439  Q
      ||||||| ||||||||||| | |||||||| |||||||    
T  20772426 tcgctcgctcacggttcgctcgcagttcgcttaagcgaac 20772465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 301 - 439
Target Start/End: Complemental strand, 24930627 - 24930489
Alignment:
Q  301 gtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttc 400  Q
    ||||||||||||||| ||||||||  ||||||||||  |||| |||||||||||||||  ||| |||||||| ||||| ||| |||  ||||   ||| |    
T  24930627 gtgcacgaagcaaaa-ttcagaaaagggctgactaacactcagttcgcttaagcgacgagtagctcgcttaagcgaccagctcacacaaggttgaggtcc 24930529  T
Q  401 -agctcgcttacggttcgctcacggttcgcttgagcgaac 439  Q
      ||||||| ||||||||||| | |||||||| |||||||    
T  24930528 tcgctcgctcacggttcgctcgcagttcgcttaagcgaac 24930489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 367 - 416
Target Start/End: Complemental strand, 22439370 - 22439321
Alignment:
Q  367 gcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttc 416  Q
    |||||| |||||||||||||||| |||||||||| ||||||||| |||||    
T  22439370 gcttaagcgaccggcttacagtaagtctgggttctgctcgcttaaggttc 22439321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 51
Target Start/End: Complemental strand, 37805311 - 37805280
Alignment:
Q  20 acctgtgtatatctacatacaactcaactaca 51  Q
    ||||||||||||||||||||||||||||||||    
T  37805311 acctgtgtatatctacatacaactcaactaca 37805280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 19 - 47
Target Start/End: Complemental strand, 1857499 - 1857471
Alignment:
Q  19 aacctgtgtatatctacatacaactcaac 47  Q
    |||||||||||||||||||||||||||||    
T  1857499 aacctgtgtatatctacatacaactcaac 1857471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 19 - 47
Target Start/End: Complemental strand, 21675467 - 21675439
Alignment:
Q  19 aacctgtgtatatctacatacaactcaac 47  Q
    |||||||||||||||||||||||||||||    
T  21675467 aacctgtgtatatctacatacaactcaac 21675439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 132; Significance: 3e-68; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 190 - 474
Target Start/End: Original strand, 241 - 504
Alignment:
Q  190 tcactaacattaaccaattcgatcaccggcttgttctagtatgattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaa 289  Q
    |||||||||| |||||||||||||||| || |||||||||| ||||||||||||||||||| | ||||||||||| || |||||||||||||||||||||    
T  241 tcactaacatcaaccaattcgatcaccagcgtgttctagtaggattctgatacctatacaaagtttatacaagttgaaagaaatattttagaatgctcaa 340  T
Q  290 gaagtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagta 389  Q
    || ||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||                    |||| ||||||||| |    
T  341 gatgtccccttgtgcacgaagcaaaa-ttcagaaagaggctgactaaggttcacttcgcttaag--------------------cgactggcttacagaa 419  T
Q  390 ggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 474  Q
     |||||||||| ||||||||| |||||| |  |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  420 agtctgggttctgctcgcttagggttcgtttgcggttcgcttaagcgaacttctgacagaatcaaaatggtttttcgctcacagg 504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 190 - 474
Target Start/End: Original strand, 7386 - 7649
Alignment:
Q  190 tcactaacattaaccaattcgatcaccggcttgttctagtatgattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaa 289  Q
    |||||||||| |||||||||||||||| || |||||||||| ||||||||||||||||||| | ||||||||||| || |||||||||||||||||||||    
T  7386 tcactaacatcaaccaattcgatcaccagcgtgttctagtaggattctgatacctatacaaagtttatacaagttgaaagaaatattttagaatgctcaa 7485  T
Q  290 gaagtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagta 389  Q
    || ||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||                    |||| ||||||||| |    
T  7486 gatgtccccttgtgcacgaagcaaaa-ttcagaaagaggctgactaaggttcacttcgcttaag--------------------cgactggcttacagaa 7564  T
Q  390 ggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 474  Q
     |||||||||| ||||||||| |||||| |  |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  7565 agtctgggttctgctcgcttagggttcgtttgcggttcgcttaagcgaacttctgacagaatcaaaatggtttttcgctcacagg 7649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 129; Significance: 2e-66; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 327 - 471
Target Start/End: Complemental strand, 15121 - 14977
Alignment:
Q  327 ggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggtt 426  Q
    ||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  15121 ggctgactaaggtccacttcgcttaagcgacggctagttcgcttaagcgaccggcttacagtaagtctgggttcagctcgcttacggttcgctcacggtt 15022  T
Q  427 cgcttgagcgaacttctgacagaatcaaaatggtttttcgctcac 471  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  15021 cgcttgagcgaacttctgacagaatcaaaatggtttttcgctcac 14977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 127; Significance: 3e-65; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 279 - 472
Target Start/End: Original strand, 41111214 - 41111407
Alignment:
Q  279 agaatgctcaagaagtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgacc 378  Q
    |||| ||||||||||||||||| ||||| |||||| |||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||| |||||    
T  41111214 agaacgctcaagaagtcccctcatgcactaagcaacagttcagaaa-aggctgattaaggttcacttcgcttaagcgacggctagttcgcttaagcgacc 41111312  T
Q  379 ggcttacagtaggt-ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcaca 472  Q
     ||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||    
T  41111313 agcttacagtaggttctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatgaaaatggtttttcgctcaca 41111407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 293 - 455
Target Start/End: Original strand, 21705625 - 21705785
Alignment:
Q  293 gtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggt 392  Q
    ||||||| ||| ||||||||| | |||||||| |||||| ||||  |||| ||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  21705625 gtcccctagtgtacgaagcaaga-ttcagaaa-aggctgtctaacactcagttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggt 21705722  T
Q  393 ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaa 455  Q
    |||||||||| |||||||||| |||||||||| |||||| |||||| |  || ||||||||||    
T  21705723 ctgggttcagttcgcttacgggtcgctcacggctcgcttaagcgaattcttggcagaatcaaa 21705785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 293 - 455
Target Start/End: Original strand, 21710167 - 21710328
Alignment:
Q  293 gtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggt 392  Q
    ||||||| ||| ||||||||| | ||| |||| |||||| ||||  |||| ||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  21710167 gtcccctagtgtacgaagcaaga-ttcggaaaaaggctgtctaacactcagttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggt 21710265  T
Q  393 ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaa 455  Q
    |||||||||| ||||||| ||||||||||||| |||||| |||||| |  || ||||||||||    
T  21710266 ctgggttcagttcgcttatggttcgctcacggctcgcttaagcgaattcttggcagaatcaaa 21710328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 293 - 455
Target Start/End: Complemental strand, 20851838 - 20851678
Alignment:
Q  293 gtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggt 392  Q
    ||||||| ||| ||||||||| | |||||||| |||||| ||||  |||| ||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  20851838 gtcccctagtgtacgaagcaaga-ttcagaaa-aggctgtctaacactcagttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggt 20851741  T
Q  393 ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaa 455  Q
    |||||||||| ||||||| || |||||||||| |||||| |||||| |  || ||||||||||    
T  20851740 ctgggttcagttcgcttatgggtcgctcacggctcgcttaagcgaattcttggcagaatcaaa 20851678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 317 - 455
Target Start/End: Complemental strand, 20858442 - 20858305
Alignment:
Q  317 ttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttc 416  Q
    |||||||| |||||| ||||  |||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||| ||    
T  20858442 ttcagaaa-aggctgtctaacactcagttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggtctgggttcagttcgcttacgggtc 20858344  T
Q  417 gctcacggttcgcttgagcgaacttctgacagaatcaaa 455  Q
    |||||||| |||||| |||||| |  || ||||||||||    
T  20858343 gctcacggctcgcttaagcgaattcttggcagaatcaaa 20858305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 237 - 440
Target Start/End: Original strand, 19961481 - 19961684
Alignment:
Q  237 tgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgacta 335  Q
    |||| ||||||||||||||||||||| |||| |||| |  | | ||| ||||| | | |||||| |||||||||||||| ||||||| ||||||||||||    
T  19961481 tgatgcctatacaagggttatacaagctaaaagaaacacgtaaaaatactcaaaagggtcccctagtgcacgaagcaaa-gttcagatagaggctgacta 19961579  T
Q  336 aggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttc-agctcgcttacggttcgctcacggttcgcttgag 434  Q
    |||||||  |||||||||||| || ||| |||||||| ||||| || ||||| | || ||| |||  ||||||| ||||||||||  ||||||||| |||    
T  19961580 aggctcatctcgcttaagcgaagggtagctcgcttaagcgaccagc-tacaggaagtttggattctcgctcgctcacggttcgcttgcggttcgctcgag 19961678  T
Q  435 cgaact 440  Q
    ||||||    
T  19961679 cgaact 19961684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 294 - 419
Target Start/End: Original strand, 18712098 - 18712223
Alignment:
Q  294 tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca-cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggt 392  Q
    |||||| |||||||| ||||||||||| || | |||||||||||| ||| |||||||||||||||||||||||||||||| ||||| |||||||| | ||    
T  18712098 tcccctagtgcacgaggcaaaagttcaaaaggtggctgactaagg-tcatcttcgcttaagcgacggctagttcgcttaagcgaccagcttacagaaagt 18712196  T
Q  393 ctgggttcagctcgcttacggttcgct 419  Q
      |||||| ||||||| ||||| ||||    
T  18712197 tggggttccgctcgctaacggtacgct 18712223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 88 - 145
Target Start/End: Complemental strand, 20941714 - 20941657
Alignment:
Q  88 aacaatccagaacatacacaattaattatgattatgcgcatacatcaatttcattcaa 145  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  20941714 aacaatccagaacatacacaattaattataattatgctcatacatcaatttcattcaa 20941657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 20 - 136
Target Start/End: Original strand, 41110997 - 41111112
Alignment:
Q  20 acctgtgtatatctacatacaactcaactac-acatatattccatatgacttactactccgagaattctaacaatccagaacatacacaattaattatga 118  Q
    ||||||||||||||||||||||||| || || |||||| |  |||||||||||||||||| | || || |||||||||| || |||||||||| |||| |    
T  41110997 acctgtgtatatctacatacaactcgaccactacatatgtatcatatgacttactactcc-acaactcaaacaatccag-acttacacaattatttataa 41111094  T
Q  119 ttatgcgcatacatcaat 136  Q
    |||||| |||||||||||    
T  41111095 ttatgcacatacatcaat 41111112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 244 - 449
Target Start/End: Complemental strand, 22030504 - 22030298
Alignment:
Q  244 tatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca 342  Q
    ||||||| ||||||||||||| || |||| ||| |||||||||||| | | |  ||| ||||| ||||||||| || | |||| ||||||||||| |       
T  22030504 tatacaaaggttatacaagttgaaagaaacattatagaatgctcaaaaggatttcctagtgcaagaagcaaaaattaa-aaagtggctgactaagacctt 22030406  T
Q  343 cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacgg-ttcgctcacggttcgcttgagcgaactt 441  Q
    |||||||||||||| |||| | |||||||| |||| |||||||||   ||  | |||| ||||||| | || |||||||||||||||||  |||||||||    
T  22030405 cttcgcttaagcgaaggctggctcgcttaagcgactggcttacagagagttggtgttctgctcgctaagggtttcgctcacggttcgctcaagcgaactt 22030306  T
Q  442 ctgacaga 449  Q
    ||| ||||    
T  22030305 ctggcaga 22030298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 19 - 47
Target Start/End: Original strand, 21542237 - 21542265
Alignment:
Q  19 aacctgtgtatatctacatacaactcaac 47  Q
    |||||||||||||||||||||||||||||    
T  21542237 aacctgtgtatatctacatacaactcaac 21542265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 19 - 47
Target Start/End: Complemental strand, 42095899 - 42095871
Alignment:
Q  19 aacctgtgtatatctacatacaactcaac 47  Q
    |||||||||||||||||||||||||||||    
T  42095899 aacctgtgtatatctacatacaactcaac 42095871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 90; Significance: 3e-43; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 239 - 419
Target Start/End: Original strand, 30194 - 30374
Alignment:
Q  239 atacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaag 337  Q
    |||||||||||||||||||||||||| || |||| |||||||||||||||| | | |||||| ||||||||||||||| ||||||||| |||||||||||    
T  30194 atacctatacaagggttatacaagttgaaagaaacattttagaatgctcaaaagggtcccctagtgcacgaagcaaaa-ttcagaaagtggctgactaag 30292  T
Q  338 gctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgct 419  Q
    ||||||||||||||||||| || | | |||||||| |||||||||||||| | || | ||||  ||||||| ||||||||||    
T  30293 gctcacttcgcttaagcgaaggttggctcgcttaagcgaccggcttacagaaagtttaggtttcgctcgctcacggttcgct 30374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 87; Significance: 2e-41; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 293 - 455
Target Start/End: Complemental strand, 4377 - 4217
Alignment:
Q  293 gtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggt 392  Q
    ||||||| ||||||||||||| | |||||||| ||||||||||| ||||| ||||||||||||| ||||||||||||||| ||||| |||||||||||||    
T  4377 gtcccctagtgcacgaagcaaga-ttcagaaa-aggctgactaacgctcagttcgcttaagcgatggctagttcgcttaagcgaccagcttacagtaggt 4280  T
Q  393 ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaa 455  Q
    |||||||||| |||||||||| |||||||||| |||||| |||||| |  || ||||||||||    
T  4279 ctgggttcagttcgcttacgggtcgctcacggctcgcttaagcgaattcttggcagaatcaaa 4217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 80; Significance: 3e-37; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 313 - 474
Target Start/End: Original strand, 10679 - 10829
Alignment:
Q  313 aaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacg 412  Q
    |||||||| |||| |||||||||||    |||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||| ||||||||       
T  10679 aaagttcaaaaagtggctgactaagatcaacttcgcttaagcgacggctagctcgcttaagcgaccggcttacagtaagtctgggttctgctcgctt--- 10775  T
Q  413 gttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 474  Q
            | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10776 --------agggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 10829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 79; Significance: 1e-36; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 301 - 455
Target Start/End: Complemental strand, 80189 - 80036
Alignment:
Q  301 gtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttc 400  Q
    |||||||||||||  ||||||||| |||||||||||  |||| |||||||||||||||||||| |||||||| |||||  ||||||||||||||||||||    
T  80189 gtgcacgaagcaag-gttcagaaaaaggctgactaacactcagttcgcttaagcgacggctagctcgcttaagcgaccatcttacagtaggtctgggttc 80091  T
Q  401 agctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaa 455  Q
    || |||||||||| |||||||||| |||||| |||||| |  || ||||||||||    
T  80090 agttcgcttacgggtcgctcacggctcgcttaagcgaattcttggcagaatcaaa 80036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 150 - 450
Target Start/End: Complemental strand, 82063 - 81764
Alignment:
Q  150 tatatattcacttgattcctcactcaatcatctccaaaattcactaacattaaccaattcgatcaccggcttgttctagtatgattctgatacctataca 249  Q
    |||||||||||||| || |  |||||| ||| |||||||||||||||  | |||||||||||  |||    ||||  |||| ||||| | | | ||||||    
T  82063 tatatattcacttggtttcatactcaaacatatccaaaattcactaaattcaaccaattcgactaccaatgtgtttaagtaggattcag-tgcatataca 81965  T
Q  250 agggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgc 348  Q
    ||||||||||||||| || |||| |||||| ||||||||| | | | |||| ||| ||||||||||| |||| |||| ||||||||||| |  |||||||    
T  81964 agggttatacaagttgaaagaaacattttaaaatgctcaaaaggattccctggtgtacgaagcaaaa-ttcaaaaagtggctgactaagacctacttcgc 81866  T
Q  349 ttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacag 448  Q
    ||||||||||||| | |||||||| |||||| |||||||   ||   ||||  ||||||| || ||||||| ||||||||||| |||||||||||| |||    
T  81865 ttaagcgacggctggctcgcttaagcgaccgacttacagagagttgaggtttcgctcgctaacagttcgcttacggttcgcttaagcgaacttctggcag 81766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 76; Significance: 7e-35; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 368 - 471
Target Start/End: Complemental strand, 1446 - 1343
Alignment:
Q  368 cttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgc 467  Q
    ||||| ||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||  |||||||||||||| |||||||||    
T  1446 cttaagcgaccagcttacagtaggtctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatcaaaattgtttttcgc 1347  T
Q  468 tcac 471  Q
    ||||    
T  1346 tcac 1343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 71; Significance: 7e-32; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 244 - 449
Target Start/End: Original strand, 1117 - 1322
Alignment:
Q  244 tatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca 342  Q
    ||||||| ||||||||||||| || |||| |||||| ||||||||| | | |||||| ||||||||||||||| |||| |||| ||||||||||| | |     
T  1117 tatacaaaggttatacaagttgaaagaaacattttaaaatgctcaaaaggatcccctagtgcacgaagcaaaa-ttcaaaaagtggctgactaagaccct 1215  T
Q  343 cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttc 442  Q
    ||||||||||||||||||| | |||||||| ||||||||| ||||   ||  || ||| ||||||| | || ||  ||||||||||||| ||||||||||    
T  1216 cttcgcttaagcgacggctggctcgcttaagcgaccggctcacagagagttgggtttccgctcgctaatggctcaatcacggttcgcttaagcgaacttc 1315  T
Q  443 tgacaga 449  Q
    |||||||    
T  1316 tgacaga 1322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 294 - 477
Target Start/End: Original strand, 16121 - 16303
Alignment:
Q  294 tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca-cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggt 392  Q
    |||||| |||||||| ||||| ||||| |||| |||||||||||| ||| ||||||||||||||||| ||| |||||||| |||||||||||||| | ||    
T  16121 tcccctagtgcacgaggcaaa-gttcaaaaagtggctgactaagg-tcatcttcgcttaagcgacggttagctcgcttaagcgaccggcttacagaaagt 16218  T
Q  393 ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacaggttc 477  Q
      |||||| ||||||| ||||||||||  ||||||| || ||||||||||||||| ||| ||| || ||||||||| || |||||    
T  16219 tggggttccgctcgctaacggttcgcttgcggttcggttaagcgaacttctgacataatgaaattgatttttcgcttacgggttc 16303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 88 - 218
Target Start/End: Complemental strand, 7667 - 7537
Alignment:
Q  88 aacaatccagaacatacacaattaattatgattatgcgcatacatcaatttcattcaata-gttatatattcacttgattcctcactcaatcatctccaa 186  Q
    ||||| ||||||||||| ||||||||||| ||||||| |||||||||||||||||||| |   ||||||||||||||||| |  ||||||||||||||||    
T  7667 aacaacccagaacatacccaattaattataattatgctcatacatcaatttcattcaacatactatatattcacttgatttcatactcaatcatctccaa 7568  T
Q  187 aattcactaacattaaccaattcgatcaccgg 218  Q
    ||||||||||| | ||| ||||||||||||||    
T  7567 aattcactaac-tcaactaattcgatcaccgg 7537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 65; Significance: 3e-28; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 237 - 439
Target Start/End: Complemental strand, 493791 - 493588
Alignment:
Q  237 tgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgacta 335  Q
    |||| |||||||||| |||||||||| |||| |||| |||| | ||| ||||| | | |||||| |||||||||||||  ||||||||| ||||||||||    
T  493791 tgatgcctatacaagagttatacaagctaaaagaaacatttaaaaatactcaaaagggtcccctagtgcacgaagcaag-gttcagaaaaaggctgacta 493693  T
Q  336 aggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttc-agctcgcttacggttcgctcacggttcgcttgag 434  Q
    ||||||| ||||||||||||| || ||| |||||||| ||||| ||  |||  ||||   |||||  ||||||| ||||||||||||| |||||||||||    
T  493692 aggctcagttcgcttaagcgaagggtagctcgcttaagcgaccagcacacaaaaggttgaggttctcgctcgctcacggttcgctcacagttcgcttgag 493593  T
Q  435 cgaac 439  Q
    |||||    
T  493592 cgaac 493588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 136
Target Start/End: Complemental strand, 174557 - 174440
Alignment:
Q  19 aacctgtgtatatctacatacaactcaactac-acatatattccatatgacttactactccgagaattctaacaatccagaacatacacaattaattatg 117  Q
    ||||| ||||| ||||||||||| || ||||  |||||| || || |||||||||| |||||  || || |||||||||||||||||||||||| ||||     
T  174557 aacctttgtatctctacatacaattcgactattacatatttttcaaatgacttactgctccgc-aactcaaacaatccagaacatacacaattatttata 174459  T
Q  118 attatgcgcatacatcaat 136  Q
    ||||||| |||||||||||    
T  174458 attatgcacatacatcaat 174440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 387
Target Start/End: Original strand, 525062 - 525204
Alignment:
Q  244 tatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag--tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctc 341  Q
    ||||||| ||||||||||||| || |||| |||| |||||||||| || |  | |||| ||||| ||| |||||  ||| || | ||||||| |||||      
T  525062 tatacaaaggttatacaagttgaaagaaacatttcagaatgctca-gatggattccctagtgcaggaaacaaaa--tcaaaatgtggctgaccaaggcct 525158  T
Q  342 acttcgcttaagcgacggctagttcgcttaatcgaccggcttacag 387  Q
     |||||||||||||| |||| |||||||||| |||||| |||||||    
T  525159 tcttcgcttaagcgaaggctggttcgcttaagcgaccgtcttacag 525204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 64; Significance: 1e-27; HSPs: 2)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 252 - 477
Target Start/End: Original strand, 663 - 888
Alignment:
Q  252 ggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca-cttcgct 349  Q
    |||||||||| || || |||| |||||  ||||||||| | | ||||||  ||||||| ||||| ||||| |||| |||||||||||| ||| |||||||    
T  663 ggttatacaaattgaaagaaacattttttaatgctcaaaaggatcccctaatgcacgaggcaaa-gttcaaaaagtggctgactaagg-tcatcttcgct 760  T
Q  350 taagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacaga 449  Q
    |||||||||||| |||||||||| ||||||||||||||   ||  |||||   |||||| ||| ||||||  |||||||||| |||||||||||||||||    
T  761 taagcgacggctggttcgcttaagcgaccggcttacagagagttggggtttccctcgctaacgtttcgcttgcggttcgcttaagcgaacttctgacaga 860  T
Q  450 atcaaaatggtttttcgctcacaggttc 477  Q
    ||  ||||| ||||||||| || |||||    
T  861 atggaaatgatttttcgcttacgggttc 888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 451
Target Start/End: Original strand, 875 - 923
Alignment:
Q  404 tcgcttacgg-ttcgctcacggttcgcttgagcgaacttctgacagaat 451  Q
    |||||||||| |||||||||||||||||||||||| | |||||||||||    
T  875 tcgcttacgggttcgctcacggttcgcttgagcgagcgtctgacagaat 923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 316 - 438
Target Start/End: Complemental strand, 3976 - 3854
Alignment:
Q  316 gttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggtt 415  Q
    ||||| |||| ||||||||||||   ||||||||||||||||| ||||||||||||| |||||||||||||||  |||||||||| ||||  ||||||||    
T  3976 gttcaaaaagtggctgactaaggtcaacttcgcttaagcgacgtctagttcgcttaagcgaccggcttacagtgagtctgggttctgctcaattacggtt 3877  T
Q  416 cgctcacggttcgcttgagcgaa 438  Q
    ||||  |||||||||| ||||||    
T  3876 cgcttgcggttcgcttaagcgaa 3854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0232 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 244 - 449
Target Start/End: Complemental strand, 19166 - 18961
Alignment:
Q  244 tatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca 342  Q
    ||||||| ||||||| ||||| || |||| |||||| ||||||||| | | |||||| ||||||||||||||| |||| |||| ||||||||||| | |     
T  19166 tatacaaaggttatataagttgaaagaaacattttaaaatgctcaaaaggatcccctagtgcacgaagcaaaa-ttcaaaaagtggctgactaagaccct 19068  T
Q  343 cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttc 442  Q
    ||||||||| | ||||||| | ||| |||| |||| |||| ||||   ||  |||||| ||||||| | || ||||||||||||||||| ||||||||||    
T  19067 cttcgcttaggagacggctggctcggttaagcgactggctcacagacagttggggttccgctcgctaatggctcgctcacggttcgcttaagcgaacttc 18968  T
Q  443 tgacaga 449  Q
    |||||||    
T  18967 tgacaga 18961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 275 - 439
Target Start/End: Original strand, 17497 - 17661
Alignment:
Q  275 ttttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaat 373  Q
    ||||||||||||||| | | || ||| ||||||||| ||||| ||||||||| ||||||| |||||||||||||||||||||| |||| | ||||||||     
T  17497 ttttagaatgctcaaaaggctcgcctagtgcacgaaacaaaa-ttcagaaagtggctgaccaaggctcacttcgcttaagcgaaggctggctcgcttaag 17595  T
Q  374 cgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaac 439  Q
    |||||||||||||| | || ||||||  ||||||| || |||||||  ||| || |||||||||||    
T  17596 cgaccggcttacagaaagtttgggtttcgctcgctcacagttcgcttgcgggtctcttgagcgaac 17661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 62; Significance: 2e-26; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 362 - 455
Target Start/End: Original strand, 134867 - 134960
Alignment:
Q  362 agttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaa 455  Q
    ||||||||||| ||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||| |  |||||||||||||    
T  134867 agttcgcttaagcgaccagcttacagtaggtctgggttcagttcgcttacgggtcgctcacggttcgcttaagcgaattcttgacagaatcaaa 134960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 293 - 357
Target Start/End: Original strand, 134820 - 134882
Alignment:
Q  293 gtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgac 357  Q
    ||||||| ||||||||||||| | |||||||| ||||||||||| ||||| ||||||||||||||    
T  134820 gtcccctagtgcacgaagcaaga-ttcagaaa-aggctgactaacgctcagttcgcttaagcgac 134882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 58; Significance: 4e-24; HSPs: 2)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 294 - 477
Target Start/End: Complemental strand, 752 - 581
Alignment:
Q  294 tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca-cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggt 392  Q
    |||||| |||||||| ||||| ||||| |||| |||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||| | ||    
T  752 tcccctagtgcacgacgcaaa-gttcaaaaagtggctgactaagg-tcatcttcgcttaagcgacggctagttcgcttaagcgaccggcttacagaaagt 655  T
Q  393 ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacaggttc 477  Q
      |||||    ||||       ||||| ||||||||||||||||||||||||||||||| ||| || ||||||||| || |||||    
T  654 tggggtt----tcgc-------tcgctgacggttcgcttgagcgaacttctgacagaatgaaattgatttttcgcttacgggttc 581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 294 - 378
Target Start/End: Complemental strand, 7688 - 7605
Alignment:
Q  294 tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca-cttcgcttaagcgacggctagttcgcttaatcgacc 378  Q
    |||||| |||||||| ||||| ||||| |||| |||||||||||| ||| |||||||||||||||||||||||||||||| |||||    
T  7688 tcccctagtgcacgacgcaaa-gttcaaaaagtggctgactaagg-tcatcttcgcttaagcgacggctagttcgcttaagcgacc 7605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 295 - 419
Target Start/End: Original strand, 6861 - 6983
Alignment:
Q  295 cccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca-cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtc 393  Q
    ||||| |||||||| ||||| ||||| |||| |||||||| ||| ||| ||||||||||||||||||||| |||||||| |||||||||||||||| |||    
T  6861 cccctagtgcacgaggcaaa-gttca-aaagtggctgactgagg-tcatcttcgcttaagcgacggctagctcgcttaagcgaccggcttacagtaagtc 6957  T
Q  394 tgggttcagctcgcttacggttcgct 419  Q
    ||||||| ||||||||||| ||||||    
T  6958 tgggttctgctcgcttacgattcgct 6983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 58; Significance: 4e-24; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 244 - 419
Target Start/End: Complemental strand, 129393 - 129217
Alignment:
Q  244 tatacaagggttatacaagttaaaggaaatattttagaa-tgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctc 341  Q
    ||||||| ||||||||||||| ||||||| |||| | || ||||||| | | |||||| ||||||||||||||| |||| |||| ||||||||||| |      
T  129393 tatacaaaggttatacaagttgaaggaaacatttcaaaaatgctcaaaaggatcccctagtgcacgaagcaaaa-ttcaaaaagtggctgactaagacct 129295  T
Q  342 acttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgct 419  Q
     ||||||||||||||||||| | |||||||| ||||||||| |||| | ||  |||||| ||||||| ||||||||||    
T  129294 tcttcgcttaagcgacggctggctcgcttaagcgaccggctcacagaaagttggggttccgctcgctaacggttcgct 129217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 252 - 387
Target Start/End: Original strand, 116173 - 116308
Alignment:
Q  252 ggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca-cttcgct 349  Q
    ||||||||| ||| || |||| |||||| ||| ||||| | | |||||| |||||||| ||||| ||||| |||  |||||||||||| ||| |||||||    
T  116173 ggttatacaggttgaaagaaacattttaaaatactcaaaaggatcccctagtgcacgaggcaaa-gttcaaaaaatggctgactaagg-tcatcttcgct 116270  T
Q  350 taagcgacggctagttcgcttaatcgaccggcttacag 387  Q
    |||||||||||| |||||||||| ||||||||||||||    
T  116271 taagcgacggctggttcgcttaagcgaccggcttacag 116308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 415 - 477
Target Start/End: Original strand, 116325 - 116388
Alignment:
Q  415 tcgctcacggttcgcttgagcgaacttctgacagaat-caaaatggtttttcgctcacaggttc 477  Q
    ||||| |||||||||||||||||||||||||||||||  |||||| ||||||||| || |||||    
T  116325 tcgctaacggttcgcttgagcgaacttctgacagaatgaaaaatgatttttcgcttacgggttc 116388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 57; Significance: 2e-23; HSPs: 4)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 150 - 417
Target Start/End: Original strand, 65311 - 65577
Alignment:
Q  150 tatatattcacttgattcctcactcaatcatctccaaaattcactaacattaaccaattcgatcaccggcttgttctagtatgattctgatacctataca 249  Q
    |||||||||||||| || |  |||||||||  |||||||||||||||  |||||||||||||| |||    |||| ||||| ||||| | | | |||| |    
T  65311 tatatattcacttggtttcatactcaatcaaatccaaaattcactaaacttaaccaattcgattaccaatgtgttttagtaggattcag-tgcatatata 65409  T
Q  250 agggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgc 348  Q
    |  |||||||||||| || |||| |||||| |||| |||| | | |||||| |||||||| |||||| |||| |||| ||||||||||||    || |||    
T  65410 aaagttatacaagttgaaagaaacattttaaaatgttcaaaaggatcccctagtgcacgaggcaaaa-ttcaaaaagtggctgactaaggtcttctccgc 65508  T
Q  349 ttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcg 417  Q
    ||||| ||||||| |||||||||| ||||||||||||||   ||  |||||| ||||||| ||||||||    
T  65509 ttaagtgacggctggttcgcttaagcgaccggcttacagagagttggggttccgctcgctaacggttcg 65577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 344 - 449
Target Start/End: Original strand, 1467 - 1572
Alignment:
Q  344 ttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttct 443  Q
    ||||||||||||| |||| | |||||||| ||||||||| ||||   ||  |||||| |||||||   || ||||||||||||||||| || ||||||||    
T  1467 ttcgcttaagcgaaggctggctcgcttaagcgaccggctgacagagagttggggttccgctcgctactggctcgctcacggttcgcttaagtgaacttct 1566  T
Q  444 gacaga 449  Q
    ||||||    
T  1567 gacaga 1572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 19 - 47
Target Start/End: Complemental strand, 46975 - 46947
Alignment:
Q  19 aacctgtgtatatctacatacaactcaac 47  Q
    |||||||||||||||||||||||||||||    
T  46975 aacctgtgtatatctacatacaactcaac 46947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 19 - 47
Target Start/End: Complemental strand, 52380 - 52352
Alignment:
Q  19 aacctgtgtatatctacatacaactcaac 47  Q
    |||||||||||||||||||||||||||||    
T  52380 aacctgtgtatatctacatacaactcaac 52352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 293 - 439
Target Start/End: Complemental strand, 11258 - 11112
Alignment:
Q  293 gtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggt 392  Q
    ||||||| |||||||||||||  ||||||||| ||||||||||||||||| ||||||||||||| || ||  |||||||| ||||| ||| |||  ||||    
T  11258 gtcccctagtgcacgaagcaag-gttcagaaaaaggctgactaaggctcagttcgcttaagcgaagggtatctcgcttaagcgaccagctcacaaaaggt 11160  T
Q  393 ctgggttc-agctcgcttacggttcgctcacggttcgcttgagcgaac 439  Q
       |||||  ||||||| ||||||||||||| ||||||||||||||||    
T  11159 tgtggttctcgctcgctcacggttcgctcacagttcgcttgagcgaac 11112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 56; Significance: 6e-23; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 244 - 449
Target Start/End: Original strand, 121200 - 121406
Alignment:
Q  244 tatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca 342  Q
    ||||||| ||||||||||||| || |||| |||||| ||||||||| | | | |||| |||||||||||||||| ||| |||| ||||||||||| |       
T  121200 tatacaaaggttatacaagttgaaagaaacattttaaaatgctcaaaaggattccctagtgcacgaagcaaaag-tcaaaaagtggctgactaagacctt 121298  T
Q  343 cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgctta-cggttcgctcacggttcgcttgagcgaactt 441  Q
    |||||||||||||| |||| | |||||||| | ||||||||||||   ||  | |||| ||||||| |  |||||||||||||||||||  |||||||||    
T  121299 cttcgcttaagcgaaggctggctcgcttaagcaaccggcttacagagagttggtgttctgctcgctaaggggttcgctcacggttcgctcaagcgaactt 121398  T
Q  442 ctgacaga 449  Q
    ||| ||||    
T  121399 ctggcaga 121406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 244 - 449
Target Start/End: Original strand, 132077 - 132283
Alignment:
Q  244 tatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca 342  Q
    ||||||| ||||||||||||| || |||| |||||| ||||||||| | | | |||| |||||||||||||||| ||| |||| ||||||||||| |       
T  132077 tatacaaaggttatacaagttgaaagaaacattttaaaatgctcaaaaggattccctagtgcacgaagcaaaag-tcaaaaagtggctgactaagacctt 132175  T
Q  343 cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgctta-cggttcgctcacggttcgcttgagcgaactt 441  Q
    |||||||||||||| |||| | |||||||| | ||||||||||||   ||  | |||| ||||||| |  |||||||||||||||||||  |||||||||    
T  132176 cttcgcttaagcgaaggctggctcgcttaagcaaccggcttacagagagttggtgttctgctcgctaaggggttcgctcacggttcgctcaagcgaactt 132275  T
Q  442 ctgacaga 449  Q
    ||| ||||    
T  132276 ctggcaga 132283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 237 - 440
Target Start/End: Complemental strand, 11773 - 11569
Alignment:
Q  237 tgatacctatacaagggttatacaagttaaaggaaatattttagaa-tgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgact 334  Q
    |||| ||||||||||||||||||||| |||| |||| | || | || | ||||| | | |||||| ||||| |||||||| ||||||| |||||||||||    
T  11773 tgatgcctatacaagggttatacaagctaaaagaaaaacttaaaaaatactcaaaagggtcccctagtgcatgaagcaaa-gttcagatagaggctgact 11675  T
Q  335 aaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttc-agctcgcttacggttcgctcacggttcgcttga 433  Q
    ||||||||  |||||||||||| || |||||||||||| ||||| || ||||| | || ||| |||  ||||||| |||| |||||  ||||||||| ||    
T  11674 aaggctcagctcgcttaagcgaagggtagttcgcttaagcgaccagc-tacaggaagtttggattctcgctcgctcacggatcgcttgcggttcgctcga 11576  T
Q  434 gcgaact 440  Q
    |||||||    
T  11575 gcgaact 11569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 51; Significance: 6e-20; HSPs: 3)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 329 - 419
Target Start/End: Complemental strand, 4281 - 4191
Alignment:
Q  329 ctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgct 419  Q
    ||||||||||   ||||||||||||||||| ||||||||||||| ||| | |||||||||| |||||||||| ||||| ||||||||||||    
T  4281 ctgactaaggtcaacttcgcttaagcgacgtctagttcgcttaagcgatcagcttacagtaagtctgggttctgctcgattacggttcgct 4191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 88 - 140
Target Start/End: Complemental strand, 18024 - 17972
Alignment:
Q  88 aacaatccagaacatacacaattaattatgattatgcgcatacatcaatttca 140  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  18024 aacaatccagaacatacacaattaattataattatgctcatacatcaatttca 17972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 88 - 140
Target Start/End: Complemental strand, 23657 - 23605
Alignment:
Q  88 aacaatccagaacatacacaattaattatgattatgcgcatacatcaatttca 140  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  23657 aacaatccagaacatacacaattaattataattatgctcatacatcaatttca 23605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 49; Significance: 9e-19; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 237 - 439
Target Start/End: Complemental strand, 24333 - 24131
Alignment:
Q  237 tgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgacta 335  Q
    |||| |||| |||||||||||||||| |||| |||| | || | ||  ||||| | | |||||| |||||||||||||| |||||||||||| |||||||    
T  24333 tgatgcctacacaagggttatacaagctaaaagaaacacttaaaaacactcaaaagggtcccctagtgcacgaagcaaa-gttcagaaagagactgacta 24235  T
Q  336 aggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttc-agctcgcttacggttcgctcacggttcgcttgag 434  Q
    |||||||  |||||||||||| || ||| |||||||| ||||| ||| |||  |||| ||| |||  ||| ||| || |||||||| | |||||||||||    
T  24234 aggctcatctcgcttaagcgaaggatagctcgcttaagcgaccagctcacaaaaggt-tggattctcgcttgctcacagttcgctcgcagttcgcttgag 24136  T
Q  435 cgaac 439  Q
    |||||    
T  24135 cgaac 24131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 403 - 439
Target Start/End: Complemental strand, 24106 - 24070
Alignment:
Q  403 ctcgcttacggttcgctcacggttcgcttgagcgaac 439  Q
    ||||||||||||||||||||||||||||| |||||||    
T  24106 ctcgcttacggttcgctcacggttcgcttaagcgaac 24070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 48; Significance: 4e-18; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 313 - 419
Target Start/End: Complemental strand, 35014 - 34908
Alignment:
Q  313 aaagttcagaaagaggctgactaaggctca-cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttac 411  Q
    |||||||| |||| |||||||||||| ||| |||||||||||||| ||||||||||||||| |||||||||||||| | ||   ||||| ||||||| ||    
T  35014 aaagttcaaaaagtggctgactaagg-tcatcttcgcttaagcgatggctagttcgcttaagcgaccggcttacagaaagttgaggttccgctcgctgac 34916  T
Q  412 ggttcgct 419  Q
    ||||||||    
T  34915 ggttcgct 34908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 421 - 477
Target Start/End: Complemental strand, 34917 - 34861
Alignment:
Q  421 acggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacaggttc 477  Q
    ||||||||||||||||||||||||||||||| ||| || ||||||||| || |||||    
T  34917 acggttcgcttgagcgaacttctgacagaatgaaattgatttttcgcttacgggttc 34861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 46; Significance: 6e-17; HSPs: 2)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 88 - 145
Target Start/End: Complemental strand, 1584 - 1527
Alignment:
Q  88 aacaatccagaacatacacaattaattatgattatgcgcatacatcaatttcattcaa 145  Q
    ||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||    
T  1584 aacaatccagaacatacacaattaattaaaattatgctcatacatcaatttcattcaa 1527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 3107 - 3163
Alignment:
Q  23 tgtgtatatctacatacaactcaactacacatatattc-catatgacttactactcc 78  Q
    ||||||||||||||||||||||||| | |||||||| | |||||||||||| |||||    
T  3107 tgtgtatatctacatacaactcaaccatacatatatgcacatatgacttacaactcc 3163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 252 - 449
Target Start/End: Original strand, 51552 - 51749
Alignment:
Q  252 ggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgctt 350  Q
    ||||||||||||| || |||| |||||| ||||||||| | | | |||| |||||| |||||||| |||| |||| ||||||||||| |   ||||||||    
T  51552 ggttatacaagttgaaagaaacattttaaaatgctcaaaaggattccctagtgcacaaagcaaaa-ttcaaaaagtggctgactaagaccttcttcgctt 51650  T
Q  351 aagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacaga 449  Q
    ||||||||||| | ||||||||  |||| ||| | ||   ||   ||||  ||||||| |||||||||  ||||||||||| |||||||||||| ||||    
T  51651 aagcgacggctggctcgcttaagtgaccagctcatagagagttgaggtttcgctcgctaacggttcgcatacggttcgcttaagcgaacttctggcaga 51749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 3)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 313 - 419
Target Start/End: Complemental strand, 23332 - 23226
Alignment:
Q  313 aaagttcagaaagaggctgactaaggctca-cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttac 411  Q
    |||||||| |||| |||||||||||| ||| ||||||||||||||||||||| |||||||  | ||||||| |||| | ||  ||||||| |||||| ||    
T  23332 aaagttcaaaaagtggctgactaagg-tcatcttcgcttaagcgacggctagctcgcttaggcaaccggctcacagaaagttggggttcaactcgctgac 23234  T
Q  412 ggttcgct 419  Q
    ||||||||    
T  23233 ggttcgct 23226  T

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Target: scaffold0235; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 415 - 464
Target Start/End: Complemental strand, 15524 - 15475
Alignment:
Q  415 tcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggttttt 464  Q
    ||||| |||||||||||||||||||||||| |||||| ||||||||||||    
T  15524 tcgctgacggttcgcttgagcgaacttctggcagaatgaaaatggttttt 15475  T

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Target: scaffold0235; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 419
Target Start/End: Complemental strand, 15633 - 15509
Alignment:
Q  294 tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca-cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggt 392  Q
    |||||| |||||||| |||||  |||| |||| |||||||||||| ||| |||||||||||||| |||||| || ||||| |||| |||| |||| | ||    
T  15633 tcccctagtgcacgaggcaaat-ttcaaaaagtggctgactaagg-tcatcttcgcttaagcgatggctagctcacttaagcgactggctcacagaaagt 15536  T
Q  393 ctgggttcagctcgcttacggttcgct 419  Q
      |||||| ||||||| ||||||||||    
T  15535 tggggttccgctcgctgacggttcgct 15509  T

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Target: scaffold0139 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 150 - 478
Target Start/End: Complemental strand, 15835 - 15521
Alignment:
Q  150 tatatattcacttgattcctcactcaatcatctccaaaattcactaacattaaccaattcgatcaccggcttgttctagtatgattctgatacctataca 249  Q
    ||||| |||||||| || |  ||||||||||||||||| ||||||||  | ||| |||||||| |||    ||||  |||||||||| | | | |||| |    
T  15835 tatatgttcacttggtttcatactcaatcatctccaaa-ttcactaaactcaactaattcgattaccaaagtgtttcagtatgattcag-tgcatatata 15738  T
Q  250 agggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca-cttcg 347  Q
    | ||||||||||||| || |||| |||||  ||||||||| | | || ||| |||||||| ||||| ||||| |||| |||||||||||| ||| |||||    
T  15737 aaggttatacaagttgaaagaaacatttttaaatgctcaaaaggatctcctagtgcacgaggcaaa-gttca-aaagtggctgactaagg-tcatcttcg 15641  T
Q  348 cttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgaca 447  Q
    |||||||||||| | |||||||||| |||||| |||| ||   || ||||||    |||       |||||| |||||||||||||||||||||||||||    
T  15640 cttaagcgacggttggttcgcttaagcgaccgtcttatagagagtttgggtt----tcg-------ttcgctaacggttcgcttgagcgaacttctgaca 15552  T
Q  448 gaatcaaaatggtttttcgctcacaggttct 478  Q
     |||  ||||| ||||||||| || ||||||    
T  15551 taatggaaatgatttttcgcttacgggttct 15521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 294 - 419
Target Start/End: Complemental strand, 41283 - 41160
Alignment:
Q  294 tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca-cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggt 392  Q
    |||||| |||||||| ||||| ||||| |||| | |||||||||| ||| |||||||||||||||| ||||||||||||| ||| ||||| |||| ||||    
T  41283 tcccctagtgcacgaggcaaa-gttca-aaagtgtctgactaagg-tcatcttcgcttaagcgacgtctagttcgcttaagcgatcggctcacagaaggt 41187  T
Q  393 ctgggttcagctcgcttacggttcgct 419  Q
      |||||| ||||||| || |||||||    
T  41186 tggggttccgctcgctgacagttcgct 41160  T

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Target: scaffold0034 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 293 - 411
Target Start/End: Original strand, 72631 - 72748
Alignment:
Q  293 gtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggt 392  Q
    |||||||  |||||||||||||| ||||||||| |||||||| |||||||  |||||||||||| || ||| |||||||| ||||| ||| |||  ||||    
T  72631 gtcccctaatgcacgaagcaaaaattcagaaagtggctgact-aggctcagctcgcttaagcgaagggtagctcgcttaagcgaccagctcacaaaaggt 72729  T
Q  393 ctgggttcagctcgcttac 411  Q
      |||||  ||||||||||    
T  72730 tggggttttgctcgcttac 72748  T

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Target: scaffold0020 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 294 - 419
Target Start/End: Complemental strand, 102623 - 102499
Alignment:
Q  294 tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca-cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggt 392  Q
    |||||| |||||||| ||||  ||||| |||| ||| |||||||| ||| |||||||||||||| |||| |||||||||| |||||| ||||||| | ||    
T  102623 tcccctagtgcacgaggcaag-gttcaaaaagtggccgactaagg-tcatcttcgcttaagcgatggctggttcgcttaagcgaccgacttacagaaagt 102526  T
Q  393 ctgggttcagctcgcttacggttcgct 419  Q
      |||||| ||||||| ||||||||||    
T  102525 tggggttccgctcgctgacggttcgct 102499  T

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Target: scaffold0006 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 421 - 471
Target Start/End: Original strand, 49595 - 49645
Alignment:
Q  421 acggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcac 471  Q
    |||||||| ||||||||||||  ||||||||||||||||||||||||||||    
T  49595 acggttcgattgagcgaactttggacagaatcaaaatggtttttcgctcac 49645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0720 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 293 - 378
Target Start/End: Complemental strand, 3966 - 3882
Alignment:
Q  293 gtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgacc 378  Q
    ||||||| |||||||||||||  ||||| ||| ||||||||||| ||||| ||||||||||||| || ||| |||||||| |||||    
T  3966 gtcccctagtgcacgaagcaag-gttcaaaaaaaggctgactaatgctcagttcgcttaagcgaagggtagctcgcttaagcgacc 3882  T

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Target: scaffold0206 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 301 - 378
Target Start/End: Original strand, 18045 - 18121
Alignment:
Q  301 gtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgacc 378  Q
    |||||||||||||  ||||||||| ||||||||||||||||| |||||||||||||  | ||| |||||||| |||||    
T  18045 gtgcacgaagcaag-gttcagaaaaaggctgactaaggctcagttcgcttaagcgaaaggtagctcgcttaagcgacc 18121  T

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Target: scaffold1061 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold1061
Description:

Target: scaffold1061; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 256 - 361
Target Start/End: Original strand, 1712 - 1817
Alignment:
Q  256 atacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca-cttcgcttaag 353  Q
    ||||||||| || |||| |||||| ||||||||| | | |||||| |||||||| |||||| |||| |||| |||||||||||| ||| |||||||||||    
T  1712 atacaagttgaaagaaacattttaaaatgctcaaaaggatcccctagtgcacgaggcaaaa-ttcaaaaagtggctgactaagg-tcatcttcgcttaag 1809  T
Q  354 cgacggct 361  Q
    ||||||||    
T  1810 cgacggct 1817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2054 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 378
Target Start/End: Original strand, 14 - 152
Alignment:
Q  240 tacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaagg 338  Q
    |||||||||||| |||||||||| |||| |||| | || | ||| || || | | || ||| |||||||| ||||| |||||||||||||||  ||||||    
T  14 tacctatacaagagttatacaagctaaaagaaacaattaaaaatacttaaaagggtctcctagtgcacgaggcaaa-gttcagaaagaggctagctaagg 112  T
Q  339 ctcacttcgcttaagcgacggctagttcgcttaatcgacc 378  Q
    ||||  |||| ||||||| || ||| |||||||| |||||    
T  113 ctcagctcgcataagcgaagggtagctcgcttaagcgacc 152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 152546 - 152601
Alignment:
Q  23 tgtgtatatctacatacaactcaactacacatatat-tccatatgacttactactc 77  Q
    ||||||||||||||||||||||||| | |||||||| | |||||||||||| ||||    
T  152546 tgtgtatatctacatacaactcaaccatacatatatgtacatatgacttacaactc 152601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 19 - 47
Target Start/End: Complemental strand, 174557 - 174529
Alignment:
Q  19 aacctgtgtatatctacatacaactcaac 47  Q
    |||||||||||||||||||||||||||||    
T  174557 aacctgtgtatatctacatacaactcaac 174529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0535 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 6020 - 5972
Alignment:
Q  25 tgtatatctacatacaactcaactacacatatat-tccatatgacttac 72  Q
    ||||||||||||||||||||||| | |||||||| | ||||||||||||    
T  6020 tgtatatctacatacaactcaaccatacatatatgtacatatgacttac 5972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 23 - 51
Target Start/End: Original strand, 8775 - 8803
Alignment:
Q  23 tgtgtatatctacatacaactcaactaca 51  Q
    |||||||||||||||||||||||||||||    
T  8775 tgtgtatatctacatacaactcaactaca 8803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 244 - 288
Target Start/End: Original strand, 6299 - 6343
Alignment:
Q  244 tatacaagggttatacaagttaaaggaaatattttagaatgctca 288  Q
    ||||||| ||||||||||||| || |||| |||||||||||||||    
T  6299 tatacaaaggttatacaagttgaaagaaacattttagaatgctca 6343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 19 - 47
Target Start/End: Original strand, 38582 - 38610
Alignment:
Q  19 aacctgtgtatatctacatacaactcaac 47  Q
    |||||||||||||||||||||||||||||    
T  38582 aacctgtgtatatctacatacaactcaac 38610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 29; Significance: 0.0000008; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 19 - 47
Target Start/End: Complemental strand, 30141 - 30113
Alignment:
Q  19 aacctgtgtatatctacatacaactcaac 47  Q
    |||||||||||||||||||||||||||||    
T  30141 aacctgtgtatatctacatacaactcaac 30113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 19 - 47
Target Start/End: Complemental strand, 35542 - 35514
Alignment:
Q  19 aacctgtgtatatctacatacaactcaac 47  Q
    |||||||||||||||||||||||||||||    
T  35542 aacctgtgtatatctacatacaactcaac 35514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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