View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0356_low_4 (Length: 431)
Name: NF0356_low_4
Description: NF0356
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0356_low_4 |
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Alignment Details
Target: chr7 (Bit Score: 394; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 394; E-Value: 0
Query Start/End: Original strand, 10 - 411
Target Start/End: Complemental strand, 25302463 - 25302062
Alignment:
| Q |
10 |
agatgaaggagagagaactcaatgatgaattggctaaggttcatgagagtatggcggcgccaccggttcttgacaatgttagaagccatggaagagtgtg |
109 |
Q |
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| T |
25302463 |
agatgaaggagagagaactaaatgatgaattggctaaggttcatgagagtatggcggcgccaccggttcttgacaatgttagaagccatggaagagtgtg |
25302364 |
T |
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| Q |
110 |
tttgagtaggtcattcatggcagaagagggtacagtttctagttcattcaaggaaacattggagaatttggtgacaaatgctgatgctttgaggactgag |
209 |
Q |
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| T |
25302363 |
tttgagtaggtcattcatggcagaagagggtacagtttctagttcattcaaggaaacattggagaatttggtgacaaatgctgatgctttgaggactgag |
25302264 |
T |
|
| Q |
210 |
acagctttgagagttgtgcagatactgaaaccagctcaggttctcaacttttttgttgctgttgctgagcttcagctcaaggttaggtctttgggttttg |
309 |
Q |
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| T |
25302263 |
acagctttgagagttgtgcagatactgaaaccagctcaggttctcaacttttttgttgctgttgctgagcttcagctcaaggttaggtctttgggttttg |
25302164 |
T |
|
| Q |
310 |
ataaggatgctcaaagggaaaaccaagggtgaatgaatcatgggaaatttaaggtggtttggttttccttctgtaatacatagggtttagcagtgatgat |
409 |
Q |
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||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25302163 |
ataaggatgctcagagggaaaaccaagggtgaatgaatcatgggaaatttaaggtggtttggttttccttctgtaatacatagggtttagcagtgatgat |
25302064 |
T |
|
| Q |
410 |
gt |
411 |
Q |
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|| |
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| T |
25302063 |
gt |
25302062 |
T |
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